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Despite the importance of seed dispersal in a plant's life cycle, global patterns in seed dispersal distance have seldom been studied. This paper presents the first geographically and taxonomically broad quantification of the latitudinal gradient in seed dispersal distance. Although there is substantial variation in the seed dispersal distances of different species at a given latitude, seeds disperse on average more than an order of magnitude further at the equator than towards the poles. This pattern is partially explained by plant life‐history traits that simultaneously associate with seed dispersal distance and latitude, including dispersal mode and plant height. The extended seed shadow of tropical plants could increase the distance between conspecific individuals. This could facilitate species coexistence and contribute to the maintenance of high plant diversity in tropical communities. The latitudinal gradient in dispersal distance also has implications for species' persistence in the face of habitat fragmentation and climate change. [ABSTRACT FROM AUTHOR]

Identifying efficient biodiversity indicators is a key pillar of the global conservation strategy. Top predators have been proposed as reliable biodiversity signposts, but their role is controversial. Here, we verified their performance by a meta‐analysis of published studies and found solid support for their efficacy as biodiversity indicators. As to be expected for any indicator species, efficacy was stronger for biodiversity components 'ecologically closer' to the predator (i.e. broad groups that include species providing key resources, such as avian and tree diversity for a bird‐eating predator that nests in trees) and declined for the diversity of components more 'ecologically remote' from the predator (e.g. butterfly diversity for a fish‐eating predator). This confirmed a link between the top predatory role and biodiversity and set the context for its functionality. These results show that, on average, top predators are justified candidates as biodiversity indicators and that prioritisation of conservation action based on their occurrence is likely to provide broader ecosystem benefits. However, such role should be confirmed on a case‐by‐case basis, acknowledging that no indicator can portray everything, checking the compatibility of the biodiversity components linked to the predator with the established conservation objectives and ideally integrating predators with other complementary indicator groups. [ABSTRACT FROM AUTHOR]

This paper compares responses to environmental stress of the ecophysiological traits of organisms in the detrital soil food webs of grasslands in the Netherlands, using the relationship between average body massMand numerical abundanceN. The microbial biomass and biodiversity of belowground fauna were measured in 110 grasslands on sand, 85 of them farmed under organic, conventional and intensive management. Bacterial cell volume and abundance and electrophoretic DNA bands as well as bacterial activity in the form of either metabolic quotient (qCO2) or microbial quotient (Cmic/Corg) predicted the response of microorganisms to stress. For soil fauna, the logarithm of body mass log(M) was approximately linearly related to the logarithm of numerical abundance log(N) with slope near−1, and the regression slope and the proportion of predatory species were lower in intensive agroecosystems (more reduced substrates with higher energy content). Linear regression of log(N) on log(M) had slope not far from−3/4. The approach to monitoring data illustrated in this paper could be useful in assessing land-use quality. [ABSTRACT FROM AUTHOR]

Spatial aggregation of competitors over resource patches is generally accepted as an important mechanism maintaining coexistence of species in insect communities exploiting fragmented resources. However, its quantitative effects on local diversity, i.e. the relationship between the degree of aggregation in a community and community diversity, remain unexplored. In this paper, we tested whether stronger spatial aggregation does lead to the predicted higher local diversity. We compared six species-rich Drosophila communities exploiting decaying fruits in central Panama, monitored over one full year (> 25 generations). We found a clear positive relationship between the overall degree of aggregation and community diversity. In addition, aggregation over fruit trees was found to contribute greatly to the overall degree of aggregation and was largely responsible for the observed relationship between aggregation and diversity across communities. In addition, both diversity and aggregation strength were lower in communities in disturbed habitats, which was explained by altered spatial distribution of fruiting trees. This study shows that the aggregation model cannot only explain coexistence, but also differences in local diversity. [ABSTRACT FROM AUTHOR]

Although invasive plants are a major source of terrestrial ecosystem degradation worldwide, it remains unclear which trophic levels above the base of the food web are most vulnerable to plant invasions. We performed a meta-analysis of 38 independent studies from 32 papers to examine how invasive plants alter major groupings of primary and secondary consumers in three globally distributed ecosystems: wetlands, woodlands and grasslands. Within each ecosystem we examined if green (grazing) food webs are more sensitive to plant invasions compared to brown (detrital) food webs. Invasive plants have strong negative effects on primary consumers (detritivores, bacterivores, fungivores, and/or herbivores) in woodlands and wetlands, which become less abundant in both green and brown food webs in woodlands and green webs in wetlands. Plant invasions increased abundances of secondary consumers (predators and/or parasitoids) only in woodland brown food webs and green webs in wetlands. Effects of invasive plants on grazing and detrital food webs clearly differed between ecosystems. Overall, invasive plants had the most pronounced effects on the trophic structure of wetlands and woodlands, but caused no detectable changes to grassland trophic structure. [ABSTRACT FROM AUTHOR]

The biodiversity-ecosystem functioning (BEF) relationship is central in community ecology. Its drivers in competitive systems (sampling effect and functional complementarity) are intuitive and elegant, but we lack an integrative understanding of these drivers in complex ecosystems. Because networks encompass two key components of the BEF relationship (species richness and biomass flow), they provide a key to identify these drivers, assuming that we have a meaningful measure of functional complementarity. In a network, diversity can be defined by species richness, the number of trophic levels, but perhaps more importantly, the diversity of interactions. In this paper, we define the concept of trophic complementarity (TC), which emerges through exploitative and apparent competition processes, and study its contribution to ecosystem functioning. Using a model of trophic community dynamics, we show that TC predicts various measures of ecosystem functioning, and generate a range of testable predictions. We find that, in addition to the number of species, the structure of their interactions needs to be accounted for to predict ecosystem productivity. [ABSTRACT FROM AUTHOR]

