1. Identification of quercitrin as an inhibitor of the p90 S6 ribosomal kinase (RSK): structure of its complex with the N-terminal domain of RSK2 at 1.8 Å resolution.
- Author
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Derewenda, Urszula, Artamonov, Mykhaylo, Szukalska, Gabriela, Utepbergenov, Darkhan, Olekhnovich, Natalya, Parikh, Hardik I., Kellogg, Glen E., Somlyo, Avril V., and Derewenda, Zygmunt S.
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FLAVONOL glycosides , *KINASE inhibitors , *CRYSTAL structure , *DRUG design , *TARGETED drug delivery , *COMPARATIVE studies - Abstract
Members of the RSK family of kinases constitute attractive targets for drug design, but a lack of structural information regarding the mechanism of selective inhibitors impedes progress in this field. The crystal structure of the N-terminal kinase domain (residues 45-346) of mouse RSK2, or RSK2NTKD, has recently been described in complex with one of only two known selective inhibitors, a rare naturally occurring flavonol glycoside, kaempferol 3- O-(3′′,4′′-di- O-acetyl-α-L-rhamnopyranoside), known as SL0101. Based on this structure, it was hypothesized that quercitrin (quercetin 3- O-α-L-rhamnopyranoside), a related but ubiquitous and inexpensive compound, might also act as an RSK inhibitor. Here, it is demonstrated that quercitrin binds to RSK2NTKD with a dissociation constant ( Kd) of 5.8 µ M as determined by isothermal titration calorimetry, and a crystal structure of the binary complex at 1.8 Å resolution is reported. The crystal structure reveals a very similar mode of binding to that recently reported for SL0101. Closer inspection shows a number of small but significant differences that explain the slightly higher Kd for quercitrin compared with SL0101. It is also shown that quercitrin can effectively substitute for SL0101 in a biological assay, in which it significantly suppresses the contractile force in rabbit pulmonary artery smooth muscle in response to Ca2+. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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