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Spectral intensity drift is a frequent issue in analytical processes, especially in long time excitation scanning for large size metal materials, which can significantly adversely impact the accuracy and stability of analysis results. Spectral intensity drift correction is the process of preprocessing spectral data using mathematical algorithms in order to facilitate the subsequent qualitative and quantitative analysis of spectra, especially in combination with stoichiometric methods. Up to now, spectral intensity drift correction within prolonged excitation has not been reported yet. We propose an intensity drift correction method for element content of large-size samples using the Spark Mapping Analysis for Large Samples (SMALS) technique. By considering the row-by-row and column-by-column mapping modes of the SMALS, this includes curve fitting baseline correction for in-row and in-column correction, as well as total average value correction for inter-row and inter-column correction. The final measurement values are derived by coupling rows with columns. The careful implementation of correction steps can enhance baseline correction performance, effectively reducing measurement errors a drift errors. Application of this method to characterize the cross and longitudinal sections of an oversized steel billet indicates high agreement with composition distribution obtained by micro-beam X-ray fluorescence (μ-XRF). The corrected longitudinal and cross-sectional data also exhibit strong alignment. Comparison of statistical analysis results pre- and post-correction demonstrates significant improvements in the clarity of elements segregation pattern. This intensity drift correction method not only enhances the spectral quality but also improves the accuracy and robustness of quantitative and qualitative spectral analysis. This study contributes to establishing a robust foundation for component characterization of large-size metal materials using the SMALS technique. The novel spectral intensity correction method shows theoretical significance and practical value for large-scale, long-duration excitation scanning analysis. [Display omitted] • The measurement error was eliminated by in-row/in-column, inter-row/inter-column correction and complementary coupling. • The intensity drift correction method significantly improves the accuracy and stability of analysis results of the SMALS. • This work laid a firm foundation of component characterization for large-size metal material using the SMALS. [ABSTRACT FROM AUTHOR]

The utilization of near-infrared (NIR) spectroscopy, in conjunction with chemometric techniques, has been widely used in a variety of sectors, including agricultural production and pharmaceutical production. Nevertheless, the laborious and arduous procedure of gathering samples and evaluating their physicochemical properties leads to relatively limited training set sizes for modeling. This problem severely limits the optimization and practical application of NIR spectrum analysis models. The Safer Active Semi-Supervised Sample Augmentation Learning Model (Safer-AS3A) proposed in this paper tries to address the problem by incorporating active learning (AL) and semi-supervised learning (SSL) techniques. Experiments were conducted on two sets of publicly available NIR spectral datasets, and the Safer-AS3A model was compared to other models with similar characteristics. The experimental results indicate that the Safer-AS3A model proposed in our study outperforms comparable models in terms of accuracy and robustness when dealing with scenarios having a limited number of labeled samples. Furthermore, after the training set was expanded with the Safer-AS3A model, the Partial least squares regression (PLSR), Bayesian ridge regression (BRR), and Support vector regression (SVR) models on the Diesel dataset improved their R 2 on the test set by 5.923 %, 3.018 %, and 7.331 %, respectively, compared to the models using only the labeled sample set. On the other hand, the Ridge regression (RR), BRR, and SVR models on the test set on the Shoot dataset improved the R 2 by 4.169 %, 4.449 %, and 11.597 %, respectively. Overall, the Safer-AS3A model can effectively expand the NIR spectral dataset and considerably improve the performance of the NIR spectral analysis model. Using the AL method, the SSL method, and the co-training method together, a novel and effective method is presented for generating high-quality pseudo-labels. This method opens up new avenues for enhancing the efficiency and precision of NIR spectrum analysis. It also provides novel perspectives on sample diversification and prospective applications in other disciplines. [Display omitted] • A deep active learning method is developed to analyze near-infrared spectroscopy data. • The stability principle and voting mechanism are added to the confidence evaluation of pseudo-labeling. • The co-training method effectively alleviates the problem of insufficient labeled spectral samples. [ABSTRACT FROM AUTHOR]

Background: Hand, foot, and mouth (HMFD) disease caused by enterovirus 71 (EV 71), is closely associated with severe clinical manifestations and can be deadly. Early detection of EV 71 can be achieved by detecting the increment in miR296 and miR16 in the serum. Using HCR to amplify signals and convert biological signals into metal nanoparticle signals detectable by ICP-MS is a detection method that can collect more accurate and reliable information, compared with traditional methods, in the detection of biological samples., Results: We described a strategy for the simultaneous detection of miR296 and miR16 by ICP-MS based on metal nanoparticles (NPs) labeling with HCR. Briefly, single-stranded DNA (ssDNA) and magnetic beads (MBs), as well as NPs and signal probes for miRNA (Sp -miR ) were firstly conjugated via the streptavidin-biotin recognition system, constituting ssDNA-MBs and NPs-Sp -miR complex, respectively. The latter complex then hybridized with the former through HCR, generating the nanosensors for targets. Then, the targets were added and hybridized with ssDNA, and the HCR complex with NPs was released into the solution. Finally, the corresponding signals of the NPs were measured by ICP-MS. Results demonstrated that the developed method had good sensitivity and satisfactory selectivity and precision. Furthermore, when applied to biological samples with a complex matrix, the developed method also showed good recovery (88 % - 92 %) and reproducibility (RSD<10 %)., Significance: This method contributes to the early diagnosis of HFMD and opens up ideas for the further development of high-throughput biomarker detection. The strategy has practical potential for miR296 and miR16 detection in biological samples and provides a promising tool for multiple miRNA detection., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)

