1. Artificial Neural Networks for Automated Cell Quantification in Lensless LED Imaging Systems
- Author
-
Andreas Waag, Karsten Hiller, Agus Budi Dharmawan, Hutomo Suryo Wasisto, Igi Ardiyanto, Jana Hartmann, Gregor Scholz, Joan Daniel Prades, Sunu Wibirama, Philipp Hörmann, and Shinta Mariana
- Subjects
Microscope ,principal component analysis ,Computer science ,Reference data (financial markets) ,Holography ,lcsh:A ,02 engineering and technology ,01 natural sciences ,law.invention ,cell counting ,law ,lensless holographic microscopy ,0103 physical sciences ,Microscopy ,010302 applied physics ,Artificial neural network ,business.industry ,Pattern recognition ,021001 nanoscience & nanotechnology ,Feature (computer vision) ,Principal component analysis ,Artificial intelligence ,lcsh:General Works ,0210 nano-technology ,business ,artificial neural networks ,Feature learning - Abstract
Cell registration by artificial neural networks (ANNs) in combination with principal component analysis (PCA) has been demonstrated for cell images acquired by light emitting diode (LED)-based compact holographic microscopy. In this approach, principal component analysis was used to find the feature values from cells and background, which would be subsequently employed as neural inputs into the artificial neural networks. Image datasets were acquired from multiple cell cultures using a lensless microscope, where the reference data was generated by a manually analyzed recording. To evaluate the developed automatic cell counter, the trained system was assessed on different data sets to detect immortalized mouse astrocytes, exhibiting a detection accuracy of ~81% compared with manual analysis. The results show that the feature values from principal component analysis and feature learning by artificial neural networks are able to provide an automatic approach on the cell detection and registration in lensless holographic imaging.
- Published
- 2018