82 results on '"Janet M. Thornton"'
Search Results
2. GRaSP-web: a machine learning strategy to predict binding sites based on residue neighborhood graphs.
3. PDBe-KB: collaboratively defining the biological context of structural data.
4. Srinivasan (1962-2021) in Bioinformatics and beyond.
5. PDBe-KB: a community-driven resource for structural and functional annotations.
6. CATH: expanding the horizons of structure-based functional annotations for genome sequences.
7. Mechanism and Catalytic Site Atlas (M-CSA): a database of enzyme reaction mechanisms and active sites.
8. VarMap: a web tool for mapping genomic coordinates to protein sequence and structure and retrieving protein structural annotations.
9. Transform-MinER: transforming molecules in enzyme reactions.
10. Using the drug-protein interactome to identify anti-ageing compounds for humans.
11. An automated protocol for modelling peptide substrates to proteases.
12. Finding enzyme cofactors in Protein Data Bank.
13. CATH: comprehensive structural and functional annotations for genome sequences.
14. Delivering ICT infrastructure for biomedical research.
15. Comparison of the mammalian insulin signalling pathway to invertebrates in the context of FOXO-mediated ageing.
16. The Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymes.
17. The European Bioinformatics Institute's data resources 2014.
18. PDBsum additions.
19. Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites.
20. SurvCurv database and online survival analysis platform update.
21. Software Engineering Challenges in Bioinformatics.
22. SCOPEC: a database of protein catalytic domains.
23. New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures.
24. The EBI enzyme portal.
25. FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies.
26. Extending CATH: increasing coverage of the protein structure universe and linking structure with function.
27. The European Bioinformatics Institute's data resources.
28. The CATH classification revisited - architectures reviewed and new ways to characterize structural divergence in superfamilies.
29. Mapping Human Metabolic Pathways in the Small Molecule Chemical Space.
30. The Protein Feature Ontology: a tool for the unification of protein feature annotations.
31. PROCOGNATE: a cognate ligand domain mapping for enzymes.
32. Analysis of binding site similarity, small-molecule similarity and experimental binding profiles in the human cytosolic sulfotransferase family.
33. MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms.
34. The CATH domain structure database: new protocols and classification levels give a more comprehensive resource for exploring evolution.
35. Comparisons of Allergenic and Metazoan Parasite Proteins: Allergy the Price of Immunity.
36. ISMB/ECCB 2004 Organization.
37. Real spherical harmonic expansion coefficients as 3D shape descriptors for protein binding pocket and ligand comparisons.
38. The European Bioinformatics Institute's data resources: towards systems biology.
39. ProFunc: a server for predicting protein function from 3D structure.
40. The CATH Domain Structure Database and related resources Gene3D and DHS provide comprehensive domain family information for genome analysis.
41. An examination of the conservation of surface patch polarity for proteins.
42. A practical and robust sequence search strategy for structural genomics target selection.
43. The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data.
44. Reaction Decoder Tool (RDT): extracting features from chemical reactions.
45. Recognizing the fold of a protein structure.
46. An algorithm for constraint-based structural template matching: application to 3D templates with statistical analysis.
47. The CATH database: an extended protein family resource for structural and functional genomics.
48. Gene3D: structural assignments for the biologist and bioinformaticist alike.
49. A Computer System to Perform Structure Comparison using Representations of Protein Structure.
50. Amino acid?base interactions: a three-dimensional analysis of protein?DNA interactions at an atomic level.
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