1. KAT6A and ENL Form an Epigenetic Transcriptional Control Module to Drive Critical Leukemogenic Gene-Expression Programs
- Author
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Sixiang Yu, Suying Liu, Pamela J Sung, Neil Palmisiano, Zhennan Shi, Yiman Liu, Joshua Rico, David B. Sykes, Yuwei Qi, Sara E. Meyer, Jinyang Li, Janice M Reynaga, Ricardo Petroni, Ben Z. Stanger, Susumu Rokudai, Benjamin A. Garcia, Fei Lan, Salina Yuan, Fangxue Yan, M Andres Blanco, Liling Wan, and Jelena Milosevic
- Subjects
Regulator ,Nuclear Proteins ,Myeloid leukemia ,Oncogenes ,Biology ,Article ,Chromatin ,Leukemogenic ,Epigenesis, Genetic ,Neoplasm Proteins ,Cell biology ,Leukemia, Myeloid, Acute ,chemistry.chemical_compound ,Oncology ,chemistry ,Histone Acetyltransferase KAT6A ,hemic and lymphatic diseases ,Acetyllysine ,Transcriptional regulation ,Humans ,Epigenetics ,Histone Acetyltransferases ,Transcription Factors - Abstract
Epigenetic programs are dysregulated in acute myeloid leukemia (AML) and help enforce an oncogenic state of differentiation arrest. To identify key epigenetic regulators of AML cell fate, we performed a differentiation-focused CRISPR screen in AML cells. This screen identified the histone acetyltransferase KAT6A as a novel regulator of myeloid differentiation that drives critical leukemogenic gene-expression programs. We show that KAT6A is the initiator of a newly described transcriptional control module in which KAT6A-catalyzed promoter H3K9ac is bound by the acetyl-lysine reader ENL, which in turn cooperates with a network of chromatin factors to induce transcriptional elongation. Inhibition of KAT6A has strong anti-AML phenotypes in vitro and in vivo, suggesting that KAT6A small-molecule inhibitors could be of high therapeutic interest for mono-therapy or combinatorial differentiation-based treatment of AML. Significance: AML is a poor-prognosis disease characterized by differentiation blockade. Through a cell-fate CRISPR screen, we identified KAT6A as a novel regulator of AML cell differentiation. Mechanistically, KAT6A cooperates with ENL in a “writer–reader” epigenetic transcriptional control module. These results uncover a new epigenetic dependency and therapeutic opportunity in AML. This article is highlighted in the In This Issue feature, p. 587
- Published
- 2022
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