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The B chromosome of Crepis capillaris was isolated from the standard chromosomes by microdissection, and the chromosomal DNA amplified using the degenerate oligonucleotide-primed polymerase chain reaction (DOP-PCR). The PCR product was cloned and a B-specific library created and characterised. Southern and in situ hybridisation analyses of the DOP-PCR product from microdissected B chromosomes confirmed that the B chromosome is composed mainly of sequences also present in the A chromosomes but lacks the main repeated DNA families located in the A-chromosomal heterochromatin. From 100 clones analysed, 12% of the generated B-chromosomal library was shown to be composed of dispersed repeats located in both the A and B chromosomes. No B-specific repeated sequence was detected. One of the most abundant repeated DNAs within the library, the family B134, was further characterised. Repeating units show a sequence similarity range from 69% to 90% and are characterised by their richness in (CA)n repeats. In situ hybridisation revealed that members of this family are dispersed throughout the A and B chromosomes but are more concentrated in the pericentromeric heterochromatin of the B, indicating that the molecular organization of B heterochromatin is different from that of the A chromosomes. Compared with the A chromosomes, the Bs contain about 20,000 copies per micron more of the B134 sequence. This indicates that B134 was amplified on the B chromosome after its origin. The B134 sequences in the B chromosomes have also diverged from those on the A chromosomes. Although the DNA composition of A and B chromosomes is similar, Bs are evolving separately from A chromosomes at the molecular level.

The stable telocentric B-chromosomes of Hypochoeris maculata show an overall accumulation through the egg but a loss through the pollen. When crosses involve a single Bt the joint transmission gives an accumulation of 8%. The individual crosses, however, show great heterogeneity. Transmission through the megaspore ranged from 0.287 to 1.037 per B while pollen transmission was much less variable (0.360 to 0.560 per B) and close to the expected value. There is no intraplant correlation between pollen and egg transmission. Crosses repeated in different years show a clear positive correlation through the egg but no correlation through the pollen indicating that some B-transmission variation is of environmental origin. Despite this discrepancy, the outcome of crosses between plants of known transmission rate can be predicted. Stability of the A-chromosome complement is clearly reduced by the presence of B-chromosomes.

Allium schoenoprasum, 2n=16, has a single pair of highly acrocentric chromosomes which always have nucleolar-organiser regions on the short arms. In some British populations one or both homologues of submetacentric chromosome 7 may also carry a nucleolar-organiser region terminal on the long arm. These supernumerary satellites are simply inherited. Of the 13 populations examined, six were polymorphic for chromosome 7s. The frequency of chromosome 7s ranges from 0.130 to 0.825 and the distribution of the three karyotypes in all these populations corresponds to a HardyWeinberg equilibrium.

The annual species Hypochoeris glabra (2n = 10) and the perennial H. radicata (2n = 8) hybridise readily in nature and in experiment. During meiosis in F1 hybrids the maximum association is a chain of seven and a bivalent indicating that at least three interchanges differentiate the two genomes. The nucleolar chromosomes in the two species are homologous and form a ring bivalent. They are, however, differentiated since in the F1 hybrid only one nucleolar-organiser region is expressed. Although chromosomal differentiation reduces the egg fertility of F1 hybrids to about 1%, viable backcross hybrids to H. radicata as pollen parent have been experimentally produced and occur in natural populations. Backcrosses with 8, 9 and rarely 13 chromosomes are found and those with 2n = 8 are fully interfertile with H. radicata. Gene flow may therefore take place in natural populations across an aneuploid barrier. The direction of gene flow in Hypochoeris is probably unidirectional from the annual to the perennial.

Nine morphologically distinct euchromatic B-chromosomes have been identified in Allium schoenoprasum from the River Wye, South Wales. The most common type (89%) is telocentric (Bt−1) and it is likely that the non-standard Bs are derivatives of Bt−1 by deletion, centric shift and/or centric misdivision. New B-types have also been produced from standard Bs in controlled crosses. In general, the Bs are mitotically extremely stable, although occasional plants, particularly those carrying non-standard Bs, are conspicuously variable in their B-constitution between root-tip cells. In addition, B-chromosome number is enhanced in some anthers of about one third of plants. Behaviour of B-chromosomes during meiosis is described. Although there is little bivalent formation, less than 5% of the Bs are lost during meiosis in anthers. There is, however, no evidence of B-chromosome accumulation in the offspring of controlled crosses, usually a slight loss, and Bs have deleterious effects on aspects of vigour and fertility. Thus, no satisfactory explanation for populations with up to 65% B-containing individuals has yet been found.

Three structural chromosome changes in the plant Hypochoeris radicata 2n = 8 have been tested for their effects on chiasma formation: (1) centric fission of chromosome 1, (2) a whole arm exchange between chromosomes 1 and 3, and (3) an interchange between the long arm of chromosome 1 and the short arm of 2 which gives an effectively three-armed pachytene multiple. Mean chiasma frequencies were compared between full-sibs in families segregating for the rearrangements. In each family the chiasma frequency was higher in heterozygotes than basic homozygotes. The size of the chiasma increase is dependant on the number of additional potentially-paired segments in the complement at pachytene. Fission heterozygotes and 1/2 interchange heterozygotes, with one extra pairing region, both form about 0.45 more chiasmata per PMC than full-sib basic homozygotes. The 1/3 exchange, with two additional pairing regions, increases chiasma frequency by twice this, about 0.85 per PMC. Individuals homozygous for the centric fission maintain the raised chiasma level. The chiasma increase appears limited to the chromosome(s) affected by structural change with no detectable interchromosomal effect.

A desynaptic mutant of Hypochoeris radicata, 2n = 8, has been found in a population from France. The mutant is remarkable in that at metaphase-I over 90% of PMC's have a pair of univalents while two pairs are found in only 1% of cells. Only chromosome IV is affected by the desynapsis which is controlled by a single recessive gene. Bivalent chiasma frequency in cells with a pair of univalents is higher than in cells with complete bivalent formation indicating partial dependence of cell chiasma number on the availability of some factor within the anther. The F2, produced by full-sib mating, has a raised frequency of univalents in the chromosomes other than pair IV. The higher level results from enforced sib-mating of an obligate outbreeder and is not related to the action of the major gene. It is suggested that chiasma formation is controlled both polygenically and by major genes which operate on a hierarchical system. Some genes affect the behaviour of the entire complement while the action of others is specific to individual chromosomes.