7,537 results
Search Results
2. Lapicque's 1907 paper: from frogs to integrate-and-fire
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Nicolas Brunel and Mark C. W. van Rossum
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Cognitive science ,Neurons ,Engineering ,General Computer Science ,business.industry ,Action Potentials ,Context (language use) ,History, 19th Century ,History, 20th Century ,Electric Stimulation ,Electrophysiology ,Animals ,Anura ,business ,Neuroscience ,Electric stimulation ,Biotechnology - Abstract
Exactly 100 years ago, Louis Lapicque published a paper on the excitability of nerves that is often cited in the context of integrate-and-fire neurons. We discuss Lapicque's contributions along with a translation of the original publication.
- Published
- 2007
3. Lapicque's 1907 paper: from frogs to integrate-and-fire.
- Author
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Brunel N and van Rossum MC
- Subjects
- Action Potentials physiology, Animals, Anura, Electric Stimulation methods, Electrophysiology history, History, 19th Century, History, 20th Century, Neurons physiology
- Abstract
Exactly 100 years ago, Louis Lapicque published a paper on the excitability of nerves that is often cited in the context of integrate-and-fire neurons. We discuss Lapicque's contributions along with a translation of the original publication.
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- 2007
- Full Text
- View/download PDF
4. ICANN '94: Call for papers
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- 1993
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5. Call for papers
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- 1982
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6. Call for papers
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- 1982
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- View/download PDF
7. Call for papers
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- 1982
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8. Call for papers
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- 1982
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- View/download PDF
9. Analysis of worldwide research in the field of cybernetics during 1997-2011.
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Singh, Virender, Perdigones, Alicia, García, José, Cañas-Guerrero, Ignacio, and Mazarrón, Fernando
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CYBERNETICS research ,COMPUTER science ,COMPUTER software ,BIBLIOMETRICS - Abstract
The study provides an overview of the research activity carried out in the field of cybernetics. To do so, all research papers from 1997 to 2011 (16,445 research papers) under the category of 'Computer Science, Cybernetics' of Web of Science have been processed using our in-house software which is developed specifically for this purpose. Among its multiple capabilities, this software analyses individual and compound keywords, quantifies productivity taking into account the work distribution, estimates the impact of each article and determines the collaborations established at different scales. Keywords analysis identifies the evolution of the most important research topics in the field of cybernetics and their specificity in biological aspects, as well as the research topics with lesser interest. The analysis of productivity, impact and collaborations provides a framework to assess research activity in a specific and realistic context. The geographical and institutional distribution of publications reveals the leading countries and research centres, analysing their relation to main research journals. Moreover, collaborations analysis reveals great differences in terms of internationalization and complexity of research networks. The results of this study may be very useful for the characterization and the decisions made by research in the field of cybernetics. [ABSTRACT FROM AUTHOR]
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- 2014
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10. Call for papers
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- 1982
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- View/download PDF
11. Perceptual adaptation during a balancing task in the seated posture and its theoretical model.
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Ito, Satoshi, Tomabechi, Kazuya, and Morita, Ryosuke
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POSTURE ,PERCEIVED control (Psychology) ,COMPUTER simulation ,MOTOR learning ,TASKS ,SITTING position - Abstract
This paper proposes a theoretical model of the control and perception mechanism in human balance. Human balance perception is evaluated by the subjective upright posture, the posture at which a person does not feel he/she is at an incline. Our balance experiments in the seated posture showed that the subjective upright posture changed after the balancing task where the participants needed to incline to maintain their balance. This paper aimed to explain this adaptive phenomenon by reproducing the experimental results using computer simulations. Hypothesizing that "humans gradually come to recognize the posture they need to take to maintain their balance as being upright," an adaptation rule for subjective upright posture is defined, so that it approaches the averaged posture in the period of the balancing task. For the balance control, center of pressure feedback is adopted. As a result, the similar changes in subjective upright posture are simulated with a two-link model with a base link, implying that our hypothesis is one possible explanation on the mechanism for human balance control and perception. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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12. Neuroscientific insights about computer vision models: a concise review.
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Susan, Seba
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- *
ARTIFICIAL neural networks , *CONVOLUTIONAL neural networks , *TRANSFORMER models , *NEURAL computers , *COMPUTER vision - Abstract
The development of biologically-inspired computational models has been the focus of study ever since the artificial neuron was introduced by McCulloch and Pitts in 1943. However, a scrutiny of literature reveals that most attempts to replicate the highly efficient and complex biological visual system have been futile or have met with limited success. The recent state-of the-art computer vision models, such as pre-trained deep neural networks and vision transformers, may not be biologically inspired per se. Nevertheless, certain aspects of biological vision are still found embedded, knowingly or unknowingly, in the architecture and functioning of these models. This paper explores several principles related to visual neuroscience and the biological visual pathway that resonate, in some manner, in the architectural design and functioning of contemporary computer vision models. The findings of this survey can provide useful insights for building futuristic bio-inspired computer vision models. The survey is conducted from a historical perspective, tracing the biological connections of computer vision models starting with the basic artificial neuron to modern technologies such as deep convolutional neural network (CNN) and spiking neural networks (SNN). One spotlight of the survey is a discussion on biologically plausible neural networks and bio-inspired unsupervised learning mechanisms adapted for computer vision tasks in recent times. [ABSTRACT FROM AUTHOR]
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- 2024
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13. Variational analysis of sensory feedback mechanisms in powerstroke–recovery systems.
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Yu, Zhuojun and Thomas, Peter J.
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CENTRAL pattern generators , *NONLINEAR dynamical systems , *MUSCULOSKELETAL system , *NONLINEAR oscillations , *HINDLIMB - Abstract
Although the raison d'etre of the brain is the survival of the body, there are relatively few theoretical studies of closed-loop rhythmic motor control systems. In this paper we provide a unified framework, based on variational analysis, for investigating the dual goals of performance and robustness in powerstroke–recovery systems. To demonstrate our variational method, we augment two previously published closed-loop motor control models by equipping each model with a performance measure based on the rate of progress of the system relative to a spatially extended external substrate—such as a long strip of seaweed for a feeding task, or progress relative to the ground for a locomotor task. The sensitivity measure quantifies the ability of the system to maintain performance in response to external perturbations, such as an applied load. Motivated by a search for optimal design principles for feedback control achieving the complementary requirements of efficiency and robustness, we discuss the performance–sensitivity patterns of the systems featuring different sensory feedback architectures. In a paradigmatic half-center oscillator-motor system, we observe that the excitation–inhibition property of feedback mechanisms determines the sensitivity pattern while the activation–inactivation property determines the performance pattern. Moreover, we show that the nonlinearity of the sigmoid activation of feedback signals allows the existence of optimal combinations of performance and sensitivity. In a detailed hindlimb locomotor system, we find that a force-dependent feedback can simultaneously optimize both performance and robustness, while length-dependent feedback variations result in significant performance-versus-sensitivity tradeoffs. Thus, this work provides an analytical framework for studying feedback control of oscillations in nonlinear dynamical systems, leading to several insights that have the potential to inform the design of control or rehabilitation systems. [ABSTRACT FROM AUTHOR]
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- 2024
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14. Making decisions in the dark basement of the brain: A look back at the GPR model of action selection and the basal ganglia.
