69 results on '"Zhen-Yu Qi"'
Search Results
2. Can Government Subsidies Promote the TFP of Enterprises? The Mediating Effect of R&D Decisions
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Zhen-Yu Qi and Si-Ying Yang
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Multidisciplinary ,Subsidy ,Business ,International economics ,China ,Total factor productivity - Abstract
This article empirically analyses the effect of government subsidies on total factor productivity (TFP) based on the data of listed manufacturing companies in China. The results indicate that government subsidies increase total productivity directly as well as indirectly by increasing R&D investment. The positive effect of government subsidies on TFP is higher in non-state-owned enterprises (non-SOEs) than in state-owned enterprises (SOEs), higher in central SOEs than local SOEs and higher in enterprises with lower rather than higher TFP. Furthermore, the mediating effects of R&D decisions also differ among different enterprises. Therefore, the government should implement differentiated subsidy policies to promote enterprises’ TFP.
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- 2021
3. HsfA1a confers pollen thermotolerance through upregulating antioxidant capacity, protein repair, and degradation in
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Dong-Ling, Xie, Hua-Min, Huang, Can-Yu, Zhou, Chen-Xu, Liu, Mukesh Kumar, Kanwar, Zhen-Yu, Qi, and Jie, Zhou
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The heat shock transcription factors (Hsfs) play critical roles in plant responses to abiotic stresses. However, the mechanism of Hsfs in the regulation of pollen thermotolerance and their specific biological functions and signaling remain unclear. Herein, we demonstrate that HsfA1a played a key role in tomato pollen thermotolerance. Pollen thermotolerance was reduced in
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- 2022
4. Evaluation of a highly refined prediction model in knowledge-based volumetric modulated arc therapy planning for cervical cancer
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Huikuan Gu, Jian Liang, Jiang Hu, Mingli Wang, Sisi Xu, and Zhen-Yu Qi
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Organs at Risk ,lcsh:Medical physics. Medical radiology. Nuclear medicine ,medicine.medical_specialty ,Knowledge based planning ,Knowledge Bases ,medicine.medical_treatment ,lcsh:R895-920 ,Uterine Cervical Neoplasms ,Knowledge-based planning ,lcsh:RC254-282 ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Prediction model ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Medical physics ,Clinical treatment ,Reliability (statistics) ,Cervical cancer ,business.industry ,Radiotherapy Planning, Computer-Assisted ,Research ,Volumetric modulated arc therapy ,medicine.disease ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Normal tissue sparing ,Radiation therapy ,Progressive training ,Oncology ,030220 oncology & carcinogenesis ,Female ,Radiotherapy, Intensity-Modulated ,business - Abstract
Background and purpose To explore whether a highly refined dose volume histograms (DVH) prediction model can improve the accuracy and reliability of knowledge-based volumetric modulated arc therapy (VMAT) planning for cervical cancer. Methods and materials The proposed model underwent repeated refining through progressive training until the training samples increased from initial 25 prior plans up to 100 cases. The estimated DVHs derived from the prediction models of different runs of training were compared in 35 new cervical cancer patients to analyze the effect of such an interactive plan and model evolution method. The reliability and efficiency of knowledge-based planning (KBP) using this highly refined model in improving the consistency and quality of the VMAT plans were also evaluated. Results The prediction ability was reinforced with the increased number of refinements in terms of normal tissue sparing. With enhanced prediction accuracy, more than 60% of automatic plan-6 (AP-6) plans (22/35) can be directly approved for clinical treatment without any manual revision. The plan quality scores for clinically approved plans (CPs) and manual plans (MPs) were on average 89.02 ± 4.83 and 86.48 ± 3.92 (p mean and V18 Gy for kidney (L/R), the Dmean, V30 Gy, and V40 Gy for bladder, rectum, and femoral head (L/R). Conclusion The proposed model evolution method provides a practical way for the KBP to enhance its prediction ability with minimal human intervene. This highly refined prediction model can better guide KBP in improving the consistency and quality of the VMAT plans.
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- 2021
5. Prior Attention Enhanced Convolutional Neural Network Based Automatic Segmentation of Organs at Risk for Head and Neck Cancer Radiotherapy
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Ying Sun, Zhen-Yu Qi, Yao Lu, Dongyun Huang, Peiliang Xie, Haibin Chen, Jun Wei, Lin Chang, Li Lin, and Dongmei Wu
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Artificial intelligence ,General Computer Science ,Computer science ,medicine.medical_treatment ,Feature extraction ,Image processing ,Convolutional neural network ,supervised learning ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,organ at risk ,medicine ,General Materials Science ,Segmentation ,image segmentation ,radiotherapy ,Contouring ,business.industry ,Head and neck cancer ,General Engineering ,Image segmentation ,medicine.disease ,image processing ,Radiation therapy ,030220 oncology & carcinogenesis ,lcsh:Electrical engineering. Electronics. Nuclear engineering ,Nuclear medicine ,business ,lcsh:TK1-9971 - Abstract
Aimed to automate the segmentation of organs at risk (OARs) in head and neck (H&N) cancer radiotherapy, we develop a novel Prior Attention enhanced convolutional neural Network (PANet) based Stepwise Refinement Segmentation Framework (SRSF) on full-size computed tomography (CT) images. The SRSF is built with a multiscale segmentation concept, in which OARs are segmented from coarse to fine. PANet is a pyramidal architecture with elements of inception block and prior attention. In this study, the developed PANet based SRSF is applied for OARs segmentation in H&N radiotherapy. 139 CT series and manually delineated contours of twenty-two OARs by experienced oncologists are collected from 139 H&N patients for training and evaluating the proposed PANet based SRSF. The mean testing Dice similarity coefficients (DSC) on 39 CT series range from 76.1± 8.3% (left middle ear) to 91.9± 1.4% (right mandible) for large volume OARs(mean volume >1cc) while the corresponding ranges are 63.4± 12.3%(chiasm) to 81.0± 14.1% (right lens) for small and challenging OARs(mean volume ≤1cc). Furthermore, the proposed method also achieved superior segmentations over reference methods on the MICCAI 2015 H&N dataset with mean DSC of 95.6± 0.7%, 81.3± 4.0%, 77.6± 4.5%, 77.5± 4.6%, and 69.2± 7.6%, on the mandible, left submandibular, left and right optical nerve, and chiasm, respectively. The accurate segmentation of OARs is obtained on both the self-collected testing data and public testing dataset, which implies that the proposed method can be used as a practicable and efficient tool for automated OARs contouring in the H&N cancer radiotherapy.
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- 2020
6. The E3 Ubiquitin Ligase Gene
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Chen-Xu, Liu, Ting, Yang, Hui, Zhou, Golam Jalal, Ahammed, Zhen-Yu, Qi, and Jie, Zhou
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Heavy metal cadmium (Cd) at high concentrations severely disturbs plant growth and development. The E3 ubiquitin ligase involved in protein degradation is critical for plant tolerance to abiotic stress, but the role of E3 ubiquitin ligases in Cd tolerance is largely unknown in tomato. Here, we characterized an E3 ubiquitin ligase gene
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- 2022
7. HsfA1a confers pollen thermotolerance through upregulating antioxidant capacity, protein repair, and degradation in Solanum lycopersicum L
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Dong-Ling Xie, Hua-Min Huang, Can-Yu Zhou, Chen-Xu Liu, Mukesh Kumar Kanwar, Zhen-Yu Qi, and Jie Zhou
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Genetics ,Plant Science ,Horticulture ,Biochemistry ,Biotechnology - Abstract
The heat shock transcription factors (Hsfs) play critical roles in plant responses to abiotic stresses. However, the mechanism of Hsfs in the regulation of pollen thermotolerance and their specific biological functions and signaling remain unclear. Herein, we demonstrate that HsfA1a played a key role in tomato pollen thermotolerance. Pollen thermotolerance was reduced in hsfA1a mutants but was increased by hsfA1a overexpression, based on pollen viability and germination. Analyzing the whole transcriptome by RNA-seq data, we found that HsfA1a mainly regulated the genes involved in oxidative stress protection, protein homeostasis regulation and protein modification, as well as the response to biological stress in anthers under heat stress. The accumulation of reactive oxygen species in anthers was enhanced in hsfA1a mutants but decreased in HsfA1a-overexpressing lines. Furthermore, HsfA1a bound to the promoter region of genes involved in redox regulation (Cu/Zn-SOD, GST8, and MDAR1), protein repair (HSP17.6A, HSP70-2, HSP90-2, and HSP101) and degradation (UBP5, UBP18, RPN10a, and ATG10) and regulated the expression of these genes in tomato anthers under heat stress. Our findings suggest that HsfA1a maintains pollen thermotolerance and cellular homeostasis by enhancing antioxidant capacity and protein repair and degradation, ultimately improving pollen viability and fertility.
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- 2022
8. Liquid biopsy tracking during sequential chemo-radiotherapy identifies distinct prognostic phenotypes in nasopharyngeal carcinoma
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Kuan Rui Lloyd Tan, Zhen-Yu Qi, Haitao Wang, Li Lin, Rui-Qi Liu, Jia-Wei Lv, Yue Chen, Ying Sun, Xiao-Dan Huang, Melvin L.K. Chua, Jun Ma, Lu-Lu Zhang, Yu Pei Chen, Si-Si Xu, Guan-Qun Zhou, and Fo-Ping Chen
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Adult ,Male ,0301 basic medicine ,Oncology ,Epstein-Barr Virus Infections ,Herpesvirus 4, Human ,medicine.medical_specialty ,medicine.medical_treatment ,Science ,General Physics and Astronomy ,Kaplan-Meier Estimate ,02 engineering and technology ,Article ,General Biochemistry, Genetics and Molecular Biology ,Virus ,Tumour biomarkers ,03 medical and health sciences ,Internal medicine ,hemic and lymphatic diseases ,medicine ,Humans ,Liquid biopsy ,Head and neck cancer ,lcsh:Science ,Chemotherapy ,Nasopharyngeal Carcinoma ,Multidisciplinary ,business.industry ,Liquid Biopsy ,Induction chemotherapy ,Cancer ,Nasopharyngeal Neoplasms ,Chemoradiotherapy ,General Chemistry ,Middle Aged ,Prognosis ,021001 nanoscience & nanotechnology ,medicine.disease ,Minimal residual disease ,Phenotype ,030104 developmental biology ,Nasopharyngeal carcinoma ,DNA, Viral ,Female ,lcsh:Q ,0210 nano-technology ,business - Abstract
Liquid biopsies have the utility for detecting minimal residual disease in several cancer types. Here, we investigate if liquid biopsy tracking on-treatment informs on tumour phenotypes by longitudinally quantifying circulating Epstein-barr virus (EBV) DNA copy number in 673 nasopharyngeal carcinoma patients undergoing radical induction chemotherapy (IC) and chemo-radiotherapy (CRT). We observe significant inter-patient heterogeneity in viral copy number clearance that is classifiable into eight distinct patterns based on clearance kinetics and bounce occurrence, including a substantial proportion of complete responders (≈30%) to only one IC cycle. Using a supervised statistical clustering of disease relapse risks, we further bin these eight subgroups into four prognostic phenotypes (early responders, intermediate responders, late responders, and treatment resistant) that are correlated with efficacy of chemotherapy intensity. Taken together, we show that real-time monitoring of liquid biopsy response adds prognostic information, and has the potential utility for risk-adapted treatment de-intensification/intensification in nasopharyngeal carcinoma., Liquid biopsies are emerging as a useful method for diagnosis and prognosis in cancer. Here, the authors show the prognostic value of monitoring the level of circulating Epstein-barr virus DNA throughout induction chemotherapy and chemo-radiotherapy and its potential utility for risk-adapted individualised therapy in nasopharyngeal carcinomapatients.
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- 2019
9. Risk Stratification and Individualized Chemotherapy for Elderly Patients with Locoregionally Advanced Nasopharyngeal Carcinoma
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Zhen-Yu Qi, Guan-Qun Zhou, Chen-Fei Wu, Wei-Hong Zheng, Lu-Lu Zhang, Xing-Li Yang, Jia Kou, Dan-Wan Wen, Si-Si Xu, Ying Sun, and Li Lin
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Oncology ,Chemotherapy ,medicine.medical_specialty ,Text mining ,Nasopharyngeal carcinoma ,business.industry ,medicine.medical_treatment ,Internal medicine ,Risk stratification ,Medicine ,business ,medicine.disease - Abstract
Backgroud: The optimal treatment strategy for elderly patients with locoregionally advanced nasopharyngeal carcinoma (LA-NPC) remains unclear. We aimed to develop individualized treatment strategies for such patients according to their pretreatment risk stratification and the degree of comorbidities.Methods: A total of 583 elderly LA-NPC patients diagnosed between January 2011 and January 2018 were retrospectively studied. Based on prognostic factors confirmed by multivariate analysis, we constructed a nomogram for disease-free survival (DFS). The entire cohort was then divided into two groups according to the nomogram cutoff value determined by X-tile analysis. The degree of comorbidities was assessed by Charlson Comorbidity Index (CCI). We performed subgroup analysis based on the degree of complications in the low- and high-risk groups to compare the survival outcomes of different treatment regimens using the Kaplan-Meier method and the log-rank test.Results: A nomogram for DFS was constructed with T/N classification, Epstein-Barr virus DNA and albumin. The high-risk group had significantly poorer survival compared with the low-risk group. The 3-year DFS and overall survival (OS) of the low-risk group and the high-risk group were 76.7% vs. 44.6%, 81.5% vs. 51.0% (both P 2) would not have.Conclusion: We constructed a prognostic nomogram for DFS and generated two risk groups. Combining risk stratification and degree of comorbidities can better guide individualized treatment for elderly LA-NPC patients.
