12 results on '"Toomes, C."'
Search Results
2. Mutations in WNT7A Cause a Range of Limb Malformations, Including Fuhrmann Syndrome and Al-Awadi/Raas-Rothschild/ Schinzel Phocomelia Syndrome.
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Woods, C. G., Stricker, S., Seemann, P., Stern, R., Cox, J., Sherridan, E., Roberts, E., Springell, K., Scott, S., Karbani, G., Sharif, S. M., Toomes, C., Bond, J., Kumar, D., Al-Gazali, L., and Mundlos, S.
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DISEASES , *DYSPLASIA , *PHENOTYPES , *SYNDROMES , *GENETICS , *GENETIC transformation - Abstract
Fuhrmann syndrome and the Al-Awadi/Raas-Rothschild/Schinzel phocomelia syndrome are considered to be distinct limb-malformation disorders characterized by various degrees of limb aplasia/hypoplasia and joint dysplasia in humans. In families with these syndromes, we found homozygous missense mutations in the dorsoventral-patterning geneWNT7A and confirmed their functional significance in retroviral-mediated transfection of chicken mesenchyme cell cultures and developing limbs. The results suggest that a partial loss of WNT7A function causes Fuhrmann syndrome (and a phenotype similar to mouse Wnt7a knockout), whereas the more-severe limb truncation phenotypes observed in Al-Awadi/Raas-Rothschild/Schinzel phocomelia syndrome result from null mutations (and cause a phenotype similar to mouse Shh knockout). These findings illustrate the specific and conserved importance of WNT7A in multiple aspects of vertebrate limb development. [ABSTRACT FROM AUTHOR]
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- 2006
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3. Recessive Mutations in SLC38A8 Cause Foveal Hypoplasia and Optic Nerve Misrouting without Albinism
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Eamonn Sheridan, Chris F. Inglehearn, Murugan Saktivel, Phillis Lakeman, Rohit Shetty, Anandula Venkataramana, Manir Ali, Sabrina Carrella, Bishwanath Pal, Ian M. Carr, Alex W. Hewitt, James A. Poulter, Maria M. van Genderen, Musallam Al-Araimi, Govindasamy Kumaramanickavel, Vedam L. Ramprasad, Mike Shires, David A. Mackey, David A. Parry, Carmel Toomes, Kamron N. Khan, Andrew R. Webster, Panagiotis I. Sergouniotis, Anthony T. Moore, Sandro Banfi, Moin Mohamed, Alex Tai Loong Tan, Ivan Conte, John Bradbury, Poulter, J. A., Al-Araimi, M., Conte, I., Van Genderen, M. M., Sheridan, E., Carr, I. M., Parry, D. A., Shires, M., Carrella, S., Bradbury, J., Khan, K., Lakeman, P., Sergouniotis, P. I., Webster, A. R., Moore, A. T., Pal, B., Mohamed, M. D., Venkataramana, A., Ramprasad, V., Shetty, R., Saktivel, M., Kumaramanickavel, G., Tan, A., Mackey, D. A., Hewitt, A. W., Banfi, S., Ali, M., Inglehearn, C. F., Toomes, C., Human Genetics, Human genetics, Other Research, Poulter, Ja, Al Araimi, M, Conte, I, van Genderen, Mm, Sheridan, E, Carr, Im, Parry, Da, Shires, M, Carrella, S, Bradbury, J, Khan, K, Lakeman, P, Sergouniotis, Pi, Webster, Ar, Moore, At, Pal, B, Mohamed, Md, Venkataramana, A, Ramprasad, V, Shetty, R, Saktivel, M, Kumaramanickavel, G, Tan, A, Mackey, Da, Hewitt, Aw, Banfi, Sandro, Ali, M, and Inglehearn, Cf
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Male ,Fovea Centralis ,Amino Acid Transport Systems ,genetic structures ,Neutral ,DNA Mutational Analysis ,Neurodegenerative ,Medical and Health Sciences ,Consanguinity ,0302 clinical medicine ,Foveal ,2.1 Biological and endogenous factors ,Genetics(clinical) ,Aetiology ,Child ,Genetics (clinical) ,Pediatric ,Genetics & Heredity ,Genetics ,0303 health sciences ,education.field_of_study ,Homozygote ,Syndrome ,Biological Sciences ,Hypoplasia ,Pedigree ,Phenotype ,Optic nerve ,Albinism ,Female ,Human ,Population ,Single-nucleotide polymorphism ,Locus (genetics) ,Genes, Recessive ,Biology ,DNA Mutational Analysi ,03 medical and health sciences ,Clinical Research ,medicine ,Recessive ,Animals ,Humans ,education ,Eye Disease and Disorders of Vision ,030304 developmental biology ,Fovea Centrali ,Animal ,Neurosciences ,Optic Nerve ,medicine.disease ,eye diseases ,Amino Acid Transport Systems, Neutral ,Genes ,Mutation ,030221 ophthalmology & optometry ,Congenital Structural Anomalies ,sense organs - Abstract
Foveal hypoplasia and optic nerve misrouting are developmental defects of the visual pathway and only co-occur in connection with albinism; to date, they have only been associated with defects in the melanin-biosynthesis pathway. Here, we report that these defects can occur independently of albinism in people with recessive mutations in the putative glutamine transporter gene SLC38A8. Nine different mutations were identified in seven Asian and European families. Using morpholino-mediated ablation of Slc38a8 in medaka fish, we confirmed that pigmentation is unaffected by loss of SLC38A8. Furthermore, by undertaking an association study with SNPs at the SLC38A8 locus, we showed that common variants within this gene modestly affect foveal thickness in the general population. This study reveals a melanin-independent component underpinning the development of the visual pathway that requires a functional role for SLC38A8.