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Humphries, Mark D. and Gurney, Kevin
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BASAL ganglia ,DECISION making ,BASEMENTS ,CYBERNETICS ,MODEL theory - Abstract
How does your brain decide what you will do next? Over the past few decades compelling evidence has emerged that the basal ganglia, a collection of nuclei in the fore- and mid-brain of all vertebrates, are vital to action selection. Gurney, Prescott, and Redgrave published an influential computational account of this idea in Biological Cybernetics in 2001. Here we take a look back at this pair of papers, outlining the "GPR" model contained therein, the context of that model's development, and the influence it has had over the past twenty years. Tracing its lineage into models and theories still emerging now, we are encouraged that the GPR model is that rare thing, a computational model of a brain circuit whose advances were directly built on by others. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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15. The scalable mammalian brain: emergent distributions of glia and neurons
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Jaap M. J. Murre, Janneke F.M. Jehee, and Brein en Cognitie (Psychologie, FMG)
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General Computer Science ,Glia-to-neuron index ,Neuron number ,Models, Neurological ,Biology ,Cortex (anatomy) ,medicine ,Animals ,Humans ,Mammals ,Neurons ,Original Paper ,Mechanism (biology) ,Brain ,Comparative neuroanatomy ,Organ Size ,Mammalian brain ,Neuroanatomy ,medicine.anatomical_structure ,nervous system ,Brain size ,Scalability ,Neuroglia ,Neuron ,Neuroscience ,Computer Science(all) ,Biotechnology - Abstract
In this paper, we demonstrate that two characteristic properties of mammalian brains emerge when scaling-up modular, cortical structures. Firstly, the glia-to-neuron ratio is not constant across brains of different sizes: large mammalian brains have more glia per neuron than smaller brains. Our analyses suggest that if one assumes that glia number is proportional to wiring, a particular quantitative relationship emerges between brain size and glia-to-neuron ratio that fits the empirical data. Secondly, many authors have reported that the number of neurons underlying one mm(2) of mammalian cortex is remarkably constant, across both areas and species. Here, we will show that such a constancy emerges when enlarging modular, cortical brain structures. Our analyses thus corroborate recent studies on the mammalian brain as a scalable architecture, providing a possible mechanism to explain some of the principles, constancies and rules that hold across brains of different size.
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- 2008
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16. Cortical stimulation in aphasia following ischemic stroke: toward model-guided electrical neuromodulation.
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Beuter, Anne, Balossier, Anne, Vassal, François, Hemm, Simone, and Volpert, Vitaly
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APHASIA ,LANGUAGE disorders ,BRAIN stimulation ,ELECTRIC stimulation ,STROKE ,BRAIN waves - Abstract
The aim of this paper is to integrate different bodies of research including brain traveling waves, brain neuromodulation, neural field modeling and post-stroke language disorders in order to explore the opportunity of implementing model-guided, cortical neuromodulation for the treatment of post-stroke aphasia. Worldwide according to WHO, strokes are the second leading cause of death and the third leading cause of disability. In ischemic stroke, there is not enough blood supply to provide enough oxygen and nutrients to parts of the brain, while in hemorrhagic stroke, there is bleeding within the enclosed cranial cavity. The present paper focuses on ischemic stroke. We first review accumulating observations of traveling waves occurring spontaneously or triggered by external stimuli in healthy subjects as well as in patients with brain disorders. We examine the putative functions of these waves and focus on post-stroke aphasia observed when brain language networks become fragmented and/or partly silent, thus perturbing the progression of traveling waves across perilesional areas. Secondly, we focus on a simplified model based on the current literature in the field and describe cortical traveling wave dynamics and their modulation. This model uses a biophysically realistic integro-differential equation describing spatially distributed and synaptically coupled neural networks producing traveling wave solutions. The model is used to calculate wave parameters (speed, amplitude and/or frequency) and to guide the reconstruction of the perturbed wave. A stimulation term is included in the model to restore wave propagation to a reasonably good level. Thirdly, we examine various issues related to the implementation model-guided neuromodulation in the treatment of post-stroke aphasia given that closed-loop invasive brain stimulation studies have recently produced encouraging results. Finally, we suggest that modulating traveling waves by acting selectively and dynamically across space and time to facilitate wave propagation is a promising therapeutic strategy especially at a time when a new generation of closed-loop cortical stimulation systems is about to arrive on the market. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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17. Neural kernels for recursive support vector regression as a model for episodic memory.
- Author
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Leibold, Christian
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EPISODIC memory ,REGRESSION analysis ,HIPPOCAMPUS (Brain) - Abstract
Retrieval of episodic memories requires intrinsic reactivation of neuronal activity patterns. The content of the memories is thereby assumed to be stored in synaptic connections. This paper proposes a theory in which these are the synaptic connections that specifically convey the temporal order information contained in the sequences of a neuronal reservoir to the sensory-motor cortical areas that give rise to the subjective impression of retrieval of sensory motor events. The theory is based on a novel recursive version of support vector regression that allows for efficient continuous learning that is only limited by the representational capacity of the reservoir. The paper argues that hippocampal theta sequences are a potential neural substrate underlying this reservoir. The theory is consistent with confabulations and post hoc alterations of existing memories. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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18. Human motor learning is robust to control-dependent noise.
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Pang, Bo, Cui, Leilei, and Jiang, Zhong-Ping
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MOTOR learning ,REINFORCEMENT learning ,CENTRAL nervous system ,ADAPTIVE control systems ,NOISE ,TRANSCRANIAL direct current stimulation - Abstract
Noises are ubiquitous in sensorimotor interactions and contaminate the information provided to the central nervous system (CNS) for motor learning. An interesting question is how the CNS manages motor learning with imprecise information. Integrating ideas from reinforcement learning and adaptive optimal control, this paper develops a novel computational mechanism to explain the robustness of human motor learning to the imprecise information, caused by control-dependent noise that exists inherently in the sensorimotor systems. Starting from an initial admissible control policy, in each learning trial the mechanism collects and uses the noisy sensory data (caused by the control-dependent noise) to form an imprecise evaluation of the performance of the current policy and then constructs an updated policy based on the imprecise evaluation. As the number of learning trials increases, the generated policies mathematically provably converge to a (potentially small) neighborhood of the optimal policy under mild conditions, despite the imprecise information in the learning process. The mechanism directly synthesizes the policies from the sensory data, without identifying an internal forward model. Our preliminary computational results on two classic arm reaching tasks are in line with experimental observations reported in the literature. The model-free control principle proposed in the paper sheds more lights into the inherent robustness of human sensorimotor systems to the imprecise information, especially control-dependent noise, in the CNS. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
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19. Neural coding of space by time.
- Author
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Löffler, Hubert, Gupta, Daya Shankar, and Bahmer, Andreas
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- *
SPACE-time codes , *PHASE coding , *MEMBRANE potential , *OSCILLATIONS , *PHYSICS - Abstract
The intertwining of space and time poses a significant scientific challenge, transcending disciplines from philosophy and physics to neuroscience. Deciphering neural coding, marked by its inherent spatial and temporal dimensions, has proven to be a complex task. In this paper, we present insights into temporal and spatial modes of neural coding and their intricate interplay, drawn from neuroscientific findings. We illustrate the conversion of a purely spatial input into the temporal form of a singular spike train, demonstrating storage, transmission to remote locations, and recall through spike bursts corresponding to Sharp Wave Ripples. Moreover, the converted temporal representation can be transformed back into a spatiotemporal pattern. The principles of the transformation process are illustrated using a simple feed-forward spiking neural network. The frequencies and phases of Subthreshold Membrane potential Oscillations play a pivotal role in this framework. The model offers insights into information multiplexing and phenomena such as stretching or compressing time of spike patterns. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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20. Statistics and geometry of orientation selectivity in primary visual cortex
- Author
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Stefan Rotter and Sadra Sadeh
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General Computer Science ,Models, Neurological ,Geometry ,Visual system ,Orientation (graph theory) ,Columnar structure ,Lateral geniculate nucleus ,Brain mapping ,Primary visual cortex ,Orientation ,Statistics ,Feature (machine learning) ,medicine ,Animals ,Humans ,Visual Pathways ,Visual Cortex ,Mathematics ,Orientation selectivity ,Neurons ,Original Paper ,Brain Mapping ,Random connectivity ,Visual cortex ,medicine.anatomical_structure ,Receptive field ,Orientation map ,Visual Fields ,Neuroscience ,Photic Stimulation ,Ocular dominance column ,Computer Science(all) ,Biotechnology - Abstract
Orientation maps are a prominent feature of the primary visual cortex of higher mammals. In macaques and cats, for example, preferred orientations of neurons are organized in a specific pattern, where cells with similar selectivity are clustered in iso-orientation domains. However, the map is not always continuous, and there are pinwheel-like singularities around which all orientations are arranged in an orderly fashion. Although subject of intense investigation for half a century now, it is still not entirely clear how these maps emerge and what function they might serve. Here, we suggest a new model of orientation selectivity that combines the geometry and statistics of clustered thalamocortical afferents to explain the emergence of orientation maps. We show that the model can generate spatial patterns of orientation selectivity closely resembling the maps found in cats or monkeys. Without any additional assumptions, we further show that the pattern of ocular dominance columns is inherently connected to the spatial pattern of orientation.