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- 2021
10. Individualized elective irradiation of the clinically node-negative neck in definitive radiotherapy for head and neck squamous cell carcinoma
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Zhen-Yu Qi, Xue Jiang, Yao Lu, Li Lin, Guan-Qun Zhou, Cheng-Yang Jiao, Meng-Qiu Tian, Jia Kou, Jun Ma, and Ying Sun
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0301 basic medicine ,Cancer Research ,medicine.medical_specialty ,medicine.medical_treatment ,head and neck squamous cell carcinoma ,lcsh:RC254-282 ,elective irradiation ,Metastasis ,03 medical and health sciences ,0302 clinical medicine ,Quality of life ,medicine ,Humans ,Retrospective Studies ,neck node level ,business.industry ,Squamous Cell Carcinoma of Head and Neck ,Incidence (epidemiology) ,Cancer ,Original Articles ,medicine.disease ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Head and neck squamous-cell carcinoma ,Occult ,Radiation therapy ,stomatognathic diseases ,030104 developmental biology ,Oncology ,Head and Neck Neoplasms ,individualization ,030220 oncology & carcinogenesis ,Lymphatic Metastasis ,clinically node‐negative neck ,Quality of Life ,Original Article ,Radiology ,Lymph ,business ,Follow-Up Studies - Abstract
Background Oral cavity (OC), oropharyngeal (OP), hypopharyngeal (HP), and laryngeal (LA) squamous cell carcinoma (SCC) have a high incidence of regional lymph node metastasis (LNM). Elective irradiation for clinically node‐negative neck is routinely administered to treat lymph nodes harboring occult metastasis. However, the optimal elective irradiation schemes are still inconclusive. In this study, we aimed to establish individualized elective irradiation schemes for the ipsilateral and contralateral node‐negative neck of these four types of cancer. Methods From July 2005 to December 2018, 793 patients with OC‐SCC, 464 with OP‐SCC, 413 with HP‐SCC, and 645 with LA‐SCC were recruited retrospectively. Based on the actual incidence of LNM and the tumor characteristics, risk factors for contralateral LNM, as well as node level coverage schemes for elective irradiation, were determined using logistic regression analysis. Additionally, we developed a publicly available online tool to facilitate the widespread clinical use of these schemes. Results For the ipsilateral node‐negative neck, elective irradiation at levels I‐III for OC‐SCC and levels II‐IVa for OP‐, HP‐ and LA‐SCC are generally recommended. In addition, level VIIa should be included in patients with OP‐SCC. Multivariate analyses revealed that posterior hypopharyngeal wall and post‐cricoid region involvement were independently associated with level VIIa metastasis in HP‐SCC (all P < 0.05). For the contralateral node‐negative neck, multivariate analyses revealed that ipsilateral N2b2‐N3, tumors with body midline involvement, and degree of tumor invasion were the independent factors for contralateral LNM (all P < 0.05). In patients who require contralateral neck irradiation, levels I‐II are recommended for OC‐SCC, and additional level III is recommended for patients with ipsilateral N3 disease. Levels II‐III are recommended for OP‐, HP‐, and LA‐SCC, and additional level IVa is recommended for patients with advanced T or ipsilateral N classifications. Furthermore, additional level VIIa is recommended only for OP‐SCC with T4 and ipsilateral N3 disease. Conclusion Based on our findings, we suggest that individualized and computer‐aided elective irradiation schemes could reduce irradiation volumes in OC‐, OP‐ and HP‐SCC patients, as compared to current guidelines, and could thus positively impact the patients' quality of life after radiotherapy., Framework of individualized and computer‐aided elective neck irradiation. Firstly, we proposed individual elective neck irradiation schemes for head and neck squamous cell carcinoma. based on the actual incidence of lymph nodes metastasis and the tumor characteristics. Secondly, we developed a publicly available online tool to facilitate the widespread clinical use of these schemes. By inputting the characteristics of the primary tumor and metastatic LNs on this online tool, elective irradiation schemes for the right and left sides of the neck were recommended and delineated based on a set of CT scans.
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- 2021
11. Quantitative Comparison of Knowledge-Based and Manual Intensity Modulated Radiation Therapy Planning for Nasopharyngeal Carcinoma
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Zhen-Yu Qi, Weihao Xie, Huikuan Gu, Xiaoli Yu, Jinhan Zhu, Mingli Wang, Jiang Hu, Yixuan Wang, and Boji Liu
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Cancer Research ,Dose-volume histogram ,medicine.medical_treatment ,lcsh:RC254-282 ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Original Research ,dose volume histogram prediction model ,knowledge-based planning ,business.industry ,nasopharyngeal carcinoma ,plan quality ,Intensity-modulated radiation therapy ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,medicine.disease ,intensity modulated radiation therapy ,Radiation therapy ,Oncology ,Nasopharyngeal carcinoma ,030220 oncology & carcinogenesis ,Organ at risk ,Dose reduction ,Metric (unit) ,Nuclear medicine ,business ,Intensity modulation - Abstract
Background and purposeTo validate the feasibility and efficiency of a fully automatic knowledge-based planning (KBP) method for nasopharyngeal carcinoma (NPC) cases, with special attention to the possible way that the success rate of auto-planning can be improved.Methods and materialsA knowledge-based dose volume histogram (DVH) prediction model was developed based on 99 formerly treated NPC patients, by means of which the optimization objectives and the corresponding priorities for intensity modulation radiation therapy (IMRT) planning were automatically generated for each head and neck organ at risk (OAR). The automatic KBP method was thus evaluated in 17 new NPC cases with comparison to manual plans (MP) and expert plans (EXP) in terms of target dose coverage, conformity index (CI), homogeneity index (HI), and normal tissue protection. To quantify the plan quality, a metric was applied for plan evaluation. The variation in the plan quality and time consumption among planners was also investigated.ResultsWith comparable target dose distributions, the KBP method achieved a significant dose reduction in critical organs such as the optic chiasm (pConclusionThe automatic KBP method using the DVH prediction model provided a possible way to generate clinically acceptable plans in a short time for NPC patients.
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- 2021
12. Synthesize CT from paired MRI of the same patient with patch-based generative adversarial network
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Yan Li, Ying Sun, Zhen-Yu Qi, Yao Lu, and Jun Wei
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Dose calculation ,medicine.diagnostic_test ,Computer science ,business.industry ,Deep learning ,Magnetic resonance imaging ,Pattern recognition ,Peak signal-to-noise ratio ,medicine ,Head Cancer ,Artificial intelligence ,business ,Difference map ,Radiation treatment planning ,Generative adversarial network - Abstract
In current clinical practice, paired computed tomography (CT) providing electron density information for dose calculation and magnetic resonance imaging (MRI) providing molecular information for GTV delineation are acquired during radiation therapy planning of head cancer. Aimed to reduce repeatedly scanning procedures, we developed a patch-based deep learning approach to generate synthetic CT from paired MRI of the same patient. In this approach, 2D slices of MRI and CT would be divided into several overlap patches and sent to cycle-consistent generative adversarial network (CycleGAN) for training with a combination of multiple loss functions. For comparison, we also applied CycleGAN and pix2pix model using whole 2D slices as input. With IRB approval, a total number of 2542 paired MRI and CT images were collected in the experiment. Mean absolute error (MAE) and peak signal to noise ratio (PSNR) were used as evaluation metrics. The result showed that our proposed model performed best on both whole brain areas. We also provided the difference map between synthetic and real CT to give a visual evaluation of our proposed model.
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- 2020
13. The E3 Ubiquitin Ligase Gene Sl1 Is Critical for Cadmium Tolerance in Solanum lycopersicum L
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Chen-Xu Liu, Ting Yang, Hui Zhou, Golam Jalal Ahammed, Zhen-Yu Qi, and Jie Zhou
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heavy metal stress ,antioxidant enzymes ,Physiology ,Clinical Biochemistry ,protein degradation ,food and beverages ,Cell Biology ,tomato ,ubiquitination ,Molecular Biology ,Biochemistry - Abstract
Heavy metal cadmium (Cd) at high concentrations severely disturbs plant growth and development. The E3 ubiquitin ligase involved in protein degradation is critical for plant tolerance to abiotic stress, but the role of E3 ubiquitin ligases in Cd tolerance is largely unknown in tomato. Here, we characterized an E3 ubiquitin ligase gene Sl1, which was highly expressed in roots under Cd stress in our previous study. The subcellular localization of Sl1 revealed that it was located in plasma membranes. In vitro ubiquitination assays confirmed that Sl1 had E3 ubiquitin ligase activity. Knockout of the Sl1 gene by CRISPR/Cas9 genome editing technology reduced while its overexpression increased Cd tolerance as reflected by the changes in the actual quantum efficiency of PSII photochemistry (ΦPSII) and hydrogen peroxide (H2O2) accumulation. Cd-induced increased activities of antioxidant enzymes including superoxide dismutase (SOD), catalase (CAT), ascorbate peroxidase (APX), and glutathione reductase (GR) were compromised in sl1 mutants but were enhanced in Sl1 overexpressing lines. Furthermore, the content of Cd in both shoots and roots increased in sl1 mutants while reduced in Sl1 overexpressing plants. Gene expression assays revealed that Sl1 regulated the transcript levels of heavy metal transport-related genes to inhibit Cd accumulation. These findings demonstrate that Sl1 plays a critical role in regulating Cd tolerance by relieving oxidative stress and resisting heavy metal transportation in tomato. The study provides a new understanding of the mechanism of plant tolerance to heavy metal stress.
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- 2022
14. Magnetic resonance-based synthetic computed tomography images generated using generative adversarial networks for nasopharyngeal carcinoma radiotherapy treatment planning
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Xingwang Gao, A. Qin, Xiaowu Deng, Jingjing Miao, Meining Chen, Yinglin Peng, Huikuan Gu, S. Chen, Chong Zhao, Yimei Liu, and Zhen-Yu Qi
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Magnetic Resonance Spectroscopy ,Computer science ,medicine.medical_treatment ,Computed tomography ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Hounsfield scale ,Imrt planning ,medicine ,Image Processing, Computer-Assisted ,Humans ,Radiology, Nuclear Medicine and imaging ,Nasopharyngeal Carcinoma ,medicine.diagnostic_test ,business.industry ,Radiotherapy Planning, Computer-Assisted ,Magnetic resonance imaging ,Nasopharyngeal Neoplasms ,Radiotherapy Dosage ,Hematology ,Radiotherapy treatment planning ,medicine.disease ,Magnetic Resonance Imaging ,Radiation therapy ,Oncology ,Nasopharyngeal carcinoma ,030220 oncology & carcinogenesis ,Mr images ,Nuclear medicine ,business ,Tomography, X-Ray Computed - Abstract
Background and purpose To investigate the feasibility of synthesizing computed tomography (CT) images from magnetic resonance (MR) images using generative adversarial networks (GANs) for nasopharyngeal carcinoma (NPC) intensity-modulated radiotherapy (IMRT) planning. Materials and methods Conventional T1-weighted MR images and CT images were acquired from 173 NPC patients. The MR and CT images of 28 patients were randomly chosen as the independent tested set. The remaining images were used to build a conditional GAN (cGAN) and a cycle-consistency GAN (cycleGAN). A U-net was used as the generator in cGAN, whereas a residual-Unet was used as the generator in cycleGAN. The cGAN was trained using the deformable registered MR-CT image pairs, whereas the cycleGAN was trained using the unregistered MR and CT images. The generated synthetic CT (SCT) images from cGAN and cycleGAN were compared with the true CT images with respect to their Hounsfield Unit (HU) discrepancy and dosimetric accuracy for NPC IMRT plans. Results The mean absolute errors within the body were 69.67 ± 9.27 HU and 100.62 ± 7.39 HU for the cGAN and cycleGAN, respectively. The 2%/2-mm γ passing rates were (98.68 ± 0.94)% and (98.52 ± 1.13)% for the cGAN and cycleGAN, respectively. Meanwhile, the absolute dose discrepancies within the regions of interest were (0.49 ± 0.24)% and (0.62 ± 0.36)%, respectively. Conclusion Both cGAN and cycleGAN could swiftly generate accurate SCT volume images from MR images, with high dosimetric accuracy for NPC IMRT planning. cGAN was preferable if high-quality MR-CT image pairs were available.
