1. Rapid Exchange Between Free and Bound States in RNA–Dendrimer Polyplexes: Implications on the Mechanism of Delivery and Release
- Author
-
Yi Xue, Anisha Shakya, Casey A. Dougherty, Mark M. Banaszak Holl, and Hashim M. Al-Hashimi
- Subjects
Dendrimers ,Magnetic Resonance Spectroscopy ,Polymers and Plastics ,Stereochemistry ,Amidoamine ,Bioengineering ,02 engineering and technology ,Response Elements ,Transfection ,010402 general chemistry ,01 natural sciences ,Article ,Polyethylene Glycols ,Biomaterials ,chemistry.chemical_compound ,Dynamic light scattering ,Dendrimer ,Polyamines ,Materials Chemistry ,Chemistry ,Chemical shift ,RNA ,Nuclear magnetic resonance spectroscopy ,021001 nanoscience & nanotechnology ,Fluorescence ,0104 chemical sciences ,HIV-1 ,Biophysics ,Amine gas treating ,0210 nano-technology - Abstract
A combination of solution NMR, dynamic light scattering (DLS), and fluorescence quenching assays were employed to obtain insights into the dynamics and structural features of a polyplex system consisting of HIV-1 transactivation response element (TAR) and PEGylated generation 5 poly(amidoamine) dendrimer (G5-PEG). NMR chemical shift mapping and 13C spin relaxation based dynamics measurements depict the polyplex system as a highly dynamic assembly where the RNA, with its local structure and dynamics preserved, rapidly exchanges (< ms) between free and polyplex-bound forms, at least for the probed N:P ratios. Recovery of quenched fluorescence shows that RNA in the polyplex can be competitively exchanged over a wide range of amine to phosphate (N:P) charge ratios. The rapid exchange between free and bound forms may contribute to the mechanism by which RNA is released into the cell upon delivery while being protected by the polyplex environment from immediate degradation by nucleases.
- Published
- 2015