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A major restriction in predicting plant community response to future climate change is a lack of long-term data needed to properly assess species and community response to climate and identify a baseline to detect climate anomalies. Here, we use a 106-year dataset on a Sonoran Desert plant community to test the role of extreme temperature and precipitation anomalies on community dynamics at the decadal scale and over time. Additionally, we tested the climate sensitivity of 39 desert plant species and whether sensitivity was associated with growth form, longevity, geographic range, or local dominance. We found that desert plant communities had shifted directionally over the 106 years, but the climate had little influence on this directional change primarily due to nonlinear shifts in precipitation anomalies. Decadal-scale climate had the largest impact on species richness, species relative density, and total plant cover, explaining up to 26%, 45%, and 55% of the variance in each, respectively. Drought and the interaction between the frequency of freeze events and above-average summer precipitation were among the most influential climate factors. Increased drought frequency and wetter periods with frequent freeze events led to larger reductions in total plant cover, species richness, and the relative densities of dominant subshrubs Ambrosia deltoidea and Encelia farinosa. More than 80% of the tested species were sensitive to climate, but sensitivity was not associated with a species' local dominance, longevity, geographic range, or growth form. Some species appear to exhibit demographic buffering, where when they have a higher sensitivity to drought, they also tend to have a higher sensitivity to favorable (i.e., wetter and hotter) conditions. Overall, our results suggest that, while decadal-scale climate variation substantially impacts these desert plant communities, directional change in temperature over the last century has had little impact due to the relative importance of precipitation and drought. With projections of increased drought in this region, we may see reductions in total vegetation cover and species richness due to the loss of species, possibly through a breakdown in their ability to demographically buffer climatic variation, potentially changing community dynamics through a change in facilitative and competitive processes. [ABSTRACT FROM AUTHOR]

Rapid environmental changes result in massive biodiversity loss, with detrimental consequences for the functioning of ecosystems. Recent studies suggest that intraspecific diversity can contribute to ecosystem functioning to an extent comparable to contributions of interspecific diversity. Knowledge on the relative importance of these two sources of biodiversity is essential for predicting ecosystem consequences of biodiversity loss and will aid in the prioritization of conservation targets and implementation of management measures. However, our quantitative insights into how interspecific and intraspecific biodiversity loss affects ecosystem functioning and how the effects of these two sources of biodiversity loss on ecosystem functioning can be compared are still very limited. To facilitate such quantitative insights, we extend the interspecific Price partitioning method originally introduced by J. Fox in 2006, previously used to quantify species loss and gain effects on ecosystem functioning, to also account for the effects of intraspecific diversity loss and gain on ecosystem function. Using this extended version can yield the quantitative information required for answering research questions addressing correlations between interspecific and intraspecific diversity effects on ecosystem functioning, identifying interspecific and intraspecific groups with large effects, and assessing whether intraspecific diversity can compensate for losses in interspecific diversity. Applying this method to carefully designed experiments will provide additional insights into how biodiversity loss at different ecological levels contributes to and changes ecosystem functioning. [ABSTRACT FROM AUTHOR]

In the midst of an ongoing biodiversity crisis, much research has focused on species losses and their impacts on ecosystem functioning. The functional consequences (ecosystem response) of shifts in communities are shaped not only by changes in species richness, but also by compositional shifts that result from species losses and gains. Species differ in their contribution to ecosystem functioning, so species identity underlies the consequences of species losses and gains on ecosystem functions. Such research is critical to better predict the impact of disturbances on communities and ecosystems. We used the "Community Assembly and the Functioning of Ecosystems" (CAFE) approach, a modification of the Price equation to understand the functional consequences and relative effects of richness and composition changes in small nonvolant mammal and dung beetle communities as a result of two common disturbances in North American prairie restorations, prescribed fire and the reintroduction of large grazing mammals. Previous research in this system has shown dung beetles are critically important decomposers, while small mammals modulate much energy in prairie food webs. We found that dung beetle communities were more responsive to bison reintroduction and prescribed fires than small nonvolant mammals. Dung beetle richness increased after bison reintroduction, with higher dung beetle community biomass resulting from changes in remaining species (context‐dependent component) rather than species turnover (richness components); prescribed fire caused a minor increase in dung beetle biomass for the same reason. For small mammals, bison reintroduction reduced energy transfer through the loss of species, while prescribed fire had little impact on either small mammal richness or energy transfer. The CAFE approach demonstrates how bison reintroduction controls small nonvolant mammal communities by increasing prairie food web complexity, and increases dung beetle populations with possible benefits for soil health through dung mineralization and soil bioturbation. Prescribed fires, however, have little effect on small mammals and dung beetles, suggesting a resilience to fire. These findings illustrate the key role of re‐establishing historical disturbance regimes when restoring endangered prairie ecosystems and their ecological function. [ABSTRACT FROM AUTHOR]

It has typically been assumed that habitat destruction, characterized by habitat loss and fragmentation, has consistently negative effects on biodiversity. While numerous empirical studies have shown the detrimental effects of habitat loss, debate continues as to whether habitat fragmentation has universally negative effects. To explore the effects of habitat fragmentation, we developed a simple model for site‐occupancy dynamics in fragmented landscapes. With the model, we demonstrate that a competition–colonization trade‐off can result in nonlinear oscillatory responses in biodiversity to both habitat loss and fragmentation. However, the overall pattern of habitat loss reducing species richness is still established, in line with empirical observations. Interestingly, the existence of localized oscillations in biodiversity can explain the mixed responses of species richness to habitat fragmentation per se observed in nature, thereby reconciling the debate on the fragmentation–diversity relationship. Therefore, this study offers a parsimonious mechanistic explanation for empirically observed biodiversity patterns in response to habitat destruction. [ABSTRACT FROM AUTHOR]

Anthropogenic environmental changes are influencing the structure and function of many ecological communities, but their underlying mechanisms are often poorly understood. We conducted a 7‐year field experiment to explore the ecological consequences of nitrogen (N) and phosphorous (P) enrichment in a high‐altitude Tibetan alpine grassland. We found that the enrichment of both N and P, but not either alone, increased plant above‐ and belowground biomass. In contrast, N, but not P, enrichment reduced species richness and altered plant phylogenetic diversity and structure. Whereas plant species loss and changes in phylogenetic structure were mainly driven by higher soil manganese levels under N addition, they were mainly driven by increased plant belowground biomass under the addition of both N and P. Our study highlights the resource co‐limitation of community biomass but not the structure of the study grassland, while also identifying soil metal toxicity and belowground competition as important mechanisms driving community changes following nutrient amendment. [ABSTRACT FROM AUTHOR]

Plant species loss due to eutrophication is a common phenomenon in temperate perennial grasslands. It occurs in a nonrandom fashion and is usually explained by increased competitive size asymmetry between the co‐occurring winner (tall species with optima in productive habitats) and loser species (small‐statured plants typical for unproductive habitats). It remains unclear why nutrient addition decreases diversity in communities consisting of losers only, whereas it has little effect on winner‐only communities. Here, I used the framework of modern coexistence theory to explore fertilization‐driven changes in fitness and niche differences between different combinations of field‐identified winner (W) and loser (L) species. I experimentally estimated competition parameters for plant species pairs constructed from a pool of eight species, including pairs of species from the same (WW, LL) and different species categories (LW) grown for approximately 2 years in control and fertilized conditions. Concurrently, I also followed plant species diversity in mesocosm communities constructed from the same species pool (four‐species communities including winners, losers, or both) exposed to control and nutrient addition. I found that nutrient addition can reduce but, unexpectedly, also promote species coexistence depending on the type of species pairs. Whereas nutrient addition eroded the coexistence of losers with winners, but also with other losers, treatment had the opposite effect on the persistence of winner species. Fertilization induced large fitness differences between species in loser–winner and loser–loser combinations, but had little effect on the fitness differences of species within the winner–winner combination. In addition, the persistence of winner pairs was promoted by larger niche differences compared to loser species, irrespective of soil nutrients. The differences in how nutrient addition modified coexistence at the pairwise level were reflected by differences in the evenness of multispecies communities assembled from the corresponding species categories. These results suggest that the effect of eutrophication on plant species richness cannot simply be explained by an increased competitive asymmetry. To fully understand the effect of fertilization on the diversity of temperate grasslands, interspecific and intraspecific interactions should be explored while considering differences in species' ecological optima. [ABSTRACT FROM AUTHOR]