Background: Recent papers on LA-ICP-MS have reported that certain elements are transported in particulate form, others in gaseous form and still others in a combination of both upon ablation of C-based materials. These two phases display different transport behaviour characteristics, potentially causing smearing in elemental maps, and could be processed differently in the ICP which raises concerns as to accuracy of quantification and emphasizes the need for matrix-matching of external standards. This work aims at a better understanding of two-phase sample transport by evaluating the peak profile changes observed upon varying parameters such as laser energy density and wavelength., Results: It is demonstrated that upon ablation of gelatin, elements are transported predominantly in particulate phase, but already at low laser energy density, a significant fraction of some elements is transported in the gaseous phase, which is even more expressed at higher energy density. This behaviour is element-specific since the ratio of the signal intensity for the analyte element transported in gas phase to the total signal intensity was 0 % for 23 Na, 43 % for 66 Zn and as high as 95 % for 13 C using a 193 nm laser. The results also suggest an effect of the laser wavelength, as all elements show either the same or higher amount of gas phase formation upon ablating with 213 nm versus 193 nm. It was even established that elements that fully occur in particulate form upon ablation using 193 nm laser radiation are partly converted into gaseous phase when using 213 nm., Significance: This work provides a thorough investigation of the underexposed phenomenon of two-phase sample transport upon ablation of biological samples upon via LA-ICP-MS. It is shown that for some elements a fraction of the ablated material is converted and transported in the gas phase, which can lead to significant smearing effects. As such, it is important to evaluate element-specific peak profiles on beforehand and, if necessary, adapt instrument settings and slow down data acquisition., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Frank Vanhaecke has patent #EP3195346B1 licensed to Teledyne Photon Machines., (Copyright © 2023 Elsevier B.V. All rights reserved.)

Background: Miniaturized microplasma-based atomic emission spectrometry (AES) has been extensively used for element analysis in recent years due to the advantages of low power consumption, low gas consumption, relatively low manufacturing and running cost, and the potential for real-time and field analysis. However, few applications in bioassay detection have been reported based on microplasma AES systems because of their relatively low sensitivity and the absence of indirect analytical strategies. It is still a challenge to develop a simple, sensitive, and portable microplasma-based AES bioassay approach., Results: In this work, a portable analytical system was designed based on point discharge chemical vapor generation atomic emission spectrometry (PD-CVG-AES) coupling with gold filament enrichment. The detection of ascorbic acid (AA) was realized indirectly by means of the highly sensitive analysis of Hg 2+ . The measurement was based on Ag  +  can decrease the concentration of Hg 2+ by forming Ag-Hg amalgam in the presence of the reductant SnCl 2 , while AA can pre-reduce Ag  +  to Ag 0 , leading to the generation of silver nanoparticles (Ag NPs). The pre-reduce procedure can decrease the generation of Ag-Hg amalgam, resulting in the recovery of Hg 2+ signal. The dissociative Hg 2+ was further detected by PD-CVG-AES combination of gold filament enrichment, which significantly improved the detection sensitivity for both Hg 2+ and AA. Under optimal conditions, the limit of detection (LOD) of AA is as low as 19 nM with a relative standard deviation (RSD, n = 5) of 0.7 %., Significance: The developed novel analytical strategy obviously broadens the application of microplasma-based AES, and it is well demonstrated by the determination of AA in several traditional Chinese medicines (TCMs), offering a higher level of sensitivity compared to current AA detection techniques. It has potential for future application in point-of-care testing (POCT) assays., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)

Near infrared spectroscopy (NIRS) is an analytical technique for determining the chemical composition or structure of a given sample. For several decades, NIRS has been a frequently used analysis tool in agriculture, pharmacology, medicine, and petrochemistry. The popularity of NIRS is constantly growing as new application areas are discovered. Contrary to mid infrared spectral region, the absorption bands in near infrared spectral region are often non-specific, broad, and overlapping. Analysis of NIR spectra requires multivariate methods which are highly subjective to noise arising from instrumentation, scattering effects, and measurement setup. NIRS measurements are also frequently performed outside of a laboratory which further contributes to the presence of noise. Therefore, preprocessing is a critical step in NIRS as it can vastly improve the performance of multivariate models. While extensive research regarding various preprocessing methods exists, selection of the best preprocessing method is often determined through trial-and-error. A more powerful approach for optimizing preprocessing in NIRS models would be to automatically compare a large number of preprocessing techniques (e.g., through grid-search or hyperparameter tuning). To enable this, we present, nippy, an open-source Python module for semi-automatic comparison of NIRS preprocessing methods (available at https://github.com/uef-bbc/nippy). We provide here a brief overview of the capabilities of nippy and demonstrate the typical usage through two examples with public datasets. Image 1 • Spectral preprocessing affects the performance of chemometric models. • Selection of best preprocessing strategy depends heavily on the intended application. • nippy module can rapidly explore different preprocessing combinations. • Semi-automatic preprocessing tuning for spectroscopic models. [ABSTRACT FROM AUTHOR]

