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Abstract: One-dimensional vertical and three-dimensional fine-resolution numerical models of sediment transport have been developed and applied to the Torres Strait region of northern Australia. The one-dimensional model, driven by measured waves and currents, was calibrated against measured suspended sediment concentrations using a sequential data assimilation algorithm. The algorithm produced a good match between model and data, but this was achieved only by allowing some temporal variability in parameter values, suggesting that there were underlying uncertainties in the model structure and forcing data. Implications of the assimilation results to the accuracy of the numerical modelling are discussed and the need for observational programmes having an extensive spatial and temporal coverage is highlighted. The three-dimensional sediment model, driven by modelled waves and currents, simulates sediment transport over the shelf during the monsoon and trade-wind seasons covering 1997–2000. The model predicts strong seasonal variability of the sediment transport on the shelf attributed to seasonally varying hydrodynamics, and illustrates significant inter-annual variability of the sediment fluxes driven by extreme events. The developed model provides a platform for testing scientific hypothesis. With additional calibration, including uncertainty analysis, it can also be used in a management context. [Copyright &y& Elsevier]

Abstract: Ocean circulation influences nearly all aspects of the marine ecosystem. This study describes the water circulation patterns on time scales from hours to years across Torres Strait and adjacent gulfs and seas, including the north of the Great Barrier Reef. The tridimensional circulation model incorporated realistic atmospheric and oceanographic forcing, including winds, waves, tides, and large-scale regional circulation taken from global model outputs. Simulations covered a hindcast period of 8 years (i.e. 01/03/1997–31/12/2004), allowing the tidal, seasonal, and interannual flow characteristics to be investigated. Results indicated that the most energetic current patterns in Torres Strait were strongly dominated by the barotropic tide and its spring-neap cycle. However, longer-term flow through the strait was mainly controlled by prevailing winds. A dominant westward drift developed in summer over the southeasterly trade winds season, which then weakened and reversed in winter over the northwesterly monsoon winds season. The seasonal flow through Torres Strait was strongly connected to the circulation in the north of the Great Barrier Reef, but showed little connectivity with the coastal circulation in the Gulf of Papua. Interannual variability in Torres Strait was highest during the monsoon period, reflecting variability in wind forcing including the timing of the monsoon. The characteristics of the circulation were also discussed in relation to fine sediment transport. Turbidity level in Torres Strait is expected to peak at the end of the monsoon, while it is likely to be at a low at the end of the trade season, eventually leading to a critically low bottom light level which constitutes a severe risk of seagrass dieback. [Copyright &y& Elsevier]

Abstract: Widespread seagrass dieback in central Torres Strait, Australia has been anecdotally linked to the delivery of vast quantities of terrigenous sediments from New Guinea. The composition and distribution, and sedimentological and geochemical properties, of seabed and suspended sediments in north and central Torres Strait have been determined to investigate this issue. In northern Torres Strait, next to Saibai Island, seabed sediments comprise poorly sorted, muddy, mixed calcareous–siliciclastic sand. Seabed sediments in this region are dominated by aluminosilicate (terrigenous) phases. In central Torres Strait, next to Turnagain Island, seabed and suspended sediments comprise moderately sorted coarse to medium carbonate sand. Seabed sediments in this region are dominated by carbonate and magnesium (marine) phases. Mean Cu/Al ratios for seabed sediments next to Saibai Island are 0.01, and are similar to those found in New Guinea south coastal sediments by previous workers. Mean Cu/Al ratios for seabed sediments next to Turnagain Island are 0.02, indicating an enrichment of Cu in central Torres Strait. This enrichment comes from an exogenous biogenic source, principally from foraminifers and molluscs. We could not uniquely trace terrigenous sediments from New Guinea to Turnagain Island in central Torres Strait. If sediments are a factor in the widespread seagrass dieback in central Torres Strait, then our data suggest these are marine-derived sediments sourced from resuspension and advection from the immediate shelf areas and not terrigenous sediments dispersed from New Guinea rivers. This finding is consistent with outputs from recently developed regional hydrodynamic and sediment transport models. [Copyright &y& Elsevier]