Two major international initiatives – the Convention on Biological Diversity's target to reduce the rate of biodiversity loss by 2010, and the Millennium Ecosystem Assessment – raise the profile of ecological data on the changing state of nature and its implications for human well-being. This paper is intended to provide a broad overview of current knowledge of these issues. Information on changes in the status of species, size of populations, and extent and condition of habitats is patchy, with little data available for many of the taxa, regions and habitats of greatest importance to the delivery of ecosystem services. However, what we do know strongly suggests that, while exceptions exist, the changes currently underway are for the most part negative, anthropogenic in origin, ominously large and accelerating. The impacts of these changes on human society are idiosyncratic and patchily understood, but for the most part also appear to be negative and substantial. Forecasting future changes is limited by our poor understanding of the cascading impacts of change within communities, of threshold effects, of interactions between the drivers of change, and of linkages between the state of nature and human well-being. In assessing future science needs, we not only see a strong role for ecological data and theory, but also believe that much closer collaboration with social and earth system scientists is essential if ecology is to have a strong bearing on policy makers. [ABSTRACT FROM AUTHOR]

The mid-domain effect (MDE) aims to explain spatial patterns in species richness invoking only stochasticity and geometrical constraints. In this paper, we used simulations to show that its main qualitative prediction, a hump-shaped pattern in species richness, converges to the expectation of a spatially bounded neutral model when communities are linked by short-distance migration. As these two models can be linked under specific situations, neutral theory may provide a mechanistic population level basis for MDE. This link also allows establishing in which situations MDE patterns are more likely to be found. Also, in this situation, MDE models could be used as a first approximation to understand the role of both stochastic (ecological drift and migration) and deterministic (adaptation to environmental conditions) processes driving the spatial structure of species richness. [ABSTRACT FROM AUTHOR]

In this paper, we introduce the concept of‘originality of a species within a set’ in order to indicate the average rarity of all the features belonging to this species. Using a phylogenetic tree of 70 species of New World terrestrial Carnivora, we suggest measuring the originality by a probability distribution. This maximizes the expected number of features shared by two species randomly drawn from the set. By using this new index, we take account of branch lengths whereas current indices of originality focus on tree topology. As a supplement to Nee and May's optimizing algorithm, we find that originality must be one of the criteria used in conservation planning. [ABSTRACT FROM AUTHOR]

As part of an overall “biodiversity crisis” many amphibian populations are in decline throughout the world. Numerous causes have been invoked to explain these declines. These include habitat destruction, climate change, increasing levels of ultraviolet radiation, environmental contamination, disease, and the introduction of non-native species. In this paper, we argue that amphibian population declines are caused by different abiotic and biotic factors acting together in a context-dependent fashion. Moreover, different species and different populations of the same species may react in different ways to the same environmental insult. Thus, the causes of amphibian population declines will vary spatially and temporally. Although some generalizations (e.g. those concerning environmental stress and disease outbreaks) can be made about amphibian population declines, we suggest that these generalizations take into account the context-dependent dynamics of ecological systems. [ABSTRACT FROM AUTHOR]

This paper stresses that the mechanism of coexistence is the key to understanding the relationship between species richness and community productivity. Using model plant communities, we explored two general kinds of mechanisms based on resource heterogeneity and recruitment limitation, with and without any trade-off between reproductive and competitive abilities. We generated different levels of species richness by changing model parameters, in particular the number of species in the regional pool, the degree of recruitment limitation, and the level of heterogeneity. Different diversity–productivity patterns are obtained with different coexistence mechanisms, indicating there is no reason to expect any general relationship between species richness and productivity. We discuss these results in the context of the within-site and across-site aspects of the relationship between species richness and productivity. Furthermore, we extend these results to hypothesize the relationship between species richness and productivity for other coexistence mechanisms not explicitly considered here. [ABSTRACT FROM AUTHOR]

In contradiction with field observations, theory predicts that the number of coexisting plankton species at equilibrium cannot exceed the number of limiting resources, which is called the “paradox of the plankton”. Recently, Huisman & Weissing (1999, 2000) showed, in a model study, that the number of coexisting species may exceed the number of limiting resources when internal system feedback induces oscillations or chaos. In this paper, we use the term “supersaturated coexistence” for this phenomenon. On the basis of these findings, they claimed that the paradox of the plankton is solved. We investigated the prerequisites for supersaturated coexistence in the same model. Our results indicate that supersaturated coexistence is a rare phenomenon in parameter space, requires a very precise parameterization of the community members and is sensitive to the introduction of new species and the removal of the present species. This raises the question of whether supersaturated coexistence is likely to occur in nature. We conclude that the claim by Huisman & Weissing (1999, 2000) is premature. [ABSTRACT FROM AUTHOR]

The species‐energy hypothesis predicts increasing biodiversity with increasing energy in ecosystems. Proxies for energy availability are often grouped into ambient energy (i.e., solar radiation) and substrate energy (i.e., non‐structural carbohydrates or nutritional content). The relative importance of substrate energy is thought to decrease with increasing trophic level from primary consumers to predators, with reciprocal effects of ambient energy. Yet, empirical tests are lacking. We compiled data on 332,557 deadwood‐inhabiting beetles of 901 species reared from wood of 49 tree species across Europe. Using host‐phylogeny‐controlled models, we show that the relative importance of substrate energy versus ambient energy decreases with increasing trophic levels: the diversity of zoophagous and mycetophagous beetles was determined by ambient energy, while non‐structural carbohydrate content in woody tissues determined that of xylophagous beetles. Our study thus overall supports the species‐energy hypothesis and specifies that the relative importance of ambient temperature increases with increasing trophic level with opposite effects for substrate energy. [ABSTRACT FROM AUTHOR]