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- 2013
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4. Defects in the Cell Signaling Mediator β-Catenin Cause the Retinal Vascular Condition FEVR.
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Panagiotou ES, Sanjurjo Soriano C, Poulter JA, Lord EC, Dzulova D, Kondo H, Hiyoshi A, Chung BH, Chu YW, Lai CHY, Tafoya ME, Karjosukarso D, Collin RWJ, Topping J, Downey LM, Ali M, Inglehearn CF, and Toomes C
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- Base Sequence, Eye Diseases, Hereditary, Familial Exudative Vitreoretinopathies, Female, Heterozygote, Humans, Luciferases metabolism, Male, Models, Biological, Mutant Proteins metabolism, Mutation genetics, Pedigree, Phenotype, Transcription, Genetic, Retinal Diseases genetics, Signal Transduction, beta Catenin metabolism
- Abstract
Familial exudative vitreoretinopathy (FEVR) is an inherited blinding disorder characterized by the abnormal development of the retinal vasculature. The majority of mutations identified in FEVR are found within four genes that encode the receptor complex (FZD4, LRP5, and TSPAN12) and ligand (NDP) of a molecular pathway that controls angiogenesis, the Norrin-β-catenin signaling pathway. However, half of all FEVR-affected case subjects do not harbor mutations in these genes, indicating that further mutated genes remain to be identified. Here we report the identification of mutations in CTNNB1, the gene encoding β-catenin, as a cause of FEVR. We describe heterozygous mutations (c.2142_2157dup [p.His720
∗ ] and c.2128C>T [p.Arg710Cys]) in two dominant FEVR-affected families and a de novo mutation (c.1434_1435insC [p.Glu479Argfs∗ 18]) in a simplex case subject. Previous studies have reported heterozygous de novo CTNNB1 mutations as a cause of syndromic intellectual disability (ID) and autism spectrum disorder, and somatic mutations are linked to many cancers. However, in this study we show that Mendelian inherited CTNNB1 mutations can cause non-syndromic FEVR and that FEVR can be a part of the syndromic ID phenotype, further establishing the role that β-catenin signaling plays in the development of the retinal vasculature., (Copyright © 2017 American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.)- Published
- 2017
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5. Mutations in TSPAN12 Cause Autosomal-Dominant Familial Exudative Vitreoretinopathy.
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Poulter JA, Ali M, Gilmour DF, Rice A, Kondo H, Hayashi K, Mackey DA, Kearns LS, Ruddle JB, Craig JE, Pierce EA, Downey LM, Mohamed MD, Markham AF, Inglehearn CF, and Toomes C
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- 2016
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6. Biallelic mutations in the autophagy regulator DRAM2 cause retinal dystrophy with early macular involvement.