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- 2019
15. Optimal cumulative cisplatin dose in nasopharyngeal carcinoma patients receiving additional induction chemotherapy
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Wen Fei Li, Guan Qun Zhou, Ling Long Tang, Ying Sun, Ai Hua Lin, Jia Wei Lv, Xiao Jun He, Lei Chen, Yan Ping Mao, Jun Ma, Yu Pei Chen, and Zhen Yu Qi
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Male ,0301 basic medicine ,Epstein-Barr Virus Infections ,Herpesvirus 4, Human ,Cancer Research ,Databases, Factual ,Gastroenterology ,0302 clinical medicine ,Nasopharyngeal Carcinoma ,Chemoradiotherapy ,General Medicine ,Middle Aged ,real world data ,Treatment Outcome ,Oncology ,030220 oncology & carcinogenesis ,Female ,Original Article ,medicine.drug ,Adult ,medicine.medical_specialty ,Antineoplastic Agents ,Subgroup analysis ,Disease-Free Survival ,Young Adult ,03 medical and health sciences ,cumulative cisplatin dose ,Clinical Research ,Internal medicine ,medicine ,Carcinoma ,Humans ,induction chemotherapy ,Aged ,Cisplatin ,Dose-Response Relationship, Drug ,intensity‐modulated radiation therapy ,business.industry ,Cancer ,Induction chemotherapy ,Nasopharyngeal Neoplasms ,Original Articles ,equipment and supplies ,medicine.disease ,Confidence interval ,030104 developmental biology ,Nasopharyngeal carcinoma ,Propensity score matching ,business - Abstract
To clarify the optimal cumulative cisplatin dose (CCD) in locoregionally‐advanced nasopharyngel carcinoma (NPC) patients receiving induction chemotherapy (IC) plus concurrent chemoradiotherapy (CCRT). Using the NPC‐specific database from the established big‐data intelligence platform at Sun Yat‐Sen University Cancer Center, 583 non‐disseminated, locoregionally‐advanced NPC patients receiving IC plus CCRT were enrolled. Propensity score matching (PSM) analysis was conducted to control for confounding factors. The median CCD was 160 mg/m2 after IC (range, 40‐300 mg/m2); only 74 patients (12.7%) achieved CCD >200 mg/m2. Patients receiving >200 mg/m2 CCD did not show significantly improved 5‐year overall survival (OS) (HR = 1.19; 95% confidence intervals [CI] 0.69‐2.06, P = .53) and progression‐free survival (PFS) (HR = 1.03; 95% CI: 0.63‐1.68, P = .92) compared with patients receiving 160 mg/m2 and CCD < 160 mg/m2 in both the original and PSM cohorts. In addition, subgroup analysis indicated a favorable PFS, but not OS, with higher cisplatin administration in patients with pretreatment Epstein–Barr virus deoxyribonucleic acid (EBV DNA)
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- 2018
16. Prognostic values of the integrated model incorporating the volume of metastatic regional cervical lymph node and pretreatment serum Epstein–Barr virus DNA copy number in predicting distant metastasis in patients with N1 nasopharyngeal carcinoma
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Ji-Jin Yao, Ya-Nan Jin, Wangjian Zhang, Si-Yang Wang, Li Li, Jun Ma, Ying Sun, Ya-Qin Wang, Fan Zhang, Zhi-Bin Cheng, Lizhi Liu, Zhen-Yu Qi, and Guan-Qun Zhou
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0301 basic medicine ,Oncology ,Male ,medicine.medical_specialty ,Epstein-Barr Virus Infections ,Herpesvirus 4, Human ,Multivariate analysis ,DNA Copy Number Variations ,Epstein–Barr virus DNA ,lcsh:RC254-282 ,Metastasis ,03 medical and health sciences ,0302 clinical medicine ,Lymph node volume ,Internal medicine ,medicine ,Nasopharyngeal carcinoma ,Humans ,Lymph node ,Survival analysis ,Neoplasm Staging ,Receiver operating characteristic ,business.industry ,Hazard ratio ,Cancer ,Nasopharyngeal Neoplasms ,medicine.disease ,Prognosis ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Survival Analysis ,030104 developmental biology ,medicine.anatomical_structure ,ROC Curve ,030220 oncology & carcinogenesis ,Lymphatic Metastasis ,DNA, Viral ,Distant metastasis ,Female ,Original Article ,business ,Prognostic model - Abstract
Background According to the 7th edition of the American Joint Committee on Cancer (AJCC) staging system, over 50% of patients with nasopharyngeal carcinoma (NPC) have N1 disease at initial diagnosis. However, patients with N1 NPC are relatively under-researched, and the metastasis risk of this group is not well-stratified. This study aimed to evaluate the prognostic values of gross tumor volume of metastatic regional lymph node (GTVnd) and pretreatment serum copy number of Epstein–Barr virus (EBV) DNA in predicting distant metastasis of patients with N1 NPC, and to develop an integrated prognostic model that incorporates GTVnd and EBV DNA copy number for this group of patients. Methods The medical records of 787 newly diagnosed patients with nonmetastatic, histologically proven N1 NPC who were treated at Sun Yat-sen University Cancer Center between November 2009 and February 2012 were analyzed. Computed tomography-derived GTVnd was measured using the summation-of-area technique. Blood samples were collected before treatment to quantify plasma EBV DNA. The receiver operating characteristic (ROC) curve analysis was used to evaluate the cut-off point for GTVnd, and the area under the ROC curve was used to assess the predicted validity of GTVnd. The survival rates were assessed by Kaplan–Meier analysis, and the survival curves were compared using a log-rank test. Multivariate analysis was conducted using the Cox proportional hazard regression model. Results The 5-year distant metastasis-free survival (DMFS) rates for patients with GTVnd > 18.9 vs. ≤ 18.9 mL were 82.2% vs. 93.2% (P 4000 vs. ≤ 4000 copies/mL were 83.5% vs. 93.9% (P 18.9 mL and EBV DNA copy number > 4000 copies/mL were significantly associated with poor prognosis (both P
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- 2017
17. Synthetic CT Generation From Multi-Sequence MR Images for Head and Neck MRI-Only Radiotherapy via Cycle-Consistent Generative Adversarial Network
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X. Deng, Jingjing Miao, Zhen Yu Qi, S. Chen, Yu Tuan Peng, Minhu Chen, S. Wu, Chong Zhao, and Yimei Liu
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Cancer Research ,Radiation ,business.industry ,Image quality ,medicine.medical_treatment ,Soft tissue ,Density estimation ,Radiation therapy ,Oncology ,Hounsfield scale ,Medicine ,Radiology, Nuclear Medicine and imaging ,Mr images ,Radiation treatment planning ,business ,Nuclear medicine ,Head and neck - Abstract
PURPOSE/OBJECTIVE(S) Synthetic CT (sCT) generation with MR image plays an essential role in MR-only radiotherapy, which can be used for electron density estimation and dose calculation in treatment planning. Currently, the reliability of deep learning-based methods for sCT generation depends on two aspects: the MR-CT registration errors, which can eliminate by a cycle-consistent generative adversarial network (CycleGAN) with unpaired training data, and the different anatomy information and contract divergence of various tissue in different sequences MRI which will significantly affect the nonlinear mapping of MR-CT. The purpose of this study is to investigate the effect of different sequence MRI by evaluating the image quality of corresponded sCTs. MATERIALS/METHODS Multi-sequence MR images (T1, T2, T1C) and plan CT images of 151 patients with nasopharyngeal carcinoma were acquired on the same day in the radiation treatment position. 126 cases were randomly selected as the training set with the same preprocessing. Three unsupervised CycleGAN-based models were respectively trained with different sequence MRI with Architecture, which consists of 2 ResUnet-based generators and 2 Patch-GAN-based discriminators. The remaining 25 CT-MR cases with non-rigid registration were selected as the independent paired testing set. The mean error (ME) and mean absolute error (MAE) between plan CT and sCT of each model were used to measure the CT value estimation accuracy, which was calculated within air (Hounsfield Unit, HU 150) and whole body, respectively. Structural similarity index (SSIM) was applied to evaluate the similarity between error (plan CT and sCT. RESULTS The MEs calculated between plan CT and T1, T2, T1C-based sCT images, were (-0.62 ± 3.06) vs. (-1.81 ± 3.13) vs. (0.13 ± 2.56) within air, (154.92 ± 87.93) vs. (173.27 ± 97.62) vs. (262.78 ± 91.74) within soft tissue, (1363.99 ± 294.94) vs. (337.21 ± 50.4) vs. (661.63 ± 168.43) within bone, (22.12 ± 29.47) vs. (17.05 ± 10.51) vs. (35.28 ± 20.75) within the whole body. The MAEs correspondingly were (4.49 ± 3.13) vs. (4.6 ± 3.47) vs. (4.6 ± 3.47) within air, (186.41 ± 61.75) vs. (197.33 ± 58.62) vs. (293.56 ± 72.72) within soft tissue, (186.41 ± 61.75) vs. (197.33 ± 58.62) vs. (293.56 ± 72.72) within bone, (31.28 ± 28.1) vs. (27.64 ± 10.41) vs. (42.6 ± 23.82) within the whole body. The quantitative analysis between T1, T2, T1C-sCTs indicates that the T1C based generated model achieves higher accuracy than the other models in nasopharyngeal carcinoma. CONCLUSION The T1C MRI can provide sufficient anatomy information and tissue contract in synthetic CT prediction of head and neck region, which offers a substantial potential for density estimation and dose calculation in radiotherapy. The generation method and evaluation will investigate synthetic CT prediction with more complex tissue in various body parts.
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- 2021
18. Development of a Nomogram Model for Treatment of Elderly Patients with Locoregionally Advanced Nasopharyngeal Carcinoma
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Si-Si Xu, Li Lin, Zhen-Yu Qi, Chen-Fei Wu, Ying Sun, Wei-Hong Zheng, Dan-Wan Wen, Xing-Li Yang, Lu-Lu Zhang, Jia Kou, and Guan-Qun Zhou
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Oncology ,medicine.medical_specialty ,Receiver operating characteristic ,Proportional hazards model ,business.industry ,nasopharyngeal carcinoma ,medicine.medical_treatment ,Area under the curve ,Medicine (miscellaneous) ,Nomogram ,elderly patients ,comorbidities ,chemotherapy ,medicine.disease ,Comorbidity ,Article ,Radiation therapy ,Nasopharyngeal carcinoma ,Internal medicine ,Cohort ,medicine ,Medicine ,business - Abstract
(1) Purpose: This study aims to explore risk-adapted treatment for elderly patients with locoregionally advanced nasopharyngeal carcinoma (LA-NPC) according to their pretreatment risk stratification and the degree of comorbidity. (2) Methods: A total of 583 elderly LA-NPC patients diagnosed from January 2011 to January 2018 are retrospectively studied. A nomogram for disease-free survival (DFS) is constructed based on multivariate Cox regression analysis. The performance of the model is evaluated by using the area under the curve (AUC) of the receiver operating characteristic curve and Harrell concordance index (C-index). Then, the entire cohort is divided into different risk groups according to the nomogram cutoff value determined by X-tile analysis. The degree of comorbidities is assessed by the Charlson Comorbidity Index (CCI). Finally, survival rates are estimated and compared by the Kaplan–Meier method and the log-rank test. (3) Results: A nomogram for DFS is constructed with T/N classification, Epstein-Barr virus DNA and albumin. The nomogram shows well prognostic performance and significantly outperformed the tumor-node-metastasis staging system for estimating DFS (AUC, 0.710 vs. 0.607, C-index, 0.668 vs. 0.585, both p <, 0.001). The high-risk group generated by nomogram has significantly poorer survival compared with the low-risk group (3-year DFS, 76.7% vs. 44.6%, p <, 0.001). For high-risk patients with fewer comorbidities (CCI = 2), chemotherapy combined with radiotherapy is associated with significantly better survival (p <, 0.05) than radiotherapy alone. (4) Conclusion: A prognostic nomogram for DFS is constructed with generating two risk groups. Combining risk stratification and the degree of comorbidities can guide risk-adapted treatment for elderly LA-NPC patients.
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- 2021
19. Combined prognostic value of pretreatment anemia and cervical node necrosis in patients with nasopharyngeal carcinoma receiving intensity-modulated radiotherapy: A large-scale retrospective study
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Lu-Lu Zhang, Yi Yang Li, Yan Ping Mao, Jun Ma, Guan Qun Zhou, Ying Sun, Ai Hua Lin, Ling Long Tang, and Zhen Yu Qi
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Male ,Oncology ,Cancer Research ,Time Factors ,Multivariate analysis ,Necrosis ,medicine.medical_treatment ,Kaplan-Meier Estimate ,Radiation Tolerance ,030218 nuclear medicine & medical imaging ,0302 clinical medicine ,Risk Factors ,Original Research ,Nasopharyngeal Carcinoma ,Anemia ,Middle Aged ,cervical node necrosis ,Treatment Outcome ,030220 oncology & carcinogenesis ,Disease Progression ,Female ,medicine.symptom ,Adult ,medicine.medical_specialty ,Adolescent ,Risk Assessment ,survival ,Disease-Free Survival ,Young Adult ,03 medical and health sciences ,Internal medicine ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Aged ,Neoplasm Staging ,Proportional Hazards Models ,Retrospective Studies ,Chemotherapy ,Chi-Square Distribution ,Proportional hazards model ,business.industry ,Carcinoma ,Clinical Cancer Research ,Nasopharyngeal Neoplasms ,Retrospective cohort study ,medicine.disease ,Radiation therapy ,Nasopharyngeal carcinoma ,Multivariate Analysis ,Lymph Nodes ,Radiotherapy, Intensity-Modulated ,Neoplasm Recurrence, Local ,business - Abstract
This study investigated the combined prognostic value of pretreatment anemia and cervical node necrosis (CNN) in patients with nasopharyngeal carcinoma (NPC). Retrospective review of 1302 patients with newly diagnosed nonmetastatic NPC treated with intensity‐modulated radiotherapy (IMRT) ± chemotherapy. Patients were classified into four groups according to anemia and CNN status. Survival was compared using the log‐rank test. Independent prognostic factors were identified using the Cox proportional hazards model. The primary end‐point was overall survival (OS); secondary end‐points were disease‐free survival (DFS), locoregional relapse‐free survival (LRRFS), and distant metastasis‐free survival (DMFS). Pretreatment anemia was an independent, adverse prognostic factor for DMFS; pretreatment CNN was an independent adverse prognostic factor for all end‐points. Five‐year survival for non‐anemia and non‐CNN, anemia, CNN, and anemia and CNN groups were: OS (93.1%, 87.2%, 82.9%, 76.3%, P
- Published
- 2017
20. Induction Chemotherapy Has No Prognostic Value in Patients with Locoregionally Advanced Nasopharyngeal Carcinoma and Chronic Hepatitis B Infection in the IMRT Era
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Guan Qun Zhou, Ying Sun, Ai Hua Lin, Jun Ma, Yang Chan Li, Zhen Yu Qi, and Lu-Lu Zhang
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Oncology ,Original article ,Cancer Research ,medicine.medical_specialty ,medicine.medical_treatment ,Subgroup analysis ,lcsh:RC254-282 ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,medicine ,Stage (cooking) ,business.industry ,Proportional hazards model ,Incidence (epidemiology) ,Induction chemotherapy ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,medicine.disease ,Surgery ,Radiation therapy ,Nasopharyngeal carcinoma ,030220 oncology & carcinogenesis ,Propensity score matching ,030211 gastroenterology & hepatology ,business - Abstract
BACKGROUND: The effectiveness of induction chemotherapy (IC) followed by concurrent chemoradiotherapy (CCRT) over CCRT alone in patients with locoregionally advanced nasopharyngeal carcinoma (NPC) and chronic hepatitis B infection in the intensity-modulated radiotherapy (IMRT) era is unknown. PATIENTS AND METHODS: A total of 249 patients with stage T1-2 N2-3 or T3-4 N1-3 NPC and chronic hepatitis B infection treated with IMRT were retrospectively reviewed. Propensity score matching (PSM) was employed to balance covariates; 140 patients were propensity-matched (1:1 basis). Survival outcomes in the IC+CCRT and CCRT groups were compared using the Kaplan–Meier method, log-rank test and Cox proportional hazards model. RESULTS : No significant survival differences were observed between IC+CCRT and CCRT (5-year overall survival, 88.3% vs. 82.2%; P =.484; disease-free survival, 73.9% vs. 75.2%; P =.643; distant metastasis-free survival, 84.1% vs. 85.1%; P =.781; and locoregional failure-free survival, 87.9% vs. 85.1%; P =.834). After adjusting for known prognostic factors in multivariate analysis, IC was not an independent prognostic factor for any outcome (all P >.05); subgroup analysis based on T category (T1-2/T3-4), N category (N0-1/N2-3), and overall stage (III/IV) confirmed these results. The incidence of hepatic function damage in the IC+CCRT and CCRT groups was not significantly different. CONCLUSION : IC+CCRT leads to comparable survival outcomes and hepatic function damage compared to CCRT alone in patients with locoregionally advanced NPC with chronic hepatitis B infection in the IMRT era. Further investigations are warranted.