Positive effects of habitat patch size on biodiversity are often extrapolated to infer negative effects of habitat fragmentation on biodiversity at landscape scales. However, such cross‐scale extrapolations typically fail. A recent, landmark, patch‐scale analysis (Chase et al., 2020, Nature 584, 238–243) demonstrates positive patch size effects on biodiversity, that is, 'ecosystem decay' in small patches. Other authors have already extrapolated this result to infer negative fragmentation effects, that is, higher biodiversity in a few large than many small patches of the same cumulative habitat area. We test whether this extrapolation is valid. We find that landscape‐scale patterns are opposite to their analogous patch‐scale patterns: for sets of patches with equal total habitat area, species richness and evenness decrease with increasing mean size of the patches comprising that area, even when considering only species of conservation concern. Preserving small habitat patches will, therefore, be key to sustain biodiversity amidst ongoing environmental crises. [ABSTRACT FROM AUTHOR]

Marine microbial communities are extremely complex and diverse. The number of locally coexisting species often vastly exceeds the number of identifiable niches, and taxonomic composition often appears decoupled from local environmental conditions. This is contrary to the view that environmental conditions should select for a few locally well‐adapted species. Here we use an individual‐based eco‐evolutionary model to show that virtually unlimited taxonomic diversity can be supported in highly evolving assemblages, even in the absence of niche separation. With a steady stream of heritable changes to phenotype, competitive exclusion may be weakened, allowing sustained coexistence of nearly neutral phenotypes with highly divergent lineages. This behaviour is robust even to abrupt environmental perturbations that might be expected to cause strong selection pressure and an associated loss of diversity. We, therefore, suggest that rapid evolution and individual‐level variability are key drivers of species coexistence and maintenance of microbial biodiversity. [ABSTRACT FROM AUTHOR]

Ecological restoration projects often have variable and unpredictable outcomes, and these can limit the overall impact on biodiversity. Previous syntheses have investigated restoration effectiveness by comparing average restored conditions to average conditions in unrestored or reference systems. Here, we provide the first quantification of the extent to which restoration affects both the mean and variability of biodiversity outcomes, through a global meta‐analysis of 83 terrestrial restoration studies. We found that, relative to unrestored (degraded) sites, restoration actions increased biodiversity by an average of 20%, while decreasing the variability of biodiversity (quantified by the coefficient of variation) by an average of 14%. As restorations aged, mean biodiversity increased and variability decreased relative to unrestored sites. However, restoration sites remained, on average, 13% below the biodiversity of reference (target) ecosystems, and were characterised by higher (20%) variability. The lower mean and higher variability in biodiversity at restored sites relative to reference sites remained consistent over time, suggesting that sources of variation (e.g. prior land use, restoration practices) have an enduring influence on restoration outcomes. Our results point to the need for new research confronting the causes of variability in restoration outcomes, and close variability and biodiversity gaps between restored and reference conditions. [ABSTRACT FROM AUTHOR]

Organic farming supports higher biodiversity than conventional farming, but at the cost of lower yields. We conducted a meta‐analysis quantifying the trade‐off between biodiversity and yield, comparing conventional and organic farming. We developed a compatibility index to assess whether biodiversity gains from organic farming exceed yield losses, and a substitution index to assess whether organic farming would increase biodiversity in an area if maintaining total production under organic farming would require cultivating more land at the expense of nature. Overall, organic farming had 23% gain in biodiversity with a similar cost of yield decline. Biodiversity gain is negatively correlated to yield loss for microbes and plants, but no correlation was found for other taxa. The biodiversity and yield trade‐off varies under different contexts of organic farming. The overall compatibility index value was close to zero, with negative values for cereal crops, positive for non‐cereal crops, and varies across taxa. Our results indicate that, on average, the proportion of biodiversity gain is similar to the proportion of yield loss for paired field studies. For some taxa in non‐cereal crops, switching to organic farming can lead to a biodiversity gain without yield loss. We calculated the overall value of substitution index and further discussed the application of this index to evaluate when the biodiversity of less intensified farming system is advantageous. [ABSTRACT FROM AUTHOR]

All organisms must simultaneously tolerate the environment and access limiting resources if they are to persist. Approaches to understanding abiotic filtering and competitive interactions have generally been developed independently. Consequently, integrating those factors to predict species abundances and community structure remains an unresolved challenge. We introduce a new synthetic framework that models both abiotic filtering and competition by using functional traits. First, our framework estimates species carrying capacities along abiotic gradients. Second, it estimates pairwise competitive interactions as a function of species trait differences. Applied to the study of a complex wetland community, our combined approach more than doubles the explained variance of species abundances compared to a model of abiotic tolerances alone. Trait‐based integration of competitive interactions and abiotic filtering improves our ability to predict species abundances, bringing us closer to more accurate predictions of biodiversity structure in a changing world. [ABSTRACT FROM AUTHOR]

Elevational and latitudinal gradients in species diversity may be mediated by biotic interactions that cause density‐dependent effects of conspecifics on survival or growth to differ from effects of heterospecifics (i.e. conspecific density dependence), but limited evidence exists to support this. We tested the hypothesis that conspecific density dependence varies with elevation using over 40 years of data on tree survival and growth from 23 old‐growth temperate forest stands across a 1,000‐m elevation gradient. We found that conspecific‐density‐dependent effects on survival of small‐to‐intermediate‐sized focal trees were negative in lower elevation, higher diversity forest stands typically characterised by warmer temperatures and greater relative humidity. Conspecific‐density‐dependent effects on survival were less negative in higher elevation stands and ridges than in lower elevation stands and valley bottoms for small‐to‐intermediate‐sized trees, but were neutral for larger trees across elevations. Conspecific‐density‐dependent effects on growth were negative across all tree size classes and elevations. These findings reveal fundamental differences in biotic interactions that may contribute to relationships between species diversity, elevation and climate. [ABSTRACT FROM AUTHOR]