We demonstrate a recognition and feature visualization method that uses a deep convolutional neural network for Raman spectrum analysis. The visualization is achieved by calculating important regions in the spectra from weights in pooling and fully-connected layers. The method is first examined for simple Lorentzian spectra, then applied to the spectra of pharmaceutical compounds and numerically mixed amino acids. We investigate the effects of the size and number of convolution filters on the extracted regions for Raman-peak signals using the Lorentzian spectra. It is confirmed that the Raman peak contributes to the recognition by visualizing the extracted features. A near-zero weight value is obtained at the background level region, which appears to be used for baseline correction. Common component extraction is confirmed by an evaluation of numerically mixed amino acid spectra. High weight values at the common peaks and negative values at the distinctive peaks appear, even though the model is given one-hot vectors as the training labels (without a mix ratio). This proposed method is potentially suitable for applications such as the validation of trained models, ensuring the reliability of common component extraction from compound samples for spectral analysis. Image 1 • A recognition and trained feature visualization that uses a CNN are demonstrated. • Raman peak extraction and near-zero feature value at background region are obtained. • Common component and extraordinary peak extraction from mixed spectra are confirmed. [ABSTRACT FROM AUTHOR]

The determination accuracy of alloying elements in high alloy steel is generally poor in laser-induced breakdown spectroscopy (LIBS) due to their matrix effect. To solve this problem, an image quantitative analysis (IQA) method was proposed and verified by determining nickel (Ni) in 17 stainless steel samples in this work. The results showed that the coefficient of determination (R2) was increased from 0.9833 of a conventional spectrum quantitative analysis (SQA) method to 0.9996 of the IQA method, and the average relative error of cross-validation (ARECV) and root mean squared error of cross-validation (RMSECV) were decreased from 56.80% and 1.0818 wt% to 15.93% and 0.9866 wt%, respectively. Besides, the determinations of chromium (Cr) and silicon (Si) demonstrated the generalization ability of the IQA. This study provides an effective approach to improving the quantitative performance of LIBS through the combination of image processing and computer vision technology. Image 1 • A new quantitative analysis method named IQA is first proposed in LIBS. • Extracting spectral features indirectly by image features from LIBS image. • The quantitative analysis performance of image features is proved. • Significantly reduce the influence of matrix effects in the quantitative analysis of stainless steels. [ABSTRACT FROM AUTHOR]

In a qualitative analysis of near-infrared spectroscopy (NIRS), when the samples to be analyzed are difficult to obtain or there are few counterexamples, the robustness of the models is poor, resulting in the decline of the generalization ability of the models. In this case, the effective method is to construct virtual samples to achieve the balance of categories. In this contribution, three virtual spectrum construction strategies including Synthetic Minority Oversampling Technique (SMOTE), Adaptive Synthetic Sampling (ADASYN), and Deep Convolutional Generative Adversarial Network (DCGAN) were explored to deal with the problem of insufficient or imbalanced sample numbers in NIRS analysis. The strategies were tested with the melamine and Yali pears two spectral datasets. The PLS-DA and Correct Recognition Rate (CRR) were used for discriminant model construction and accuracy evaluation, respectively. The results show that SMOTE, ADASYN, and DCGAN processing strategies can all improve the global CRR (CRR glob). The SMOTE and ADASYN can improve the CRR for majority class sample (CRR maj), but the CRR for minority class sample (CRR min) has decreased. For the DCGAN method, the CRR glob , CRR maj , and CRR min were all improved. The standard deviation of the results of the multiple parallel calculations demonstrates the robustness of DCGAN generation method. Therefore, the DCGAN method has good reliability and practicability, and can increase the robustness and generalization ability of the NIRS model. [Display omitted] • Exploring virtual spectrum construction strategies. • Evaluate the plausibility and diversity of the virtual spectrum. • Improve the robustness and generalization ability of the NIRS model. • Test model performance on public datasets and experimental data. [ABSTRACT FROM AUTHOR]

Background: Silver nanoparticles (Ag NPs) are extensively used in various applications, but their reactivity leads to oxidative dissolution into Ag(I). When dealing with real samples involving Ag NPs, it is inevitable to encounter situations where both Ag NPs and Ag(I) coexist. Single particle-inductively coupled plasma mass spectrometry (SP-ICP-MS) is a valuable technique for nanoparticle size characterization. However, the presence of coexisting dissolved ions strongly interferes with the accuracy of particle size analysis using SP-ICP-MS. Therefore, it is crucial to develop a reliable separation analysis method to accurately measure both Ag NPs and Ag(I)., Results: In this study, we synthesized a silver ion-imprinted magnetic adsorbent with high adsorption capacity (149 mg g -1 ) and rapid adsorption kinetics (30 min) at both μg L -1 and mg L -1 concentration. The adsorbent selectively adsorbs Ag(I) at pH 7 while hardly adsorbing Ag NPs. It is reusable for more than 5 cycles after regeneration. Using this magnetic adsorbent prior to SP-ICP-MS, we accurately determined the sizes of standard Ag NPs in agreement with the size determined by transmission electron microscopy. The detection limit of particle size and number concentrations of Ag NPs was 12.6 nm and 6.3 × 10 5 particles L -1 . Moreover, we successfully applied the developed method to analyze Ag(I) and Ag NPs in antibacterial gel extracts and validated its accuracy through acid digestion-ICP-MS, TEM, and spiking experiments., Significance and Novelty: Direct SP-ICP-MS analysis in the presence of Ag(I) led to a high baseline, obscuring signals from smaller Ag NPs. Our method of selectively removing Ag(I) substantially improves the accuracy of Ag NPs detection via SP-ICP-MS in the antibacterial gel extracts (e.g. from 48.26 to 35.67 nm). Compared to other approaches used in SP-ICP-MS, our method has a higher adsorption capacity, allowing for better tolerance of coexisting Ag(I)., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)