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- 2017
21. Influence of Cervical Node Necrosis of Different Grades on the Prognosis of Nasopharyngeal Carcinoma Patients Treated with Intensity-Modulated Radiotherapy
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Guan Qun Zhou, Zhen Yu Qi, Jia Xiang Li, Lu-Lu Zhang, Ling Long Tang, Ying Sun, Ai Hua Lin, and Jun Ma
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Oncology ,medicine.medical_specialty ,Necrosis ,Node metastasis ,medicine.medical_treatment ,Prognosis ,Cervical Node necrosis ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,medicine ,In patient ,Intensity-Modulated Radiation Therapy ,Nasopharyngeal Carcinoma ,medicine.diagnostic_test ,business.industry ,Magnetic resonance imaging ,medicine.disease ,Predictive factor ,Radiation therapy ,stomatognathic diseases ,Nasopharyngeal carcinoma ,030220 oncology & carcinogenesis ,Radiology ,Intensity modulated radiotherapy ,medicine.symptom ,business ,Research Paper - Abstract
Background: To analyze the prognostic value of cervical node necrosis (CNN) observed on pretreatment magnetic resonance imaging (MRI) in patients with nasopharyngeal carcinoma (NPC) treated with intensity-modulated radiotherapy (IMRT). Patients and Methods: The medical records of 1423 NPC patients with cervical node metastasis who underwent IMRT were retrospectively reviewed. Lymph nodes in the axial plane of pretreatment MRI were classified as follows: grade 0 CNN, no hypodense zones; grade 1 CNN, ≤33% areas showing hypodense zones; and grade 2, >33% areas showing hypodense zones. Results: CNN was detectable in 470/1423 (33%) patients. Of these 470 patients, 213 (15%) and 257 (18%) exhibited grade 1 and grade 2 CNN. The grade 0 and grade 1 CNN groups showed significant differences with regard to distant metastasis-free survival (DMFS), but not overall survival (OS), regional relapse-free survival (RRFS), local relapse-free survival (LRFS), and disease-free survival (DFS). Significant differences were observed among the grade 0 and grade 2 CNN groups with regard to OS, RRFS, LRFS, DMFS, and DFS. Moreover, OS, LRFS, RRFS, and DFS were significantly different between the grade 1 and grade 2 CNN groups, whereas DMFS showed no significant differences. Univariate and multivariate analyses revealed CNN on MRI as a significant negative prognostic factor for OS, LRFS, RRFS, DMFS, and DFS in NPC patients. Conclusions: NPC patients with CNN of different grades show various prognosis and failure patterns after IMRT. CNN on MRI can be adopted as a predictive factor for formulating individualized treatment plans for NPC patients.
- Published
- 2017
22. Evolution and Dosimetric Analysis of Magnetic Resonance Imaging-Detected Brain Stem Injury After Intensity Modulated Radiation Therapy in Nasopharyngeal Carcinoma
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Yang-Chan Li, Xiao-Dan Huang, Jia Kou, Zhen-Yu Qi, Wen-Jun He, Wei-Hong Zheng, Wei-Dong Zhang, Jiang Hu, Li Lin, Ying Sun, Lu-Lu Zhang, Guan-Qun Zhou, Fo-Ping Chen, and Jun Ma
- Subjects
Adult ,Male ,Cancer Research ,medicine.medical_specialty ,medicine.medical_treatment ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Text mining ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Radiation Injuries ,Radiometry ,Retrospective Studies ,Radiation ,Nasopharyngeal Carcinoma ,medicine.diagnostic_test ,Receiver operating characteristic ,business.industry ,Magnetic resonance imaging ,Retrospective cohort study ,Nasopharyngeal Neoplasms ,Radiotherapy Dosage ,Odds ratio ,Intensity-modulated radiation therapy ,Middle Aged ,medicine.disease ,Magnetic Resonance Imaging ,Radiation therapy ,Oncology ,Nasopharyngeal carcinoma ,ROC Curve ,030220 oncology & carcinogenesis ,Female ,Radiology ,Radiotherapy, Intensity-Modulated ,business ,human activities ,Brain Stem ,Follow-Up Studies - Abstract
Purpose To evaluate the evolution of radiation-induced brain stem injury (BSI) in patients with nasopharyngeal carcinoma (NPC) treated with intensity modulated radiation therapy (IMRT) and to identify the critical dosimetric predictors of BSI. Methods and Materials A total of 6288 NPC patients treated with IMRT between 2009 and 2015 were retrospectively reviewed. Among these 6288 patients, 24 had radiation-induced BSI, which manifested as edematous lesions and contrast-enhanced lesions (CLs) on magnetic resonance imaging. Latency, symptoms, and evolution of BSI were assessed. Critical dosimetric predictors of BSI were identified using a penalized regression model with performance evaluated by receiver operating characteristic curve analysis. Results Median BSI latency was 14.5 months (range, 7.6-37.5 months), and 9 out of 24 patients (37.5%) were clinically symptomatic. Edematous lesions and CLs were both present in all patients. Necrosis was significantly more common in larger CLs (P = .007). After median follow-up of 12.5 months, 13 out of 24 patients (54.2%) had complete remission, and 5 out of 24 patients (20.8%) had partial remission. Remission was unaffected by whether or not symptomatic treatment was given. Maximum point dose (Dmax) was identified as the critical predictor of BSI (area under the receiver operating curve = 0.898), with the optimal cutoff equivalent dose in 2-Gy fractions (D2) being 67.4 Gy (sensitivity = 0.833, 20 out of 24; specificity = 0.835, 5234 out of 6264). Patients with Dmax ≥67.4 Gy (D2) were significantly more likely to develop BSI (odds ratio = 25.29; 95% CI, 8.63-74.14; P Conclusions In patients with NPC treated with IMRT, BSI generally tends to improve over time. Dmax = 67.4 Gy (D2) appears to be the dose constraint for brain stem, potentially providing clinicians with greater choice and flexibility when balancing the tumor target coverage and brain stem protection. Further studies are needed to validate our findings.
- Published
- 2019
23. Contemporary Update on Prognostic Nomograms for Endemic Nasopharyngeal Carcinoma: Real-World Results from a Big-Data Intelligence Platform-Based Analysis
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Lizhi Liu, Fan Zhang, Qiao-Dan Liu, Guan-Qun Zhou, Jun-Jie Mao, Jun Ma, Wei Wei, Zhigang Liu, Wangjian Zhang, Siyang Wang, Ying Sun, Wayne R. Lawrence, Li Li, Tian-Sheng Gao, Ji-Jin Yao, Zhen-Yu Qi, Li Lin, and Hong Shan
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medicine.medical_specialty ,business.industry ,Retrospective cohort study ,Nomogram ,medicine.disease ,Nasopharyngeal carcinoma ,Informed consent ,Internal medicine ,Cohort ,medicine ,Clinical endpoint ,T-stage ,Internal validation ,business - Abstract
Background: To investigate the survival outcomes and update effective prognostic nomograms of nasopharyngeal carcinoma (NPC) in an endemic area. Methods: A retrospective cohort of 10126 patients who underwent radical intensity-modulated radiotherapy (IMRT) at Sun Yat-sen University Cancer Center (SYSUCC) from April 2009 to December 2015. We assigned patients into a training cohort (SYSUCC-A; n=6751) and an internal validation cohort (SYSUCC-B; n=3375) based on computer-generated random numbers. Patients collected from Wuzhou Red Cross Hospital (WZRCH) between February 2012 and July 2015 were used as the independent external validation cohort (WZRCH; n=450). Concordance index (C-index) was used to determine predictive accuracy and discriminative ability of the nomogram. Overall survival (OS) was the primary endpoint. Secondary endpoints consisted of local relapse-free survival (LRFS), regional relapse-free survival (RRFS), distant metastasis-free survival (DMFS), and disease-free survival (DFS). All statistical tests were two-sided. Findings: The three- and five-year OS, LRFS, RRFS, DMFS, and DFS rates were 92.3% and 86.5%, 95.4% and 93.4%, 96.0% and 94.3%, 89.5% and 87.0%, and 83.4% and 78.4%, respectively. Gender, age, T stage, and N stage were identified independent risk factors that predicted OS, which were all assembled into the nomogram and derived from multivariable analysis of the SYSUCC-A cohort. The nomogram c-index for OS was 0.725 (95% CI, 0.679-0.772). Calibration curve for probability of death revealed the nomogram-based predictions were in good agreement with actual observations. C-index of the nomograms for LRFS, RRFS, DMFS, and DFS were 0.684 (95% CI, 0.611-0.756), 0.650 (95% CI, 0.571-0.728), 0.680 (95% CI, 0.630-0.731), and 0.669 (95% CI, 0.629-0.710), respectively. All results were confirmed in the validation cohorts. Interpretation: Patients with NPC had satisfactory locoregional survival outcomes undergoing IMRT in an endemic area, and distant metastasis predominates as the pattern of disease relapse. These validated nomograms could serve as useful tool for predicting survival outcomes and providing patient counseling. Funding Statement: This work was supported by the Special Support Program of Sun Yat-sen University Cancer Center (16zxtzlc06), the Health & Medical Collaborative Innovation Project of Guangzhou City, China (201604020003), the Natural Science Foundation of Guang Dong Province (No. 2017A030312003), Health & Medical Collaborative Innovation Project of Guangzhou City, China (201803040003), the Innovation Team Development Plan of the Ministry of Education (No. IRT_17R110), the Overseas Expertise Introduction Project for Discipline Innovation (111 Project, B14035) and the National Natural Science Foundation of China (No. 81802707). Declaration of Interests: The authors declare no potential conflicts of interest. Ethics Approval Statement: All patients provided informed consent, and consent waiver for the rest of the cohort was approved by the respective ethical review boards. Patients’ clinical and demographic information were anonymized before analysis.
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- 2019
24. Genome-wide identification of lncRNAs and mRNAs differentially expressed in non-functioning pituitary adenoma and construction of an lncRNA-mRNA co-expression network
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Wei Zhang, Guo-Zhen Hui, Yao Li, Nan Zhang, Minyan Qiu, Qi Fang, Zhen-Yu Qi, Weikang Xing, and Cheng Huang
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0301 basic medicine ,Microarray ,QH301-705.5 ,Science ,Computational biology ,Biology ,medicine.disease_cause ,Genome ,General Biochemistry, Genetics and Molecular Biology ,Formalin-fixed and paraffin-embedded tissues ,03 medical and health sciences ,0302 clinical medicine ,Non-functioning pituitary adenomas ,medicine ,KEGG ,Biology (General) ,Messenger RNA ,Co-expression network ,Mechanism (biology) ,Long non-coding RNA ,Reverse transcription polymerase chain reaction ,030104 developmental biology ,030220 oncology & carcinogenesis ,Tumorigenesis ,General Agricultural and Biological Sciences ,Carcinogenesis ,Research Article - Abstract
The involvement of long non-coding RNAs (lncRNAs) during tumorigenesis is a recent emerging theme. Yet no systematic evaluation of lncRNAs has been previously reported for non-functioning pituitary adenoma (NFPA), a fairly common type of intracranial tumor. Here, we report the first genome-wide expression profile for lncRNAs and mRNAs in NFPA, using formalin-fixed and paraffin-embedded tissue specimens. Using microarray analyses, we identified 113 lncRNAs and 80 mRNAs differentially expressed in NFPA; this list includes lncRNAs previously implicated in a variety of cancers. Using real-time quantitative reverse transcription polymerase chain reaction (qRT-PCR) we further confirmed differential expression in NFPA for ten of the 113 lncRNAs. Using these ten doubly confirmed lncRNAs, we constructed an lncRNA-mRNA co-expression network comprising of 130 specific lncRNA-mRNA co-expression relationships. In addition, we conducted GO and KEGG analyses for the 80 mRNAs differentially expressed in NFPA. Our microarray and qRT-PCR analyses provided a working list of lncRNAs that may be functionally relevant to NFPA tumorigenesis. Our co-expression network in turn connected these largely uncharacterized lncRNAs to specific mRNAs, whose roles we further elucidated via GO and KEGG analyses, thus providing specific, testable hypotheses for the functions of these lncRNAs. Together, our study laid the foundation for future investigation of the specific function and mechanism by which lncRNAs are involved in NFPA tumorigenesis., Summary statement: We identified long non-coding RNAs and mRNAs differentially expressed in non-functioning pituitary adenomas via microarray analyses, and provided working hypotheses for how these RNAs may function via co-expression network analyses.
