1. Tumour necrosis factor-{alpha} single nucleotide polymorphisms are not independent of HLA class I in UK Caucasians with adult onset idiopathic inflammatory myopathies
- Author
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Marriage, Fiona, Chinoy, H., Salway, F., John, S., Fertig, N., Tait, B. D., Oddis, C. V., Ollier, W. E R, and Cooper, R. G.
- Subjects
Male ,Adult ,Risk ,Genotype ,Neuroscience(all) ,TNF ,Single-nucleotide polymorphism ,Polymyositis ,Polymorphism, Single Nucleotide ,Linkage Disequilibrium ,Antibodies ,Dermatomyositis ,methods ,Rheumatology ,Gene Frequency ,medicine ,Humans ,Pharmacology (medical) ,Genetic Predisposition to Disease ,Myositis ,Alleles ,HLA-DQB1 ,business.industry ,Tumor Necrosis Factor-alpha ,Haplotype ,Histocompatibility Antigens Class I ,or ,Middle Aged ,medicine.disease ,Genotype frequency ,Cross-Sectional Studies ,Haplotypes ,Case-Control Studies ,Immunology ,Rna ,Female ,HLA, TNF-α ,business ,polymorphisms - Abstract
Objective. To investigate haplotype tagging single nucleotide polymorphisms (SNPs) in the tumour necrosis factor alpha (TNF-alpha) gene, in UK Caucasian idiopathic inflammatory myopathy (IIM) patients. Methods. A cross-sectional, case-control study of four TNF-alpha SNPs was undertaken, comparing cases of polymyositis (PM) (n = 121), dermatomyositis (DM) (n = 109) and myositis overlapping with other connective tissue diseases (CTD-overlap) (n = 73) with normal subjects (n = 177). Subgroup analyses were undertaken after stratifying for myositis specific/associated antibodies. Results. The TNF-308A allele demonstrated a strong association with each myositis disease subgroup vs controls [PM, odds ratio (OR) 2.8, 95% confidence interval 1.9-4.3; DM, OR 2.5, 1.6-3.8; CTD-overlap, OR 3.3, 2.1-5.1]. The TNF-308GA/AA genotype frequency was significantly increased vs controls (PM, OR 3.7, 2.1-6.3; DM, OR 3.2, 1.8-5.5; CTD-overlap, OR 5.0, 2.6-9.6) suggesting a dominant model. The association was strongest in patients possessing anti-aminoacyl transfer RNA synthetase (anti-synthetase) (OR 5.1, 3.3-8.0) or -PM-Scl (OR 5.0, 2.7-8.9) antibodies. The -1031T allele was also a significant risk factor in DM (OR 2.2, 1.4-3.6), anti-synthetase (OR 2.9, 1.6-5.3) and -PM-Scl (OR 5.6, 1.9-6.4) antibody positive patients. The TNF-308A association was lost after adjusting for HLA-B*08, but remained independent of HLA-DQB1*02 (both are alleles forming part of the common ancestral haplotype). The HLA-B*08/TNF-308A/DRB1*03/DQA1*05/DQB1*02 haplotype was a risk factor in all myositis subgroups vs controls (OR 3.0, 1.8-5.3). Conclusions. TNF-308A and -1031T alleles are significant risk factors in the IIMs. In the IIMs, the TNF-308A allele is part of the common ancestral haplotype, but is not independent of HLA-B*08 DA - 20070822IS - 1462-0324 (Print)LA - engPT - Journal ArticleSB - AIMSB - IM
- Published
- 2007
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