65 results on '"Marth, Gabor T."'
Search Results
2. A Bayesian framework to study tumor subclone–specific expression by combining bulk DNA and single-cell RNA sequencing data
3. quickBAM: a parallelized BAM file access API for high-throughput sequence analysis informatics
4. Clonal Dynamics of ASM-AHN with Avapritinib Treatment
5. Subclonal evolution of CLL driver mutations is associated with relapse in ibrutinib- and acalabrutinib-treated patients
6. Abstract 2723: Model-based cancer therapy selection by linking tumor vulnerabilities to drug mechanism
7. A human breast cancer-derived xenograft and organoid platform for drug discovery and precision oncology
8. The Extracellular Milieu of Toxoplasma 's Lytic Cycle Drives Lab Adaptation, Primarily by Transcriptional Reprogramming
9. Novel temporal and spatial patterns of metastatic colonization from breast cancer rapid-autopsy tumor biopsies
10. quickBAM: a parallelized BAM file access API for high throughput sequence analysis informatics
11. High Body Mass Polygenic Risk in Mothers Enhances De Novo Functional Mutations in Epigenetic and Microtubule Gene Pathways in Their Offspring With Autism Spectrum Disorder
12. Novel temporal and spatial patterns of metastatic colonization from rapid-autopsy tumor biopsies
13. OncoGEMINI: software for investigating tumor variants from multiple biopsies with integrated cancer annotations
14. The extracellular milieu of Toxoplasma’s lytic cycle drives lab-adaptation and promotes changes in lipid metabolism primarily driven by transcriptional reprogramming
15. A breast cancer patient-derived xenograft and organoid platform for drug discovery and precision oncology
16. Abstract 1517: The integration of bulk DNA sequencing and single-cell analysis reveals diverse clonal evolution in CLL patients treated with BTKi
17. OncoGEMINI: Software for Investigating Tumor Variants From Multiple Biopsies With Integrated Cancer Annotations
18. The stochastic nature of errors in next-generation sequencing of circulating cell-free DNA
19. Abstract 2220: Benchmarking of somatic variant calling algorithms for detection of circulating tumor DNA
20. Abstract 2910: Multi-sites rapid-autopsy data reveals aggressive metastatic colonization and metastasis phenotypes
21. Abstract 441: The stochastic nature of errors in next-generation sequencing of circulating cell-free DNA
22. Abstract 2220: Benchmarking of somatic variant calling algorithms for detection of circulating tumor DNA
23. Abstract 441: The stochastic nature of errors in next-generation sequencing of circulating cell-free DNA
24. Abstract 2910: Multi-sites rapid-autopsy data reveals aggressive metastatic colonization and metastasis phenotypes
25. Multi-platform discovery of haplotype-resolved structural variation in human genomes
26. Genome-wide de novo risk score implicates promoter variation in autism spectrum disorder
27. Whole-genome analysis for effective clinical diagnosis and gene discovery in early infantile epileptic encephalopathy
28. Automated size selection for short cell-free DNA fragments enriches for circulating tumor DNA and improves error correction during next generation sequencing
29. Abstract LB-038: Predicting breast cancer therapy response using a patient-derived xenograft organoid screening platform
30. Abstract 2195: Temporal and spatial dynamics of metastatic colonization revealed by 26 rapid-autopsy tumor biopsies from a TNBC patient
31. An analytical framework for whole-genome sequence association studies and its implications for autism spectrum disorder
32. Ongoing clonal evolution in chronic myelomonocytic leukemia on hypomethylating agents: a computational perspective
33. GIGGLE: a search engine for large-scale integrated genome analysis
34. Rapid clinical diagnostic variant investigation of genomic patient sequencing data with iobio web tools
35. GIGGLE: a search engine for large-scale integrated genome analysis
36. Limited contribution of rare, noncoding variation to autism spectrum disorder from sequencing of 2,076 genomes in quartet families
37. SpeedSeq: ultra-fast personal genome analysis and interpretation
38. Extending reference assembly models
39. Toolbox for Mobile-Element Insertion Detection on Cancer Genomes
40. Computational SNP Discovery in DNA Sequence Data
41. SpeedSeq: Ultra-fast personal genome analysis and interpretation
42. bam.iobio: a web-based, real-time, sequence alignment file inspector
43. Tangram: a comprehensive toolbox for mobile element insertion detection
44. SubcloneSeeker: a computational framework for reconstructing tumor clone structure for cancer variant interpretation and prioritization
45. Whole genome profiling of spontaneous and chemically induced mutations in Toxoplasma gondii
46. MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
47. Toolbox for Mobile-Element Insertion Detection on Cancer Genomes
48. SSW Library: An SIMD Smith-Waterman C/C++ Library for Use in Genomic Applications
49. Genetic basis for phenotypic differences between different Toxoplasma gondii type I strains
50. Scotty: a web tool for designing RNA-Seq experiments to measure differential gene expression
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