Explicit characterisation of the complexity of urban landscapes is critical for understanding patterns of biodiversity and for detecting the underlying social and ecological processes that shape them. Urban environments exhibit variable heterogeneity and connectivity, influenced by different historical contingencies, that affect community assembly across scales. The multidimensional nature of urban disturbance and co‐occurrence of multiple stressors can cause synergistic effects leading to nonlinear responses in populations and communities. Yet, current research design of urban ecology and evolutionary studies typically relies on simple representation of the parameter space that can be observed. Sampling approaches apply simple urban gradients such as linear transects in space or comparisons of urban sites across the urban mosaic accounting for a few variables. This rarely considers multiple dimensions and scales of biodiversity, and proves to be inadequate to explain observed patterns. We apply a multidimensional approach that integrates distinctive social, ecological and built characteristics of urban landscapes, representing variations along dimensions of heterogeneity, connectivity and historical contingency. Measuring species richness and beta diversity across 100 US metropolitan areas at the city and 1‐km scales, we show that distinctive signatures of urban biodiversity can result from interactions between socioecological heterogeneity and connectivity, mediated by historical contingency. [ABSTRACT FROM AUTHOR]

Three decades of research have demonstrated that biodiversity can promote the functioning of ecosystems. Yet, it is unclear whether the positive effects of biodiversity on ecosystem functioning will persist under various types of global environmental change drivers. We conducted a meta‐analysis of 46 factorial experiments manipulating both species richness and the environment to test how global change drivers (i.e. warming, drought, nutrient addition or CO2 enrichment) modulated the effect of biodiversity on multiple ecosystem functions across three taxonomic groups (microbes, phytoplankton and plants). We found that biodiversity increased ecosystem functioning in both ambient and manipulated environments, but often not to the same degree. In particular, biodiversity effects on ecosystem functioning were larger in stressful environments induced by global change drivers, indicating that high‐diversity communities were more resistant to environmental change. Using a subset of studies, we also found that the positive effects of biodiversity were mainly driven by interspecific complementarity and that these effects increased over time in both ambient and manipulated environments. Our findings support biodiversity conservation as a key strategy for sustainable ecosystem management in the face of global environmental change. [ABSTRACT FROM AUTHOR]

The unsustainable harvest of wildlife is a major threat to global biodiversity and to the millions of people who depend on wildlife for food and income. Past research has called attention to the fact that commonly used methods to evaluate the sustainability of wildlife hunting perform poorly, yet these methods remain in popular use today. Here, we conduct a systematic review of empirical sustainability assessments to quantify the use of sustainability indicators in the scientific literature and highlight associations between analytical methods and their outcomes. We find that indicator type, continent of study, species body mass, taxonomic group and socio-economic status of study site are important predictors of the probability of reported sustainability. The most common measures of sustainability include population growth models, the Robinson & Redford (1991) model and population trends through time. Indicators relying on population-specific biological data are most often used in North America and Europe, while cruder estimates are more often used in Africa, Latin America and Oceania. Our results highlight both the uncertainty and lack of uniformity in sustainability science. Given our urgent need to conserve both wildlife and the food security of rural peoples around the world, improvements in sustainability indicators are of utmost importance. [ABSTRACT FROM AUTHOR]

For decades, people have reduced the transmission of pathogens by adding low‐quality hosts to managed environments like agricultural fields. More recently, there has been interest in whether similar 'dilution effects' occur in natural disease systems, and whether these effects are eroded as diversity declines. For some pathogens of plants, humans and other animals, the highest‐quality hosts persist when diversity is lost, so that high‐quality hosts dominate low‐diversity communities, resulting in greater pathogen transmission. Meta‐analyses reveal that these natural dilution effects are common. However, studying them remains challenging due to limitations on the ability of researchers to manipulate many disease systems experimentally, difficulties of acquiring data on host quality and confusion about what should and should not be considered a dilution effect. Because dilution effects are widely used in managed disease systems and have been documented in a variety of natural disease systems, their existence should not be considered controversial. Important questions remain about how frequently they occur and under what conditions to expect them. There is also ongoing confusion about their relationships to both pathogen spillover and general biogeographical correlations between diversity and disease, which has resulted in an inconsistent and confusing literature. Progress will require rigorous and creative research. [ABSTRACT FROM AUTHOR]

The effects of altered nutrient supplies and herbivore density on species diversity vary with spatial scale, because coexistence mechanisms are scale dependent. This scale dependence may alter the shape of the species–area relationship (SAR), which can be described by changes in species richness (S) as a power function of the sample area (A): S = cAz, where c and z are constants. We analysed the effects of experimental manipulations of nutrient supply and herbivore density on species richness across a range of scales (0.01–75 m2) at 30 grasslands in 10 countries. We found that nutrient addition reduced the number of species that could co‐occur locally, indicated by the SAR intercepts (log c), but did not affect the SAR slopes (z). As a result, proportional species loss due to nutrient enrichment was largely unchanged across sampling scales, whereas total species loss increased over threefold across our range of sampling scales. [ABSTRACT FROM AUTHOR]

