39 results on '"Jamshidi N"'
Search Results
2. Genome‐scale metabolic modeling reveals SARS‐CoV‐2‐induced metabolic changes and antiviral targets
3. COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
4. Personalized whole‐body models integrate metabolism, physiology, and the gut microbiome
5. An integrated computational and experimental study uncovers FUT9 as a metabolic driver of colorectal cancer
6. Subspecies in the global human gut microbiome
7. De novo MYC addiction as an adaptive response of cancer cells to CDK4/6 inhibition
8. Transcriptomics resources of human tissues and organs
9. Reply to “Do genome‐scale models need exact solvers or clearer standards?”
10. Modeling cancer metabolism on a genome scale
11. A computational study of the Warburg effect identifies metabolic targets inhibiting cancer migration
12. Identification of anticancer drugs for hepatocellular carcinoma through personalized genome‐scale metabolic modeling
13. Glutamine‐driven oxidative phosphorylation is a major ATP source in transformed mammalian cells in both normoxia and hypoxia
14. Genome‐scale models of metabolism and gene expression extend and refine growth phenotype prediction
15. Basic and applied uses of genome‐scale metabolic network reconstructions of Escherichia coli
16. Dissecting specific and global transcriptional regulation of bacterial gene expression
17. Dissecting the energy metabolism in Mycoplasma pneumoniae through genome‐scale metabolic modeling
18. Integration of clinical data with a genome‐scale metabolic model of the human adipocyte
19. Model‐driven multi‐omic data analysis elucidates metabolic immunomodulators of macrophage activation
20. Prediction and identification of sequences coding for orphan enzymes using genomic and metagenomic neighbours
21. A comprehensive genome‐scale reconstruction of Escherichia coli metabolism—2011
22. Metabolic network reconstruction of Chlamydomonas offers insight into light‐driven algal metabolism
23. Predicting selective drug targets in cancer through metabolic networks
24. Protein localization as a principal feature of the etiology and comorbidity of genetic diseases
25. Comprehensive quantitative analysis of central carbon and amino‐acid metabolism in Saccharomyces cerevisiae under multiple conditions by targeted proteomics
26. Integrative genome‐scale metabolic analysis of Vibrio vulnificus for drug targeting and discovery
27. Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions
28. Towards whole‐body systems physiology
29. HepatoNet1: a comprehensive metabolic reconstruction of the human hepatocyte for the analysis of liver physiology
30. Computational reconstruction of tissue‐specific metabolic models: application to human liver metabolism
31. Reconstruction and flux‐balance analysis of the Plasmodium falciparum metabolic network
32. Omic data from evolved E. coli are consistent with computed optimal growth from genome‐scale models
33. Applications of genome‐scale metabolic reconstructions
34. Quantifying epistatic interactions among the components constituting the protein translation system
35. Predicting metabolic biomarkers of human inborn errors of metabolism
36. Finding multiple target optimal intervention in disease‐related molecular network
37. Metabolic model integration of the bibliome, genome, metabolome and reactome of Aspergillus niger
38. Systems analysis of metabolism in the pathogenic trypanosomatid Leishmania major
39. The Edinburgh human metabolic network reconstruction and its functional analysis
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