These observations add a unique example of predator-prey reversal that is dependent on life stage and shifts from dragonfly larva eating tadpoles in the aquatic environment to frogs eating dragonflies in the terrestrial environment (Figure 2). First, the green and golden bell frog often selects predator-free ephemeral wetlands to avoid heavy tadpole mortality by predators such as dragonfly larvae (Beranek, Sanders, et al., [6]). Keywords: amphibian; diet; odonata; predation; predator-prey dynamics; wetlands EN amphibian diet odonata predation predator-prey dynamics wetlands 1 6 6 08/03/23 20230801 NES 230801 INTRODUCTION There are many documented instances of "predator-prey reversal", which is a biological interaction where an organism that is typically thought of as prey in a pairwise predator-prey interaction instead acts as the predator at a different age or life stage (Barkai & Mcquaid, [1]), such as when adults of a prey species opportunistically prey on their predator's young. To address these knowledge gaps, we recommend a follow-up study where frogs undergo gastric lavage during periods of high dragonfly metamorph emergence (October and November) and compare this to periods of low dragonfly metamorph emergence (February and March). [Extracted from the article]

Moreover, grassland specialist species on the MCH are rare; other studies affirm I c i . 90% of species are forest limited, with only I c i . 2% limited to grassland (Dufils, [7]; Joseph & Seymour, [17]). However, as noted by Joseph and Seymour ([18]), that study is flawed, overreporting grassland-limited species and arguing for predominant C SB 4 sb -grazing Malagasy hippos that coevolved with grasslands based on carbon isotope data from "several" African hippos dated to I c i . 1950 (Bond et al., [3]). Extensive empirical research on the Malagasy Central Highlands (MCH) - including multiple papers published over the past few years - does not support the conclusion of the modeling study by Goel et al. ([11]) that forests are "range pinned" to the east of the MCH by an escarpment causing dispersal limitation. Although Goel et al. label these "savanna trees", no MCH trees are unequivocally "savanna trees" (Joseph et al., [15]) and omitting them is likely to favor grassland over forest in model outcomes. [Extracted from the article]

Habitat loss is often considered the greatest near‐term threat to biodiversity, while the impact of habitat fragmentation remains intensely debated. A key issue of this debate centers on the problem of scale–landscape or patch–at which to assess the consequences of fragmentation. Yet patterns are often confounded across scales, and experimental designs that could solve this scaling problem remain scarce. We conducted two field experiments in 30 experimental landscapes in which we manipulated habitat loss, fragmentation, and patch size for a community of four insect herbivores that specialize on the cactus Opuntia. In the first experiment, we destroyed 2088 Opuntia patches in either aggregated or random patterns and compared the relative effects of landscape‐scale loss and fragmentation to those of local patch size on species occurrence. This experiment focused on manipulating the relative separation of remaining patches, where we hypothesized that aggregated loss would disrupt dispersal more than random loss, leading to lower occurrence. In the second experiment, we destroyed 759 Opuntia patches to generate landscapes that varied in patch number and size for a given amount of habitat loss and assessed species occurrence. This experiment focused on manipulating the subdivision of remaining habitat, where we hypothesized that an increase in the number of patches for a given amount of loss would lead to negative effects on occurrence. For both, we expected that occurrence would increase with patch size. We find strong evidence for landscape‐scale effects of habitat fragmentation, with aggregated loss and a larger number of patches for a given amount of habitat loss leading to a lower frequency of patches occupied in landscapes. In both experiments, occurrence increased with patch size, yet interactions of patch size and landscape‐scale loss and fragmentation drove species occurrence in patches. Importantly, the direction of effects were consistent across scales and effects of patch size were sufficient to predict the effects of habitat loss and fragmentation across entire landscapes. Our experimental results suggest that changes at both the patch and landscape scales can impact populations, but that a long‐standing pattern—the patch‐size effect—captures much of the key variation shaping patterns of species occurrence. [ABSTRACT FROM AUTHOR]

Climate change is reshaping biological communities, as species track environmental temperature. Assemblage reorganization is underpinned by shifts in species abundance and distribution, but studies often focus on documenting compositional turnover. As a consequence, phenomena such as the tropicalization of temperate communities have been widely associated with increased occupancy of warm‐affinity species. Abundance‐weighted change in thermal affinity can be tracked with the Community Temperature Index (CTI), and decomposed into four processes: tropicalization (increasing warm‐affinity), borealization (increasing cold‐affinity), deborealization (decreasing cold‐affinity), and detropicalization (decreasing warm‐affinity). Further evaluation of these processes according to species persistence (i.e., immigrant, emigrant, and resident) may provide insights on whether novel communities emerge primarily from local shifts in species abundance or distribution. Using long‐term data on fish assemblages undergoing climate change's effects across 19 temperate estuaries surveyed for at least 20 years, we hypothesized (1) deborealization is the main process reshaping communities under climate change, and (2) the contribution of resident species to processes reshaping communities surpass the ones from immigrants and emigrants. Community dissimilarity was calculated through the Temporal Beta Index (TBI), which was further decomposed into species and individual losses and gains. These values were then used as effect sizes in the meta‐analyses performed to detect systematic trends in assemblage reorganization in response to climate change. We also calculated CTI and the strength of temperature‐related processes for resident, immigrant and emigrant species. Species and individual gains outweighed losses in estuaries. Temperature was correlated with changes in species abundance, but not occurrence. Fish abundance decreased with warming, and initially cooler estuaries gained more fish than warmer ones. Novel communities were shaped by a variety of processes, but mainly tropicalization. Assemblage reorganization was primarily driven by shifts in abundance of resident species with distinct thermal affinities, while contributions of arriving and exiting species played a secondary role. These findings reveal that novel communities are drawn primarily from the local species pool, due to changes in climate‐related drivers that favor distinct resident species. [ABSTRACT FROM AUTHOR]

Video S1 shows an animation of the GPS tracks of Rehovot, before, during, and after the hospital visit. gl After the poisoning event, the movements of Rehovot were tracked for another 6 years (Figure 1). Rehovot was fitted with a 90 g GPS-GSM transmitter (by e-obs telemetry; https://e-obs.de/), attached using a Teflon ribbon harness, in a backpack configuration (Harel, Horvitz, et al., [14]). Real-time GPS tracking is particularly crucial for the detection of poisoning events: whenever the GPS informs that a vulture is either moving very little or is suspected to be dead, an INPA ranger is immediately sent to the field to investigate (Hatzofe & Vine, [17]; Nemtzov et al., [24]). Keywords: conservation; GPS tracking; griffon vultures; Gyps fulvus; movement ecology EN conservation GPS tracking griffon vultures Gyps fulvus movement ecology 1 7 7 04/05/23 20230401 NES 230401 24th of August 2013. [Extracted from the article]