Despite much recent progress, our understanding of diversity–stability relationships across different study systems remains incomplete. In particular, recent theory clarified that within‐species population stability and among‐species asynchronous population dynamics combine to determine ecosystem temporal stability, but their relative importance in modulating diversity‐ecosystem temporal stability relationships in different ecosystems remains unclear. We addressed this issue with a meta‐analysis of empirical studies of ecosystem and population temporal stability in relation to species diversity across a range of taxa and ecosystems. We show that ecosystem temporal stability tended to increase with species diversity, regardless of study systems. Increasing diversity promoted asynchrony, which, in turn, contributed to increased ecosystem stability. The positive diversity–ecosystem stability relationship persisted even after accounting for the influences of environmental covariates (e.g., precipitation and nutrient input). By contrast, species diversity tended to reduce population temporal stability in terrestrial systems but increase population temporal stability in aquatic systems, suggesting that asynchronous dynamics among species are essential for stabilizing diverse terrestrial ecosystems. We conclude that there is compelling empirical evidence for a general positive relationship between species diversity and ecosystem‐level temporal stability, but the contrasting diversity–population temporal stability relationships between terrestrial and aquatic systems call for more investigations into their underlying mechanisms. [ABSTRACT FROM AUTHOR]

We investigate relationships between life history traits and the character of population dynamics as revealed by time series data. Our classification of time series is according to 'extinction category,' where we identify three classes of populations: (i) weakly varying populations with such high growth rates that long-term persistence is likely (unless some extreme catastrophe occurs); (ii) populations with such low growth rates that average population size must be large to buffer them against extinction in a variable environment; and (iii) highly variable populations that fluctuate so dramatically that dispersal or some other refuge mechanism is likely to be key to their avoidance of extinction. Using 1941 time series representing 758 species from the Global Population Dynamics Database, we find that, depending on the form of density dependence one assumes, between 46 and 90% of species exhibit dynamics that are so variable that even large carrying capacities could not buffer them against extinction on a 100-year time horizon. The fact that such a large proportion of population dynamics are so locally variable vindicates the growing realization that dispersal, habitat connectedness, and large-scale processes are key to local persistence. Furthermore, for mammals, simply by knowing body size, age at first reproduction, and average number of offspring we could correctly predict extinction categories for 83% of species (60 of 72). [ABSTRACT FROM AUTHOR]

Marine reserves hold promise for maintaining biodiversity and sustainable fishery management, but studies supporting them have not addressed a crucial aspect of sustainability: the reduction in viability of populations with planktonic larvae dispersing along a coastal habitat with noncontiguous marine reserves. We show how sustainability depends on the fraction of natural larval settlement (FNLS) remaining after reserves are implemented, which in turn depends on reserve configuration and larval dispersal distance. Sustainability requires FNLS to be greater than an empir-ically determined minimum. Maintaining an adequate value for all species requires either a large, unlikely fraction (> 35%) of coastline in reserves, or reserves that are larger than the mean larval dispersal distance of the target species. FNLS is greater for species dispersing shorter distances, which implies reserves can lead to: (1) changes in community composition and (2) genetic selection for shorter dispersal distance. Dependence of sustainability on dispersal distance is a new source of uncertainty. [ABSTRACT FROM AUTHOR]

The effect of biodiversity on natural communities has recently emerged as a topic of considerable ecological interest. We review studies that explicitly test whether the number of species in a community (species richness) regulates the temporal variability of aggregate community (total biomass, productivity, nutrient cycling) and population (density, biomass) properties. Theoretical studies predict that community variability should decline with increasing species richness, while population variability should increase. Many, but not all, empirical studies support these expectations. However, a closer look reveals that several empirical studies have either imperfect experimental designs or biased methods of calculating variability. Furthermore, most theoretical studies rely on highly unrealistic assumptions. We conclude that evidence to support the claim that biodiversity regulates temporal variability is accumulating, but not unequivocal. More research, in a broader array of ecosystem types and with careful attention to methodological considerations, is needed before we can make definitive statements regarding richness-variability relationships. [ABSTRACT FROM AUTHOR]

While many dynamic processes have been proposed to produce diversity differences among communities, most empirical investigations focus on static system attributes. An ideal analysis would consider multiple dynamic processes and their impact on many community members, but such analyses can be logistically daunting. I compared Markov chain models of ecological communities to explore general processes leading to diversity differences of sessile species between coral reefs and rocky intertidal mussel beds. As predicted by diversity theory, high diversity coral reefs had lower species replacement probabilities and higher disturbance rates than did lower diversity mussel beds. Intransitivities in species replacements, recruitment limitation and responses to perturbing species from equilibrium (Jacobian elements) did not differ significantly between systems. Tradeoffs between the displacement risk or displacement ability of a species and either disturbance risk or colonising ability were not apparent. Manipulating the coral reef model to eliminate disturbance or intransitivities caused declines in species diversity, whereas removing recruitment limitation or increasing the probability of interspecific replacement did not. Higher overall disturbance levels can explain part of the diversity difference between systems, but much remained unexplained, indicating that details of the pattern and strengths of species interactions were probably extremely important. [ABSTRACT FROM AUTHOR]

We have examined the effects of herbivore diversity on parasitoid community persistence and stability, mediated by nonspecific information from herbivore-infested plants. First, we investigated host location and patch time allocation in the parasitoid Cotesia glomerata in environments where host and/or nonhost herbivores were present on Brassica oleracea leaves. Parasitoids were attracted by infochemicals from leaves containing nonhost herbivores. They spent considerable amounts of time on such leaves. Thus, when information from the plant is indistinct, herbivore diversity is likely to weaken interaction strengths between parasitoids and hosts. In four B. oleracea fields, all plants contained herbivores, often two or more species. We modelled parasitoid–herbivore communities increasing in complexity, based on our experiments and field data. Increasing herbivore diversity promoted the persistence of parasitoid communities. However, at a higher threshold of herbivore diversity, parasitoids became extinct due to insufficient parasitism rates. Thus, diversity can potentially drive both persistence and extinctions. [ABSTRACT FROM AUTHOR]