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El-Asrag ME, Sergouniotis PI, McKibbin M, Plagnol V, Sheridan E, Waseem N, Abdelhamed Z, McKeefry D, Van Schil K, Poulter JA, Johnson CA, Carr IM, Leroy BP, De Baere E, Inglehearn CF, Webster AR, Toomes C, and Ali M
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- Adult, Base Sequence, Exome genetics, Homozygote, Humans, Immunohistochemistry, Membrane Proteins metabolism, Molecular Sequence Data, Pakistan ethnology, Pedigree, Sequence Analysis, DNA, United Kingdom, Macular Degeneration genetics, Macular Degeneration pathology, Membrane Proteins genetics, Mutation genetics, Retinal Dystrophies genetics, Retinal Dystrophies pathology
- Abstract
Retinal dystrophies are an overlapping group of genetically heterogeneous conditions resulting from mutations in more than 250 genes. Here we describe five families affected by an adult-onset retinal dystrophy with early macular involvement and associated central visual loss in the third or fourth decade of life. Affected individuals were found to harbor disease-causing variants in DRAM2 (DNA-damage regulated autophagy modulator protein 2). Homozygosity mapping and exome sequencing in a large, consanguineous British family of Pakistani origin revealed a homozygous frameshift variant (c.140delG [p.Gly47Valfs(∗)3]) in nine affected family members. Sanger sequencing of DRAM2 in 322 unrelated probands with retinal dystrophy revealed one European subject with compound heterozygous DRAM2 changes (c.494G>A [p.Trp165(∗)] and c.131G>A [p.Ser44Asn]). Inspection of previously generated exome sequencing data in unsolved retinal dystrophy cases identified a homozygous variant in an individual of Indian origin (c.64_66del [p.Ala22del]). Independently, a gene-based case-control association study was conducted via an exome sequencing dataset of 18 phenotypically similar case subjects and 1,917 control subjects. Using a recessive model and a binomial test for rare, presumed biallelic, variants, we found DRAM2 to be the most statistically enriched gene; one subject was a homozygote (c.362A>T [p.His121Leu]) and another a compound heterozygote (c.79T>C [p.Tyr27His] and c.217_225del [p.Val73_Tyr75del]). DRAM2 encodes a transmembrane lysosomal protein thought to play a role in the initiation of autophagy. Immunohistochemical analysis showed DRAM2 localization to photoreceptor inner segments and to the apical surface of retinal pigment epithelial cells where it might be involved in the process of photoreceptor renewal and recycling to preserve visual function., (Copyright © 2015 The American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.)
- Published
- 2015
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7. Homozygous mutations in PXDN cause congenital cataract, corneal opacity, and developmental glaucoma.
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Khan K, Rudkin A, Parry DA, Burdon KP, McKibbin M, Logan CV, Abdelhamed ZI, Muecke JS, Fernandez-Fuentes N, Laurie KJ, Shires M, Fogarty R, Carr IM, Poulter JA, Morgan JE, Mohamed MD, Jafri H, Raashid Y, Meng N, Piseth H, Toomes C, Casson RJ, Taylor GR, Hammerton M, Sheridan E, Johnson CA, Inglehearn CF, Craig JE, and Ali M
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- Animals, Base Sequence, Cataract pathology, Cornea metabolism, Cornea pathology, Corneal Opacity pathology, Extracellular Matrix Proteins chemistry, Extracellular Matrix Proteins metabolism, Glaucoma pathology, Humans, Mice, Microscopy, Fluorescence, Molecular Sequence Data, Mutation genetics, Pedigree, Peroxidase chemistry, Peroxidase metabolism, Sequence Analysis, DNA, Peroxidasin, Cataract genetics, Corneal Opacity genetics, Extracellular Matrix Proteins genetics, Genetic Predisposition to Disease genetics, Glaucoma genetics, Models, Molecular, Peroxidase genetics
- Abstract
Anterior segment dysgenesis describes a group of heterogeneous developmental disorders that affect the anterior chamber of the eye and are associated with an increased risk of glaucoma. Here, we report homozygous mutations in peroxidasin (PXDN) in two consanguineous Pakistani families with congenital cataract-microcornea with mild to moderate corneal opacity and in a consanguineous Cambodian family with developmental glaucoma and severe corneal opacification. These results highlight the diverse ocular phenotypes caused by PXDN mutations, which are likely due to differences in genetic background and environmental factors. Peroxidasin is an extracellular matrix-associated protein with peroxidase catalytic activity, and we confirmed localization of the protein to the cornea and lens epithelial layers. Our findings imply that peroxidasin is essential for normal development of the anterior chamber of the eye, where it may have a structural role in supporting cornea and lens architecture as well as an enzymatic role as an antioxidant enzyme in protecting the lens, trabecular meshwork, and cornea against oxidative damage., (Copyright © 2011 The American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.)
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- 2011
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8. Mutations in TSPAN12 cause autosomal-dominant familial exudative vitreoretinopathy.