Understanding the drivers and impacts of spatiotemporal variation in species abundance on community trajectories is key to understanding the factors contributing to ecosystem resilience. Temporal variation in species trajectories across patches can provide compensation for species loss and can influence successional patterns. However, little is known about the underlying mechanisms that lead to patterns of species or spatial compensation and how those patterns may be mediated by consumer–resource relationships. Here we describe an experiment testing whether habitat attributes (e.g., structural complexity and spatial heterogeneity) mediate the effects of herbivory on tropical marine macroalgal communities by reducing accessibility and detectability, respectively, leading to variable trajectories among algal species at community (within patch) and metacommunity (i.e., among patch) scales. Reduced accessibility (greater habitat complexity) decreased the effects of herbivory (i.e., depressed consumption rate, increased algal species richness), and both accessibility and detectability (spatial heterogeneity) influenced algal community structure. Moreover, decreased accessibility at the community scale and a mosaic of accessibility at the metacommunity scale led to variation in community assembly. We suggest that habitat attributes can be important influencers of consumer–resource interactions on coral reefs, which in turn can increase species diversity, promote species succession, and enhance stability in algal metacommunities. [ABSTRACT FROM AUTHOR]

Theoretical models suggest that infectious diseases could play a substantial role in determining the spatial extent of host species, but few studies have collected the empirical data required to test this hypothesis. Pathogens that sterilize their hosts or spread through frequency‐dependent transmission could have especially strong effects on the limits of species' distributions because diseased hosts that are sterilized but not killed may continue to produce infectious stages and frequency‐dependent transmission mechanisms are effective even at very low population densities. We collected spatial pathogen prevalence data and population abundance data for alpine carnations infected by the sterilizing pathogen Microbotryum dianthorum, a parasite that is spread through both frequency‐dependent (vector‐borne) and density‐dependent (aerial spore transmission) mechanisms. Our 13‐year study reveals rapid declines in population abundance without a compensatory decrease in pathogen prevalence. We apply a stochastic, spatial model of parasite spread that accommodates spatial habitat heterogeneity to investigate how the population dynamics depend on multimodal (frequency‐dependent and density‐dependent) transmission. We found that the observed rate of population decline could plausibly be explained by multimodal transmission, but is unlikely to be explained by either frequency‐dependent or density‐dependent mechanisms alone. Multimodal pathogen transmission rates high enough to explain the observed decline predicted that eventual local extinction of the host species is highly likely. Our results add to a growing body of literature showing how multimodal transmission can constrain species distributions in nature. [ABSTRACT FROM AUTHOR]

Changes in the species richness of (meta‐)communities emerge from changes in the relative species abundance distribution (SAD), the total density of individuals, and the amount of spatial aggregation of individuals from the same species. Yet, how human disturbance affects these underlying diversity components at different spatial scales and how this interacts with important species traits, like dispersal capacity, remain poorly understood. Using data of carabid beetle communities along a highly replicated urbanization gradient, we reveal that species richness in urban sites was reduced due to a decline in individual density as well as changes in the SAD at both small and large spatial scales. Changes in these components of species richness were linked to differential responses of groups of species that differ in dispersal capacity. The individual density effect on species richness was due to a drastic 90% reduction of low‐dispersal individuals in more urban sites. Conversely, the decrease in species richness due to changes in the SAD at large (i.e., loss of species from the regional pool) and small (i.e., decreased evenness) spatial scales were driven by species with intermediate and high dispersal ability, respectively. These patterns coincide with the expected responses of these dispersal‐type assemblages toward human disturbance, namely, (i) loss of low‐dispersal species by local extinction processes, (ii) loss of higher‐dispersal species from the regional species pool due to decreased habitat diversity, and (iii) dominance of a few highly dispersive species resulting in a decreased evenness. Our results demonstrate that dispersal capacity plays an essential role in determining scale‐dependent changes in species richness patterns. Incorporating this information improves our mechanistic insight into how environmental change affects species diversity at different spatial scales, allowing us to better forecast how human disturbance will drive local and regional changes in biodiversity patterns. [ABSTRACT FROM AUTHOR]

Global changes can lead to species declines and extinctions through their impacts on species habitats at two distinct spatial scales: habitat destruction, in which individual habitat patches are destroyed by land‐use change or natural disasters, and habitat degradation, in which larger scale changes, such as nitrogen deposition or climate change, lower mean population abundances across landscapes. We developed a theory showing that, even when these two forms of global change have an identical impact on a species' total amount of habitat, they have qualitatively different consequences for species dynamics and extinction. Using metapopulation theory and simulations, we found distinct impacts of these global changes characterized through several responses: the rate at which populations are lost from the remaining patches, extinction thresholds, and the duration of extinction debts. Habitat degradation causes a faster decline in species populations when habitat reduction is low, making it particularly detrimental for rare species. Habitat destruction has smaller impacts for low habitat reduction, but shows clear thresholds beyond which it surpasses degradation's negative impact; the location and steepness of the threshold depends on species dispersal, with poor dispersers having steeper thresholds. These results highlight the challenge of using population monitoring to assess the consequences of global changes and predict consequences of further change: extinction trajectories cannot be predicted due to thresholds (habitat destruction) and lagged dynamics that lead to extinction debts (habitat degradation). Our research clarifies why the impacts of one type of global change may poorly predict the impacts of the other and suggests general rules for predicting the long‐term impacts of global changes based on species traits. [ABSTRACT FROM AUTHOR]

(i-k) Differently sized chironomid larvae from the cavity of C. fluminea, Sein Kaphoe River, Laos, 14.7710N, 106.1704E, 3 March 2020. gl In summary, it was discovered for the first time that mayflies, chironomids, and fishes can use the I Corbicula i clams as a host for their larval development (Figure 1; Appendix S1: Table S1). Keywords: chironomids; Corbicula clams; endosymbionts; gudgeon; larvae; mayfly EN chironomids Corbicula clams endosymbionts gudgeon larvae mayfly 1 5 5 01/04/23 20230101 NES 230101 In a sense, a single individual host can be considered an ecosystem. It is noteworthy to mention that one I Corbicula i contained both chironomid and mayfly larvae (Figure 1g), and two clams had two chironomid larvae under the mantle of the right and the left valves. Chironomids, Corbicula clams, endosymbionts, gudgeon, larvae, mayfly. [Extracted from the article]

Species range sizes and realized niche breadths vary tremendously. Understanding the source of this variation has been a long‐term aim in evolutionary ecology and is a major tool in efforts to ameliorate the impacts of changing climates on species distributions. Species ranges that span a large climatic envelope can be achieved by a collection of specialized genotypes locally adapted to a small range of conditions, by genotypes with stable fitness across variable environments, or a combination of these factors. We asked whether fitness expressed along a key niche axis, water availability, could explain a species' realized niche breadth, its geographic range and climate breadth, in 11 species from a clade of jewelflowers whose range sizes vary by two orders of magnitude. Specifically, we explored whether the range size of a species was related to the ability of genotypes (maternal families) to maintain fitness across a range of experimental water availabilities based on 30‐year historical field precipitation regimes. We operationally characterized fitness homeostasis through the coefficient of variation in fitness of a genotype (family) across the experimental water gradient. We found that species with genotypes that had high fitness homeostasis, low variation in fitness over our treatments, had larger climatic niche breadth and geographic range in their field distributions. The result was robust to alternate measures of fitness homeostasis. Our results show that the fitness homeostasis of genotypes can be a major factor contributing to niche breadth and range size in this clade. Fitness homeostasis can buffer species from loss of genetic diversity and under changing climates, provides time for adaptation to future conditions. [ABSTRACT FROM AUTHOR]