Minimum complementary sets of sites that represent each species at least once have been argued to provide a nominal core reserve network and the starting point for regional conservation programs. However, this approach may be inadequate if there is a tendency to represent several species at marginal areas within their ranges, which may occur if high efficiency results from preferential selection of sites in areas of ecological transition. Here we use data on the distributions of birds in South Africa and Lesotho to explore this idea. We found that for five measures that are expected to reflect the location of areas of ecological transition, complementary sets tend to select higher values of these measures than expected by chance. We recommend that methods for the identification of priority areas for conservation that incorporate viability concerns be preferred to minimum representation sets, even if this results in more costly reserve networks. [ABSTRACT FROM AUTHOR]

Ecological theory recognizes the importance of the variety of species for maintaining the functioning of ecosystems and their derived services. We assert that when studying the effects of shifts in biodiversity levels using mathematical models, their dynamics must be sensitive to the variety of species traits but not to raw species numbers, a property that we call order–invariance. We present a testing procedure for verifying order–invariance of ecological network models —with or without trait adaptation— expressed as ODEs. Furthermore, we applied our test to several influential models used for evaluating biodiversity effects on ecosystem functioning. In most of the surveyed studies the equations failed our test. This raises doubts about the validity of previous results and calls for revisiting the theory derived from these studies. Our results foster the creation of artifact–free models, a necessary step towards building a more robust theory of biodiversity–driven ecosystem functioning. [ABSTRACT FROM AUTHOR]

We examine several features of Hubbell’s nonequilibrium, or “null”, model of tree dynamics, which holds that species-rich tropical tree communities are maintained on a local scale by a balance of extinction and immigration, and on a global scale by a balance of extinction and speciation. All species are held to be ecologically equivalent, such that species having equal initial abundances have equal probabilities of extinction or fixation. We show here that the null model is not robust to relaxation of the assumption of ecological equivalence. Recently, Zhang & Lin (1997; J. Theor. Biol. 188: 361–367) showed that persistence times decrease when unequal colonization rates are allowed, but their results still permit very long persistence times in stands of hundreds of thousands of stems or more. We extend their work by allowing tree mortality rates to differ across species, as is seen in all natural tree communities. As a result, persistence times drop dramatically, and forest composition becomes highly deterministic, such that long-lived species drop out of the community much more slowly than short-lived species. We also note that the use of tree deaths (instead of years) as a measure of time inflates estimates of persistence times. In summary, calculated persistence times of tropical tree species, even those in very large stands, no longer reach time scales plausible for speciation. [ABSTRACT FROM AUTHOR]

We develop a multispecies plant-herbivore model to explore how plant competition for light and the selectivity of herbivores affect abundance patterns of plants and herbivores along productivity gradients. The model considers a small and a tall plant species, a generalist herbivore, and a selective herbivore. The selective herbivore feeds only on the small plant species. In the absence of the generalist herbivore, the tall plant species becomes increasingly dominant with increasing productivity, and the small plant and its selective herbivore disappear. The model shows that generalist herbivores can facilitate selective herbivores by suppressing competition for light. This favours the small plant species, and thereby the selective herbivores. The model predictions are qualitatively consistent with field studies of multispecies plant-herbivore systems. [ABSTRACT FROM AUTHOR]

Ecological communities typically contain more species when located within geologically older regions. This pattern is traditionally attributed to the long‐term accumulation of species in the regional species pool, with local species interactions playing a minor role. We provide evidence suggesting a more important role of local species interactions than generally assumed. We assembled 320 communities of root‐associated fungi under 80 species pools, varying species pool richness and the mean age of the sites from which the fungi were collected across a 4‐myr soil chronosequence. We found that local diversity increased more with increasing species pool richness when species were from older sites. We also found that older species pools had lower functional and phylogenetic diversity, indicating greater competitive equivalence among species. Our results suggest that older regions have higher local richness not simply because older pools are more speciose but also because species have evolved traits that allow them to locally co‐occur. [ABSTRACT FROM AUTHOR]

Biodiversity studies are sensitive to well‐recognised temporal and spatial scale dependencies. Cross‐study syntheses may inflate these influences by collating studies that vary widely in the numbers and sizes of sampling plots. Here we evaluate sources of inaccuracy and imprecision in study‐level and cross‐study estimates of biodiversity differences, caused by within‐study grain and sample sizes, biodiversity measure, and choice of effect‐size metric. Samples from simulated communities of old‐growth and secondary forests demonstrated influences of all these parameters on the accuracy and precision of cross‐study effect sizes. In cross‐study synthesis by formal meta‐analysis, the metric of log response ratio applied to measures of species richness yielded better accuracy than the commonly used Hedges' g metric on species density, which dangerously combined higher precision with persistent bias. Full‐data analyses of the raw plot‐scale data using multilevel models were also susceptible to scale‐dependent bias. We demonstrate the challenge of detecting scale dependence in cross‐study synthesis, due to ubiquitous covariation between replication, variance and plot size. We propose solutions for diagnosing and minimising bias. We urge that empirical studies publish raw data to allow evaluation of covariation in cross‐study syntheses, and we recommend against using Hedges' g in biodiversity meta‐analyses. [ABSTRACT FROM AUTHOR]

Biodiversity loss and climate change are often considered as intertwined issues. However, they do not receive equal attention. Even in the context of nature‐based climate solutions, which consider ecosystems to be crucial to mitigate and adapt to the impacts of climate change, the potential role of biodiversity has received little attention. Here this essay emphasizes biodiversity as the cause—not only the consequence—to help society and nature face challenges associated with the changing climate. Reconsidering and emphasizing the linkages between these twin environmental crises is urgently needed to make collective efforts for the environment truly effective. [ABSTRACT FROM AUTHOR]