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- 2019
25. Characteristics of Superficial Dose for the High Field MR-Linac: Measurements and Calculations
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Y.X. Li, Bo Wang, S. Ding, X. Deng, Huanliang Liu, X. Huang, and Zhen Yu Qi
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High field mr ,Cancer Research ,Radiation ,Nuclear magnetic resonance ,Oncology ,business.industry ,Medicine ,Radiology, Nuclear Medicine and imaging ,business ,Linear particle accelerator - Published
- 2020
26. MR-based Synthetic CT Images Generated Using Generative Adversarial Networks for Nasopharyngeal Carcinoma Radiotherapy Treatment Planning
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Yu Tuan Peng, Xiang Gao, Jingjing Miao, Chong Zhao, X. Deng, H. Gu, Zhen Yu Qi, Yu Wang, S. Chen, Q. An, Minhu Chen, and Yimei Liu
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Cancer Research ,Adversarial system ,medicine.medical_specialty ,Radiation ,Oncology ,Nasopharyngeal carcinoma ,business.industry ,Medicine ,Radiology, Nuclear Medicine and imaging ,Radiology ,Radiotherapy treatment planning ,business ,medicine.disease - Published
- 2020
27. Clinical features and survival outcomes between ascending and descending types of nasopharyngeal carcinoma in the intensity-modulated radiotherapy era: A big-data intelligence platform-based analysis
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Feng-Ting Zhu, Zhen-Yu Qi, Guan-Qun Zhou, Xi-Wei Xu, Wangjian Zhang, Zhigang Liu, Shao-Yi Chen, Wayne R. Lawrence, Ying Sun, Ji-Jin Yao, Jun Ma, and Guan-Min Jiang
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Oncology ,Adult ,Big Data ,Male ,medicine.medical_specialty ,Multivariate analysis ,medicine.medical_treatment ,Kaplan-Meier Estimate ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Stage (cooking) ,Lymph node ,Survival analysis ,Neoplasm Staging ,Proportional Hazards Models ,Retrospective Studies ,Nasopharyngeal Carcinoma ,business.industry ,Hazard ratio ,Cancer ,Nasopharyngeal Neoplasms ,Hematology ,Middle Aged ,medicine.disease ,Radiation therapy ,Survival Rate ,medicine.anatomical_structure ,Nasopharyngeal carcinoma ,030220 oncology & carcinogenesis ,Multivariate Analysis ,Female ,Radiotherapy, Intensity-Modulated ,Neoplasm Recurrence, Local ,business - Abstract
PURPOSE To compare clinical features and survival outcomes in patients with ascending type (type A) and descending type (type D) nasopharyngeal carcinoma (NPC) in the intensity-modulated radiotherapy (IMRT) era. MATERIALS AND METHODS A total of 5194 patients with type A and type D NPC treated at Sun Yat-sen University Cancer Center were randomly selected. Tumors that were mainly advanced local disease (T3-4 stage) with early stage cervical lymph node involvement (N0-1 stage) were determined as type A, while tumors with advanced lymph node disease (N2-3 stage) but early stage local invasion (T1-2 stage) were classified as type D NPC. Kaplan-Meier's analysis was used to evaluate survival rates, and log-rank test survival curves were used for comparison. In the multivariate analysis Cox proportional hazard models were developed. RESULTS There was a larger proportion of type A tumors (82%) than type D tumors (18%). Compared to patients with type A tumors, those with type D tumors had increased likelihood of distant metastasis, regional recurrence, disease recurrence, and death (P
- Published
- 2018
28. Risk Assessment of Secondary Primary Malignancies in Nasopharyngeal Carcinoma: A Big-Data Intelligence Platform-Based Analysis of 6,377 Long-term Survivors from an Endemic Area Treated with Intensity-Modulated Radiation Therapy during 2003-2013
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Guo Hong Li, Lu-Lu Zhang, Yi Yang Li, Zhen-Yu Qi, Ying Sun, and Ai Hua Lin
- Subjects
0301 basic medicine ,Big Data ,Male ,Cancer Research ,Secondary ,Endemic Diseases ,medicine.medical_treatment ,Kaplan-Meier Estimate ,0302 clinical medicine ,Cancer Survivors ,Cumulative incidence ,Aged, 80 and over ,Nasopharyngeal Carcinoma ,Incidence ,Neoplasms, Second Primary ,Middle Aged ,Oncology ,030220 oncology & carcinogenesis ,Female ,Original Article ,Risk assessment ,Adult ,medicine.medical_specialty ,China ,Intensity-modulated radiation therapy ,Adolescent ,Risk Assessment ,03 medical and health sciences ,Young Adult ,Internal medicine ,medicine ,Carcinoma ,Humans ,Lung cancer ,Aged ,Retrospective Studies ,business.industry ,Proportional hazards model ,Malignancy ,Nasopharyngeal Neoplasms ,medicine.disease ,Survival Analysis ,Radiation therapy ,030104 developmental biology ,Nasopharyngeal carcinoma ,Risk factors ,Multivariate Analysis ,Radiotherapy, Intensity-Modulated ,business ,Complication ,Nasopharyngeal - Abstract
PURPOSE The incidence, risk factors and survival impact of secondary primary malignancies (SPMs) among survivors of nasopharyngeal carcinoma (NPC) treated with definitive intensity-modulated radiation therapy (IMRT) with or without chemotherapy are poorly characterized. METHODS AND MATERIALS Consecutive patients (n=6,377) from the big-data intelligence platform at Sun Yat-sen University Cancer Center, China (in a high-incidence area) with newly diagnosed non-metastatic pathologically proven non-keratinizing undifferentiated NPC treated with IMRT±chemotherapy between January 2003 and June 2013 were retrospectively analyzed. Cumulative incidence of SPMs was calculated using the Kaplan-Meier method. Cox proportional hazards model was used to identify potential risk factors for SPMs and assess whether SPMs affect overall survival. RESULTS Of the 6,377 patients, 189 (3.0%) suffered SPMs (median follow-up, 62 months). One-, 2-, 3-, 4-, and 5-cumulative risks of SPMs were 0.4%, 0.9%, 1.6%, 2.2%, and 2.6%, respectively. Latency from start of IMRT to SPMs diagnosis was 37 months (range, 6 to 102 months). In patients with SPMs, 14.3% suffered SPMs within 1 year post-IMRT: 1-3 years, 38.1%; 3-5 years, 33.9%; and >5 years, 13.7%. Lung cancer was the most common SPM (50/6,377, 0.78%). Multivariate analysis demonstrated sex (male, 64% increase), age (≥50 years, 68% increase), and smoking history (41% increase) were significant risk factors for SPMs, and SPMs were associated with poorer overall survival. CONCLUSION This large cohort study confirms SPMs a dreadful complication for long-term survivors of NPC treated with IMRT. SPMs negatively impact overall survival in NPC. Close follow-up is recommended for older male survivors with a smoking history.
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- 2018
29. Multi-subject atlas-based auto-segmentation reduces interobserver variation and improves dosimetric parameter consistency for organs at risk in nasopharyngeal carcinoma: A multi-institution clinical study
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Wei Ren, Guang Shun Zhang, Jianji Pan, Stewart Y. Tung, Jason Chia-Hsien Cheng, Di Yan, Chang Juan Tao, Jun Lin Yi, Jun Ma, Shao Jun Lin, Lin Kong, Ying Sun, Jiang Hu, Nian Yong Chen, Zhen Yu Qi, and Jia De Lu
- Subjects
Organs at Risk ,Clinical study ,Consistency (statistics) ,Atlas (anatomy) ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Cervical Atlas ,Radiometry ,Neoplasm Staging ,Observer Variation ,Contouring ,Nasopharyngeal Carcinoma ,business.industry ,Auto segmentation ,Radiotherapy Planning, Computer-Assisted ,Carcinoma ,Isocenter ,Nasopharyngeal Neoplasms ,Hematology ,medicine.disease ,Radiography ,medicine.anatomical_structure ,Spinal Cord ,Oncology ,Nasopharyngeal carcinoma ,Interobserver Variation ,business ,Nuclear medicine ,Brain Stem - Abstract
To assess whether consensus guideline-based atlas-based auto-segmentation (ABAS) reduces interobserver variation and improves dosimetric parameter consistency for organs at risk (OARs) in nasopharyngeal carcinoma (NPC).Eight radiation oncologists from 8 institutes contoured 20 OARs on planning CT images of 16 patients via manual contouring and manually-edited ABAS contouring. Interobserver variation [volume coefficient of variation (CV), Dice similarity coefficient (DSC), three-dimensional isocenter difference (3D-ICD)] and dosimetric parameters were compared between the two methods of contouring for each OAR.Interobserver variation was significant for all OARs in manual contouring, resulting in significant dosimetric parameter variation (P0.05). Edited ABAS significantly improved multiple metrics and reduced dosimetric parameter variation for most OARs; brainstem, spinal cord, cochleae, temporomandibular joint (TMJ), larynx and pharyngeal constrictor muscle (PCM) obtained most benefit (range of mean DSC, volume CV and main ICD values was 0.36-0.83, 12.1-84.3%, 2.2-5.0mm for manual contouring and 0.42-0.86, 7.2-70.6%, 1.2-3.5mm for edited ABAS contouring, respectively; range of dose CV reduction: 1.0-3.0%).Substantial objective interobserver differences occur during manual contouring, resulting in significant dosimetric parameter variation. Edited ABAS reduced interobserver variation and improved dosimetric parameter consistency, particularly for brainstem, spinal cord, cochleae, TMJ, larynx and PCM.
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- 2015
30. Patient- and treatment-related risk factors associated with neck muscle spasm in nasopharyngeal carcinoma patients after intensity-modulated radiotherapy
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Xiao Jun He, Ying Sun, Ai Hua Lin, Guan Qun Zhou, Jun Ma, Jia Xiang Li, Lu-Lu Zhang, Ling Long Tang, Zhen Yu Qi, and Yan Ping Mao
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Adult ,Male ,Spasm ,Cancer Research ,medicine.medical_specialty ,Prognostic variable ,Intensity-modulated radiotherapy ,medicine.medical_treatment ,Nasopharyngeal neoplasm ,lcsh:RC254-282 ,030218 nuclear medicine & medical imaging ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,Neck Muscles ,Risk Factors ,Nasopharyngeal carcinoma ,otorhinolaryngologic diseases ,Genetics ,medicine ,Carcinoma ,Clinical endpoint ,Humans ,Young adult ,Neoplasm Staging ,business.industry ,Incidence ,Incidence (epidemiology) ,Neck muscle spasm ,Dose tolerance ,Nasopharyngeal Neoplasms ,Radiotherapy Dosage ,Middle Aged ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,medicine.disease ,Surgery ,Radiation therapy ,stomatognathic diseases ,ROC Curve ,Oncology ,030220 oncology & carcinogenesis ,Female ,Radiotherapy, Intensity-Modulated ,business ,Research Article - Abstract
Background To evaluate the incidence of neck muscle spasm in nasopharyngeal carcinoma (NPC) patients that received intensity-modulated radiotherapy (IMRT), and to analyse the patient- and treatment-related risk factors associated with neck muscle spasm. Methods A sample of 152 IMRT-treated, biopsy-proven, nondisseminated NPC patients were retrospectively analysed. All had documented IMRT treatment plans and had returned for follow-up review at 4 years post-radiotherapy. Spasm of the sternocleidomastoid (SCM) muscle was graded from 0 to 3 (absent to severe) and this grade served as the clinical endpoint. Risk factors were identified using logistic regression analysis. Results Within 4 years of radiotherapy, neck muscle spasm developed in 23.68% of the patients; Grades 0, 1, 2 and 3 were respectively assigned to 83.55, 7.57, 6.58 and 2.30% of assessed SCMs. Multivariate analysis indicated that gender, N stage, V60 (percentage of SCM volume that received >60 Gy) were independent prognostic variables, and that the optimal threshold for using V60 to predict neck muscle spasm was 61.92% (sensitivity = 0.900, specificity = 0.953). Conclusions Gender, N stage and V60 were independent predictive factors for post-radiotherapy neck muscle spasm, and a V60 of ≤61.92% in the SCM was relatively safe.
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- 2017
31. Delineation of Neck Clinical Target Volume Specific to Nasopharyngeal Carcinoma Based on Lymph Node Distribution and the International Consensus Guidelines
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Yao Lu, Zhen Yu Qi, Sha Yu, Jiang Hu, Li Lin, Xiao Ju Wang, Ying Sun, Hui Chen, Jun Ma, Jiao Tian, Guan Qun Zhou, and Lu-Lu Zhang
- Subjects
Oncology ,Adult ,Male ,Cancer Research ,medicine.medical_specialty ,Consensus ,Planning target volume ,Computed tomography ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,X ray computed ,Internal medicine ,medicine ,Distribution (pharmacology) ,Humans ,Radiology, Nuclear Medicine and imaging ,Radiation treatment planning ,Lymph node ,Aged ,Radiation ,Nasopharyngeal Carcinoma ,medicine.diagnostic_test ,business.industry ,Radiotherapy Planning, Computer-Assisted ,Lymphography ,Nasopharyngeal Neoplasms ,Middle Aged ,medicine.disease ,medicine.anatomical_structure ,Nasopharyngeal carcinoma ,030220 oncology & carcinogenesis ,Practice Guidelines as Topic ,Female ,Radiology ,Lymph Nodes ,business ,Tomography, X-Ray Computed ,Neck - Abstract
Purpose To establish the regional lymph node (LN) distribution probability map and draw the neck clinical target volume specific to nasopharyngeal carcinoma (NPC). Methods and Materials One thousand patients with pathologically proven NPC were enrolled from January 2010 to December 2011. The center point of the LNs with a minimal axial diameter of ≥4 mm was marked on a single treatment planning computed tomography scan. The neck LN levels I to X using the 2013 updated international consensus guidelines were also contoured. LN distribution probability maps and distribution curves were established. The relationships between the LN distribution and consensus guidelines were analyzed to propose modifications for clinical target volume boundaries specific to NPC. Results A total of 10,651 LNs from 959 patients were marked. Based on the distribution of LNs and consensus guidelines, most of the LN levels defined in the 2013 updated consensus guidelines were confirmed to be comprehensive and applicable for NPC. However, for level Vb, 13.3% of cases (11 of 83) had LNs beyond the posteromedial border. For level VIIa (retropharyngeal LN), 1.5% of cases (12 of 819) had LNs above the cranial boundary, and 5 cases had LNs that emerged in the medial group. Moreover, we confirmed that no LN had been detected in certain areas of levels Ib, II, IVa, and Vc. Accordingly, a new level VIIc was proposed to include the medial group of retropharyngeal LNs, moderately extended boundaries for levels Vb and VIIa were recommended, and reduced boundaries are possibly adaptable for levels Ib, II, IV, and Vc. Conclusions Most LN levels in the 2013 updated consensus guidelines are comprehensive and applicable for NPC. We have proposed a new level VIIc to include a medial group of retropharyngeal LNs, recommended moderate extended boundaries for levels Vb and VIIa, and suggested that the boundaries for levels Ib, II, IV, and Vc might be reduced.