- Published
- 2013
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21. Mechanism of suppression of sustained neuronal spiking under high-frequency stimulation
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Kestutis Pyragas, Peter A. Tass, and Viktor Novičenko
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High-frequency deep brain stimulation ,General Computer Science ,Models, Neurological ,Biophysics ,Action Potentials ,Neural Inhibition ,Stimulation ,Subthalamic Nucleus ,ddc:570 ,medicine ,Animals ,Humans ,Neurons ,Membrane potential ,Original Paper ,Subthalamic nucleus model neuron ,Resting state fMRI ,Method of averaging ,Electric Stimulation ,Hodgkin–Huxley model ,Subthalamic nucleus ,Amplitude ,medicine.anatomical_structure ,nervous system ,Parkinson’s disease ,Neuron ,Neuroscience ,Mathematics ,Computer Science(all) ,Biotechnology - Abstract
Using Hodgkin---Huxley and isolated subthalamic nucleus (STN) model neurons as examples, we show that electrical high-frequency stimulation (HFS) suppresses sustained neuronal spiking. The mechanism of suppression is explained on the basis of averaged equations derived from the original neuron equations in the limit of high frequencies. We show that for frequencies considerably greater than the reciprocal of the neuron's characteristic time scale, the result of action of HFS is defined by the ratio between the amplitude and the frequency of the stimulating signal. The effect of suppression emerges due to a stabilization of the neuron's resting state or due to a stabilization of a low-amplitude subthreshold oscillation of its membrane potential. Intriguingly, although we neglect synaptic dynamics, neural circuity as well as contribution of glial cells, the results obtained with the isolated high-frequency stimulated STN model neuron resemble the clinically observed relations between stimulation amplitude and stimulation frequency required to suppress Parkinsonian tremor.
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- 2013
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22. An investigation of the phase locking index for measuring of interdependency of cortical source signals recorded in the EEG
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Johan Arends, Jan W. M. Bergmans, P.A.M. Griep, Pierre J. M. Cluitmans, Chin Keong Ho, Evgeny Verbitskiy, Andrei Sazonov, Paul Boon, Signal Processing Systems, and Medical signal processing
- Subjects
General Computer Science ,Computer science ,Models, Neurological ,Electroencephalography ,Synchronization ,Correlation ,Coupling ,Interdependency ,Electronic engineering ,medicine ,Humans ,Coherence (signal processing) ,Distribution function ,EEG ,Sensitivity (control systems) ,Cortical sources ,Cerebral Cortex ,Original Paper ,Signal processing ,medicine.diagnostic_test ,business.industry ,Contrast (statistics) ,Signal Processing, Computer-Assisted ,Pattern recognition ,Contrast ,Phase synchronization ,Artificial intelligence ,business ,Computer Science(all) ,Phase locking ,Model ,Biotechnology - Abstract
The phase locking index (PLI) was introduced to quantify in a statistical sense the phase synchronization of two signals. It has been commonly used to process biosignals. In this article, we investigate the PLI for measuring the interdependency of cortical source signals (CSSs) recorded in the Electroencephalogram (EEG). To this end, we consider simple analytical models for the mapping of simulated CSSs into the EEG. For these models, the PLI is investigated analytically and through numerical simulations. An evaluation is made of the sensitivity of the PLI to the amount of crosstalk between the sources through biological tissues of the head. It is found that the PLI is a useful interdependency measure for CSSs, especially when the amount of crosstalk is small. Another common interdependency measure is the coherence. A direct comparison of both measures has not been made in the literature so far. We assess the performance of the PLI and coherence for estimation and detection purposes based on, respectively, a normalized variance and a novel statistical measure termed contrast. Based on these performance measures, it is found that the PLI is similar or better than the CM in most cases. This result is also confirmed through analysis of EEGs recorded from epileptic patients.
- Published
- 2009
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23. Mathematization of nature: how it is done.
- Author
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van Hemmen, J. Leo
- Subjects
HISTORY of science ,NEUROBIOLOGY - Abstract
Natural phenomena can be quantitatively described by means of mathematics, which is actually the only way of doing so. Physics is a convincing example of the mathematization of nature. This paper gives an answer to the question of how mathematization of nature is done and illustrates the answer. Here nature is to be taken in a wide sense, being a substantial object of study in, among others, large domains of biology, such as epidemiology and neurobiology, chemistry, and physics, the most outspoken example. It is argued that mathematization of natural phenomena needs appropriate core concepts that are intimately connected with the phenomena one wants to describe and explain mathematically. Second, there is a scale on and not beyond which a specific description holds. Different scales allow for different conceptual and mathematical descriptions. This is the scaling hypothesis, which has meanwhile been confirmed on many occasions. Furthermore, a mathematical description can, as in physics, but need not be universally valid, as in biology. Finally, the history of science shows that only an intensive gauging of theory, i.e., mathematical description, by experiment leads to progress. That is, appropriate core concepts and appropriate scales are a necessary condition for mathematizing nature, and so is its verification by experiment. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
24. Active inference, eye movements and oculomotor delays
- Author
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Laurent U, Perrinet, Rick A, Adams, and Karl J, Friston
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Original Paper ,Time Factors ,Eye Movements ,Models, Neurological ,Motion Perception ,Tracking eye movements ,Bayes Theorem ,Generalised coordinates ,Axons ,Pursuit, Smooth ,Variational free energy ,Oculomotor delays ,Reaction Time ,Active inference ,Humans ,Computer Simulation ,Smooth pursuit eye movements ,Psychomotor Performance - Abstract
This paper considers the problem of sensorimotor delays in the optimal control of (smooth) eye movements under uncertainty. Specifically, we consider delays in the visuo-oculomotor loop and their implications for active inference. Active inference uses a generalisation of Kalman filtering to provide Bayes optimal estimates of hidden states and action in generalised coordinates of motion. Representing hidden states in generalised coordinates provides a simple way of compensating for both sensory and oculomotor delays. The efficacy of this scheme is illustrated using neuronal simulations of pursuit initiation responses, with and without compensation. We then consider an extension of the generative model to simulate smooth pursuit eye movements—in which the visuo-oculomotor system believes both the target and its centre of gaze are attracted to a (hidden) point moving in the visual field. Finally, the generative model is equipped with a hierarchical structure, so that it can recognise and remember unseen (occluded) trajectories and emit anticipatory responses. These simulations speak to a straightforward and neurobiologically plausible solution to the generic problem of integrating information from different sources with different temporal delays and the particular difficulties encountered when a system—like the oculomotor system—tries to control its environment with delayed signals.
