26 results on '"Ozbek, Pemra"'
Search Results
2. Piperidine-based natural products targeting Type IV pili antivirulence: A computational approach
3. Epistatic Effects Between Amino Acid Insertions and Substitutions Mediate Toxin resistance of Vertebrate Na+,K+-ATPases
4. Epistatic effects between amino acid insertions and substitutions mediate toxin-resistance of vertebrate Na+,K+-ATPases
5. Assessment of 13 in silico pathogenicity methods on cancer-related variants
6. How Eppstein-Barr virus envelope glycoprotein gp350 tricks the CR2? A molecular dynamics study
7. Exploring the recognition differences of peptides in TCR-pMHC complex
8. Hydration modulates oxygen channel residues for oxygenation of cysteine dioxygenase: Perspectives from molecular dynamics simulations
9. Differential Interactome Based Drug Repositioning Unraveled Abacavir, Exemestane, Nortriptyline Hydrochloride, and Tolcapone as Potential Therapeutics for Colorectal Cancers
10. Unraveling the Allosteric Communication Mechanisms in T-Cell Receptor–Peptide-Loaded Major Histocompatibility Complex Dynamics Using Molecular Dynamics Simulations: An Approach Based on Dynamic Cross Correlation Maps and Residue Interaction Energy Calculations
11. Identification of novel inhibitors of the ABC transporter BmrA
12. Revisiting allostery in CREB-binding protein (CBP) using residue-based interaction energy
13. Sequence-structure-function relationships in class I MHC: A local frustration perspective
14. Computational investigation of peptide binding stabilities of HLA-B*27 and HLA-B*44 alleles
15. Sequence-structure-function relationships in class I MHC: a local frustration perspective
16. ProSNEx: a web-based application for exploration and analysis of protein structures using network formalism
17. How do mutations and allosteric inhibitors modulate caspase-7 activity? A molecular dynamics study
18. gRINN: a tool for calculation of residue interaction energies and protein energy network analysis of molecular dynamics simulations
19. Computational characterization of residue couplings and micropolymorphism-induced changes in the dynamics of two differentially disease-associated human MHC class-I alleles
20. A computational docking study on the pH dependence of peptide binding to HLA-B27 sub-types differentially associated with ankylosing spondylitis
21. Dynamic characterization of HLA-B*44 Alleles: A comparative molecular dynamics simulation study
22. Investigating Dynamics of HLA Molecules by Energy Dissipation
23. DynaFace: Discrimination between Obligatory and Non-obligatory Protein-Protein Interactions Based on the Complex’s Dynamics
24. Hot Spots in a Network of Functional Sites
25. Community-Wide Assessment of Protein-Interface Modeling Suggests Improvements to Design Methodology
26. DNABINDPROT: fluctuation-based predictor of DNA-binding residues within a network of interacting residues
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