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- 2017
32. Proposal of a Pretreatment Nomogram for Predicting Local Recurrence after Intensity-Modulated Radiation Therapy in T4 Nasopharyngeal Carcinoma: A Retrospective Review of 415 Chinese Patients
- Author
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Guan Qun Zhou, Ying Sun, Ai Hua Lin, Jun Ma, Wen Fei Li, Jiang Hu, Lu-Lu Zhang, Lei Chen, Yi Yang Li, and Zhen-Yu Qi
- Subjects
0301 basic medicine ,Oncology ,Adult ,Male ,Cancer Research ,medicine.medical_specialty ,Intensity-modulated radiation therapy ,Adolescent ,medicine.medical_treatment ,Nasopharyngeal neoplasm ,Kaplan-Meier Estimate ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Drug Therapy ,Recurrence ,Internal medicine ,otorhinolaryngologic diseases ,Medicine ,Humans ,Aged ,Neoplasm Staging ,Retrospective Studies ,Nasopharyngeal Carcinoma ,business.industry ,Cancer ,Retrospective cohort study ,Nasopharyngeal Neoplasms ,Nomogram ,Middle Aged ,medicine.disease ,Prognosis ,Confidence interval ,Radiation therapy ,Nomograms ,030104 developmental biology ,Treatment Outcome ,Nasopharyngeal carcinoma ,030220 oncology & carcinogenesis ,Regression Analysis ,Female ,Original Article ,Radiotherapy, Intensity-Modulated ,Neoplasm Recurrence, Local ,business ,Body mass index - Abstract
PURPOSE Local relapse-free survival (LRFS) differs widely among patients with T4 category nasopharyngeal carcinoma (NPC). We aimed to build a nomogram incorporating clinicopathological information to predict LRFS in T4 NPC after definitive intensity-modulated radiation therapy (IMRT). Materials and Methods Retrospective study of 415 Chinese patients with non-metastatic T4 NPC treated with definitive IMRT with or without chemotherapy at our cancer center between October 2009 and September 2013. The nomogram for LRFS at 3 and 5 years was generated based on multivariate Cox proportional hazards regression, and validated using bootstrap resampling, assessing discriminative performance using the concordance index (C-index) and determining calibration ability via calibration curves. RESULTS Five-year LRFS was 88.8%. We identified and incorporated four independent prognostic factors for LRFS: ethmoid sinus invasion, primary gross tumor volume, age, and pretreatment body mass index. The C-index of the nomogram for local recurrence was 0.732 (95% confidence interval, 0.726 to 0.738), indicating excellent predictive accuracy. The calibration curve revealed excellent agreement between nomogram-predicted and observed LRFS probabilities. Risk subgroups based on total point score cutoff values enabled effective discrimination of LRFS. CONCLUSION This pretreatment nomogram enables clinicians to accurately predict LRFS in T4 NPC after definitive IMRT, and could help to facilitate personalized patient counselling and treatment strategies.
- Published
- 2017
33. Prognostic value of cervical nodal tumor volume in nasopharyngeal carcinoma: Analysis of 1230 patients with positive cervical nodal metastasis
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Zhen Yu Qi, Fo Ping Chen, Li Lin, Ying Sun, Xiao Ju Wang, Guan Qun Zhou, and Jiang Hu
- Subjects
0301 basic medicine ,Oncology ,Male ,Dose-volume histogram ,Adjuvant Chemotherapy ,Cancer Treatment ,lcsh:Medicine ,Metastasis ,0302 clinical medicine ,Nasopharynx ,Basic Cancer Research ,Medicine and Health Sciences ,Prospective Studies ,Stage (cooking) ,Prospective cohort study ,lcsh:Science ,Pathology and laboratory medicine ,Multidisciplinary ,Nasopharyngeal Carcinoma ,Pharmaceutics ,Hazard ratio ,Medical microbiology ,Middle Aged ,Prognosis ,Tumor Burden ,Treatment Outcome ,030220 oncology & carcinogenesis ,Lymphatic Metastasis ,Viruses ,Female ,Anatomy ,Pathogens ,Research Article ,Clinical Oncology ,Adult ,medicine.medical_specialty ,Herpesviruses ,Adolescent ,Radiation Therapy ,Carcinomas ,Microbiology ,Lymphatic System ,03 medical and health sciences ,Cancer Chemotherapy ,Young Adult ,Drug Therapy ,Diagnostic Medicine ,Internal medicine ,medicine ,Cancer Detection and Diagnosis ,Chemotherapy ,Epstein-Barr virus ,Humans ,Aged ,Proportional Hazards Models ,Receiver operating characteristic ,Proportional hazards model ,business.industry ,lcsh:R ,Carcinoma ,Organisms ,Viral pathogens ,Cancers and Neoplasms ,Biology and Life Sciences ,Nasopharyngeal Neoplasms ,medicine.disease ,Confidence interval ,Microbial pathogens ,030104 developmental biology ,Nasopharyngeal carcinoma ,lcsh:Q ,Lymph Nodes ,Clinical Medicine ,Neoplasm Recurrence, Local ,business ,DNA viruses ,Neck - Abstract
Purpose To investigate the variability and prognostic value of nodal tumor volume (NTV) in nasopharyngeal carcinoma (NPC). Methods and materials Data on 1230 patients with newly diagnosed stage T1-4N1-3M0 NPC treated with definitive radiation therapy with or without chemotherapy at a single cancer center were reviewed. NTV was determined from dose volume histogram (DVH) data. X-tile analysis was applied to identify the optimal cut-off points for the NTV with respect to regional recurrence-free survival (RRFS). Correlations between the TNM classification system, NTV and RRFS were assessed using a Cox regression model. Cross-validation based on receiver operating characteristic (ROC) curve analysis was applied to compare the prognostic predictive validity of NTV and N categories. Results Within a median follow-up of 49.9 (range, 1.27-76.40) months, 61/1230 (5%) patients developed regional recurrence and 154 (12.5%) developed distant metastasis. NTV values of 7.2 cc and 35.7 cc were identified as the optimal cut-off points. Patients with larger NTV had poorer prognosis. Compared with the N category, NTV was better at determining RRFS for patients with NPC. Hazard ratios increased with NTV, ranging from 1.86 (95% confidence interval [95% CI], 0.92-3.78) for NTV between 7.2 cc to 35.7 cc, and 3.67 (95% CI, 1.58-8.50) for NTV > 35.7 cc. With both NTV and N category in the same Cox regression model, only NTV remained statistically significant in the RRFS of NPC. The validation results with ROC curves also revealed that, NTV was superior to N category for predicting RRFS with significantly larger area under the ROC curve. Conclusions NTV offers important prognostic value for treatment outcomes in NPC, especially regional control. Volumetric analysis of nodal involvement may assist selection of patients with poor prognosis.
- Published
- 2017
34. Prognostic value of serum Epstein-Barr virus antibodies in patients with nasopharyngeal carcinoma and undetectable pretreatment Epstein-Barr virus DNA
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Si Yang Wang, Zhi Bin Cheng, Ji Jin Yao, Ya Nan Jin, Wangjian Zhang, Ying Sun, Zhen Yu Qi, Li Lin, Guan Qun Zhou, and Fan Zhang
- Subjects
0301 basic medicine ,Male ,Cancer Research ,Epstein-Barr Virus Infections ,Herpesvirus 4, Human ,medicine.disease_cause ,Antibodies, Viral ,Gastroenterology ,0302 clinical medicine ,Stage (cooking) ,Epstein–Barr virus antibodies ,Nasopharyngeal Carcinoma ,biology ,General Medicine ,Middle Aged ,Prognosis ,viral capsid antigen ,Oncology ,030220 oncology & carcinogenesis ,Female ,Original Article ,Antibody ,Adult ,medicine.medical_specialty ,Adolescent ,Viral capsid antigen ,Virus ,03 medical and health sciences ,Young Adult ,Clinical Research ,Internal medicine ,medicine ,otorhinolaryngologic diseases ,Humans ,In patient ,prognostic value ,Early antigen ,Aged ,Neoplasm Staging ,business.industry ,Carcinoma ,Nasopharyngeal Neoplasms ,Original Articles ,medicine.disease ,Epstein–Barr virus ,Virology ,Survival Analysis ,stomatognathic diseases ,030104 developmental biology ,Nasopharyngeal carcinoma ,biology.protein ,Capsid Proteins ,business - Abstract
Epstein–Barr virus (EBV) is closely associated with nasopharyngeal carcinoma (NPC). Serum IgA antibodies against early antigen (EA‐IgA) and viral capsid antigen (VCA‐IgA) are the most commonly used to screen for NPC in endemic areas. However, the prognostic value of serum EA‐IgA and VCA‐IgA in patients with NPC is less clear. We hypothesize that serum EA‐IgA and VCA‐IgA levels have prognostic impact for survival outcomes in NPC patients with undetectable pretreatment EBV (pEBV) DNA. In this series, 334 patients with non‐metastatic NPC and undetectable pEBV DNA were included. Serum EA‐IgA and VCA‐IgA were determined by ELISA. After analysis, serum EA‐IgA and VCA‐IgA loads correlated positively with T, N, and overall stage (all P 1:120 had significantly inferior 5‐year progression‐free survival (80.4% vs 89.6%, P = 0.025), distant metastasis‐free survival (88.4% vs 94.8%, P = 0.050), and locoregional relapse‐free survival (88.4% vs 95.6%, P = 0.023; log–rank test). Multivariable analyses revealed that N stage was the only independent prognostic factor (all P
- Published
- 2017
35. The development and implementation of MOSAIQ Integration Platform (MIP) based on the radiotherapy workflow
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Ying Sun, Yun Fei Xia, X. Huang, Ning Shan Zhong, Xin Yang, Meng Zhong Liu, Cheng Guang Lin, Zhen Yu Qi, Xiao Bo Jiang, Zhen Yu He, Xiao Wu Deng, Hui Liu, Jiang Hu, Yong Bao, Qiao Qiao Li, Yuanhong Gao, Mao Sheng Lin, Bao Yue Li, and Lian Ying Hu
- Subjects
Database ,Computer science ,business.industry ,Integration platform ,Cloud computing ,Document management system ,computer.software_genre ,Microsoft Visual Studio ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,Management information systems ,0302 clinical medicine ,Workflow ,030220 oncology & carcinogenesis ,Server ,Systems management ,Network service ,business ,computer - Abstract
To meet the special demands in China and the particular needs for the radiotherapy department, a MOSAIQ Integration Platform CHN (MIP) based on the workflow of radiation therapy (RT) has been developed, as a supplement system to the Elekta MOSAIQ. The MIP adopts C/S (client-server) structure mode, and its database is based on the Treatment Planning System (TPS) and MOSAIQ SQL Server 2008, running on the hospital local network. Five network servers, as a core hardware, supply data storage and network service based on the cloud services. The core software, using C# programming language, is developed based on Microsoft Visual Studio Platform. The MIP server could offer network service, including entry, query, statistics and print information for about 200 workstations at the same time. The MIP was implemented in the past one and a half years, and some practical patient-oriented functions were developed. And now the MIP is almost covering the whole workflow of radiation therapy. There are 15 function modules, such as: Notice, Appointment, Billing, Document Management (application/execution), System Management, and so on. By June of 2016, recorded data in the MIP are as following: 13546 patients, 13533 plan application, 15475 RT records, 14656 RT summaries, 567048 billing records and 506612 workload records, etc. The MIP based on the RT workflow has been successfully developed and clinically implemented with real-time performance, data security, stable operation. And it is demonstrated to be user-friendly and is proven to significantly improve the efficiency of the department. It is a key to facilitate the information sharing and department management. More functions can be added or modified for further enhancement its potentials in research and clinical practice.
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- 2017
36. The detrimental effects of radiotherapy interruption on local control after concurrent chemoradiotherapy for advanced T-stage nasopharyngeal carcinoma: an observational, prospective analysis
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Zhi-Bin, Guan-Qun Zhou, Zhen-Yu Qi, Fan Zhang, Ya-Nan Jin, Si-Yang Wang, Jun Ma, Ying Sun, Ji-Jin Yao, Cheng, and Wangjian Zhang
- Subjects
Oncology ,Adult ,Male ,Cancer Research ,medicine.medical_specialty ,medicine.medical_treatment ,Nasopharyngeal neoplasm ,lcsh:RC254-282 ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Genetics ,medicine ,Humans ,Prospective Studies ,Advanced T stage ,Prospective cohort study ,Radiotherapy interruption ,Aged ,Neoplasm Staging ,Proportional Hazards Models ,Nasopharyngeal Carcinoma ,Receiver operating characteristic ,Proportional hazards model ,business.industry ,Nasopharyngeal Neoplasms ,Chemoradiotherapy ,Middle Aged ,medicine.disease ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Prognosis ,Concurrent chemoradiotherapy ,Radiation therapy ,Nasopharyngeal carcinoma ,Local control ,030220 oncology & carcinogenesis ,T-stage ,Female ,business ,human activities ,Research Article - Abstract
Background Previous studies have reported radiotherapy interruption (RTI) is associated with poor local control in two-dimensional radiotherapy (2DRT) era. However, it remains unclear whether RTI still affects local control for advanced T stage (T3–4) in the intensity-modulated radiation therapy (IMRT) era. We aim to evaluate whether RTI affects local control for T3–4 NPC treated with definitive IMRT. Methods In this observational prospective study, 447 T3–4 NPC patients treated with IMRT plus concurrent chemotherapy were included. All patients completed the planned radiotherapy course, and RTI was defined as the actual time taken to finish the prescribed course of radiotherapy minus the planned radiotherapy time. Receiver operating characteristic (ROC) curve was used for determined the cutoff point of RTI. The effects of RTI on local control were analyzed in multivariate analysis. Results At 5 years, the local relapse-free survival (LRFS) and overall survival (OS) rates were 93.7 and 85.7%, respectively. The cutoff RTI for LRFS was 5.5 days by ROC curve. Compared to patients with RTI > 5 days, patients with RTI ≤ 5 days had a significantly lower rate of LRFS (97% vs. 83%; P
- Published
- 2016
37. HsfA1a upregulates melatonin biosynthesis to confer cadmium tolerance in tomato plants
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Yan-Hong Zhou, You Ping Xu, Zhen Yu Qi, Russel J. Reiter, Golam Jalal Ahammed, Jie Zhou, Xiao-Jian Xia, Yun Zhang, Kai Shi, Meng Qi Li, Jing-Quan Yu, and Shu Yu Cai
- Subjects
0106 biological sciences ,0301 basic medicine ,Chromatin Immunoprecipitation ,Electrophoretic Mobility Shift Assay ,Biology ,Catechol O-Methyltransferase ,01 natural sciences ,Polymerase Chain Reaction ,Melatonin ,03 medical and health sciences ,Endocrinology ,Heat Shock Transcription Factors ,Solanum lycopersicum ,Transcription (biology) ,Gene Expression Regulation, Plant ,Stress, Physiological ,medicine ,Gene silencing ,Electrophoretic mobility shift assay ,Gene ,Transcription factor ,Chromatography, High Pressure Liquid ,Heat-Shock Proteins ,Plant Proteins ,food and beverages ,Promoter ,Plants, Genetically Modified ,Cell biology ,DNA-Binding Proteins ,030104 developmental biology ,Biochemistry ,Gene Knockdown Techniques ,Chromatin immunoprecipitation ,010606 plant biology & botany ,medicine.drug ,Cadmium ,Transcription Factors - Abstract
Melatonin regulates broad aspects of plant responses to various biotic and abiotic stresses, but the upstream regulation of melatonin biosynthesis by these stresses remains largely unknown. Herein, we demonstrate that transcription factor heat-shock factor A1a (HsfA1a) conferred cadmium (Cd) tolerance to tomato plants, in part through its positive role in inducing melatonin biosynthesis under Cd stress. Analysis of leaf phenotype, chlorophyll content, and photosynthetic efficiency revealed that silencing of the HsfA1a gene decreased Cd tolerance, whereas its overexpression enhanced plant tolerance to Cd. HsfA1a-silenced plants exhibited reduced melatonin levels, and HsfA1a overexpression stimulated melatonin accumulation and the expression of the melatonin biosynthetic gene caffeic acid O-methyltransferase 1 (COMT1) under Cd stress. Both an in vitro electrophoretic mobility shift assay and in vivo chromatin immunoprecipitation coupled with qPCR analysis revealed that HsfA1a binds to the COMT1 gene promoter. Meanwhile, Cd stress induced the expression of heat-shock proteins (HSPs), which was compromised in HsfA1a-silenced plants and more robustly induced in HsfA1a-overexpressing plants under Cd stress. COMT1 silencing reduced HsfA1a-induced Cd tolerance and melatonin accumulation in HsfA1a-overexpressing plants. Additionally, the HsfA1a-induced expression of HSPs was partially compromised in COMT1-silenced wild-type or HsfA1a-overexpressing plants under Cd stress. These results demonstrate that HsfA1a confers Cd tolerance by activating transcription of the COMT1 gene and inducing accumulation of melatonin that partially upregulates expression of HSPs.