- Published
- 2013
25. A novel method for the identification of synchronization effects in multichannel ECoG with an application to epilepsy
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A, Graef, M, Hartmann, C, Flamm, C, Baumgartner, M, Deistler, and T, Kluge
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Brain Mapping ,Original Paper ,Epilepsy ,Electroencephalography Phase Synchronization ,Partial directed coherence ,Electroencephalography ,Synchronization ,Models, Biological ,ECoG ,Nonlinear Dynamics ,Dynamic input channel selection ,Humans ,Regression Analysis ,Algorithms - Abstract
In this paper, we present a novel method for the identification of synchronization effects in multichannel electrocorticograms (ECoG). Based on autoregressive modeling, we define a dependency measure termed extrinsic-to-intrinsic power ratio (EIPR) which quantifies directed coupling effects in the time domain. Hereby, a dynamic input channel selection algorithm assures the estimation of the model parameters despite the strong spatial correlation among the high number of involved ECoG channels. We compare EIPR to the partial directed coherence, show its ability to indicate Granger causality and successfully validate a signal model. Applying EIPR to ictal ECoG data of patients suffering from temporal lobe epilepsy allows us to identify the electrodes of the seizure onset zone. The results obtained by the proposed method are in good accordance with the clinical findings.
- Published
- 2012
26. Further study on 1/f fluctuations observed in central single neurons during REM sleep.
- Author
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Grüneis, F., Nakao, M., Mizutani, Y., Yamamoto, M., Meesmann, M., and Musha, T.
- Abstract
Recently, 1/ f fluctuations have been discovered in the single-unit activity of mesencephalic reticular formation (MRF) neurons during REM sleep. In a previous paper, such behavior could satisfyingly be interpreted on the basis of the clustering Poisson process. The question of applicability of this model to other MRF neurons remained unanswered. The present paper reports on 1/ f fluctuations in 12 MRF neurons all of which can satisfyingly be modeled by the clustering Poisson process. [ABSTRACT FROM AUTHOR]
- Published
- 1993
- Full Text
- View/download PDF
27. Distribution of axon diameters in cortical white matter: an electron-microscopic study on three human brains and a macaque
- Author
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Hans-Joachim Wagner, Robert Miller, Almut Schüz, Daniel Liewald, and Nikos K. Logothetis
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Male ,Electron Microscope Tomography ,Axon calibre ,General Computer Science ,Population ,Corpus callosum ,Functional Laterality ,White matter ,medicine ,Electron microscopy ,Animals ,Humans ,education ,Myelin Sheath ,Aged ,Physics ,Aged, 80 and over ,Cerebral Cortex ,education.field_of_study ,Original Paper ,Conduction time ,Diffusion weighted imaging ,Anatomy ,Human brain ,Fascicle ,Macaca mulatta ,Axons ,medicine.anatomical_structure ,Frontal lobe ,Myelin ,Brain size ,Neuroscience ,Computer Science(all) ,Biotechnology ,Diffusion MRI - Abstract
The aim of this study was to obtain information on the axonal diameters of cortico-cortical fibres in the human brain, connecting distant regions of the same hemisphere via the white matter. Samples for electron microscopy were taken from the region of the superior longitudinal fascicle and from the transitional white matter between temporal and frontal lobe where the uncinate and inferior occipitofrontal fascicle merge. We measured the inner diameter of cross sections of myelinated axons. For comparison with data from the literature on the human corpus callosum, we also took samples from that region. For comparison with well-fixed material, we also included samples from corresponding regions of a monkey brain (Macaca mulatta). Fibre diameters in human brains ranged from 0.16 to 9 \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\upmu \hbox {m}$$\end{document}. Distributions of diameters were similar in the three systems of cortico-cortical fibres investigated, both in humans and the monkey, with most of the average values below 1 \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\upmu $$\end{document}m diameter and a small population of much thicker fibres. Within individual human brains, the averages were larger in the superior longitudinal fascicle than in the transitional zone between temporal and frontal lobe. An asymmetry between left and right could be found in one of the human brains, as well as in the monkey brain. A correlation was also found between the thickness of the myelin sheath and the inner axon diameter for axons whose calibre was greater than about 0.6 \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\upmu \hbox {m}$$\end{document}. The results are compared to white matter data in other mammals and are discussed with respect to conduction velocity, brain size, cognition, as well as diffusion weighted imaging studies.
- Published
- 2014
28. Learning to reach by reinforcement learning using a receptive field based function approximation approach with continuous actions
- Author
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Tamim Asfour, Florentin Wörgötter, and Minija Tamosiunaite
- Subjects
573.8 ,Function approximation ,General Computer Science ,612.8 ,Q-learning ,02 engineering and technology ,Robot learning ,Biomedicine ,Complexity ,Neurobiology ,Computer Appl. in Life Sciences ,Neurosciences ,Bioinformatics ,03 medical and health sciences ,0302 clinical medicine ,Reinforcement learning ,0202 electrical engineering, electronic engineering, information engineering ,Learning ,Robot control ,Mathematics ,Original Paper ,business.industry ,Equipment Design ,Robotics ,Robot ,020201 artificial intelligence & image processing ,Artificial intelligence ,Scenario testing ,business ,Robotic arm ,030217 neurology & neurosurgery ,Biotechnology ,Computer Science(all) - Abstract
Reinforcement learning methods can be used in robotics applications especially for specific target-oriented problems, for example the reward-based recalibration of goal directed actions. To this end still relatively large and continuous state-action spaces need to be efficiently handled. The goal of this paper is, thus, to develop a novel, rather simple method which uses reinforcement learning with function approximation in conjunction with different reward-strategies for solving such problems. For the testing of our method, we use a four degree-of-freedom reaching problem in 3D-space simulated by a two-joint robot arm system with two DOF each. Function approximation is based on 4D, overlapping kernels (receptive fields) and the state-action space contains about 10,000 of these. Different types of reward structures are being compared, for example, reward-on- touching-only against reward-on-approach. Furthermore, forbidden joint configurations are punished. A continuous action space is used. In spite of a rather large number of states and the continuous action space these reward/punishment strategies allow the system to find a good solution usually within about 20 trials. The efficiency of our method demonstrated in this test scenario suggests that it might be possible to use it on a real robot for problems where mixed rewards can be defined in situations where other types of learning might be difficult. peerReviewed
- Published
- 2008
29. Design of a cybernetic hand for perception and action
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Maria Chiara Carrozza, Christian Cipriani, Silvestro Micera, G. Cappiello, Lucia Beccai, and Benoni B. Edin
- Subjects
Engineering ,General Computer Science ,media_common.quotation_subject ,Artificial Limbs ,Prosthesis Design ,Amputees ,Perception ,Cybernetics ,Humans ,media_common ,Iterative and incremental development ,Original Paper ,Hand Strength ,business.industry ,Underactuation ,GRASP ,Control engineering ,Modular design ,Hand ,Interfacing ,Touch ,Control system ,business ,Algorithms ,Biotechnology ,Computer Science(all) - Abstract
Strong motivation for developing new prosthetic hand devices is provided by the fact that low functionality and controllability—in addition to poor cosmetic appearance—are the most important reasons why amputees do not regularly use their prosthetic hands. This paper presents the design of the CyberHand, a cybernetic anthropomorphic hand intended to provide amputees with functional hand replacement. Its design was bio-inspired in terms of its modular architecture, its physical appearance, kinematics, sensorization, and actuation, and its multilevel control system. Its underactuated mechanisms allow separate control of each digit as well as thumb–finger opposition and, accordingly, can generate a multitude of grasps. Its sensory system was designed to provide proprioceptive information as well as to emulate fundamental functional properties of human tactile mechanoreceptors of specific importance for grasp-and-hold tasks. The CyberHand control system presumes just a few efferent and afferent channels and was divided in two main layers: a high-level control that interprets the user’s intention (grasp selection and required force level) and can provide pertinent sensory feedback and a low-level control responsible for actuating specific grasps and applying the desired total force by taking advantage of the intelligent mechanics. The grasps made available by the high-level controller include those fundamental for activities of daily living: cylindrical, spherical, tridigital (tripod), and lateral grasps. The modular and flexible design of the CyberHand makes it suitable for incremental development of sensorization, interfacing, and control strategies and, as such, it will be a useful tool not only for clinical research but also for addressing neuroscientific hypotheses regarding sensorimotor control.