Abstract Protein-surfactant interactions have been explored for decades owing to their widespread application in the pharmaceutical, food, and cosmetics industries and their importance to biochemical systems. However, they require further study owing to their compositional complexity and the innate limitations of current analytical approaches. In this review, we briefly introduce a series of individual approaches used for the qualitative and quantitative investigation of protein-surfactant interactions, including absorbance- or emission-based spectroscopy, scattering-based spectroscopy, mass spectrometry, calorimetry, computation and microscopy. More importantly, we then compare and evaluate various combinations of these approaches and provide comprehensive critical assessments and comments regarding their application to the advanced study of protein-surfactant interactions at the molecular level. Graphical abstract Image 1 Highlights • Investigation of protein-surfactant interactions are important in chemistry. • Individual analytical approaches have limitations. • Overview of individual analytical approaches: cons and pros. • Combinations of current individual approaches to overcome their limitations. • Assessment of the efficiency and validity of combinations of analytical approaches. [ABSTRACT FROM AUTHOR]

Abstract The prospect of developing new bio-based products from lignin partially depends on the development of effective analytical techniques to characterize the end products from lignin degradation experiments. To date, the most utilized mass spectrometric technique for characterizing lignin oligomers has been negative ion mass spectrometry. Positive ion mass spectrometry remains a relatively unexplored approach for lignin sequencing. Here we report on the sequencing of lignin oligomers using lithium cationization positive ion electrospray followed by higher-energy collisional dissociation (HCD) tandem mass spectrometry on a high-resolution accurate-mass Orbitrap mass spectrometer. Thirteen synthetic lignin model oligomers containing β-O-4 and 4-O-α linkages were analyzed and sequenced based on their HCD tandem mass spectrometry fragmentation patterns. Proposed sequence-specific fragmentation pathways are provided. The method presented in this study provides a potential application of lithium cationization tandem mass spectrometry for the analysis of lignin degradation products. Graphical abstract Image 1 Highlights • Lithium forms stable adducts with lignin oligomers generating cations for positive ion mass spectrometry. • Tandem mass spectrometry of lithium-lignin precursors produces lithiated fragment ions. • The monolignol sequence of an oligomer can be determined from the tandem mass spectrum. • Lithium cationization provides an alternative means of lignin oligomer ionization that retains sequencing features. [ABSTRACT FROM AUTHOR]

Abstract In this review, an assessment of non-separative methods based on mass spectrometry used to analyse volatile organic compounds in the field of bioanalysis is performed. The use of non-separative methods based on mass spectrometry has been established as an attractive option for analysing compounds. These instrumental configurations are suitable for biomedical applications because of their versatility, rapid output of results, and the wide range of volatile organic compounds that can be determined. Here, techniques such as headspace sampling coupled to mass spectrometry, membrane introduction mass spectrometry, selected ion flow tube mass spectrometry, proton transfer reaction mass spectrometry, secondary electrospray ionization mass spectrometry and ion mobility mass spectrometry, are evaluated. Samples involving non-invasive methods of collection, such as urine, saliva, breath and sweat, are mainly considered. To the best of our knowledge, a comprehensive review of all the non-separative instrumental configurations applied to the analysis of gaseous samples from all matrices non-invasively collected has not yet been carried out. The assessment of non-separative techniques for the analysis of these type of samples can be considered a key issue for future clinical applications, as they allow real-time sample analysis, without patient suffering. Any contribution to the early diagnosis of disease can be considered a priority for the scientific community. Therefore, the identification and determination of volatile organic compounds related to particular diseases has become an important field or research. Graphical abstract Image 1 Highlights • Advantages and disadvantages of using different non-separative methods in bioanalysis are presented. • Potential of VOCs determination using methods based on mass spectrometry are discussed. • The use of samples involving non-invasive sample collection is a key issue for clinical applications. [ABSTRACT FROM AUTHOR]

The resolution and quantitation of pure spectra of minority components in measurements of chemical mixtures without prior knowledge of the mixture is a challenging problem. In this work, a combination of band target entropy minimization (BTEM) and target partial least squares (T-PLS) was used to obtain estimates for single pure component spectra and to calibrate those estimates in a true, one-at-a-time fashion. This approach allows for minor components to be targeted and their relative amounts estimated in the presence of other varying components in spectral data. The use of T-PLS estimation is an improvement to the BTEM method because it overcomes the need to identify all of the pure components prior to estimation. Estimated amounts from this combination were found to be similar to those obtained from a standard method, multivariate curve resolution-alternating least squares (MCR-ALS), on a simple, three component mixture dataset. Studies from two experimental datasets demonstrate where the combination of BTEM and T-PLS was used to model the pure component spectra and to obtain concentration profiles of minor components, but MCR-ALS could not. [ABSTRACT FROM AUTHOR]