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- 2016
38. Prognostic factors and failure patterns in non-metastatic nasopharyngeal carcinoma after intensity-modulated radiotherapy
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Lei Chen, Ying Sun, Ai Hua Lin, Jun Ma, Li Zhi Liu, Guan Qun Zhou, Yan Ping Mao, Ling Long Tang, Zhen Yu Qi, and Li Li
- Subjects
Adult ,Male ,Oncology ,medicine.medical_specialty ,Adolescent ,Intensity-modulated radiotherapy ,medicine.medical_treatment ,Nasopharyngeal neoplasm ,lcsh:RC254-282 ,030218 nuclear medicine & medical imaging ,Young Adult ,Failure pattern ,03 medical and health sciences ,0302 clinical medicine ,Retropharyngeal lymph nodes ,Internal medicine ,Nasopharyngeal carcinoma ,medicine ,Humans ,Treatment Failure ,Survival rate ,Survival analysis ,Aged ,Neoplasm Staging ,Retrospective Studies ,business.industry ,Proportional hazards model ,Nasopharyngeal Neoplasms ,Middle Aged ,Tumor staging ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Prognosis ,medicine.disease ,Survival Rate ,Radiation therapy ,medicine.anatomical_structure ,Cervical lymph nodes ,030220 oncology & carcinogenesis ,Female ,Original Article ,Radiotherapy, Intensity-Modulated ,Neoplasm Recurrence, Local ,business ,Follow-Up Studies - Abstract
Background The prognostic values of staging parameters require continual re-assessment amid changes in diagnostic and therapeutic methods. This study aimed to identify the prognostic factors and failure patterns of non-metastatic nasopharyngeal carcinoma (NPC) in the intensity-modulated radiotherapy (IMRT) era. Methods We reviewed the data from 749 patients with newly diagnosed, biopsy-proven, non-metastatic NPC in our cancer center (South China, an NPC endemic area) between January 2003 and December 2007. All patients underwent magnetic resonance imaging (MRI) before receiving IMRT. The actuarial survival rates were estimated using the Kaplan–Meier method, and survival curves were compared using the log-rank test. Multivariate analyses with the Cox proportional hazards model were used to test for the independent prognostic factors by backward eliminating insignificant explanatory variables. Results The 5-year occurrence rates of local failure, regional failure, locoregional failure, and distant failure were 5.4, 3.0, 7.4, and 17.4%, respectively. The 5-year survival rates were as follows: local relapse-free survival, 94.6%; nodal relapse-free survival, 97.0%; distant metastasis-free survival, 82.6%; disease-free survival, 75.1%; and overall survival, 82.0%. Multivariate Cox regression analysis revealed that orbit involvement was the only significant prognostic factor for local failure (P = 0.011). Parapharyngeal tumor extension, retropharyngeal lymph node involvement, and the laterality, longest diameter, and Ho’s location of the cervical lymph nodes were significant prognostic factors for both distant failure and disease failure (all P
- Published
- 2016
39. Microstructures and Mechanical Properties of Al-12.7Si-0.7Mg Alloy Welded Joints
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Zhen Yu Qi, Liang Zuo, Chang Shu He, Xiang Zhao, Hao Wang, and Dong Wang
- Subjects
Materials science ,Alloy ,Metallurgy ,General Engineering ,Welding ,engineering.material ,Microstructure ,Gas metal arc welding ,law.invention ,law ,Ultimate tensile strength ,engineering ,Extrusion ,Composite material ,Joint (geology) ,Tensile testing - Abstract
3-mm thick Al-12.7Si-0.7Mg alloy plates were cut from the hot extrusion profiles. A butt-welding joint was made by gas metal arc welding (GMAW). The microstructures and mechanical properties of welded joint were studied by scanning electron microscope and tensile test methods. The results show that weld bead with good appearance and internal quality was obtained under the optimized welding parameters. The ultimate tensile strength for base material and welded joints of hot extrusion Al-12.7Si-0.7Mg alloy are much higher than that of 6063 alloy in T4 condition.
- Published
- 2013
40. Is pretreatment Epstein-Barr virus DNA still associated with 6-year survival outcomes in locoregionally advanced nasopharyngeal carcinoma?
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Ya Nan Jin, Ji Jin Yao, Si Yang Wang, Guan Qun Zhou, Zhen Yu Qi, Fan Zhang, Ying Sun, and Wangjian Zhang
- Subjects
0301 basic medicine ,medicine.medical_specialty ,Survival ,medicine.medical_treatment ,Subgroup analysis ,Gastroenterology ,law.invention ,Overall stage ,03 medical and health sciences ,0302 clinical medicine ,law ,Internal medicine ,medicine ,Nasopharyngeal carcinoma ,In patient ,Stage (cooking) ,Prognostic value ,Polymerase chain reaction ,Chemotherapy ,business.industry ,Epstein-Barr virus DNA ,Radical radiotherapy ,medicine.disease ,030104 developmental biology ,Oncology ,030220 oncology & carcinogenesis ,business ,Research Paper - Abstract
Purpose: The objective of this study was to confirm the association between pretreatment Epstein-Barr virus (EBV) DNA (pre-DNA) load and survival outcomes after long-term follow-up in patients with locoregionally advanced nasopharyngeal carcinoma (LA-NPC). Materials and Methods: Between November 2009 and February 2012, a total of 1036 patients with LA-NPC were enrolled. There were 762 patients in stage III and 274 in stage IVA-B. All patients were treated with radical radiotherapy with or without chemotherapy, and pre-DNA concentrations were quantified by a polymerase chain reaction assay. Patient outcomes were evaluated. Results: The 5-year overall survival (OS), distant metastasis-free surviva (DMFS), locoregional relapse-free survival (LRFS), and progression-free survival (PFS) rates were 84.7%, 87.0%, 90.2%, and 77.1%, respectively. By using previously defined pre-DNA cutoff value (1500 copies/ml pretreatment), pre-DNA was an independent prognostic predictor for OS, DMFS, and PFS using log-rank test. Multivariate Cox analysis also confirmed these results. Subgroup analysis indicated that the 5-year OS, DMFS, and PFS rates in patients staged IVA-B with pre-DNA < 1500 copies/ml were similar to those patients staged III with pre-DNA ≥ 1500 copies/ml, whereas patients staged IVA-B patients with pre-DNA ≥ 1500 copies/ml predicted worse outcome. Conclusions: In this expanded study, the prognostic significance of pre-DNA was confirmed using predefined cutoff value in an independent patient group, and pre-DNA was identified as an independent prognostic marker for the risk stratification in LA-NPC.
- Published
- 2016
41. A real-time in vivo dosimetric verification method for high-dose rate intracavitary brachytherapy of nasopharyngeal carcinoma
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Shao Min Huang, Anatoly B. Rosenfeld, Zhen Yu Qi, Xiao Wu Deng, Xin Ping Cao, and Michael L. F Lerch
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Dosimeter ,business.industry ,medicine.medical_treatment ,Brachytherapy ,Dose fractionation ,General Medicine ,Imaging phantom ,Radiation therapy ,Calibration ,Medicine ,Dosimetry ,business ,Radiation treatment planning ,Nuclear medicine - Abstract
Purpose: A real-timein vivodosimetric verification method using metal-oxide-semiconductor field effect transistor (MOSFET)dosimeters has been developed for patient dosimetry in high-dose rate (HDR) intracavitary brachytherapy of nasopharyngeal carcinoma (NPC). Methods: The necessary calibration and correction factors for MOSFET measurements in192Iridium source were determined in a water phantom. With the detector placed inside a custom-made nasopharyngeal applicator, the actual dosedelivered to the tumor was measured in vivo and compared to the calculated values using a commercial brachytherapy planning system. Results: Five MOSFETs were independently calibrated with the HDR source, yielding calibration factors of 0.48 ± 0.007 cGy/mV. The maximum sensitivity variation was no more than 7% in the clinically relevant distance range of 1–5 cm from the source. A total of 70in vivo measurements in 11 NPC patients demonstrated good agreement with the treatment planning. The mean differences between the planned and the actually delivereddose within a single treatment fraction were −0.1% ± 3.8% and −0.1% ± 3.7%, respectively, for right and left side assessments. The maximum dose deviation was less than 8.5%. Conclusions: In vivo measurement using the real-time MOSFETdosimetry system is possible to evaluate the actual dose to the tumor received by the patient during a treatment fraction and thus can offer another line of security to detect and prevent large errors.
- Published
- 2012
42. Investigation on the impact to beam characteristics of a linear accelerator related to duty cycle of respiratory gating
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Xiao Wu Deng, Wen Zhao Sun, Zhen Yu Qi, Guang Wen Luo, and Wu Fei Cao
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Reproducibility ,Radiation ,Materials science ,business.industry ,Flatness (systems theory) ,Gating ,Imaging phantom ,Linear particle accelerator ,Optics ,Duty cycle ,Laser beam quality ,business ,Instrumentation ,Beam (structure) - Abstract
Background and objective Respiratory-gated techniques are based on controlling the linear accelerator and limiting the beam-on time to only a small portion of the patient’s breathing cycle. For each beam-on, the machine must spend a start-up time (ST) to set up a stable and correct RF field in the waveguide and get the right beam current, etc. That might cause an obvious variation on the beam dosimetric characteristic, including the beam quality and profile, when the duration of ST is un-ignorable to the beam-on time. The purpose of this study is to investigate this kind of impact for various duty cycles (DC) of breathing-gated operation. Materials and method A respiratory motion phantom and a Real-time Position Management System (RPM) were used to simulate the patient respiration and to control the beam gating. Measurements were performed on a Varian 600C/D linac with 6 MV photons, using different DCs of 5%, 7%, 10%, 12%, 20%, 50%, 75%, and 100% to a 6-s breathing cycle (BC) simulation. The beam quality, flatness, symmetry were evaluated for these conditions. Output reproducibility and dose linearity were measured and evaluated for different MUs at 400 MU/min dose rate and 30% DC as well. Results For gated delivery in the above selected DCs and BC, the maximum changes in beam quality, symmetry, flatness were −0.181%, 0.124%, −0.17%, compared with non-gated data respectively. The coefficient of dispersion of output was less than 0.3% and good dose linearity was obtained for the tested gating operation condition. Conclusion For situation similar to our experiment, the duty cycle effect to beam characteristics is ignorable that the beam modeling based on non-gated delivery can be directly used for respiratory gating therapy. Otherwise, the beam characteristics should be carefully checked individually.