- Published
- 2006
30. Regularized logistic regression and multiobjective variable selection for classifying MEG data.
- Author
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Santana, Roberto, Bielza, Concha, and Larrañaga, Pedro
- Subjects
LOGISTIC regression analysis ,MATHEMATICAL variables ,ACCURACY ,MAGNETOENCEPHALOGRAPHY ,MACHINE learning ,ALGORITHMS ,MATHEMATICAL optimization ,PROBABILISTIC generative models - Abstract
This paper addresses the question of maximizing classifier accuracy for classifying task-related mental activity from Magnetoencelophalography (MEG) data. We propose the use of different sources of information and introduce an automatic channel selection procedure. To determine an informative set of channels, our approach combines a variety of machine learning algorithms: feature subset selection methods, classifiers based on regularized logistic regression, information fusion, and multiobjective optimization based on probabilistic modeling of the search space. The experimental results show that our proposal is able to improve classification accuracy compared to approaches whose classifiers use only one type of MEG information or for which the set of channels is fixed a priori. [ABSTRACT FROM AUTHOR]
- Published
- 2012
- Full Text
- View/download PDF
31. Revealing instances of coordination among multiple cortical areas
- Author
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Moshe Abeles
- Subjects
Male ,Higher brain functions ,General Computer Science ,Brain activity and meditation ,Movement ,Electroencephalography ,Brain mapping ,Cortex (anatomy) ,medicine ,Humans ,Nervous System Physiological Phenomena ,Cerebral Cortex ,Brain Mapping ,Original Paper ,MEG ,medicine.diagnostic_test ,Magnetoencephalography ,Time perception ,Binding ,Hand ,Brain Waves ,medicine.anatomical_structure ,Cerebral cortex ,Time Perception ,Spectrogram ,Cortical current dipoles ,Psychology ,Neuroscience ,Psychomotor Performance ,Biotechnology ,Computer Science(all) - Abstract
Cognitive functions must involve interactions between several (perhaps many) cortical regions. The instances of such interactions may not be tightly time locked to any external cue. Thus averaging over repeated trials of brain activity or its spectrograms may miss these instances. Here, coordinated activity among multiple cortical locations is revealed in ongoing activity with millisecond accuracy without the need for averaging over time or frequencies. This is based on reconstructions of the cortical current dipole amplitudes at multiple points from MEG recordings. In these current dipole traces, instances of brief activity undulations (BAUs) are automatically detected and used to reveal where and when cortical points interact. The article shows that these BAUs truly represent the reorganization of activity at the cortex and are strongly connected to behavior.
- Published
- 2013
32. Exploration of motion inhibition for the suppression of false positives in biologically inspired small target detection algorithms from a moving platform.
- Author
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Melville-Smith, Aaron, Finn, Anthony, Uzair, Muhammad, and Brinkworth, Russell S. A.
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OBJECT recognition (Computer vision) ,ALGORITHMS ,VISUAL pathways ,OPTICAL flow ,MOTION ,MICROFLUIDICS - Abstract
Detecting small moving targets against a cluttered background in visual data is a challenging task. The main problems include spatio-temporal target contrast enhancement, background suppression and accurate target segmentation. When targets are at great distances from a non-stationary camera, the difficulty of these challenges increases. In such cases the moving camera can introduce large spatial changes between frames which may cause issues in temporal algorithms; furthermore targets can approach a single pixel, thereby affecting spatial methods. Previous literature has shown that biologically inspired methods, based on the vision systems of insects, are robust to such conditions. It has also been shown that the use of divisive optic-flow inhibition with these methods enhances the detectability of small targets. However, the location within the visual pathway the inhibition should be applied was ambiguous. In this paper, we investigated the tunings of some of the optic-flow filters and use of a nonlinear transform on the optic-flow signal to modify motion responses for the purpose of suppressing false positives and enhancing small target detection. Additionally, we looked at multiple locations within the biologically inspired vision (BIV) algorithm where inhibition could further enhance detection performance, and look at driving the nonlinear transform with a global motion estimate. To get a better understanding of how the BIV algorithm performs, we compared to other state-of-the-art target detection algorithms, and look at how their performance can be enhanced with the optic-flow inhibition. Our explicit use of the nonlinear inhibition allows for the incorporation of a wider dynamic range of inhibiting signals, along with spatio-temporal filter refinement, which further increases target-background discrimination in the presence of camera motion. Extensive experiments shows that our proposed approach achieves an improvement of 25% over linearly conditioned inhibition schemes and 2.33 times the detection performance of the BIV model without inhibition. Moreover, our approach achieves between 10 and 104 times better detection performance compared to any conventional state-of-the-art moving object detection algorithm applied to the same, highly cluttered and moving scenes. Applying the nonlinear inhibition to other algorithms showed that their performance can be increased by up to 22 times. These findings show that the application of optic-flow- based signal suppression should be applied to enhance target detection from moving platforms. Furthermore, they indicate where best to look for evidence of such signals within the insect brain. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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33. Contrast independent biologically inspired translational optic flow estimation.
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Skelton, Phillip S. M., Finn, Anthony, and Brinkworth, Russell S. A.
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OPTICAL flow ,ROTATIONAL motion ,TRANSLATIONAL motion ,VISUAL pathways ,BIOLOGICAL systems ,MOTION - Abstract
The visual systems of insects are relatively simple compared to humans. However, they enable navigation through complex environments where insects perform exceptional levels of obstacle avoidance. Biology uses two separable modes of optic flow to achieve this: rapid gaze fixation (rotational motion known as saccades); and the inter-saccadic translational motion. While the fundamental process of insect optic flow has been known since the 1950's, so too has its dependence on contrast. The surrounding visual pathways used to overcome environmental dependencies are less well known. Previous work has shown promise for low-speed rotational motion estimation, but a gap remained in the estimation of translational motion, in particular the estimation of the time to impact. To consistently estimate the time to impact during inter-saccadic translatory motion, the fundamental limitation of contrast dependence must be overcome. By adapting an elaborated rotational velocity estimator from literature to work for translational motion, this paper proposes a novel algorithm for overcoming the contrast dependence of time to impact estimation using nonlinear spatio-temporal feedforward filtering. By applying bioinspired processes, approximately 15 points per decade of statistical discrimination were achieved when estimating the time to impact to a target across 360 background, distance, and velocity combinations: a 17-fold increase over the fundamental process. These results show the contrast dependence of time to impact estimation can be overcome in a biologically plausible manner. This, combined with previous results for low-speed rotational motion estimation, allows for contrast invariant computational models designed on the principles found in the biological visual system, paving the way for future visually guided systems. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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- View/download PDF
34. Information filtering by coincidence detection of synchronous population output: analytical approaches to the coherence function of a two-stage neural system.
- Author
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Bostner, Žiga, Knoll, Gregory, and Lindner, Benjamin
- Subjects
RECOMMENDER systems ,COINCIDENCE circuits ,SPECTRAL theory ,HIGHPASS electric filters - Abstract
Information about time-dependent sensory stimuli is encoded in the activity of neural populations; distinct aspects of the stimulus are read out by different types of neurons: while overall information is perceived by integrator cells, so-called coincidence detector cells are driven mainly by the synchronous activity in the population that encodes predominantly high-frequency content of the input signal (high-pass information filtering). Previously, an analytically accessible statistic called the partial synchronous output was introduced as a proxy for the coincidence detector cell's output in order to approximate its information transmission. In the first part of the current paper, we compare the information filtering properties (specifically, the coherence function) of this proxy to those of a simple coincidence detector neuron. We show that the latter's coherence function can indeed be well-approximated by the partial synchronous output with a time scale and threshold criterion that are related approximately linearly to the membrane time constant and firing threshold of the coincidence detector cell. In the second part of the paper, we propose an alternative theory for the spectral measures (including the coherence) of the coincidence detector cell that combines linear-response theory for shot-noise driven integrate-and-fire neurons with a novel perturbation ansatz for the spectra of spike-trains driven by colored noise. We demonstrate how the variability of the synaptic weights for connections from the population to the coincidence detector can shape the information transmission of the entire two-stage system. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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35. From spatial navigation via visual construction to episodic memory and imagination.
