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Across taxa, it is generally accepted that there are fitness advantages to rapid growth early in life. For stream-dwelling salmonids, however, high temperatures and associated energetic costs during the summer growing season might offset or even prevent the competitive advantage of large body size. Our overall objective was to understand the relative importance of factors that can cause variation in growth rates in an age-0 cohort of wild steelhead (Oncorhynchus mykiss) in Idaho, USA, where temperatures approach, and temporarily exceed, their tolerance level. For individually tagged fish inhabiting the same stream reach, we found that growth rates were negatively related to fish mass (slopes of the two best approximating models were both −0.024). Comparing growth rates from 16 different stream reaches throughout the watershed, we found that temperature-induced metabolic cost was the single best approximating model (AIC wi = 1.0) of the variation in individual growth rates. The bioenergetic model showed that mass-specific metabolic costs decreased with mass, but the absolute energetic demands increased over the same size range. Because temperature had a multiplicative effect on metabolic cost, our results suggest that the effect of food limitation increased with fish size. We conclude that high water temperatures pose energetic bottlenecks and can be a potentially strong mechanism limiting growth in juvenile salmonids in summer, particularly as streams in the region experience warming trends.