4 results on '"Szewczyk, Maciej"'
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2. Biochemical properties of the HtrA homolog from bacterium Stenotrophomonas maltophilia
- Author
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Zarzecka, Urszula, Modrak-Wojcik, Anna, Bayassi, Martyna, Szewczyk, Maciej, Gieldon, Artur, Lesner, Adam, Koper, Tomasz, Bzowska, Agnieszka, Sanguinetti, Maurizio, Backert, Steffen, Lipinska, Barbara, Skorko-Glonek, Joanna, and Pitocco, Dario
- Subjects
0301 basic medicine ,Models, Molecular ,Biochemical Phenomena ,Protein Conformation ,medicine.medical_treatment ,Stenotrophomonas maltophilia ,Substrate specificity ,030106 microbiology ,Plasma protein binding ,Chaperone ,medicine.disease_cause ,Biochemistry ,Settore MED/07 - MICROBIOLOGIA E MICROBIOLOGIA CLINICA ,03 medical and health sciences ,Enzyme activator ,Protein structure ,Bacterial Proteins ,Structural Biology ,Enzyme Stability ,medicine ,Oligomerization ,Amino Acid Sequence ,Escherichia coli ,Molecular Biology ,Serine protease ,Protease ,biology ,Chemistry ,Serine Endopeptidases ,Computational Biology ,General Medicine ,biology.organism_classification ,Enzyme Activation ,Chaperone (protein) ,Proteolysis ,biology.protein ,Protein Multimerization ,Molecular Chaperones ,Protein Binding - Abstract
The HtrA proteins due to their proteolytic, and in many cases chaperone activity, efficiently counteract consequences of stressful conditions. In the environmental bacterium and nosocomial pathogen Stenotrophomonas maltophilia HtrA (HtrASm) is induced as a part of adaptive response to host temperature (37°C). We examined the biochemical properties of HtrASm and compared them with those of model HtrAEc from Escherichia coli. We found that HtrASm is a protease and chaperone that operates over a wide range of pH and is highly active at temperatures between 35 and 37°C. The temperature-sensitive activity corresponded well with the lower thermal stability of the protein and weaker stability of the oligomer. Interestingly, the enzyme shows slightly different substrate cleavage specificity when compared to other bacterial HtrAs. A computational model of the three-dimensional structure of HtrASm indicates differences in the S1 substrate specificity pocket and suggests weaker inter-trimer interactions when compared to HtrAEc. The observed features of HtrASm suggest that this protein may play a protective role under stressful conditions acting both as a protease and a chaperone. The optimal temperatures for the protein activity may reflect the evolutionary adaptation of S. maltophilia to life in soil or aqueous environments, where the temperatures are usually much below 37°C.
- Published
- 2017
3. Decades of population genetic research reveal the need for harmonization of molecular markers: the grey wolf Canis lupus as a case study
- Author
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Arjen De Groot, G., Nowak, Carsten, Skrbinšek, Tomaz, Andersen, Liselotte W., Aspi, Jouni, Fumagalli, Luca, Godinho, Raquel, Harms, Verena, Jansman, Hughs A. H., Liberg, Olof, Marucco, Francesca, Myslajek, Rober W., Nowak, Sabina, Pilot, Malgorzata, Randi, Ettore, Reinhardt, Ilka, Smietana, Wojciech, Szewczyk, Maciej, Taberlet, Pierre, Vilà, Carles, Muñoz-Fuentes, Violeta, Government of the Netherlands, Leibniz Association, National Science Centre (Poland), Wolves and Humans Foundation, EuroNatur, and Ministry of Economic Affairs (The Netherlands)
- Subjects
Genetic monitoring ,Dierecologie ,Collaboration ,Recommendations ,Reference collection ,Transnational research ,Animal Ecology ,C170 Population Biology ,PE&RC - Abstract
Following protection measures implemented since the 1970s, large carnivores are currently increasing in number and returning to areas from which they were absent for decades or even centuries. Monitoring programmes for these species rely extensively on non-invasive sampling and genotyping. However, attempts to connect results of such studies at larger spatial or temporal scales often suffer from the incompatibility of genetic markers implemented by researchers in different laboratories. This is particularly critical for long-distance dispersers, revealing the need for harmonized monitoring schemes that would enable the understanding of gene flow and dispersal dynamics. Based on a review of genetic studies on grey wolves Canis lupus from Europe, we provide an overview of the genetic markers currently in use, and identify opportunities and hurdles for studies based on continent-scale datasets. Our results highlight an urgent need for harmonization of methods to enable transnational research based on data that have already been collected, and to allow these data to be linked to material collected in the future. We suggest timely standardization of newly developed genotyping approaches, and propose that action is directed towards the establishment of shared single nucleotide polymorphism panels, next-generation sequencing of microsatellites, a common reference sample collection and an online database for data exchange. Enhanced cooperation among genetic researchers dealing with large carnivores in consortia would facilitate streamlining of methods, their faster and wider adoption, and production of results at the large spatial scales that ultimately matter for the conservation of these charismatic species., The authors received financial support from the Dutch Ministry for Economic Affairs, the Swiss Federal Office for the Environment, the EuroNatur International Fund for Animal Welfare, Wolves and Humans Foundation, an IF Research contract from the Portuguese Science Foundation (FCT, IF/564/2012), grant SAW‐2011‐SGN‐3 of the Leibniz Association (Germany) and grant DEC‐2014/12/S/NZ8/00624 of the National Science Centre (Poland).
- Published
- 2015
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4. Upconversion fluorescence imaging of HeLa cells using ROS generating SiO2-coated lanthanide-doped NaYF4 nanoconstructs
- Author
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Kowalik, Przemyslaw, Elbaum, Danek, Mikulski, Jakub, Fronc, Krzysztof, Kaminska, Izabela, Morais, Paulo C., De Souza, Paulo Eduardo, Nunes, Rodrigo Barbosa, Veiga-Souza, Fabiane Hiratsuka, Gruzel, Grzegorz, Minikayev, Roman, Wojciechowski, Tomasz, Mosiniewicz-Szablewska, Ewa, Szewczyk, Maciej, Pawlyta, Miroslawa, Sienkiewicz, Andrzej, Lapinski, Mariusz, Zajdel, Karolina, Stepien, Piotr, Szczepkowski, Jacek, Jastrzebski, Wlodzimierz, Frontczak-Baniewicz, Malgorzata, Paszkowicz, Wojciech, and Sikora, Bozena
- Abstract
Inorganic nanomaterials able to generate reactive oxygen species (ROS) are promising components for modern medical applications. Activated by near-infrared light, up-converting beta-NaYF4 doped with Er3+ - Yb3+ and Tm3+- Yb3+ pair ions nanoparticles (UCNPs), have a wide range of applications in biological imaging as compared to traditional reagents excited by ultra-violet or visible light. We analysed the green-red and the blue-red luminescence to explain the mechanism of the upconversion depended on the surface condition. The influence of SiO2 coating on the cytotoxicity of the as-produced UCNPs towards HeLa cancer cells was reported. We demonstrated a possibility of a direct UCNPs application to photodynamic therapy, without need to attach additional molecules to their surface. The presence of Tm3+ - Yb3+ pair ions, thus ROS generation capability, renders the SiO2 shell coated nanoparticles to become potentially useful theranostic agent.
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