- Author
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Arbib, Michael A.
- Abstract
This hybrid of review and personal essay argues that models of visual construction are essential to extend spatial navigation models to models that link episodic memory and imagination. The starting point is the TAM–WG model, combining the Taxon Affordance Model and the World Graph model of spatial navigation. The key here is to reject approaches in which memory is restricted to unanalyzed views from familiar places, and their later recall. Instead, we will seek mechanisms for imagining truly novel scenes and episodes. We thus introduce a specific variant of schema theory and VISIONS, a cooperative computation model of visual scene understanding in which a scene is represented by an assemblage of schema instances with links to lower-level "patches" of relevant visual data. We sketch a new conceptual framework for future modeling, Visual Integration of Diverse Multi-Modal Aspects, by extending VISIONS from static scenes to episodes combining agents, actions and objects and assess its relevance to both navigation and episodic memory. We can then analyze imagination as a constructive process that combines aspects of memories of prior episodes along with other schemas and adjusts them into a coherent whole which, through expectations associated with diverse episodes and schemas, may yield the linkage of episodes that constitutes a dream or a narrative. The result is IBSEN, a conceptual model of Imagination in Brain Systems for Episodes and Navigation. The essay closes by analyzing other papers in this Special Issue to assess to what extent their results relate to the research proposed here. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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36. Techniques for temporal detection of neural sensitivity to external stimulation
- Author
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Ramon Huerta, Francisco B. Rodriguez, UAM. Departamento de Ingeniería Informática, and Neurocomputación Biológica (ING EPS-005)
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Bayes test ,General Computer Science ,Bioinformatics ,Bayesian probability ,Models, Neurological ,Neural response ,Neural coding ,Grasshoppers ,Stimulus (physiology) ,Sensitivity ,Neurobiology ,Animals ,Mushroom Bodies ,Statistical hypothesis testing ,Informática ,Neurons ,Original Paper ,Sensory stimulation therapy ,business.industry ,Neurosciences ,Statistical testing ,Likelihood ratio test ,Pattern recognition ,Fisher test ,Complexity ,Olfactory Perception ,Olfaction ,Biomedicine ,Likelihood-ratio test ,Computer Appl. in Life Sciences ,Probability distribution ,Artificial intelligence ,business ,Psychology ,Feature learning ,Neuroscience ,psychological phenomena and processes ,Biotechnology ,Computer Science(all) - Abstract
The final publication is available at Springer via http://dx.doi.org/10.1007/s00422-009-0297-6, We propose a simple measure of neural sensitivity for characterizing stimulus coding. Sensitivity is defined as the fraction of neurons that show positive responses to n stimuli out of a total of N. To determine a positive response, we propose two methods: Fisherian statistical testing and a data-driven Bayesian approach to determine the response probability of a neuron. The latter is non-parametric, data-driven, and captures a lower bound for the probability of neural responses to sensory stimulation. Both methods are compared with a standard test that assumes normal probability distributions. We applied the sensitivity estimation based on the proposed method to experimental data recorded from the mushroom body (MB) of locusts. We show that there is a broad range of sensitivity that the MB response sweeps during odor stimulation. The neurons are initially tuned to specific odors, but tend to demonstrate a generalist behavior towards the end of the stimulus period, meaning that the emphasis shifts from discrimination to feature learning., This work was supported by the Spanish Government projects TIN 2007-65989 and Network CAM S-SEM-0255-2006.
- Published
- 2008
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37. Linear ensemble-coding in midbrain superior colliculus specifies the saccade kinematics
- Author
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A. J. Van Opstal and H.H.L.M. Goossens
- Subjects
Superior Colliculi ,Time Factors ,General Computer Science ,Models, Neurological ,Biophysics ,Action Potentials ,Kinematics ,Feedback ,03 medical and health sciences ,0302 clinical medicine ,Cognitive neurosciences [UMCN 3.2] ,Perception and Action [DCN 1] ,Reaction Time ,Saccades ,Animals ,Computer vision ,Attention ,Nonlinearity ,030304 developmental biology ,Neurons ,0303 health sciences ,Original Paper ,Quantitative Biology::Neurons and Cognition ,business.industry ,Superior colliculus ,Linear model ,Eye movement ,Main sequence ,Biomechanical Phenomena ,Monkey ,Nonlinear system ,Population coding ,Saccade ,Linear Models ,Spatial accuracy ,Artificial intelligence ,Brainstem ,Visual Fields ,business ,Psychology ,Neural coding ,Algorithm ,030217 neurology & neurosurgery ,Photic Stimulation ,Computer Science(all) ,Biotechnology - Abstract
Contains fulltext : 69496.pdf (author's version ) (Open Access) Contains fulltext : 69496.pdf (Publisher’s version ) (Closed access) Recently, we proposed an ensemble-coding scheme of the midbrain superior colliculus (SC) in which, during a saccade, each spike emitted by each recruited SC neuron contributes a fixed minivector to the gaze-control motor output. The size and direction of this 'spike vector' depend exclusively on a cell's location within the SC motor map (Goossens and Van Opstal, in J Neurophysiol 95: 2326-2341, 2006). According to this simple scheme, the planned saccade trajectory results from instantaneous linear summation of all spike vectors across the motor map. In our simulations with this model, the brainstem saccade generator was simplified by a linear feedback system, rendering the total model (which has only three free parameters) essentially linear. Interestingly, when this scheme was applied to actually recorded spike trains from 139 saccade-related SC neurons, measured during thousands of eye movements to single visual targets, straight saccades resulted with the correct velocity profiles and nonlinear kinematic relations ('main sequence properties' and 'component stretching'). Hence, we concluded that the kinematic nonlinearity of saccades resides in the spatial-temporal distribution of SC activity, rather than in the brainstem burst generator. The latter is generally assumed in models of the saccadic system. Here we analyze how this behaviour might emerge from this simple scheme. In addition, we will show new experimental evidence in support of the proposed mechanism.
- Published
- 2007
38. Codimension-2 parameter space structure of continuous-time recurrent neural networks.
- Author
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Beer, Randall D.
- Subjects
RECURRENT neural networks ,LARGE space structures (Astronautics) ,NEURAL circuitry ,COMPUTATIONAL neuroscience - Abstract
If we are ever to move beyond the study of isolated special cases in theoretical neuroscience, we need to develop more general theories of neural circuits over a given neural model. The present paper considers this challenge in the context of continuous-time recurrent neural networks (CTRNNs), a simple but dynamically universal model that has been widely utilized in both computational neuroscience and neural networks. Here, we extend previous work on the parameter space structure of codimension-1 local bifurcations in CTRNNs to include codimension-2 local bifurcation manifolds. Specifically, we derive the necessary conditions for all generic local codimension-2 bifurcations for general CTRNNs, specialize these conditions to circuits containing from one to four neurons, illustrate in full detail the application of these conditions to example circuits, derive closed-form expressions for these bifurcation manifolds where possible, and demonstrate how this analysis allows us to find and trace several global codimension-1 bifurcation manifolds that originate from the codimension-2 bifurcations. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