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Poulter JA, Ali M, Gilmour DF, Rice A, Kondo H, Hayashi K, Mackey DA, Kearns LS, Ruddle JB, Craig JE, Pierce EA, Downey LM, Mohamed MD, Markham AF, Inglehearn CF, and Toomes C
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- Amino Acid Sequence, Base Sequence, DNA Mutational Analysis, Humans, Membrane Proteins chemistry, Molecular Sequence Data, Retinal Diseases pathology, Sequence Alignment, Sequence Homology, Amino Acid, Tetraspanins, Genes, Dominant genetics, Membrane Proteins genetics, Mutation genetics, Retinal Diseases genetics
- Abstract
Familial exudative vitreoretinopathy (FEVR) is an inherited blinding disorder of the retinal vascular system. Although mutations in three genes (LRP5, FZD4, and NDP) are known to cause FEVR, these account for only a fraction of FEVR cases. The proteins encoded by these FEVR genes form part of a signaling complex that activates the Norrin-beta-catenin signaling pathway. Recently, through a large-scale reverse genetic screen in mice, Junge and colleagues identified an additional member of this signaling complex, Tspan12. Here, we report that mutations in TSPAN12 also cause autosomal-dominant FEVR. We describe seven mutations identified in a cohort of 70 FEVR patients in whom we had already excluded the known FEVR genes. This study provides further evidence for the importance of the Norrin-beta-catenin signaling pathway in the development of the retinal vasculature and also indicates that more FEVR genes remain to be identified., (Copyright (c) 2010 The American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.)
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- 2010
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9. Null mutations in LTBP2 cause primary congenital glaucoma.
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Ali M, McKibbin M, Booth A, Parry DA, Jain P, Riazuddin SA, Hejtmancik JF, Khan SN, Firasat S, Shires M, Gilmour DF, Towns K, Murphy AL, Azmanov D, Tournev I, Cherninkova S, Jafri H, Raashid Y, Toomes C, Craig J, Mackey DA, Kalaydjieva L, Riazuddin S, and Inglehearn CF
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- Chromosome Mapping, Consanguinity, Glaucoma congenital, Humans, Latent TGF-beta Binding Proteins metabolism, Mutation, Pedigree, Ciliary Body metabolism, Glaucoma genetics, Latent TGF-beta Binding Proteins genetics
- Abstract
Primary congenital glaucoma (PCG) is an autosomal-recessive condition characterized by high intraocular pressure (IOP), usually within the first year of life, which potentially could lead to optic nerve damage, globe enlargement, and permanent loss of vision. To date, PCG has been linked to three loci: 2p21 (GLC3A), for which the responsible gene is CYP1B1, and 1p36 (GLC3B) and 14q24 (GLC3C), for which the genes remain to be identified. Here we report that null mutations in LTBP2 cause PCG in four consanguineous families from Pakistan and in patients of Gypsy ethnicity. LTBP2 maps to chromosome 14q24.3 but is around 1.3 Mb proximal to the documented GLC3C locus. Therefore, it remains to be determined whether LTBP2 is the GLC3C gene or whether a second adjacent gene is also implicated in PCG. LTBP2 is the largest member of the latent transforming growth factor (TGF)-beta binding protein family, which are extracellular matrix proteins with multidomain structure. It has homology to fibrillins and may have roles in cell adhesion and as a structural component of microfibrils. We confirmed localization of LTBP2 in the anterior segment of the eye, at the ciliary body, and particularly the ciliary process. These findings reveal that LTBP2 is essential for normal development of the anterior chamber of the eye, where it may have a structural role in maintaining ciliary muscle tone.
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- 2009
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10. Loss of the metalloprotease ADAM9 leads to cone-rod dystrophy in humans and retinal degeneration in mice.
