4 results on '"Palaniappan Alagappan"'
Search Results
2. Flow-through colorimetric assay for detection of nucleic acids in plasma
- Author
-
Gopal Ammanath, Jamal Ahmed Cheema, Mukti Vats, Bo Liedberg, Palaniappan Alagappan, Rohit Srivastava, Umit Hakan Yildiz, Sanjida Yeasmin, Fairuz Nabilah, Yuvasri Srinivasulu, School of Materials Science and Engineering, Interdisciplinary Graduate School (IGS), and Centre for Biomimetic Sensor Science
- Subjects
Hepatitis B virus ,Point-of-Care Systems ,Peptide ,02 engineering and technology ,Hepatitis B virus DNA ,01 natural sciences ,Biochemistry ,Analytical Chemistry ,chemistry.chemical_compound ,Humans ,Environmental Chemistry ,Spectroscopy ,chemistry.chemical_classification ,Detection limit ,Chromatography ,Materials [Engineering] ,Chemistry ,010401 analytical chemistry ,Cationic polymerization ,Plasma ,021001 nanoscience & nanotechnology ,Polythiophene ,0104 chemical sciences ,MicroRNAs ,Membrane ,DNA, Viral ,Nucleic acid ,Colorimetry ,0210 nano-technology ,Colorimetric Array - Abstract
A flow-through colorimetric assay for detection of nucleic acids in plasma is reported. The proposed assay features an array of four polyvinylidene fluoride (PVDF) membranes impregnated with cationic poly (3-alkoxy-4-methylthiophene) (PT) as an optical reporter. The sensing strategy is based on monitoring the changes in optical properties of PT, upon complexation with target nucleic acids in the presence and in the absence of their corresponding complementary peptide nucleic acids (PNAs). As a proof of concept, the proposed methodology is validated using two biomarkers; lung cancer associated microRNA (mir21) and hepatitis B virus DNA (HBV-DNA). The flow-through colorimetric assay enabled detection of mir21 and HBV-DNA in plasma without requiring tedious sample pre-treatment and clean up protocols. Colorimetric responses for mir21 and HBV-DNA were obtained at nanomolar concentrations over five orders of magnitudes (from 1 nM to 10 μM), with a limit of detection of ∼0.6 nM and ∼2 nM in DI water and plasma, respectively. A logic gate system was developed to utilize the colorimetric assay responses as inputs for discrimination of mir21 and HBV-DNA and subsequently to obtain a profile of nucleic acids in samples that exceed respective clinical threshold limits, thereby enabling rapid and point of care (POC) disease diagnosis. Furthermore, the proposed methodology can be utilized for detection of a large number of nucleic acids in plasma by extending the array of PT impregnated membranes incorporated with their corresponding complementary PNAs. Accepted version
- Published
- 2019
- Full Text
- View/download PDF
3. Visual detection of Al3+ ions using conjugated copolymer-ATP supramolecular complex
- Author
-
Bo Liedberg, Palaniappan Alagappan, Meng-Che Tu, Deepa Rajwar, Umit Hakan Yildiz, Gopal Ammanath, Tr147447, Yıldız, Ümit Hakan, and Izmir Institute of Technology. Chemistry
- Subjects
Polymers ,Inorganic chemistry ,02 engineering and technology ,Conjugated polymers ,Conjugated system ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Fluorescence ,Analytical Chemistry ,chemistry.chemical_compound ,Adenosine Triphosphate ,Tap water ,Cations ,Copolymer ,Environmental Chemistry ,Organic chemistry ,Colorimetry ,Spectroscopy ,Naked eye detection ,Aluminum ion sensors ,integumentary system ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Monomer ,chemistry ,Polythiophene ,Naked eye ,Supramolecular chemistry ,0210 nano-technology ,Aluminum - Abstract
A colorimetric Al3+ sensor based on fluorescence recovery of a conjugated copolymer-ATP complex is proposed. An optimized ratio of two polythiophene (PT) monomers is utilized to synthesize copolymer (CP) that yielded maximized colorimetric response for Al3+ in deionized (DI) and tap water. The electrostatic disassembly of CP-ATP upon addition of Al3+ led to an evident visual color change. The lowest concentration of Al3+ for naked eye observation is around 4 μM, which is below the threshold levels in drinking water according to European Economic Community (EEC) standard. Besides, the proposed assay showed a similar response to Al3+ in tap water. The proposed methodology showed selective and sensitive detection for Al3+ in analytically relevant concentration ranges without involving sophisticated instrumentation, illustrating the applicability for on-site drinking water monitoring., MOE (RG 82/12); Provost Office Nanyang Technological University, Singapore
- Published
- 2016
- Full Text
- View/download PDF
4. Immunosensor based on carbon nanotube/manganese dioxide electrochemical tags
- Author
-
Shabbir Moochhala, Bo Liedberg, Meng-Che Tu, Yuxi Wang, Palaniappan Alagappan, and Han-Yi Chen
- Subjects
Composite number ,Glassy carbon electrode ,Analytical chemistry ,chemistry.chemical_element ,Biosensing Techniques ,Manganese ,Carbon nanotube ,Electrochemistry ,Biochemistry ,Antibodies ,Analytical Chemistry ,law.invention ,chemistry.chemical_compound ,law ,Humans ,Environmental Chemistry ,Hydrogen peroxide ,Electrodes ,Spectroscopy ,Detection limit ,Chitosan ,Nanotubes, Carbon ,Oxides ,Electrochemical Techniques ,Hydrogen Peroxide ,Manganese Compounds ,chemistry ,alpha-Fetoproteins ,Oxidation-Reduction ,Biosensor ,Nuclear chemistry - Abstract
This article reports on carbon nanotube/manganese dioxide (CNT-MnO2) composites as electrochemical tags for non-enzymatic signal amplification in immunosensing. The synthesized CNT-MnO2 composites showed good electrochemical activity, electrical conductivity and stability. The electrochemical signal of CNT-MnO2 composites coated glassy carbon electrode (GCE) increased by nearly two orders of magnitude compared to bare GCE in hydrogen peroxide (H2O2) environment. CNT-MnO2 composite was subsequently validated as electrochemical tags for sensitive detection of α-fetoprotein (AFP), a tumor marker for diagnosing hepatocellular carcinoma. The electrochemical immunosensor demonstrated a linear response on a log-scale for AFP concentrations ranging from 0.2 to 100 ng mL(-1). The limit of detection (LOD) was estimated to be 40 pg mL(-1) (S/N=3) in PBS buffer. Further measurements using AFP spiked plasma samples revealed the applicability of fabricated CNT-MnO2 composites for clinical and diagnostic applications.
- Published
- 2015
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.