39. Autoencoders reloaded.
- Author
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Bourlard, Hervé and Kabil, Selen Hande
- Subjects
MULTILAYER perceptrons ,SINGULAR value decomposition ,ARTIFICIAL neural networks ,EIGENVALUES ,PRINCIPAL components analysis ,LINEAR algebra - Abstract
In Bourlard and Kamp (Biol Cybern 59(4):291–294, 1998), it was theoretically proven that autoencoders (AE) with single hidden layer (previously called "auto-associative multilayer perceptrons") were, in the best case, implementing singular value decomposition (SVD) Golub and Reinsch (Linear algebra, Singular value decomposition and least squares solutions, pp 134–151. Springer, 1971), equivalent to principal component analysis (PCA) Hotelling (Educ Psychol 24(6/7):417–441, 1993); Jolliffe (Principal component analysis, springer series in statistics, 2nd edn. Springer, New York). That is, AE are able to derive the eigenvalues that represent the amount of variance covered by each component even with the presence of the nonlinear function (sigmoid-like, or any other nonlinear functions) present on their hidden units. Today, with the renewed interest in "deep neural networks" (DNN), multiple types of (deep) AE are being investigated as an alternative to manifold learning Cayton (Univ California San Diego Tech Rep 12(1–17):1, 2005) for conducting nonlinear feature extraction or fusion, each with its own specific (expected) properties. Many of those AE are currently being developed as powerful, nonlinear encoder–decoder models, or used to generate reduced and discriminant feature sets that are more amenable to different modeling and classification tasks. In this paper, we start by recalling and further clarifying the main conclusions of Bourlard and Kamp (Biol Cybern 59(4):291–294, 1998), supporting them by extensive empirical evidences, which were not possible to be provided previously (in 1988), due to the dataset and processing limitations. Upon full understanding of the underlying mechanisms, we show that it remains hard (although feasible) to go beyond the state-of-the-art PCA/SVD techniques for auto-association. Finally, we present a brief overview on different autoencoder models that are mainly in use today and discuss their rationale, relations and application areas. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
40. Affine differential geometry analysis of human arm movements
- Author
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Amir Handzel and Tamar Flash
- Subjects
Original Paper ,Time Factors ,General Computer Science ,Geodesic ,Movement ,Affine differential geometry ,Motion Perception ,Motion (geometry) ,Curvature ,Proprioception ,Models, Biological ,Biomechanical Phenomena ,Differential geometry ,Moving frame ,Control theory ,Euclidean geometry ,Arm ,Humans ,Point (geometry) ,Algorithm ,Mathematics ,Psychomotor Performance ,Computer Science(all) ,Biotechnology - Abstract
Humans interact with their environment through sensory information and motor actions. These interactions may be understood via the underlying geometry of both perception and action. While the motor space is typically considered by default to be Euclidean, persistent behavioral observations point to a different underlying geometric structure. These observed regularities include the “two-thirds power law”, which connects path curvature with velocity, and “local isochrony”, which prescribes the relation between movement time and its extent. Starting with these empirical observations, we have developed a mathematical framework based on differential geometry, Lie group theory and Cartan’s moving frame method for the analysis of human hand trajectories. We also use this method to identify possible motion primitives, i.e., elementary building blocks from which more complicated movements are constructed. We show that a natural geometric description of continuous repetitive hand trajectories is not Euclidean but equi-affine. Specifically, equi-affine velocity is piecewise constant along movement segments, and movement execution time for a given segment is proportional to its equi-affine arc-length. Using this mathematical framework, we then analyze experimentally recorded drawing movements. To examine movement segmentation and classification, the two fundamental equi-affine differential invariants—equi-affine arc-length and curvature are calculated for the recorded movements. We also discuss the possible role of conic sections, i.e., curves with constant equi-affine curvature, as motor primitives and focus in more detail on parabolas, the equi-affine geodesics. Finally, we explore possible schemes for the internal neural coding of motor commands by showing that the equi-affine framework is compatible with the common model of population coding of the hand velocity vector when combined with a simple assumption on its dynamics. We then discuss several alternative explanations for the role that the equi-affine metric may play in internal representations of motion perception and production.
- Published
- 2006
41. Modeling the process of problem-solving by associative networks capable of improving the performance.
- Author
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Hirai, Y. and Ma, Q.
- Abstract
In this paper a model of neural network underlying arithmetic prblem-solving is described. Memory models of procedural memory, semantic memory, and working memory, which are necessary to represent the process of the problem-solving, are constructed within a framework of a model of associative processor, HASP, proposed by one of the authors (Hirai 1983). Performance of the model has been simulated on a digital computer. By memorizing primitive knowledge of addition of two digits such as 6+8=14 in the semantic memory and procedural knowledge for the control of the process of adding in the procedural memory, the model can perform addition of multiple numbers with multiple digits. By making explicit serial associations between consecutive procedural steps, the performance of the model can be impooved, because a current procedural step primes the next one. In addition, if a preceding procedural step is a subset of the next one, merging between the two steps occurs. The performance can be improved about 20% by these priming and merging. By memorizing incorrect procedures, the model can generate four kinds of bugs of addition which were observed in children's performance. [ABSTRACT FROM AUTHOR]
- Published
- 1988
- Full Text
- View/download PDF
42. A method of description of single muscle fibre action potential by an analytical function V(t, r).
- Author
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Piotrkiewicz, M. and Miller-Larsson, A.
- Abstract
The paper describes a new method of analytical description of single muscle fibre action potential suitable for computer simulation. The description introduced is a product of quadratic and gaussian functions. The coefficients of the function are determined on the basis of dependences of SFAP parameters on electrode-to-fibre distance combined from the transformed results of electrophysiological experiments and modelling. The description is being used for computer simulation of motor unit action potential which results will be described in forthcoming papers. [ABSTRACT FROM AUTHOR]
- Published
- 1987
- Full Text
- View/download PDF
43. Stochastic synchronization in nonlinear network systems driven by intrinsic and coupling noise.
- Author
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Aminzare, Zahra and Srivastava, Vaibhav
- Subjects
NONLINEAR systems ,SYNCHRONIZATION ,NOISE - Abstract
In this paper, we consider a noisy network of nonlinear systems in the sense that each system is driven by two sources of state-dependent noise: (1) an intrinsic noise that can be generated by the environment or any internal fluctuations and (2) a noisy coupling which is generated by interactions with other systems. Our goal is to understand the effect of noise and coupling on synchronization behaviors of such networks. First, we assume that all the systems are driven by a common noise and show how a common noise can be detrimental or beneficial for network synchronization behavior. Then, we assume that the systems are driven by independent noise and study network approximate synchronization behavior. We numerically illustrate our results using the example of coupled Van der Pol oscillators. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
44. Mean-return-time phase of a stochastic oscillator provides an approximate renewal description for the associated point process.
- Author
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Holzhausen, Konstantin, Ramlow, Lukas, Pu, Shusen, Thomas, Peter J., and Lindner, Benjamin
- Subjects
POINT processes ,MEMBRANE potential ,RANDOM noise theory ,WHITE noise ,THRESHOLD voltage ,COMPUTATIONAL neuroscience - Abstract
Stochastic oscillations can be characterized by a corresponding point process; this is a common practice in computational neuroscience, where oscillations of the membrane voltage under the influence of noise are often analyzed in terms of the interspike interval statistics, specifically the distribution and correlation of intervals between subsequent threshold-crossing times. More generally, crossing times and the corresponding interval sequences can be introduced for different kinds of stochastic oscillators that have been used to model variability of rhythmic activity in biological systems. In this paper we show that if we use the so-called mean-return-time (MRT) phase isochrons (introduced by Schwabedal and Pikovsky) to count the cycles of a stochastic oscillator with Markovian dynamics, the interphase interval sequence does not show any linear correlations, i.e., the corresponding sequence of passage times forms approximately a renewal point process. We first outline the general mathematical argument for this finding and illustrate it numerically for three models of increasing complexity: (i) the isotropic Guckenheimer–Schwabedal–Pikovsky oscillator that displays positive interspike interval (ISI) correlations if rotations are counted by passing the spoke of a wheel; (ii) the adaptive leaky integrate-and-fire model with white Gaussian noise that shows negative interspike interval correlations when spikes are counted in the usual way by the passage of a voltage threshold; (iii) a Hodgkin–Huxley model with channel noise (in the diffusion approximation represented by Gaussian noise) that exhibits weak but statistically significant interspike interval correlations, again for spikes counted when passing a voltage threshold. For all these models, linear correlations between intervals vanish when we count rotations by the passage of an MRT isochron. We finally discuss that the removal of interval correlations does not change the long-term variability and its effect on information transmission, especially in the neural context. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