Accumulating evidence suggests that herbivorous insects influence the local composition and richness of Neotropical plant species, particularly in species‐rich genera. Species richness, phylogenetic diversity, and chemical diversity all influence the ability of insect herbivores to find and utilize their hosts. The relative impact of these components of diversity on species coexistence and plant–herbivore interactions is not well understood. We constructed 60 local communities of up to 13 species of Piper (Piperaceae) in native, mature forest at a lowland wet forest location in Costa Rica. The species composition of each community was chosen such that species richness, phylogenetic diversity, and GCMS‐based chemical diversity were varied independently among communities. We predicted that chemical diversity would most strongly affect the communities across time, with smaller effects of taxonomic and phylogenetic diversity. At 13 months after the experimental planting, we assessed survivorship of each cutting, measured total leaf area loss of the survivors, leaf area loss to generalist and specialist herbivorous insect species, and local extinction of species. Generalist and specialist herbivory decreased with increasing levels of species richness and phylogenetic diversity, respectively. Surprisingly, there was no independent effect of chemical diversity on any of the three measures of herbivore damage. Nevertheless, plots with a higher chemical and phylogenetic diversity showed decreased plant mortality and local species extinction. Overall, our results suggested that both chemical and phylogenetic similarity are important factors in the assembly and maintenance of tropical plant communities. The fact that chemical diversity influences plant mortality suggests that leaf herbivores, and possibly other plant natural enemies, could increase plant diversity via the selective mortality of similar chemotypes. [ABSTRACT FROM AUTHOR]

Understanding the ecological processes that maintain community function in systems experiencing species loss, and how these processes change over time, is key to understanding the relationship between community structure and function and predicting how communities may respond to perturbations in the Anthropocene. Using a 30‐year experiment on desert rodents, we show that the impact of species loss on community‐level energy use has changed repeatedly and dramatically over time, due to (1) the addition of new species to the community, and (2) a reduction in functional redundancy among the same set of species. Although strong compensation, initially driven by the dispersal of functionally redundant species to the local community, occurred in this system from 1997 to 2010, since 2010, compensation has broken down due to decreasing functional overlap within the same set of species. Simultaneously, long‐term changes in sitewide community composition due to niche complementarity have decoupled the dynamics of compensation from the overall impact of species loss on community‐level energy use. Shifting, context‐dependent compensatory dynamics, such as those demonstrated here, highlight the importance of explicitly long‐term, metacommunity, and eco‐evolutionary perspectives on the link between species‐level fluctuations and community function in a changing world. [ABSTRACT FROM AUTHOR]

Metacommunity theory predicts that the composition and diversity of a site depend on its characteristics and those of its neighborhood. Dispersal between plots in a field experiment could link responses observed in a focal plot to both its treatment and those of its neighbors. However, the diversity, composition, and treatments of neighboring plots are rarely included in analyses of experimental treatments. We analyzed a spatially gridded grassland nitrogen addition experiment and found that plant species richness and the composition of focal plots were influenced not just by their nitrogen treatment but also by the number of species in neighboring plots and their abundances. For each additional species in a focal plot's neighborhood, the species richness of the focal plot increased by 0.30 species. Control plots had a significant loss of species, at a rate of ~0.23 species per year during the 23‐year experiment, but only when their neighborhoods had low species richness. Changes in the abundance of the three dominant species depended both on the nitrogen treatment of a focal plot and on their abundance in adjacent plots. Our analyses suggested that both the experimental nitrogen treatments and metacommunity processes codetermined plant species richness and plant species' abundances. Our findings suggested that analyzing many traditional field experiments with a metacommunity perspective may reveal a confounding of experimental treatments and provide empirical data to test metacommunity theory. [ABSTRACT FROM AUTHOR]

Competition is often highlighted as a major force influencing plant species diversity. However, there are multiple facets of competition (e.g., strength, intransitivity, and size asymmetry) that may have independent and differential impacts on diversity, making understanding the degree to which competition structures communities difficult. Unfortunately, field‐based experiments that decouple multiple facets of competition are lacking, limiting our ability to test theoretical frameworks and reducing understanding of the actual linkages among competition and coexistence. Here, we experimentally manipulate the size structure of local grassland communities to examine the relative impacts of competitive size asymmetry (i.e., competitive advantage based on relative size) and intensity (i.e., mean effect of neighbors on plant growth) on species loss and gain. Increased competitive size asymmetry was associated with increased species loss and decreased species gain, while no relationship was found between competitive intensity and species loss and gain. Furthermore, the probability of loss was not dependent on a species initial size, suggesting that small species may not always be the losers of size‐asymmetric interactions. Instead, loss was dependent on species rarity, where loss was higher for rare species. Overall, these results suggest that competitive size asymmetry may be more important for species loss than intensity in some plant communities and demonstrates the importance of decoupling different aspects of competition to better understand their drivers and ecological consequences. [ABSTRACT FROM AUTHOR]

Habitat fragmentation remains a major focus of research by ecologists decades after being put forward as a threat to the integrity of ecosystems. While studies have documented myriad biotic changes in fragmented landscapes, including the local extinction of species from fragments, the demographic mechanisms underlying these extinctions are rarely known. However, many of them—especially in lowland tropical forests—are thought to be driven by one of two mechanisms: (1) reduced recruitment in fragments resulting from changes in the diversity or abundance of pollinators and seed dispersers or (2) increased rates of individual mortality in fragments due to dramatically altered abiotic conditions, especially near fragment edges. Unfortunately, there have been few tests of these potential mechanisms due to the paucity of long‐term and comprehensive demographic data collected in both forest fragments and continuous forest sites. Here we report 11 years (1998–2009) of demographic data from populations of the Amazonian understory herb Heliconia acuminata (LC Rich.) found at Brazil's Biological Dynamics of Forest Fragments Project (BDFFP). The data set comprises >66,000 plant × year records of 8586 plants, including 3464 seedlings established after the first census. Seven populations were in experimentally isolated fragments (one in each of four 1‐ha fragments and one in each of three 10‐ha fragments), with the remaining six populations in continuous forest. Each population was in a 50 × 100 m permanent plot, with the distance between plots ranging from 500 m to 60 km. The plants in each plot were censused annually, at which time we recorded, identified, marked, and measured new seedlings, identified any previously marked plants that died, and recorded the size of surviving individuals. Each plot was also surveyed four to five times during the flowering season to identify reproductive plants and record the number of inflorescences each produced. These data have been used to investigate topics ranging from the way fragmentation‐related reductions in germination influence population dynamics to statistical methods for analyzing reproductive rates. This breadth of prior use reflects the value of these data to future researchers. In addition to analyses of plant responses to habitat fragmentation, these data can be used to address fundamental questions in plant demography and the evolutionary ecology of tropical plants and to develop and test demographic models and tools. Though we welcome opportunities to collaborate with interested users, there are no restrictions on the use of this data set. However, we do request that those using the data for teaching or research purposes inform us of how they are doing so and cite this paper and the data archive when appropriate. Any publication using the data must also include a BDFFP Technical Series Number in the Acknowledgments. Authors can request this series number upon the acceptance of their article by contacting the BDFFP's Scientific Coordinator or E. M. Bruna. [ABSTRACT FROM AUTHOR]