Mass spectrometry imaging (MSI) is a technique that can map analyte spatial distribution directly onto a tissue section. This enables the spatial correlation of molecular entities with a tissue morphology to be investigated. Analyte annotation in MSI is intrinsically linked to the mass accuracy of the data. Mass accuracy and analyte identification are determined by such factors as the experimental set up and the data processing workflow. We present an MSI data processing workflow that uses a label-free approach to compensate for mass shifts. The algorithms developed were designed to perform efficiently even for datasets much larger than computer's memory. Herein, we present the application of the developed processing workflow to a dataset with more than 13.000 pixels and ∼50.000 mass channels. We assessed the overall mass accuracy in the range m/z 400 to 1200 using silver and gold sputtered nanolayers. With our novel processing workflow we were able to obtain mass errors as low as 5 ppm using a TOF instrument. [ABSTRACT FROM AUTHOR]

Principal Component Analysis (PCA) is widely used in analytical chemistry, to reduce the dimensionality of a multivariate data set in a few Principal Components (PCs) that summarize the predominant patterns in the data. An accurate estimate of the number of PCs is indispensable to provide meaningful interpretations and extract useful information. We show how existing estimates for the number of PCs may fall short for datasets with considerable coherence, noise or outlier presence. We present here how Angle Distribution of the Loading Subspaces (ADLS) can be used to estimate the number of PCs based on the variability of loading subspace across bootstrap resamples. Based on comprehensive comparisons with other well-known methods applied on simulated dataset, we show that ADLS (1) may quantify the stability of a PCA model with several numbers of PCs simultaneously; (2) better estimate the appropriate number of PCs when compared with the cross-validation and scree plot methods, specifically for coherent data, and (3) facilitate integrated outlier detection, which we introduce in this manuscript. We, in addition, demonstrate how the analysis of different types of real-life spectroscopic datasets may benefit from these advantages of ADLS. [ABSTRACT FROM AUTHOR]

Generative adversarial linear discriminant analysis (GALDA) is formulated as a broadly applicable tool for increasing classification accuracy and reducing overfitting in spectrochemical analysis. Although inspired by the successes of generative adversarial neural networks (GANs) for minimizing overfitting artifacts in artificial neural networks, GALDA was built around an independent linear algebra framework distinct from those in GANs. In contrast to feature extraction and data reduction approaches for minimizing overfitting, GALDA performs data augmentation by identifying and adversarially excluding the regions in spectral space in which genuine data do not reside. Relative to non-adversarial analogs, loading plots for dimension reduction showed significant smoothing and more prominent features aligned with spectral peaks following generative adversarial optimization. Classification accuracy was evaluated for GALDA together with other commonly available supervised and unsupervised methods for dimension reduction in simulated spectra generated using an open-source Raman database (Romanian Database of Raman Spectroscopy, RDRS). Spectral analysis was then performed for microscopy measurements of microsphereroids of the blood thinner clopidogrel bisulfate and in THz Raman imaging of common constituents in aspirin tablets. From these collective results, the potential scope of use for GALDA is critically evaluated relative to alternative established spectral dimension reduction and classification methods. [Display omitted] • Generative adversarial linear discriminant analysis (GALDA) was developed for spectral classification. • A theoretical foundation for implementing GALDA for spectral dimension reduction and classification was derived. • Simulations with known ground truth spectral classes supported the assessment of GALDA. • Application of GALDA improved classification accuracy in polymorph discrimination by conventional Raman spectroscopy. • Pixel-wise application of GALDA produced composition maps in good agreement with manual assignments for model system. [ABSTRACT FROM AUTHOR]

The modification of graphene with biomacromolecules like DNA, protein, peptide, and others extends the potential applications of graphene materials in various fields. The bound biomacromolecules could improve the biocompatibility and bio-recognition ability of graphene-based nanocomposites, therefore could greatly enhance their biosensing performances on both selectivity and sensitivity. In this review, we presented a comprehensive introduction and discussion on recent advance in the synthesis and biosensor applications of graphene-peptide nanocomposites. The biofunctionalization of graphene with specifically designed peptides, and the synthesis strategies of graphene-peptide (monomer, nanofibrils, and nanotubes) nanocomposites were demonstrated. On the other hand, the fabrication of graphene-peptide nanocomposite based biosensor architectures for electrochemical, fluorescent, electronic, and spectroscopic biosensing were further presented. This review includes nearly all the studies on the fabrication and applications of graphene-peptide based biosensors recently, which will promote the future developments of graphene-based biosensors in biomedical detection and environmental analysis. [ABSTRACT FROM AUTHOR]

It is well known that the coexisting metal ions could significantly influence the atomic spectroscopy (AS) analysis. In this work, a cation-modulated mercury ions (Hg 2+ ) strategy via chemical vapor generation (CVG) was developed for oxalate assay due to the phenomenon that the Ag  +  can significantly reduce the Hg 2+ signal. The regulation effect was studied in depth via experimental investigations. Since Ag  +  can be reduced to silver nanoparticles (Ag NPs) by reductant SnCl 2 , the decrease of the Hg 2+ signal is attributed to the formation of a silver-mercury (Ag-Hg) amalgam. Due to the oxalate can react with Ag  +  to generate Ag 2 C 2 O 4 , which can reduce the generation of Ag-Hg amalgam, a portable and low-power point discharge chemical vapor generation atomic emission spectrometry (PD-CVG-AES) system was constructed to quantify the content of oxalate via monitoring the signal of Hg 2+ . Under optimal conditions, the limit of detection (LOD) was as low as 40 nM in the range of 0.1-10 μM for oxalate assay, while exhibiting good specificity. This method was applied to quantitative oxalate in 50 clinical urine samples of urinary stones patients. The levels of oxalate detected in clinical samples were consistent with clinical imaging results, which is promising for point-of-care testing in clinical diagnosis., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)