Seed dispersal limitation, which can be exacerbated by a number of anthropogenic causes, can result in local communities having fewer species than they might potentially support, representing a potential diversity deficit. The link between processes that shape natural variation in diversity, such as dispersal limitation, and the consequent effects on productivity is less well known. Here, we synthesised data from 12 seed addition experiments in grassland communities to examine the influence of reducing seed dispersal limitation (from 1 to 60 species added across experiments) on species richness and productivity. For every 10 species of seed added, we found that species richness increased by about two species. However, the increase in species richness by overcoming seed limitation did not lead to a concomitant increase in above‐ground biomass production. This highlights the need to consider the relationship between biodiversity and ecosystem functioning in a pluralistic way that considers both the processes that shape diversity and productivity simultaneously in naturally assembled communities. [ABSTRACT FROM AUTHOR]

Recent evidence has questioned whether the Latitudinal Diversity Gradient (LDG), whereby species richness increases towards the Equator, results in higher rates of speciation in the tropics. Allowing for time heterogeneity in speciation rate estimates for over 60,000 angiosperm species, we found that the LDG does not arise from variation in speciation rates because lineages do not speciate faster in the tropics. These results were consistently retrieved using two other methods to test the association between occupancy of tropical habitats and speciation rates. Our speciation rate estimates were robust to the effects of both undescribed species and missing taxa. Overall, our results show that speciation rates follow an opposite pattern to global variation in species richness. Greater ecological opportunity in the temperate zones, stemming from less saturated communities, higher species turnover or greater environmental change, may ultimately explain these results. [ABSTRACT FROM AUTHOR]

Most ecosystems are affected by anthropogenic or natural pulse disturbances, which alter the community composition and functioning for a limited period of time. Whether and how quickly communities recover from such pulses is central to our understanding of biodiversity dynamics and ecosystem organisation, but also to nature conservation and management. Here, we present a meta‐analysis of 508 (semi‐)natural field experiments globally distributed across marine, terrestrial and freshwater ecosystems. We found recovery to be significant yet incomplete. At the end of the experiments, disturbed treatments resembled controls again when considering abundance (94%), biomass (82%), and univariate diversity measures (88%). Most disturbed treatments did not further depart from control after the pulse, indicating that few studies showed novel trajectories induced by the pulse. Only multivariate community composition on average showed little recovery: disturbed species composition remained dissimilar to the control throughout most experiments. Still, when experiments revealed a higher compositional stability, they tended to also show higher functional stability. Recovery was more complete when systems had high resistance, whereas resilience and resistance were negatively correlated. The overall results were highly consistent across studies, but significant differences between ecosystems and organism groups appeared. Future research on disturbances should aim to understand these differences, but also fill obvious gaps in the empirical assessments for regions (especially the tropics), ecosystems and organisms. In summary, we provide general evidence that (semi‐)natural communities can recover from pulse disturbances, but compositional aspects are more vulnerable to long‐lasting effects of pulse disturbance than the emergent functions associated to them. [ABSTRACT FROM AUTHOR]

Supporting ecosystem services and conserving biodiversity may be compatible goals, but there is concern that service‐focused interventions mostly benefit a few common species. We use a spatially replicated, multiyear experiment in four agricultural settings to test if enhancing habitat adjacent to crops increases wild bee diversity and abundance on and off crops. We found that enhanced field edges harbored more taxonomically and functionally abundant, diverse, and compositionally different bee communities compared to control edges. Enhancements did not increase the abundance or diversity of bees visiting crops, indicating that the supply of pollination services was unchanged following enhancement. We find that actions to promote crop pollination improve multiple dimensions of biodiversity, underscoring their conservation value, but these benefits may not be spilling over to crops. More work is needed to identify the conditions that promote effective co‐management of biodiversity and ecosystem services. [ABSTRACT FROM AUTHOR]

Among the local processes that determine species diversity in ecological communities, fluctuation‐dependent mechanisms that are mediated by temporal variability in the abundances of species populations have received significant attention. Higher temporal variability in the abundances of species populations can increase the strength of temporal niche partitioning but can also increase the risk of species extinctions, such that the net effect on species coexistence is not clear. We quantified this temporal population variability for tree species in 21 large forest plots and found much greater variability for higher latitude plots with fewer tree species. A fitted mechanistic model showed that among the forest plots, the net effect of temporal population variability on tree species coexistence was usually negative, but sometimes positive or negligible. Therefore, our results suggest that temporal variability in the abundances of species populations has no clear negative or positive contribution to the latitudinal gradient in tree species richness. [ABSTRACT FROM AUTHOR]

Local neighbourhood interactions are considered a main driver for biodiversity–productivity relationships in forests. Yet, the structural responses of individual trees in species mixtures and their relation to crown complementarity remain poorly understood. Using a large‐scale forest experiment, we studied the impact of local tree species richness and structural variability on above‐ground wood volume allocation patterns and crown morphology. We applied terrestrial laser scanning to capture the three‐dimensional structure of trees and their temporal dynamics. We found that crown complementarity and crown plasticity increased with species richness. Trees growing in species‐rich neighbourhoods showed enhanced aboveground wood volume both in trunks and branches. Over time, neighbourhood diversity induced shifts in wood volume allocation in favour of branches, in particular for morphologically flexible species. Our results demonstrate that diversity‐mediated shifts in allocation pattern and crown morphology are a fundamental mechanism for crown complementarity and may be an important driver of overyielding. [ABSTRACT FROM AUTHOR]