45. On motion camouflage as proportional navigation.
- Author
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Rañó, Iñaki
- Subjects
PROPORTIONAL navigation ,REINFORCEMENT learning ,ANIMAL behavior ,SPORTS records ,MOTION control devices ,SPORTS events - Abstract
Motion camouflage is a stealth behaviour by which an insect can appear stationary at a fixed point while approaching or escaping another moving insect. Although several approaches have been proposed to generate motion camouflage in simulated and real agents, the exact mechanisms insects use to perform this complex behaviour are not well understood, especially considering their limited perceptual and computational resources. This paper sheds light on the possible underlying control mechanisms insect might use to generate motion camouflage, by training and analysing a series of motion camouflage controllers using reinforcement learning. We first investigate through simulations the most relevant information available to the insect that can be used to perform motion camouflage and analyse the learnt controllers. The results of this analysis drove us to hypothesise two simpler control mechanisms which, we show, can also generate motion camouflage. The proposed controllers are an extension of proportional navigation, another interception technique found in nature, and therefore, both animal behaviours seem to be connected. Motion camouflage can lead, among others, to novel approaches to closely observe animals in the wild, record sports events or gather information in military operations without being noticed. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
46. Auxiliary controller design and performance comparative analysis in closed-loop brain–machine interface system.
- Author
-
Pan, Hongguang, Song, Haoqian, Zhang, Qi, Mi, Wenyu, and Sun, Jinggao
- Subjects
CLOSED loop systems ,COMPARATIVE studies ,DYNAMICAL systems ,DESIGN ,PREDICTION models ,BRAIN-computer interfaces - Abstract
Brain–machine interface (BMI) can realize information interaction between the brain and external devices, and yet the control accuracy is limited by the change of electroencephalogram signals. The introduction of auxiliary controller can overcome the above problems, but the performance of different auxiliary controllers is quite different. Hence, in this paper, we comprehensively compare and analyze the performance of different auxiliary controllers to provide a theoretical basis for designing BMI system. The main work includes: (1) designing four kinds of auxiliary controllers based on simultaneous perturbation stochastic approximation-function approximator (SPSA-FA), iterative feedback tuning-PID (IFT-PID), model predictive control (MPC) and model-free control (MFC); (2) based on the model of improved single-joint information transmission, constructing the closed-loop BMI systems with the decoder-based Wiener filter; and (3) comparing their performance in the constructed closed-loop BMI systems for dynamic motion restoration. The results show that the order of tracking accuracy is MPC, IFT-PID, SPSA-FA, MFC, and the order of time consumed is opposite. A good control effectiveness is achieved at the expense of time, so a suitable auxiliary controller should be selected according to the actual requirements. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
47. Special issue on quantitative neuron modeling.
- Author
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Jolivet, Renaud, Roth, Arnd, Schürmann, Felix, Gerstner, Wulfram, and Senn, Walter
- Subjects
NEURONS ,PHYSIOLOGICAL control systems - Abstract
The article discusses various reports published within the issue, including one by Van Geit and colleagues on the current techniques for automated optimization of neuron models and another by Druckmann and colleagues on the importance of using the correct error function to evaluate and optimize single neuron models.
- Published
- 2008
- Full Text
- View/download PDF
48. Archerfish respond to a hunting robotic conspecific.
- Author
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Brown, Alexander A., Brown, Michael F., Folk, Spencer R., and Utter, Brent A.
- Subjects
HUNTING ,ROBOTICS ,SOCIETAL reaction ,KNOWLEDGE transfer ,PETRI nets ,ROBOTS - Abstract
While the unique hunting behavior of archerfish has received considerable scientific attention, the specific social cues that govern behaviors like intraspecific kleptoparasitism in the species are less understood. This paper asks whether the use of a robotic facsimile representing an archerfish can elicit a social response if it approximates an archerfish's appearance, along with key features of its hunting behavior. We found that the fish respond to the robot when it hunted, as indicated by decreasing distances between the robot and fish (and among the fish) during the robot's hunting behavior sequence, as well as higher net transfer entropy when the robot was hunting. These effects were present even when the robot's "hunt" was unproductive and did not result in food. The temporal pattern of fish approach to the robot and each other indicated that the segment of robot hunting behavior proximal to the robotic facsimile shot elicited fish behavior initially. However, earlier cues in the robot's hunting sequence became important following more experience with a food contingency. This indicates that further studies could use a robotic facsimile to conduct a detailed stimulus analysis, changing aspects of the robot's appearance and behavior to uncover the basic mechanisms of information transfer among individuals in a social hunting scenario. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
49. Planning and navigation as active inference.
- Author
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Kaplan, Raphael and Friston, Karl J.
- Subjects
BRAIN imaging ,ELECTROPHYSIOLOGY ,NAVIGATION ,PROBLEM solving ,SIMULATION methods & models - Abstract
This paper introduces an active inference formulation of planning and navigation. It illustrates how the exploitation-exploration dilemma is dissolved by acting to minimise uncertainty (i.e. expected surprise or free energy). We use simulations of a maze problem to illustrate how agents can solve quite complicated problems using context sensitive prior preferences to form subgoals. Our focus is on how epistemic behaviour—driven by novelty and the imperative to reduce uncertainty about the world—contextualises pragmatic or goal-directed behaviour. Using simulations, we illustrate the underlying process theory with synthetic behavioural and electrophysiological responses during exploration of a maze and subsequent navigation to a target location. An interesting phenomenon that emerged from the simulations was a putative distinction between ‘place cells’—that fire when a subgoal is reached—and ‘path cells’—that fire until a subgoal is reached. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
50. From internal models toward metacognitive AI.
- Author
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Kawato, Mitsuo and Cortese, Aurelio
- Subjects
REWARD (Psychology) ,COGNITIVE ability ,ARTIFICIAL intelligence ,REINFORCEMENT learning ,COMPUTATIONAL neuroscience ,CONSCIOUSNESS - Abstract
In several papers published in Biological Cybernetics in the 1980s and 1990s, Kawato and colleagues proposed computational models explaining how internal models are acquired in the cerebellum. These models were later supported by neurophysiological experiments using monkeys and neuroimaging experiments involving humans. These early studies influenced neuroscience from basic, sensory-motor control to higher cognitive functions. One of the most perplexing enigmas related to internal models is to understand the neural mechanisms that enable animals to learn large-dimensional problems with so few trials. Consciousness and metacognition—the ability to monitor one's own thoughts, may be part of the solution to this enigma. Based on literature reviews of the past 20 years, here we propose a computational neuroscience model of metacognition. The model comprises a modular hierarchical reinforcement-learning architecture of parallel and layered, generative-inverse model pairs. In the prefrontal cortex, a distributed executive network called the "cognitive reality monitoring network" (CRMN) orchestrates conscious involvement of generative-inverse model pairs in perception and action. Based on mismatches between computations by generative and inverse models, as well as reward prediction errors, CRMN computes a "responsibility signal" that gates selection and learning of pairs in perception, action, and reinforcement learning. A high responsibility signal is given to the pairs that best capture the external world, that are competent in movements (small mismatch), and that are capable of reinforcement learning (small reward-prediction error). CRMN selects pairs with higher responsibility signals as objects of metacognition, and consciousness is determined by the entropy of responsibility signals across all pairs. This model could lead to new-generation AI, which exhibits metacognition, consciousness, dimension reduction, selection of modules and corresponding representations, and learning from small samples. It may also lead to the development of a new scientific paradigm that enables the causal study of consciousness by combining CRMN and decoded neurofeedback. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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