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Parry DA, Toomes C, Bida L, Danciger M, Towns KV, McKibbin M, Jacobson SG, Logan CV, Ali M, Bond J, Chance R, Swendeman S, Daniele LL, Springell K, Adams M, Johnson CA, Booth AP, Jafri H, Rashid Y, Banin E, Strom TM, Farber DB, Sharon D, Blobel CP, Pugh EN Jr, Pierce EA, and Inglehearn CF
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- Animals, Consanguinity, Genetic Predisposition to Disease, Humans, Mice, Mice, Knockout, Mutation, Pedigree, Photoreceptor Cells, Vertebrate pathology, Retinal Degeneration pathology, Retinal Pigment Epithelium pathology, ADAM Proteins genetics, Membrane Proteins genetics, Retinal Degeneration genetics, Retinitis Pigmentosa genetics
- Abstract
Cone-rod dystrophy (CRD) is an inherited progressive retinal dystrophy affecting the function of cone and rod photoreceptors. By autozygosity mapping, we identified null mutations in the ADAM metallopeptidase domain 9 (ADAM9) gene in four consanguineous families with recessively inherited early-onset CRD. We also found reduced photoreceptor responses in Adam9 knockout mice, previously reported to be asymptomatic. In 12-month-old knockout mice, photoreceptors appear normal, but the apical processes of the retinal pigment epithelium (RPE) cells are disorganized and contact between photoreceptor outer segments (POSs) and the RPE apical surface is compromised. In 20-month-old mice, there is clear evidence of progressive retinal degeneration with disorganized POS and thinning of the outer nuclear layer (ONL) in addition to the anomaly at the POS-RPE junction. RPE basal deposits and macrophages were also apparent in older mice. These findings therefore not only identify ADAM9 as a CRD gene but also identify a form of pathology wherein retinal disease first manifests at the POS-RPE junction.
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- 2009
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11. Mutations in LRP5 or FZD4 underlie the common familial exudative vitreoretinopathy locus on chromosome 11q.
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Toomes C, Bottomley HM, Jackson RM, Towns KV, Scott S, Mackey DA, Craig JE, Jiang L, Yang Z, Trembath R, Woodruff G, Gregory-Evans CY, Gregory-Evans K, Parker MJ, Black GC, Downey LM, Zhang K, and Inglehearn CF
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- Amino Acid Sequence, Base Sequence, Exons genetics, Female, Frizzled Receptors, Humans, Introns genetics, LDL-Receptor Related Proteins, Low Density Lipoprotein Receptor-Related Protein-5, Male, Models, Molecular, Molecular Sequence Data, Pedigree, Polymorphism, Single-Stranded Conformational, Protein Structure, Tertiary, Receptors, Cell Surface, Receptors, G-Protein-Coupled, Receptors, LDL chemistry, Retinal Diseases pathology, Chromosomes, Human, Pair 11 genetics, Mutation genetics, Proteins genetics, Receptors, LDL genetics, Retinal Diseases genetics
- Abstract
Familial exudative vitreoretinopathy (FEVR) is an inherited blinding disorder of the retinal vascular system. Autosomal dominant FEVR is genetically heterogeneous, but its principal locus, EVR1, is on chromosome 11q13-q23. The gene encoding the Wnt receptor frizzled-4 (FZD4) was recently reported to be the EVR1 gene, but our mutation screen revealed fewer patients harboring mutations than expected. Here, we describe mutations in a second gene at the EVR1 locus, low-density-lipoprotein receptor-related protein 5 (LRP5), a Wnt coreceptor. This finding further underlines the significance of Wnt signaling in the vascularization of the eye and highlights the potential dangers of using multiple families to refine genetic intervals in gene-identification studies.
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- 2004
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12. Identification of microcephalin, a protein implicated in determining the size of the human brain.
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Jackson AP, Eastwood H, Bell SM, Adu J, Toomes C, Carr IM, Roberts E, Hampshire DJ, Crow YJ, Mighell AJ, Karbani G, Jafri H, Rashid Y, Mueller RF, Markham AF, and Woods CG
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- Adolescent, Adult, Amino Acid Sequence, Animals, Base Sequence, Brain pathology, Cell Cycle Proteins, Child, Chromosomes, Human, Pair 8 genetics, Cloning, Molecular, Cytoskeletal Proteins, DNA genetics, DNA Mutational Analysis, Embryonic and Fetal Development genetics, Female, Gene Expression Regulation, Developmental, Humans, In Situ Hybridization, Male, Mice, Microcephaly pathology, Molecular Sequence Data, Organ Size genetics, RNA, Messenger genetics, RNA, Messenger metabolism, Sequence Homology, Amino Acid, Brain anatomy & histology, Microcephaly genetics, Nerve Tissue Proteins genetics
- Abstract
Primary microcephaly (MIM 251200) is an autosomal recessive neurodevelopmental condition in which there is a global reduction in cerebral cortex volume, to a size comparable with that of early hominids. We previously mapped the MCPH1 locus, for primary microcephaly, to chromosome 8p23, and here we report that a gene within this interval, encoding a BRCA1 C-terminal domain-containing protein, is mutated in MCPH1 families sharing an ancestral 8p23 haplotype. This gene, microcephalin, is expressed in the developing cerebral cortex of the fetal brain. Further study of this and related genes may provide important new insights into neocortical development and evolution.
- Published
- 2002
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