Habitat loss leads to species extinctions, both immediately and over the long term as 'extinction debt' is repaid. The same quantity of habitat can be lost in different spatial patterns with varying habitat fragmentation. How this translates to species loss remains an open problem requiring an understanding of the interplay between community dynamics and habitat structure across temporal and spatial scales. Here we develop formulas that characterise extinction debt in a spatial neutral model after habitat loss and fragmentation. Central to our formulas are two new metrics, which depend on properties of the taxa and landscape: 'effective area', measuring the remaining number of individuals and 'effective connectivity', measuring individuals' ability to disperse through fragmented habitat. This formalises the conventional wisdom that habitat area and habitat connectivity are the two critical requirements for long‐term preservation of biodiversity. Our approach suggests that mechanistic fragmentation metrics help resolve debates about fragmentation and species loss. [ABSTRACT FROM AUTHOR]

Progressive habitat transformation causes global changes in landscape biodiversity patterns, but can be hard to quantify. Rarefaction/extrapolation approaches can quantify within‐habitat biodiversity, but may not be useful for cases in which one habitat type is progressively transformed into another habitat type. To quantify biodiversity patterns in such transformed landscapes, we use Hill numbers to analyse individual‐based species abundance data or replicated, sample‐based incidence data. Given biodiversity data from two distinct habitat types, when a specified proportion of original habitat is transformed, our approach utilises a proportional mixture of two within‐habitat rarefaction/extrapolation curves to analytically predict biodiversity changes, with bootstrap confidence intervals to assess sampling uncertainty. We also derive analytic formulas for assessing species composition (i.e. the numbers of shared and unique species) for any mixture of the two habitat types. Our analytical and numerical analyses revealed that species unique to each habitat type are the most important determinants of landscape biodiversity patterns. [ABSTRACT FROM AUTHOR]

Intraspecific variation is at the core of evolutionary theory, and yet, from an ecological perspective, we have few robust expectations for how this variation should affect the dynamics of large communities. Here, by adapting an approach from evolutionary game theory, we show that the incorporation of phenotypic variability into competitive networks dramatically alters the dynamics across ecological timescales, stabilising the systems and buffering the communities against demographic perturbations. The beneficial effects of phenotypic variability are strongest when there are substantial differences among phenotypes and when phenotypes are inherited with moderately high fidelity; yet even low levels of variation lead to significant increases in diversity, stability, and robustness. By identifying a simple and ubiquitous stabilising force in competitive communities, this work contributes to our core understanding of how biological diversity is maintained in natural systems. [ABSTRACT FROM AUTHOR]

While biodiversity loss continues globally, assessments of regional and local change over time have been equivocal. Here, we assess changes in plant species richness and beta diversity over 140 years at the level of regions within a country. Using 19th‐century flora censuses for 14 Danish regions as a baseline, we overcome previous criticisms concerning short time series and neglect of completely altered habitats. We find that species composition has changed dramatically and directionally across all regions. Substantial species losses were more than offset by large gains, resulting in a net increase in species richness in all regions. The occupancy of initially widespread species increased, while initially rare species lost terrain. These changes were accompanied by strong biotic homogenization; i.e. regions are more similar now than they were 140 years ago. Species declining in Denmark were found to be in similar decline all over Northern Europe. [ABSTRACT FROM AUTHOR]

A number of investigators have invoked a cascading local interaction model to account for power-law-distributed fluctuations in ecological variables. Invoking such a model requires that species be tightly coupled, and that local interactions among species influence ecosystem dynamics over a broad range of scales. Here we reanalyse bird population data used by, Dynamics of North American breeding bird populations. Nature, 393, 257–260) to support a cascading local interaction model. We find that the power law they report can be attributed to mixing of lognormal distributions. More tentatively, we propose that mixing of distributions accounts for other empirical power laws reported in the ecological literature. [ABSTRACT FROM AUTHOR]

There exist a number of key macroecological patterns whose ubiquity suggests that the spatio‐temporal structure of ecological communities is governed by some universal mechanisms. The nature of these mechanisms, however, remains poorly understood. Here, we probe spatio‐temporal patterns in species richness and community composition using a simple metacommunity assembly model. Despite making no a priori assumptions regarding biotic spatial structure or the distribution of biomass across species, model metacommunities self‐organise to reproduce well‐documented patterns including characteristic species abundance distributions, range size distributions and species area relations. Also in agreement with observations, species richness in our model attains an equilibrium despite continuous species turnover. Crucially, it is in the neighbourhood of the equilibrium that we observe the emergence of these key macroecological patterns. Biodiversity equilibria in models occur due to the onset of ecological structural instability, a population‐dynamical mechanism. This strongly suggests a causal link between local community processes and macroecological phenomena. [ABSTRACT FROM AUTHOR]

Managing agricultural landscapes to support biodiversity and ecosystem services is a key aim of a sustainable agriculture. However, how the spatial arrangement of crop fields and other habitats in landscapes impacts arthropods and their functions is poorly known. Synthesising data from 49 studies (1515 landscapes) across Europe, we examined effects of landscape composition (% habitats) and configuration (edge density) on arthropods in fields and their margins, pest control, pollination and yields. Configuration effects interacted with the proportions of crop and non‐crop habitats, and species' dietary, dispersal and overwintering traits led to contrasting responses to landscape variables. Overall, however, in landscapes with high edge density, 70% of pollinator and 44% of natural enemy species reached highest abundances and pollination and pest control improved 1.7‐ and 1.4‐fold respectively. Arable‐dominated landscapes with high edge densities achieved high yields. This suggests that enhancing edge density in European agroecosystems can promote functional biodiversity and yield‐enhancing ecosystem services. [ABSTRACT FROM AUTHOR]