The loss of aboveground plant diversity alters belowground ecosystem function; yet, the mechanisms underpinning this relationship and the degree to which plant community structure and climate mediate the effects of plant species loss remain unclear. Here, we explored how plant species loss through experimental removal shaped belowground function in ecosystems characterized by different climatic regimes and edaphic properties. We measured plant community composition as well as potential carbon (C) and nitrogen (N) mineralization and microbial extracellular enzyme activity in soils collected from four unique plant removal experiments located along an elevational gradient in Colorado, USA. We found that, regardless of the identity of the removed species or the climate at each site, plant removal decreased the absolute variation in potential N mineralization rates and marginally reduced the magnitude of N mineralization rates. While plant species removal also marginally reduced C mineralization rates, C mineralization, unlike N mineralization, displayed sensitivity to the climatic and edaphic differences among sites, where C mineralization was greatest at the high elevation site that receives the most precipitation annually and contains the largest soil total C pool. Plant removal had little impact on soil enzyme activity. Removal effects were not contingent on the amount of biomass removed annually, and shifts in mineralization rates occurred despite only marginal shifts in plant community structure following plant species removal. Our results present a surprisingly simple and consistent pattern of belowground response to the loss of dominant plant species across an elevational gradient with different climatic and edaphic properties, suggesting a common response of belowground ecosystem function to plant species loss regardless of which plant species are lost or the broader climatic context. [ABSTRACT FROM AUTHOR]

Understanding the impacts of global change on ecological communities is a major challenge in modern ecology. The gain or loss of particular species and the disruption of key interactions are both consequences and drivers of global change that can lead to the disassembly of ecological networks. We examined whether the disruption of a hummingbird–mistletoe–marsupial mutualism by the invasion of non‐native species can have cascading effects on both pollination and seed dispersal networks in the temperate forest of Patagonia, Argentina. We focused on network motifs, subnetworks composed of a small number of species exhibiting particular patterns of interaction, to examine the structure and diversity of mutualistic networks. We found that the hummingbird–mistletoe–marsupial mutualism plays a critical role in the community by increasing the complexity of pollination and seed dispersal networks through supporting a high diversity of interactions. Moreover, we found that the disruption of this tripartite mutualism by non‐native ungulates resulted in diverse indirect effects that led to less complex pollination and seed dispersal networks. Our results demonstrate that the gains and losses of particular species and the alteration of key interactions can lead to cascading effects in the community through the disassembly of mutualistic networks. [ABSTRACT FROM AUTHOR]

Consequently, it is notable that the negative relationship between mortality and age suggested by my reanalysis is a very different result than the pronounced, positive mortality senescence reported in Warner et al. (2016), which has been frequently cited as a rare example of senescence among Chelonians (e.g., Nelson and Masel 2017, Cohen 2018). Reinke et al. (2020) also use a Gompertz function for the mortality senescence component; however, in contrast to Warner et al. (2016), their analysis assumes positive senescence a priori. When I refitted their model with a prior that did not assume positive senescence, I found that support was actually higher for negative mortality senescence in which adult survival increased with age in male and female painted turtles in WI and IL. Joint estimation of growth and survival from mark-recapture data to improve estimates of senescence in wild populations: Comment. [Extracted from the article]

Frameworks exclusively considering functional diversity are gaining popularity, as they complement and extend the information provided by taxonomic diversity metrics, particularly in response to disturbance. Taxonomic diversity should be included in functional diversity frameworks to uncover the functional mechanisms causing species loss following disturbance events. We present and test a predictive framework that considers temporal functional and taxonomic diversity responses along disturbance gradients. Our proposed framework allows us to test different multidimensional metrics of taxonomic diversity that can be directly compared to calculated multidimensional functional diversity metrics. It builds on existing functional diversity–disturbance frameworks both by using a gradient approach and by jointly considering taxonomic and functional diversity. We used previously unpublished stream insect community data collected prior to, and for the two years following, an extreme flood event that occurred in 2013. Using 14 northern Colorado mountain streams, we tested our framework and determined that taxonomic diversity metrics calculated using multidimensional methods resulted in concordance between taxonomic and functional diversity responses. By considering functional and taxonomic diversity together and using a gradient approach, we were able to identify some of the mechanisms driving species losses following this extreme disturbance event. [ABSTRACT FROM AUTHOR]

Spatial rarity is often used to predict extinction risk, but rarity can also occur temporally. Perhaps more relevant in the context of global change is whether a species is core to a community (persistent) or transient (intermittently present), with transient species often susceptible to human activities that reduce niche space. Using 5–12 yr of data on 1,447 plant species from 49 grasslands on five continents, we show that local abundance and species persistence under ambient conditions are both effective predictors of local extinction risk following experimental exclusion of grazers or addition of nutrients; persistence was a more powerful predictor than local abundance. While perturbations increased the risk of exclusion for low persistence and abundance species, transient but abundant species were also highly likely to be excluded from a perturbed plot relative to ambient conditions. Moreover, low persistence and low abundance species that were not excluded from perturbed plots tended to have a modest increase in abundance following perturbance. Last, even core species with high abundances had large decreases in persistence and increased losses in perturbed plots, threatening the long‐term stability of these grasslands. Our results demonstrate that expanding the concept of rarity to include temporal dynamics, in addition to local abundance, more effectively predicts extinction risk in response to environmental change than either rarity axis predicts alone. [ABSTRACT FROM AUTHOR]

Islands are epicenters of animal extinctions and population declines. These losses exacerbate biodiversity loss and disrupt ecological services in areas of high endemism. Island defaunation is primarily driven by invasive mammalian predators, and mammal eradications are reversing population declines for some island species. Invasive mammal eradications may also have the capacity to restore ecological interactions, along with the recovery of island fauna. Here we show that invasive mammal eradication in fenced ecosanctuaries results in higher rates of bird foraging on fruit, and higher bird‐mediated seed dispersal, than in similar forests without mammal eradication. We further show that higher foraging and seed dispersal is related to higher densities of native bird species, after accounting for natural variation in fruit availability. For the many other systems globally that are under threat from invasive mammals, New Zealand's fenced ecosanctuary model offers a promising tool for restoring biodiversity and ecosystem services. [ABSTRACT FROM AUTHOR]

Disturbance often increases local‐scale (α) diversity by suppressing dominant competitors. However, widespread disturbances may also reduce biotic heterogeneity (β diversity) by making the identities and abundances of species more similar among patches. Landscape‐scale (γ) diversity may also decline if disturbance‐sensitive species are lost. California's vernal pool plant communities are species rich, in part because of two scales of β diversity: (1) within pools, as species composition changes with depth (referred to here as vertical β diversity), and (2) between pools, in response to dispersal limitation and variation in pool attributes (referred to here as horizontal β diversity). We asked how grazing by livestock, a common management practice, affects vernal pool plant diversity at multiple hierarchical spatial scales. In terms of abundance‐weighted diversity, grazing increased α both within local pool habitat zones and at the whole‐pool scale, as well as γ at the pasture scale without influencing horizontal or vertical β diversity. In terms of species richness, increases in α diversity within habitat zones and within whole pools led to small decreases in horizontal β diversity as species occupancy increased. This had a dampened effect on species richness at the γ (pasture) scale without any loss of disturbance‐sensitive species. We conclude that grazing increases species richness and evenness (α) by reducing competitive dominance, without large disruptions to the critical spatial heterogeneity (β) that generates high landscape‐level diversity (γ). [ABSTRACT FROM AUTHOR]

Biodiversity is typically considered as a one‐dimensional metric (e.g., species richness), yet the consequences of species loss may be different depending on where extinctions occur in the food web. Here, I used a manipulative field experiment in a temperate subtidal marine system to explore the implications of diversity loss at multiple trophic levels for ecosystem functioning and food web structure. The four manipulated predators included the small painted goby and common prawn, which are also fed on by the larger black goby and shore crab. Antagonistic interactions between the manipulated predators (e.g., intraguild predation, intimidation, interference competition) limited their negative effects on the rest of the food web. Top‐down control was so suppressed at the highest level of multitrophic diversity that the resulting food webs were as complex and productive as those containing no manipulated predators. Negative interactions between the predators weakened as multitrophic diversity decreased, however, resulting in stronger consumption of lower trophic levels and a simpler food web with lower rates of two key ecosystem processes: primary production and decomposition. These results show how indirect interactions between predators on multiple trophic levels help to promote the complexity and functioning of natural systems. [ABSTRACT FROM AUTHOR]

