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• A detection approach for late-autumn shoots of litchi tree based on UAV remote sensing is provided. • A remote sensing dataset of late-autumn shoots of litchi tree is constructed. • A deep learning model based on the combination of YOLOv5 and Swin-transformer is proposed. • The detection accuracy of late-autumn shoots in remote sensing images is improved. • It will provide technical support for other researchers on late-autumn shoots and orchards manager. Litchi is one of the most common economic fruits in southern China, however, the growth of late-autumn shoots of litchi hinders flower bud differentiation and reduces yield of fruit. The early identification of the late-autumn shoots is of great significance for orchard management to control shoots and then increase fruit yield. At present, the identification of late-autumn shoots still relies on manual methods, which is not suitable for smart orchard management in a large area due to low recognition efficiency and high subjectivity. Therefore, a convenient, fast and cost-effective method is urgently needed. In response to this problem, the paper proposes a method based on the combination of unmanned aerial vehicle (UAV) remote sensing and object detection algorithm to detect late-autumn shoots. For this purpose, a remote sensing dataset of late-autumn shoots of litchi is first constructed by UAV. An improved YOLOv5 algorithm called YOLOv5-SBiC is then developed for late-autumn shoots identification. In the YOLOv5-SBiC algorithm, the transformer module is introduced to speed up the convergence of the network and improve detection accuracy, the attention mechanism module is employed to help the model extracting details, and BiFPN is used to better solve the multi-scale problem in detecting and then improve the recognition effect of small-sized objects. In addition, CIOU is selected as the loss function of bounding boxes regression to achieve high-precision localization of the boxes. The test results demonstrate that the recognition accuracy of YOLOv5-SBiC reaches a relatively high value of 79.6%, which is 4.0% higher than that (75.6%) of the original YOLOv5 algorithm and 15.9% higher than that (63.7%) of the pure transformer algorithm. It's also demonstrated that YOLOv5-SBiC is more competitive than the mainstream target detection algorithms in the dataset of late-autumn shoots. [ABSTRACT FROM AUTHOR]