Monitoring the dimerization state of the mesenchymal-epithelial transition factor (Met) was essential for in-depth understanding of the tumor signal transduction network. At present, the dimerization activation pathway of Met protein was mainly studied at the macro level, while the research at the single molecule level was far from comprehensive. Herein, the dimerization activation of Met protein's extracellular domain induced by ligand hepatocyte growth factor (HGF) was dynamically studied by single-molecule force spectroscopy. Met protein was immobilized on a biomimetic lipid membrane for ensuring its physiological environment, and then the Met dimers were recognized by bivalent probe which was formed by two Met-binding aptamers. Then the dimeric state of Met protein could be distinguished from monomeric state of Met protein through some parameters, (such as unimodal ratio, bimodal ratio and separation work). The unimodal indicates the occurrence of single molecule binding event, and the bimodal represents the occurrence of double binding event (also represents the presence of Met dimer). Before HGF treatment, most of the Met protein on the lipid membrane was still in the form of monomer, so the unimodal ratio in the force curve was larger (78.8 ± 5.2%), and the bimodal ratio was smaller (17.0 ± 4.1%). After HGF treatment, the unimodal ratio decreased to 54.0 ± 7.4%, and the bimodal ratio increased to 43.2 ± 7.3%. It was due to the formation of dimers after the binding of Met protein on the fluidity lipid membrane with HGF. In addition, the average separation work increased to about 2 times after HGF treatment. Given that studies of Met protein dimerization inhibitors have contributed to the development of more potent and safe inhibitors to significantly inhibit tumor metastasis, the effects of different medicines (including anticoagulant medicines, different antibiotics and anti-cancer medicines) on the dimerization activation of Met protein were then explored by the platform described above. The results showed that anticoagulant medicines heparin and its analogs can significantly inhibit HGF-mediated Met protein activation, while different antibiotics and anticancer medicines had no significant effect on the dimerization of Met protein. This work provided a platform for studying protein dimerization as well as for screening Met protein dimerization inhibitors at the single-molecule level., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)

Peak broadening in ion mobility (IM) is a relatively predictable process and abnormally broad peaks can be indicative of the presence of unresolved species. Here, we introduce a new ion mobility peak fitting (IM_FIT) software package for automated and systematic determination of traveling wave ion mobility (TWIM) unresolved species. To identify IM unresolved species, the IM_FIT software generates a trend line by plotting ions' mobility peak widths as a function of their arrival times. Utilizing user-defined thresholds, IM_FIT allows for automated and rapid detection of ions that deviate from the peak width trend line. To demonstrate the advantages of IM_FIT for automated detection of IM unresolved species, IM-mass spectrometry (IM-MS) data from a sample mixture containing polypropylene glycol and multiple peptides were analyzed. A total of 14 out of the 34 observed singly-charged IM peaks above 5% relative abundance ( i.e., signal-to-noise ratios above ∼200) were tagged as potentially co-eluting ions by IM_FIT. Subsequently, the 14 IM peaks tagged as potentially unresolved (presumably, peaks corresponding to co-eluting compounds), were further analyzed by automated IM deconvolution (AIMD), liquid chromatography-IM-MS (LC-IM-MS), and/or ultra-high resolution mass spectrometry. Using the aforementioned techniques, more than 85% of the tagged IM peaks (12 out of 14) were confirmed to contain co-eluting ions. As an additional new finding, IM_FIT facilitated the discovery of an unexpected sequence-scrambled y-type fragment ion. [ABSTRACT FROM AUTHOR]

Sulfur isotope ratios are often used as biogeochemical tracers to gain understanding of abiotic and biological processes involved in the sulfur cycle in both modern and ancient environments. There is however a lack of matrix-matched well-characterized isotopic reference materials that are essential for controlling the accuracy and precision. This study therefore focused on expanding and complementing the currently available sulfur isotope ratio data by providing the bulk sulfur isotopic composition, as determined using multi-collector inductively coupled plasma-mass spectrometry (MC-ICP-MS), for a comprehensive set of commercially and/or readily available biological and geological reference materials. A total 7 isotopic reference materials and 41 elemental reference materials were studied. These reference materials include standards of terrestrial and marine animal origin, terrestrial plant origin, human origin, and geological origin. Different sample preparation protocols, including digestion and subsequent chromatographic isolation of S, were evaluated and the optimum approach selected for each matrix type. For achieving enhanced robustness, the sample preparation and sulfur isotope ratio measurements were done at two different laboratories for selected reference materials, while at one of the laboratories the measurements were additionally performed using two different MC-ICP-MS instruments. Determined δ 34 S VCDT and δ 33 S VCDT values compared well between the different laboratories, as well as between the different generation MC-ICP-MS instruments, and for standards that were previously characterized, our data are similar to literature values. The δ 34 S VCDT ranges determined for the different categories of the reference materials - terrestrial animal origin: +2 to +9‰, marine animal origin: +15 to +20‰, human origin: +6 to +10‰, terrestrial plant origin: -20 to +7‰, and geological origin: -12 to +21‰ - fit the expected values based on previous studies of similar types of matrices well. No significant mass-independent fractionation is observed when considering the expanded uncertainties for Δ 33 S V-CDT ., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper, (Copyright © 2022 Elsevier B.V. All rights reserved.)