- Published
- 2011
43. Primary Tumor Extension Probability-based Prediction of Individualized Clinical Target Volume for Nasopharyngeal Carcinoma
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Xiao Ju Wang, F. Li, Ling-Long Tang, Li Lin, S.B. Liang, Yao Lu, Jun Ma, X.J. Du, Jie Tian, Sha Yu, X.L. Yu, Yi Sun, Jiang Hu, Wei Jiang, J.F. Liao, Guan Qun Zhou, F.P. Chen, and Zhen Yu Qi
- Subjects
Cancer Research ,medicine.medical_specialty ,Radiation ,business.industry ,Planning target volume ,Extension (predicate logic) ,medicine.disease ,Primary tumor ,Oncology ,Nasopharyngeal carcinoma ,medicine ,Radiology, Nuclear Medicine and imaging ,Radiology ,business - Published
- 2018
44. In vivoverification of superficial dose for head and neck treatments using intensity-modulated techniques
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Li Zhang, Zhi-Chun He, Michael L. F Lerch, Zhen-Yu Qi, Xiaowu Deng, Dean L Cutajar, Anatoly B. Rosenfeld, Shaomin Huang, X. Allen Li, Peter E Metcalfe, and Ian Kwan
- Subjects
Materials science ,Equivalent dose ,business.industry ,Detector ,Ionization chamber ,Relative biological effectiveness ,Dosimetry ,Dose profile ,General Medicine ,Nuclear medicine ,business ,Particle detector ,Imaging phantom - Abstract
Skin dose is one of the key issues for clinical dosimetry in radiation therapy. Currently planning computer systems are unable to accurately predict dose in the buildup region, leaving ambiguity as to the dose levels actually received by the patient's skin during radiotherapy. This is one of the prime reasons why in vivo measurements are necessary to estimate the dose in the buildup region. A newly developed metal-oxide-semiconductor-field-effect-transistor (MOSFET) detector designed specifically for dose measurements in rapidly changing dose gradients was introduced for accurate in vivo skin dosimetry. The feasibility of this detector for skin dose measurements was verified in comparison with plane parallel ionization chamber and radiochromic films. The accuracy of a commercial treatment planning system (TPS) in skin dose calculations for intensity-modulated radiation therapy treatment of nasopharyngeal carcinoma was evaluated using MOSFET detectors in an anthropomorphic phantom as well as on the patients. Results show that this newly developed MOSFET detector can provide a minimal but highly reproducible intrinsic buildup of 7 mg cm(-2) corresponding to the requirements of personal surface dose equivalent Hp (0.07). The reproducibility of the MOSFET response, in high sensitivity mode, is found to be better than 2% at the phantom surface for the doses normally delivered to the patients. The MOSFET detector agrees well with the Attix chamber and the EBT Gafchromic film in terms of surface and buildup region dose measurements, even for oblique incident beams. While the dose difference between MOSFET measurements and TPS calculations is within measurement uncertainty for the depths equal to or greater than 0.5 cm, an overestimation of up to 8.5% was found for the surface dose calculations in the anthropomorphic phantom study. In vivo skin dose measurements reveal that the dose difference between the MOSFET results and the TPS calculations was on average -7.2%, ranging from -4.3% to -9.2%. The newly designed MOSFET detector encapsulated into a thin water protective film has a minimal reproducible intrinsic buildup recommended for skin dosimetry. This feature makes it very suitable for routine IMRT QA and accurate in vivo skin dosimetry.
- Published
- 2008
45. Skin dosimetry with new MOSFET detectors
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M. Safavi-Naeni, Joseph Bucci, Michael L. F Lerch, Anatoly B. Rosenfeld, Dean Wilkinson, Y. Chin, Dean L Cutajar, Zhen-Yu Qi, Martin J Butson, Ian Kwan, and Vladimir Perevertaylo
- Subjects
Radiation ,Materials science ,business.industry ,Transistor ,Detector ,Semiconductor device ,law.invention ,Optics ,law ,MOSFET ,Dosimetry ,Field-effect transistor ,Radiation protection ,business ,Nuclear medicine ,Instrumentation - Abstract
The MO Skin , a new MOSFET-based detector designed by the Centre for Radiation Physics, was engineered to provide accurate measurements of skin doses in radiotherapy and personal monitoring. The International Commission on Radiological Protection (ICRP) estimates the radiosensitive basal layer to be at an average depth of 0.070 mm. Current commercially available MOSFETs utilize an epoxy bubble encapsulation, making measurements at equivalent depths of 0.070 mm difficult. The MO Skin utilizes a novel packaging design that allows the measurement of doses at this equivalent depth. The MO Skin has shown excellent agreement with the Attix chamber for surface measurements in a 6 MV photon beam of various field sizes and has minimal angular dependence due to the encapsulation. The new design will diversify the use of MOSFETs for dosimetry in radiotherapy and radiation protection.
- Published
- 2008
46. Verification of the plan dosimetry for high dose rate brachytherapy using metal-oxide-semiconductor field effect transistor detectors
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Anatoly B. Rosenfeld, Dean L Cutajar, Shaomin Huang, Jie Lu, Zhen-Yu Qi, Xiaowu Deng, and Michael L. F Lerch
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Materials science ,business.industry ,medicine.medical_treatment ,Brachytherapy ,Detector ,General Medicine ,High-Dose Rate Brachytherapy ,Imaging phantom ,Particle detector ,Optics ,Ionization chamber ,medicine ,Dosimetry ,Field-effect transistor ,business ,Nuclear medicine - Abstract
The feasibility of a recently designed metal-oxide-semiconductor field effect transistor (MOSFET) dosimetry system for dose verification of high dose rate (HDR) brachytherapy treatment planning was investigated. MOSFET detectors were calibrated with a 0.6 cm3 NE-2571 Farmer-type ionization chamber in water. Key characteristics of the MOSFET detectors, such as the energy dependence, that will affect phantom measurements with HDR 192Ir sources were measured. The MOS-FET detector was then applied to verify the dosimetric accuracy of HDR brachytherapy treatments in a custom-made water phantom. Three MOSFET detectors were calibrated independently, with the calibration factors ranging from 0.187 to 0.215 cGy/mV. A distance dependent energy response was observed, significant within 2 cm from the source. The new MOSFET detector has a good reproducibility (
- Published
- 2007
47. Clinical Outcomes of Volume-Modulated Arc Therapy in 205 Patients with Nasopharyngeal Carcinoma: An Analysis of Survival and Treatment Toxicities
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Ling Long Tang, Guan Qun Zhou, Zhen Yu Qi, Li Zhi Liu, Jun Ma, Yan Ping Mao, Rui Guo, Meng Zhong Liu, Ying Sun, and Ai Hua Lin
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Oncology ,Adult ,Male ,medicine.medical_specialty ,medicine.medical_treatment ,Nasopharyngeal neoplasm ,lcsh:Medicine ,Radiation Dosage ,Disease-Free Survival ,Metastasis ,Young Adult ,Internal medicine ,otorhinolaryngologic diseases ,medicine ,Carcinoma ,Humans ,Prospective Studies ,lcsh:Science ,Prospective cohort study ,Aged ,Neoplasm Staging ,Chemotherapy ,Multidisciplinary ,Nasopharyngeal Carcinoma ,business.industry ,Radiotherapy Planning, Computer-Assisted ,lcsh:R ,Nasopharyngeal Neoplasms ,Radiotherapy Dosage ,Middle Aged ,medicine.disease ,Radiation therapy ,stomatognathic diseases ,Nasopharyngeal carcinoma ,lcsh:Q ,Female ,Volume Modulated Arc Therapy ,Radiotherapy, Intensity-Modulated ,business ,Research Article ,Follow-Up Studies - Abstract
BACKGROUND:To investigate the clinical efficacy and treatment toxicity of volume-modulated arc therapy (VMAT) for nasopharyngeal carcinoma (NPC). MATERIAL AND METHODS:205 VMAT-treated NPC patients from our cancer center were prospectively entrolled. All patients received 68-70 Gy irradiation based on the planning target volume of the primary gross tumor volume. Acute and late toxicities were graded according to the Common Terminology Criteria for Adverse Events v3.0 and Radiation Therapy Oncology Group Late Radiation Morbidity Scoring Criteria. RESULTS:The median follow-up period was 37.3 months (range, 6.3-45.1 months). The 3-year estimated local failure-free survival, regional failure-free survival, locoregional failure-free survival, distant metastasis-free survival, disease-free survival and overall survival were 95.5%, 97.0%, 94.0%, 92.1%, 86.8% and 97.0%, respectively. Cox regression analysis showed primary gross tumor volume, N stage and EBV-DNA to be independent predictors of VMAT outcomes (P < 0.05). The most common acute and late side effects were grade 2-3 mucositis (78%) and xerostomia (83%, 61%, 34%, and 9% at 3, 6, 12 and 24 months after VMAT), respectively. CONCLUSIONS:VMAT for the primary treatment of NPC achieved very high locoregional control with a favorable toxicity profile. The time-saving benefit of VMAT will enable more patients to receive precision radiotherapy.
- Published
- 2015
48. A novel full-length gene of human ribosomal protein L14.22 related to human glioma
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Guo-Zhen Hui, Zhen-Yu Qi, Yao Li, Zongxiang Zhou, Yi Xie, and Shao-Hua Gu
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Ribosomal Proteins ,DNA, Complementary ,Molecular Sequence Data ,Clone (cell biology) ,Biology ,Ribosomal protein ,Complementary DNA ,Escherichia coli ,Humans ,Amino Acid Sequence ,RNA, Messenger ,Northern blot ,Cloning, Molecular ,Gene ,Oligonucleotide Array Sequence Analysis ,Messenger RNA ,Base Sequence ,Nucleic acid sequence ,Glioma ,Sequence Analysis, DNA ,General Medicine ,Blotting, Northern ,Molecular biology ,Recombinant Proteins ,Gene chip analysis ,Electrophoresis, Polyacrylamide Gel - Abstract
Background This study was undertaken to obtain differentially expressed genes related to human glioma by cDNA microarray and the characterization of a novel full-length gene. Methods Total RNA was extracted from human glioma and normal brain tissues, and mRNA was used as a probe. The results of hybridization procedure were scanned with the computer system. The gene named 507E08 clone was subsequently analyzed by northern blot, bioinformatic approach, and protein expression. Results Fifteen differentially expressed genes were obtained from human glioma by hybridization and scanning for four times. Northern blot analysis confirmed that the 507E08 clone was low expressed in human brain tissue and over expressed in human glioma tissues. The analysis of BLASTn and BLASTx showed that the 507E08 clone was a novel full-length gene, which codes 203 amino acid of protein and is called human ribosomal protein 14.22 gene. The nucleotide sequence had been submitted to the GenBank™ with the accession number of AF329277. After expression in E.coli., protein yielded a major band of apparent molecular mass 22 kDa on an SDS-PAGE gel. Conclusions cDNA microarray technology can be successfully used to identify differentially expressed genes. The novel full-length gene of human ribosomal protein 14.22 may be correlated with the development of human glioma.
- Published
- 2006
49. Dosimetric analysis of a shielded applicator for nasopharyngeal carcinoma intracavitary brachytherapy: Monte Carlo calculation
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Zhen Yu Qi, Shiu Ying Tsao, Ri An You, Jian Yang Qian, Li Xin Chen, Xiao Wu Deng, and Xiao Wei Liu
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business.industry ,medicine.medical_treatment ,Monte Carlo method ,Brachytherapy ,General Medicine ,Effective dose (radiation) ,law.invention ,Lead shielding ,Region of interest ,law ,Electromagnetic shielding ,Shielded cable ,Medicine ,Dosimetry ,business ,Nuclear medicine - Abstract
In nasopharyngeal cancer (NPC) intracavitary brachytherapy, an anatomical dose reference point (in line with that for gynecology work), e.g., at the sphenoid floor, is more precise than the empirical point of 1 cm from the source. However, such increases of the single-source-plan treatment distances may deliver excessive doses inferiorly, to the soft palate. As shielding may help, its efficacy was studied by Monte Carlo simulations in water for 20 and 30 mm diameter spherical NP applicators (representing extremes of sizes for the small NP cavity), with/without lead shielding inferiorly, using a single linear Ir-192, 2 mm steps, equal dwell times for 5 (5DP) and 9 dwell positions (9DP). Dose reductions of the selected points of interest ranged from 1.2% to 40.5% for the 20 mm shielded applicator and a range of 2.9% to 17.9%, for the 30 mm shielded applicator. Dose volume histograms of the “region of interest” (ROI)—a cuboid of 4 × 4 × 0.5 cm 3 at the most inferior aspect of the applicator, also differed significantly. The highest doses of the 50% ( D 50 ) and 20% ( D 20 ) volumes of ROI (for 5DP and 9DP plans) were reduced by 11.9% to 17.9% for the 20 mm applicator and a range of 9.0% to 11.5% for the 30 mm shielded applicator. Doses in unshielded directions were insignificantly changed, for example, with a 20 mm applicator simulated in a 5DP plan, the dose distribution close to the source in the unshielded direction has less than 4% difference at the 50% isodose relative to the dose prescription point. For the 30 mm shielded applicator, despite smaller dose reduction percentages, a more pronounced effective dose reduction was obtained than nominal values when considering radiobiological equivalent doses. Our system was demonstrated to be ready for clinical assessment.
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- 2006
50. [Untitled]
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Chao Qun Wu, Zhen Yu Qi, Xie Yi, Guo Zhen Hui, Kang Ying, Yao Li, Rong Tang, Zhong Ping Chen, and Zong Xiang Zhou
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Cancer Research ,Biology ,Molecular biology ,Neurology ,Oncology ,Suppression subtractive hybridization ,Complementary DNA ,Gene expression ,Gene chip analysis ,Neurology (clinical) ,Northern blot ,Representational difference analysis ,DNA microarray ,Gene - Abstract
Identification of the genes that are differentially expressed between brain tumor and normal brain tissues is important for understanding the molecular basis of these nerve system tumors and for defining possible targets for therapeutic intervention. This investigation is intended to obtain differentially expressed genes related to human glioma using cDNA microarray. Total RNA was extracted from human glioma specimens and normal brain tissues, and mRNA was obtained by oligotex chromatography. The cDNA microarray contains 4366 novel cDNA clones. The results of hybridization were scanned using computer system. Two genes selected from the results of cDNA microarray hybridization were subsequently analyzed by bio-informatic approach, Northern blot, in situ hybridization and radiation hybridization. We demonstrated that at a differentially expressed ration of two to three times, 15 cDNA clones were considered differentially expressed. Two novel full-length genes were selected for further investigation, one named human PKIβ gene (clone 436F11, GenBankTM with accession number: AF225513) was over-expressed in normal brain tissues and the other named human ribosomal protein L14.22 gene (clone 507E08, GenBankTM with accession number: AF329277) was over-expressed in gliomas. Furthermore, the 436F11 gene was located on 6q21–q23 between the D6S304 and D6S2156 markers, while the 507E08 gene was located between the D14S1066 and D14S265 markers. We realized that cDNA microarray technology can be successfully applied to identify differentially expressed genes in human glioma. This approach is superior to routine representational difference analysis, suppression subtractive hybridization and Northern blot for detection and isolation of differentially expressed genes in different tissues. At present, we have discovered two novel full-length genes related to human glioma and their characterizations have been partially clarified.
- Published
- 2002
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