Understanding factors that maintain ecosystem stability is critical in the face of environmental change. Experiments simulating species loss from grassland have shown that losing biodiversity decreases ecosystem stability. However, as the originally sown experimental communities with reduced biodiversity develop, plant evolutionary processes or the assembly of interacting soil organisms may allow ecosystems to increase stability over time. We explored such effects in a long‐term grassland biodiversity experiment with plant communities with either a history of co‐occurrence (selected communities) or no such history (naïve communities) over a 4‐yr period in which a major flood disturbance occurred. Comparing communities of identical species composition, we found that selected communities had temporally more stable biomass than naïve communities, especially at low species richness. Furthermore, selected communities showed greater biomass recovery after flooding, resulting in more stable post‐flood productivity. In contrast to a previous study, the positive diversity–stability relationship was maintained after the flooding. Our results were consistent across three soil treatments simulating the presence or absence of co‐selected microbial communities. We suggest that prolonged exposure of plant populations to a particular community context and abiotic site conditions can increase ecosystem temporal stability and resilience due to short‐term evolution. A history of co‐occurrence can in part compensate for species loss, as can high plant diversity in part compensate for the missing opportunity of such adaptive adjustments. [ABSTRACT FROM AUTHOR]

Species extinction has reached unprecedented rates globally, and can cause unexpected ecological cascades. Since Europeans arrived in Australia, many endemic mammals have declined or become extinct, but their ecological roles and outcomes of their reintroduction for ecosystems are poorly understood. Using surveys and novel long‐term exclusion and disturbance experiments, we tested how digging mammal reintroduction affects predatory invertebrates. Mammal exclusion tended to decrease bare ground. Although scorpion burrow abundance increased with bare ground, mammals also had direct negative effects on scorpions. Increased disturbance alone decreased scorpion abundance, but other mechanisms, such as predation, also contributed to the mammal effect. Despite negative associations between scorpions and spiders, both groups increased and spider composition changed following mammal exclusion. Our long‐term research showed that threatened digging mammals drive ecosystem cascades, affecting biota through a variety of pathways. Reintroductions of locally extinct digging mammals can restore ecosystems, but ecosystem cascades may lead to unexpected restructuring. [ABSTRACT FROM AUTHOR]

Changes in species diversity often result from species losses and gains. The dynamic nature of beta diversity (spatial variation in species composition) that derives from such temporal species turnover, however, has received relatively little attention. Here, we disentangled extinction and colonization components of beta diversity by using the sets of species that went locally extinct and that newly colonized the study sites. We applied this concept of extinction and colonization beta diversity to ground vegetation communities that have been repeatedly surveyed in forests where fire and harvesting were experimentally applied. We first found that fire and harvesting caused no effect on beta diversity 2 yr after the treatments. From this result, we might conclude that they did not alter the ways in which species assemble across space. However, when we analyzed the extinction and colonization beta diversity between pre‐treatment and 2 yr after the treatments, both measures were found to be significantly lower in burned sites compared to unburned sites (i.e., the groups of excluded and newly colonized species both showed low beta diversity in the burned sites). These results indicate that the fire excluded similar subsets of species across space, making communities become more heterogeneous, but at the same time induced spatially uniform colonization of new species, causing communities to homogenize. Consequently, the effects of these two processes canceled each other out. The relative importance of extinction and colonization components per se also changed temporally after the treatments. Fire and harvesting showed synergetic negative impacts on extinction beta diversity between pre‐treatment and 10 yr after the treatments. Overall, analyses using extinction and colonization beta diversity allowed us to detect nonrandom disassembly and reassembly dynamics in ground vegetation communities. Our results suggest that common practices of analyzing beta diversity at one point in time can mask significant variation driven by disturbance. Acknowledging the extinction–colonization dynamics behind beta diversity is essential for understanding the spatiotemporal organization of biodiversity. [ABSTRACT FROM AUTHOR]

The addition of nonnative species and loss of native species has modified the composition of communities globally. Although changes in β‐diversity have been well documented, there is a need for studies incorporating multiple time periods, more than one dimension of biodiversity, and inclusion of nestedness and turnover components to understand the underlying mechanisms structuring community composition and assembly. Here, we examined temporal changes in functional dissimilarity of fish communities of the Laurentian Great Lakes and compared these changes to those of taxonomic dissimilarity by decade from 1870 to 2010. Jaccard‐derived functional dissimilarity index was used to quantify changes in functional β‐diversity within communities, between all possible pairs of communities, and using a multiple‐site index among all communities. β‐diversity was partitioned into components of nestedness and turnover, and changes were examined over time. Similar to patterns in taxonomic dissimilarity, each community functionally differentiated from the historical community of 1870, with Lake Superior changing the most (~24%) and Lake Ontario the least (~14%). Although communities have become taxonomically homogenized, functional β‐diversity among all communities has increased over time, indicating functional differentiation. This is likely due to functional similarity between the communities being historically high (i.e., ~88% similar in 1870). The higher taxonomic relative to functional turnover indicates that the species being replaced between communities are functionally redundant, which could occur given the harsh environmental conditions of the region and/or as a result of the recent glacial history of the region. High functional nestedness across communities reflects dispersal limitations, with smaller communities being functional subsets of large communities closer to source populations. The functional differentiation observed is likely due to nonnative species with functional traits unique to the region establishing or the loss of functionally redundant native species; however, it is important to note that patterns of homogenization were periodically observed through time. Our study demonstrates the possible factors regulating diversity in the Laurentian Great Lakes fish communities, that patterns of taxonomic and functional β‐diversity are dynamic over time and vary in the magnitude and direction of change, and that taxonomic diversity should not be used to predict changes in functional diversity. [ABSTRACT FROM AUTHOR]

Island systems are known to harbor disproportionate amounts of geographically restricted biodiversity and to experience high rates of species loss, and they ultimately represent critical systems with significant conservation values. However, knowledge of the biodiversity value of insular systems remains highly fragmented and incomplete for many groups of organisms, especially insects. This gap limits our understanding of their global significance for biodiversity and inhibits prioritization for future exploration and conservation efforts. Here, we developed a new database to present current knowledge on ants on 2678 islands globally, based on nominal species, and provide information on their native or exotic status. In total, this database contains 7010 ant species (44.6% of the known global ant fauna) that have been recorded on islands globally from 449,232 records. In addition, this database identifies 108 large islands (area > 200 km2) that have received no ant sampling efforts globally. This new data set provides the most comprehensive understanding of ant diversity and composition on islands globally, opening up new opportunities to address questions on a multitude of research questions and fields related to biogeography, ecology, and evolution. This data set also provides a roadmap for future exploration and conservation actions in connection with ants on islands as well as overall ant diversity, with updates available as new records and taxonomic updates are published. There are no copyright restrictions on this database and users should cite this data paper in publications when using the data. [ABSTRACT FROM AUTHOR]