To meet the demand for multi-element/isotope analysis at the single nanoparticle (NP) or cell level, different types of inductively coupled plasma mass spectroscopy (ICP-MS) have been used to simultaneously monitor multiple mass-to-charge ratios in single-particle/cell ICP-MS (SP/SC-ICP-MS) analysis. Systematic evaluation and comparison of the performance of these techniques are urgently required. Herein, three ICP-quadrupole (Q)-MS, two ICP-time of flight (TOF)-MS, and one multi-collector (MC)-ICP-MS instruments were employed to simultaneously detect 107 Ag and 109 Ag on single Ag NPs and Ag-exposed cyanobacteria cells. The evaluation was conducted by comparing the measured event-specific 109 Ag: 107 Ag ratios with the natural ratio. Duration of NP or cell events and time resolution in the peak hopping mode were the main factors affecting the performance of ICP-Q-MS. Under the optimal condition (100 μs for both dwell time and settling time), less than 45% of the NP or cell events had a 109 Ag: 107 Ag ratio deviating <30% from the natural ratio. Most events obtained via ICP-TOF-MS were paired events with both isotopes detected. For large-size NPs and cells with high exposure levels, nearly 80% of the events had a ratio deviation within ±30%. MC-ICP-MS performed particularly well in isotope determination with all the events having a ratio deviation within ±5%. For ICP-TOF-MS and MC-ICP-MS, the signal intensity of the events was the main factor affecting the accuracy of the measured 109 Ag: 107 Ag ratios due to the counting statistics. The established methods and results provide insight on the analyses of two elements/isotopes or more on single NPs or cells. Based on the comparison of the advantages and limitations of these instruments, this study provides a critical reference for future multi-element/isotope SP/SC-ICP-MS analyses., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)

Cysteine (Cys), one of cellular biothiols in the organism, is associated with many diseases, such as Parkinson's disease, Alzheimer's disease, liver damage, rheumatoid arthritis, and cancer. However, activatable fluorescence/photoacoustic (FL/PA) probes for non-invasive, real-time, and deep imaging of Cys in vivo are still lacking, and this hinders the diagnosis of Cys-related diseases. Herein, we designed and synthesized a novel activated FL/PA dual-modality cyanine-base probe (FP 700 ) for real-time detection of Cys. The probe FP 700 was established with near-infrared emissive dye cyanin as the fluorophore, linking with 2, 4-dinitrobenzenesulfonyl group as the recognition moiety for Cys. Using the FP 700 , we found that the FP 700 exhibited intensive "turn-on" FL/PA signals under the excitation of 700 nm, which realized noninvasive in vivo detection of exogenous Cys. Significantly, FP 700 accurately detected endogenous Cys though the FL/PA dual-mode imaging technology in tumor-bearing mice and obtain 3D PA diagnostic images with deep penetration depth and spatial resolution. Thus, the new dual-modality probe FP 700 has advantage of high potential for deep tumor diagnosis of Cys in vivo, which may provide a new approach for the detection of cervical cancer and identification of its potential therapeutic targets., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)

To achieve the quantitative elemental analysis of aluminum alloy samples, the one-point and multi-line calibration (OP-MLC) method and femtosecond laser-ablation spark-induced breakdown spectroscopy (fs-LA-SIBS) were combined in this study. An ultrafast Ti: sapphire laser with high single-pulse energy and high repetition-rate operation was used as the laser source to ablate the sample at a 1k Hz pulse repetition rate and achieve re-excitation using spark discharge. Subsequently, an enhanced spectral peak intensity was achieved, which increased the sensitivity and analytical capabilities of laser-induced breakdown spectroscopy (LIBS) technique. Considering only one confirmed sample, the OP-MLC method was used to calculate the concentration ratios of trace elements Mg, Cr, Cu, Mn and Zn in four aluminum alloy samples to the calibration samples by the integral intensity ratio of the elemental characteristic lines between the two samples. The average relative errors with the identified concentrations were 3.99%, 15.13%, 8.76%, 9.30% and 9.64%, respectively. The results showed that the combination of OP-MLC method and fs-LA-SIBS has good accuracy in the quantitative analysis of elements, and has the advantages of simplicity, rapidity and high sensitivity., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)

Many chemometric tools are invaluable and have proven effective in data mining and substantial dimensionality reduction of highly multivariate data. This becomes vital for interpreting various physicochemical data due to rapid development of advanced analytical techniques, delivering much information in a single measurement run. This concerns especially spectra, which are frequently used as the subject of comparative analysis in e.g. forensic sciences. In the presented study the microtraces collected from the scenarios of hit-and-run accidents were analysed. Plastic containers and automotive plastics (e.g. bumpers, headlamp lenses) were subjected to Fourier transform infrared spectrometry and car paints were analysed using Raman spectroscopy. In the forensic context analytical results must be interpreted and reported according to the standards of the interpretation schemes acknowledged in forensic sciences using the likelihood ratio approach. However, for proper construction of LR models for highly multivariate data, such as spectra, chemometric tools must be employed for substantial data compression. Conversion from classical feature representation to distance representation was proposed for revealing hidden data peculiarities and linear discriminant analysis was further applied for minimising the within-sample variability while maximising the between-sample variability. Both techniques enabled substantial reduction of data dimensionality. Univariate and multivariate likelihood ratio models were proposed for such data. It was shown that the combination of chemometric tools and the likelihood ratio approach is capable of solving the comparison problem of highly multivariate and correlated data after proper extraction of the most relevant features and variance information hidden in the data structure. [ABSTRACT FROM AUTHOR]

Sweat has recently gained popularity as clinical sample in metabolomics analysis as it is a non-invasive biofluid the composition of which could be modified by certain pathologies, as is the case with cystic fibrosis that increases chloride levels in sweat. However, the whole composition of sweat is still unknown and there is a lack of analytical strategies for sweat analysis. The aim of the present study was to develop and validate a method for metabolomic analysis of human sweat by gas chromatography–time of flight/mass spectrometry (GC–TOF/MS) in high resolution mode. Thus, different sample preparation strategies were compared to check their effect on the profile of sweat metabolites. Sixty-six compounds were tentatively identified by the obtained MS information. Amino acids, dicarboxylic acids and other interesting metabolites such as myo-inositol and urocanic acid were identified. Among the tested protocols, methyoxiamination plus silylation after deproteinization was the most suited option to obtain a representative snapshot of sweat metabolome. The intra-day repeatability of the method ranged from 0.60 to 16.99% and the inter-day repeatability from 2.75 to 31.25%. As most of the identified metabolites are involved in key biochemical pathways, this study opens new possibilities to the use of sweat as a source of metabolite biomarkers of specific disorders. [ABSTRACT FROM AUTHOR]

The use of reference solutions dispersed on filter paper discs is proposed for the first time as an external calibration strategy for matrix matching and determination of As, Cd, Co, Cr, Cu, Mn, Ni, Pb, Sr, V and Zn in plants by laser ablation-inductively coupled plasma mass spectrometry (LA-ICP-MS). The procedure is based on the use of filter paper discs as support for aqueous reference solutions, which are further evaporated, resulting in solid standards with concentrations up to 250 μg g −1 of each element. The use of filter paper for calibration is proposed as matrix matched standards due to the similarities of this material with botanical samples, regarding to carbon concentration and its distribution through both matrices. These characteristics allowed the use of 13 C as internal standard (IS) during the analysis by LA-ICP-MS. In this way, parameters as analyte signal normalization with 13 C, carrier gas flow rate, laser energy, spot size, and calibration range were monitored. The calibration procedure using solution deposition on filter paper discs resulted in precision improvement when 13 C was used as IS. The method precision was calculated by the analysis of a certified reference material (CRM) of botanical matrix, considering the RSD obtained for 5 line scans and was lower than 20%. Accuracy of LA-ICP-MS determinations were evaluated by analysis of four CRM pellets of botanical composition, as well as by comparison with results obtained by ICP-MS using solution nebulization after microwave assisted digestion. Plant samples of unknown elemental composition were analyzed by the proposed LA method and good agreement were obtained with results of solution analysis. Limits of detection (LOD) established for LA-ICP-MS were obtained by the ablation of 10 lines on the filter paper disc containing 40 μL of 5% HNO 3 (v v −1 ) as calibration blank. Values ranged from 0.05 to 0.81 μg g −1 . Overall, the use of filter paper as support for dried aqueous standards showed to be a useful strategy for calibration and plant analysis by LA-ICP-MS. [ABSTRACT FROM AUTHOR]

Using HG – AFS as a powerful tool to study valence transformations of Te, we found that, in presence of HCl and at high temperature, Te can form volatile species and be lost during sample digestion and pre-reduction steps. It was also noticed that the chemical valences of Te can be modified under different chemical and digestion conditions and even by samples themselves with certain matrices. KBr can reduce Te(VI) to Te(IV) in 3.0 M HCl at 100 °C, but when HNO 3 was >5% (v/v) in solution, Br 2 was formed and caused serious interference to Te measurements. HCl alone can also pre-reduce Te(VI) to Te(IV), only when its concentration was ≥6.0 M (100 °C for 15min). Among 10 studied chemical elements, only Cu 2+ caused severe interference. Thiourea is an effective masking agent only when Cu 2+ concentration is equal or lower than 10 mg/L. Chemical reagents, chemical composition of sample, as well as the modes of digestion can greatly affect Te valences, reagent blanks and analytical precisions. A protocol of 2–step–digestion followed by an elimination of HF is proposed to minimize reagent blank and increase the signal/noise ratios. It is important to perform a preliminary test to confirm whether a pre-reduction step is necessary; this is especially true for samples with complex matrices such as those with high sulfide content. The analytical detection limits of this method in a pure solution and a solid sample were 100 ng/L and 0.10 ± 0.02 μg/g, respectively. [ABSTRACT FROM AUTHOR]

Near infrared spectroscopy is an overtone spectroscopy regarded as a quick and non-destructive method that provides analytical solutions for components that represent approximately 1% or more of the total mass of the investigated composite samples. Aquaphotomics offers the possibility for disentanglement of information remaining hidden in the spectra when conventional data evaluation methods are used, since this concept utilizes changes of the water structure induced by the measured solute as specific molecular vibrations at water bands. Here, near infrared technique and aquaphotomics are applied for non-destructive identification and quantification of mono- and di-saccharide solutes at 100–0.02 mM concentration that is accepted as unachievable with near infrared spectroscopy. The results presented in this study support the aquaphotomics' water molecular mirror concept that explores spectral changes related to water molecular rearrangements caused by minute changes of the solutes in the aqueous systems. The method provides quick and accurate alternative for classical analytical measurements of saccharides even at millimolar concentration levels. [ABSTRACT FROM AUTHOR]