Recent observations have found plant‐species‐specific fly‐host selection (i.e., specialization) of wasp parasitoids (wasps) in plant–fly–wasp (P–F–W) tripartite networks, yet no study has explored the dynamical implications of such high‐order specialization for the persistence of this network. Here we develop a patch‐dynamic framework for a unique P–F–W tripartite network with specialization observed in eastern Tibetan Plateau and explore its metacommunity robustness to habitat loss. We show that specialization in parasitoidism promotes fly species diversity, while the richness of both plant and wasp decreases. Compared to other two null models, real network structure favors plant species coexistence but increases the extinction risk for both flies and wasps. However, these effects of specialization and network structure would be weakened and ultimately disappear with increasing habitat loss. Interestingly, intermediate levels of habitat loss can maximize the diversity of flies and wasps, while increasing or decreasing habitat loss results in more species losses, supporting intermediate disturbance hypothesis. Finally, we observe that high levels of habitat loss initiate a bottom‐up cascade of species extinction from plants to both flies and wasps, resulting in a rapid collapse of the whole tripartite networks. Overall, this theoretical framework is the first attempt to characterize the dynamics of whole tripartite metacommunities interacting in realistic high‐order ways, offering new insights into complex multipartite networks. [ABSTRACT FROM AUTHOR]

Biodiversity loss is a hallmark of our times, but predicting its consequences is challenging. Ecological interactions form complex networks with multiple direct and indirect paths through which the impacts of an extinction may propagate. Here we show that accounting for these multiple paths connecting species is necessary to predict how extinctions affect the integrity of ecological networks. Using an approach initially developed for the study of information flow, we estimate indirect effects in plant–pollinator networks and find that even those species with several direct interactions may have much of their influence over others through long indirect paths. Next, we perform extinction simulations in those networks and show that although traditional connectivity metrics fail in the prediction of coextinction patterns, accounting for indirect interaction paths allows predicting species' vulnerability to the cascading effects of an extinction event. Embracing the structural complexity of ecological systems contributes towards a more predictive ecology, which is of paramount importance amid the current biodiversity crisis. [ABSTRACT FROM AUTHOR]

Omnivores have long been known to play an important role in determining the stability of ecological communities. Recent theoretical studies have suggested that they may also increase the resilience of their communities to habitat destruction, one of the major drivers of species extinctions globally. However, these outcomes were obtained for minimal food webs consisting of only a single omnivore and its prey species, while much more complex communities can be anticipated in nature. In this study, we undertake a systematic comparative analysis of the robustness of metacommunities containing various omnivory structures to habitat loss and fragmentation using a mathematical model. We observe that, in general, omnivores are better able to survive facing habitat destruction than specialist predators of similar trophic level. However, the community as a whole does not always benefit from the presence of omnivores, as they may drive their intraguild prey to extinction. We also analyze the frequency with which these modules occur in a set of empirical food webs, and demonstrate that variation in their rate of occurrence is consistent with our model predictions. Our findings demonstrate the importance of considering the complete food web in which an omnivore is embedded, suggesting that future study should focus on more holistic community analysis. [ABSTRACT FROM AUTHOR]

On St. Paul Island, a remnant of the Bering Land Bridge, woolly mammoths persisted until 5,600 yr BP with no known predators or competitors, providing a natural system for studying hypothesized environmental drivers of extinction. These include overheating due to rising temperatures, starvation, and drought. Here, we test these hypotheses using Niche Mapper and LPJ‐GUESS to mechanistically estimate mammoth metabolic rates and dietary and freshwater requirements and, from these, estimate variations in island carrying capacity on St. Paul for the last 17,000 yr. Population carrying capacity may have been several hundred individuals at the time of initial isolation from the mainland. Adult mammoths could have fasted for two to three months, indicating a necessary ability to access snow‐buried forage. During the Holocene, vegetation net primary productivity increased, but shrinking island area overrode increased net primary productivity (NPP), lowering carrying capacity to ~100 individuals. NPP and freshwater availability alternated as critical limiting factors for this island population during the environmental changes of the late Pleistocene and Holocene. Only two or three individuals could have been sustained by the freshwater surplus in crater lakes (up to 18 individuals under the most optimistic parameter sensitivity experiments), suggesting that the St. Paul mammoth population was highly dependent on coastal freshwater sources. The simulations are consistent with the available proxy data, while highlighting the need to retrieve new paleohydrological proxy records from the coastal lagoons to test model predictions. More broadly, these findings reinforce the vulnerability of island megaherbivore populations to resource limitation and extinction. [ABSTRACT FROM AUTHOR]

Disturbances often cause the disproportionate loss of foundation species but understanding how the frequency and severity of disturbance to such organisms influence biological communities remains unresolved. This gap in knowledge exists in part because of the rarity of ecologically meaningful studies capable of disentangling different elements of disturbance. Hence, we carried out a long‐term (9 yr), large‐scale (2,000 m2 plots), spatially replicated (4 sites) field experiment in which we manipulated disturbance to a globally distributed marine foundation species, the giant kelp Macrocystis pyrifera, and tracked community responses over time. To distinguish the effects of disturbance frequency and severity on the biodiversity and composition of temperate rocky reef communities, we simulated the repeated loss of giant kelp from destructive winter waves across a background of natural variation in disturbance. By following the response of over 200 taxa from the surrounding community, we discovered that the frequency of disturbance to giant kelp changed the biomass, diversity, and composition of community guilds in a manner commensurate with their dependence on the physical (i.e., benthic light and space), trophic (i.e., living and detrital biomass), and habitat (i.e., biogenic structure) resources mediated by this foundation species. Annual winter disturbance to giant kelp reduced living and detrital giant kelp biomass by 57% and 40%, respectively, enhanced bottom light by 22%, and halved the seafloor area covered by giant kelp holdfasts. Concomitantly, the biomass of understory algae and epilithic sessile invertebrates more than doubled, while the biomass of rock‐boring clams, mobile invertebrates, and fishes decreased 30–61%. Frequent loss of giant kelp boosted understory algal richness by 82% and lowered sessile invertebrate richness by 13% but did not affect the biodiversity of mobile fauna. In contrast to changes driven by disturbance frequency, interannual variation in the severity of disturbance to giant kelp had weaker, less consistent effects, causing only modest changes in assemblages of sessile invertebrates, mobile invertebrate herbivores, and fishes. Our results broaden the foundation species concept by demonstrating that repeated disturbance to a dominant habitat‐forming species can outweigh the influence of less frequent but severe disturbances for the surrounding community. [ABSTRACT FROM AUTHOR]

Nitrogen (N) additions have decreased species richness ( S) in hardwood forest herbaceous layers, yet the functional mechanisms for these decreases have not been explicitly evaluated. We tested two hypothesized mechanisms, random species loss ( RSL) and non-random species loss ( NRSL), in the hardwood forest herbaceous layer of a long-term, plot-scale, fertilization experiment in the central Appalachian Mountains, USA. Using a random thinning algorithm, we simulated changes in species densities under RSL and compared the simulated densities to the observed densities among N-fertilized (+N), N-fertilized and limed (+N+L), and reference ( REF) plots in regenerating forest stands. We found a lower S in the +N treatment across all survey years and determined that the reduction in S was a function of NRSL. Furthermore, non-random effects were observed in certain species, as they occurred at densities that were either higher or lower than expected due to RSL. Differential advantages were also observed among species between +N and +N+L treatments, suggesting that species responded to either the fertilization or acidification effects of N, though no consistent pattern emerged. Species nitrophily status was not a useful trait for predicting specific species losses, but was a significant factor when averaged across all treatments and sampling years. Our results provide strong evidence that declines in S in the forest herbaceous layer under N fertilization are due largely to NRSL and not simply a function of species rarity. [ABSTRACT FROM AUTHOR]

Habitat destruction, characterized by patch loss and fragmentation, is a major driving force of species extinction, and understanding its mechanisms has become a central issue in biodiversity conservation. Numerous studies have explored the effect of patch loss on food web dynamics, but ignored the critical role of patch fragmentation. Here we develop an extended patch-dynamic model for a tri-trophic omnivory system with trophic-dependent dispersal in fragmented landscapes. We found that species display different vulnerabilities to both patch loss and fragmentation, depending on their dispersal range and trophic position. The resulting trophic structure varies depending on the degree of habitat loss and fragmentation, due to a tradeoff between bottom-up control on omnivores (dominated by patch loss) and dispersal limitation on intermediate consumers (dominated by patch fragmentation). Overall, we find that omnivory increases system robustness to habitat destruction relative to a simple food chain. [ABSTRACT FROM AUTHOR]

The majority of humanity now lives in cities or towns, with this proportion expected to continue increasing for the foreseeable future. As novel ecosystems, urban areas offer an ideal opportunity to examine multi-scalar processes involved in community assembly as well as the role of human activities in modulating environmental drivers of biodiversity. Although ecologists have made great strides in recent decades at documenting ecological relationships in urban areas, much remains unknown, and we still need to identify the major ecological factors, aside from habitat loss, behind the persistence or extinction of species and guilds of species in cities. Given this paucity of knowledge, there is an immediate need to facilitate collaborative, interdisciplinary research on the patterns and drivers of biodiversity in cities at multiple spatial scales. In this review, we introduce a new conceptual framework for understanding the filtering processes that mold diversity of urban floras and faunas. We hypothesize that the following hierarchical series of filters influence species distributions in cities: (1) regional climatic and biogeographical factors; (2) human facilitation; (3) urban form and development history; (4) socioeconomic and cultural factors; and (5) species interactions. In addition to these filters, life history and functional traits of species are important in determining community assembly and act at multiple spatial scales. Using these filters as a conceptual framework can help frame future research needed to elucidate processes of community assembly in urban areas. Understanding how humans influence community structure and processes will aid in the management, design, and planning of our cities to best support biodiversity. [ABSTRACT FROM AUTHOR]

Extinctions have no simple determinism, but rather result from complex interplays between environmental factors and demographic-genetic feedback that occur at small population size. Inbreeding depression has been assumed to be a major trigger of extinction vortices, yet very few models have studied its consequences in dynamic populations with realistic population structure. Here we investigate the impact of Complementary Sex Determination (CSD) on extinction in parasitoid wasps and other insects of the order Hymenoptera. CSD is believed to induce enough inbreeding depression to doom simple small populations to extinction, but we suggest that in parasitoids CSD may have the opposite effect. Using a theoretical model combining the genetics of CSD and the population dynamics of host-parasitoid systems, we show that CSD can reduce the risk of parasitoid extinction by reducing fluctuations in population size. Our result suggests that inbreeding depression is not always a threat to population survival, and that considering trophic interactions may reverse some pervasive hypotheses on its demographic impact. [ABSTRACT FROM AUTHOR]

Theory on viability of small populations is well developed and has led to the standard methodology of population viability analysis ( PVA) to assess vulnerability of single species. However, more complex situations involving community dynamics or environmental change violate theoretical assumptions. Synthesizing concepts from population, community, and conservation ecology, we develop a generic theory on the viability of cyclic populations. The interplay of periodic population decline and demography causes varying risk patterns that aggregate during cycles and modify the temporal structure of viability. This variability is visualized and quantitatively assessed. For two standard viability metrics that summarize immediate extinction risk and the general long-term conditions of populations, we mathematically describe the impact of population cycles. Finally, we suggest and demonstrate PVA for cyclic populations that respond to, e.g., seasonality, interannual variation, or trophic interactions. Our theoretical and methodological advancement opens a route to viability analysis in food webs and trophic meta-communities and equips biodiversity conservation with a long-missing tool. [ABSTRACT FROM AUTHOR]

Bacteria are essential for many ecosystem services but our understanding of factors controlling their functioning is incomplete. While biodiversity has been identified as an important driver of ecosystem processes in macrobiotic communities, we know much less about bacterial communities. Due to the high diversity of bacterial communities, high functional redundancy is commonly proposed as explanation for a lack of clear effects of diversity. The generality of this claim has, however, been questioned. We present the results of an outdoor dilution-to-extinction experiment with four lake bacterial communities. The consequences of changes in bacterial diversity in terms of effective number of species, phylogenetic diversity, and functional diversity were studied for (1) bacterial abundance, (2) temporal stability of abundance, (3) nitrogen concentration, and (4) multifunctionality. We observed a richness gradient ranging from 15 to 280 operational taxonomic units (OTUs). Individual relationships between diversity and functioning ranged from negative to positive depending on lake, diversity dimension, and aspect of functioning. Only between phylogenetic diversity and abundance did we find a statistically consistent positive relationship across lakes. A literature review of 24 peer-reviewed studies that used dilution-to-extinction to manipulate bacterial diversity corroborated our findings: about 25% found positive relationships. Combined, these results suggest that bacteria-driven community functioning is relatively resistant to reductions in diversity. [ABSTRACT FROM AUTHOR]

Controversy exists over the cause and timing of the extinction of the Pleistocene megafauna. In the tropical Andes, deglaciation and associated rapid climate change began ~8,000 years before human arrival, providing an opportunity to separate the effects of climate change from human hunting on megafaunal extinction. We present a paleoecological record spanning the last 25,000 years from Lake Pacucha, Peru (3,100 m elevation). Fossil pollen, charcoal, diatoms, and the dung fungus Sporormiella, chronicle a two-stage megaherbivore population collapse. Sporormiella abundance, the proxy for megafaunal presence, fell sharply at ~21,000 years ago, but rebounded prior to a permanent decline between ~16,800 and 15,800 years ago. This two-stage decline in megaherbivores resulted in a functional extinction by ~15,800 years ago, 3,000 years earlier than known human occupation of the high Andes. Declining megaherbivore populations coincided with warm, wet intervals. Climatic instability and megafaunal population collapse triggered an ecological cascade that resulted in novel floral assemblages, and increases in woody species, fire frequency, and plant species that were sensitive to trampling. Our data revealed that Andean megafaunal populations collapsed due to positive feedbacks between habitat quality and climate change rather than human activity. [ABSTRACT FROM AUTHOR]

Global species extinction rates are orders of magnitude above the background rate documented in the fossil record. However, recent data syntheses have found mixed evidence for patterns of net species loss at local spatial scales. For example, two recent data meta-analyses have found that species richness is decreasing in some locations and is increasing in others. When these trends are combined, these papers argued there has been no net change in species richness, and suggested this pattern is globally representative of biodiversity change at local scales. Here we reanalyze results of these data syntheses and outline why this conclusion is unfounded. First, we show the datasets collated for these syntheses are spatially biased and not representative of the spatial distribution of species richness or the distribution of many primary drivers of biodiversity change. This casts doubt that their results are representative of global patterns. Second, we argue that detecting the trend in local species richness is very difficult with short time series and can lead to biased estimates of change. Reanalyses of the data detected a signal of study duration on biodiversity change, indicating net biodiversity loss is most apparent in studies of longer duration. Third, estimates of species richness change can be biased if species gains during post-disturbance recovery are included without also including species losses that occurred during the disturbance. Net species gains or losses should be assessed with respect to common baselines or reference communities. Ultimately, we need a globally coordinated effort to monitor biodiversity so that we can estimate and attribute human impacts as causes of biodiversity change. A combination of technologies will be needed to produce regularly updated global datasets of local biodiversity change to guide future policy. At this time the conclusion that there is no net change in local species richness is not the consensus state of knowledge. [ABSTRACT FROM AUTHOR]

The article discusses the decline of meadow spittlebugs, a previously abundant insect, along the California coast dealing with the effects of climate change with reasons of their reduced population sizes, impacts of temperature changes, species diversiy. Topics include Population decline, effects of climate change, and effects on growth and morphology of their goldenrod host plants.