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8 results on '"Paschoal, Alexandre R."'

2. Additional file 1 of The nuclear and mitochondrial genomes of Frieseomelitta varia – a highly eusocial stingless bee (Meliponini) with a permanently sterile worker caste

Author

Freitas, Flávia C. De Paula, Lourenço, Anete P., Nunes, Francis M. F., Paschoal, Alexandre R., Abreu, Fabiano C. P., Barbin, Fábio O., Bataglia, Luana, Cardoso-Júnior, Carlos A. M., Cervoni, Mário S., Silva, Saura R., Dalarmi, Fernanda, Lama, Marco A. Del, Depintor, Thiago S., Ferreira, Kátia M., Gória, Paula S., Jaskot, Michael C., Lago, Denyse C., Luna-Lucena, Danielle, Moda, Livia M., Nascimento, Leonardo, Pedrino, Matheus, Oliveira, Franciene Rabiço, Sanches, Fernanda C., Santos, Douglas E., Santos, Carolina G., Vieira, Joseana, Barchuk, Angel R., Hartfelder, Klaus, Simões, Zilá L. P., Bitondi, Márcia M. G., and Pinheiro, Daniel G.

Abstract

Additional file 1 : Figure S1: Multiple alignment (A) and Maximum Parsimony phylogenetic tree (B) of miR-34.

Published
2020
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3. Additional file 11 of The nuclear and mitochondrial genomes of Frieseomelitta varia – a highly eusocial stingless bee (Meliponini) with a permanently sterile worker caste

Author

Freitas, Flávia C. De Paula, Lourenço, Anete P., Nunes, Francis M. F., Paschoal, Alexandre R., Abreu, Fabiano C. P., Barbin, Fábio O., Bataglia, Luana, Cardoso-Júnior, Carlos A. M., Cervoni, Mário S., Silva, Saura R., Dalarmi, Fernanda, Lama, Marco A. Del, Depintor, Thiago S., Ferreira, Kátia M., Gória, Paula S., Jaskot, Michael C., Lago, Denyse C., Luna-Lucena, Danielle, Moda, Livia M., Nascimento, Leonardo, Pedrino, Matheus, Oliveira, Franciene Rabiço, Sanches, Fernanda C., Santos, Douglas E., Santos, Carolina G., Vieira, Joseana, Barchuk, Angel R., Hartfelder, Klaus, Simões, Zilá L. P., Bitondi, Márcia M. G., and Pinheiro, Daniel G.

Abstract

Additional file 11 : Table S3 Mitochondrial genomes used for the Apoidea phylogenetic tree reconstruction. * denotes the species used as outgroups.

Published
2020
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4. Additional file 8 of The nuclear and mitochondrial genomes of Frieseomelitta varia – a highly eusocial stingless bee (Meliponini) with a permanently sterile worker caste

Author

Freitas, Flávia C. De Paula, Lourenço, Anete P., Nunes, Francis M. F., Paschoal, Alexandre R., Abreu, Fabiano C. P., Barbin, Fábio O., Bataglia, Luana, Cardoso-Júnior, Carlos A. M., Cervoni, Mário S., Silva, Saura R., Dalarmi, Fernanda, Lama, Marco A. Del, Depintor, Thiago S., Ferreira, Kátia M., Gória, Paula S., Jaskot, Michael C., Lago, Denyse C., Luna-Lucena, Danielle, Moda, Livia M., Nascimento, Leonardo, Pedrino, Matheus, Oliveira, Franciene Rabiço, Sanches, Fernanda C., Santos, Douglas E., Santos, Carolina G., Vieira, Joseana, Barchuk, Angel R., Hartfelder, Klaus, Simões, Zilá L. P., Bitondi, Márcia M. G., and Pinheiro, Daniel G.

Abstract

Additional file 8 : Figure S8 Unrooted phylogenetic trees for core set of genes of the JAK/STAT and RNAi pathways. Amino acid sequences were aligned using MAFFT and the tree was generated in an ML approach (1000 replicates). In red are the orthologs of Frieseomelitta varia. Gene names are abbreviated. Species names are in three letters acronyms, Acer: Apis cerana, Ador: Apis dorsata, Aflo: Apis florea, Amel: Apis mellifera, Bter: Bombus terrestris, Bimp: Bombus impatiens, Dnov: Dufourea novaeangliae, Edil: Euglossa dilemma, Emex: Eufriesea mexicana, Fvar: Frieseomelitta varia, Hlab: Habropoda laboriosa, Lalb: Lasioglossum albipes, Mrot: Megachile rotundata, Mqua: Melipona quadrifasciata.

Published
2020
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5. Additional file 9 of The nuclear and mitochondrial genomes of Frieseomelitta varia – a highly eusocial stingless bee (Meliponini) with a permanently sterile worker caste

Author

Freitas, Flávia C. De Paula, Lourenço, Anete P., Nunes, Francis M. F., Paschoal, Alexandre R., Abreu, Fabiano C. P., Barbin, Fábio O., Bataglia, Luana, Cardoso-Júnior, Carlos A. M., Cervoni, Mário S., Silva, Saura R., Dalarmi, Fernanda, Lama, Marco A. Del, Depintor, Thiago S., Ferreira, Kátia M., Gória, Paula S., Jaskot, Michael C., Lago, Denyse C., Luna-Lucena, Danielle, Moda, Livia M., Nascimento, Leonardo, Pedrino, Matheus, Oliveira, Franciene Rabiço, Sanches, Fernanda C., Santos, Douglas E., Santos, Carolina G., Vieira, Joseana, Barchuk, Angel R., Hartfelder, Klaus, Simões, Zilá L. P., Bitondi, Márcia M. G., and Pinheiro, Daniel G.

Abstract

Additional file 9 : Table S1 Genome databases used in blastp searches for protein-coding genes included in the gene set for manual curation of their MAKER 2 gene model predictions.

Published
2020
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6. Additional file 10 of The nuclear and mitochondrial genomes of Frieseomelitta varia – a highly eusocial stingless bee (Meliponini) with a permanently sterile worker caste

Author

Freitas, Flávia C. De Paula, Lourenço, Anete P., Nunes, Francis M. F., Paschoal, Alexandre R., Abreu, Fabiano C. P., Barbin, Fábio O., Bataglia, Luana, Cardoso-Júnior, Carlos A. M., Cervoni, Mário S., Silva, Saura R., Dalarmi, Fernanda, Lama, Marco A. Del, Depintor, Thiago S., Ferreira, Kátia M., Gória, Paula S., Jaskot, Michael C., Lago, Denyse C., Luna-Lucena, Danielle, Moda, Livia M., Nascimento, Leonardo, Pedrino, Matheus, Oliveira, Franciene Rabiço, Sanches, Fernanda C., Santos, Douglas E., Santos, Carolina G., Vieira, Joseana, Barchuk, Angel R., Hartfelder, Klaus, Simões, Zilá L. P., Bitondi, Márcia M. G., and Pinheiro, Daniel G.

Abstract

Additional file 10 : Table S2 Genome databases used in the prediction of non-coding genes in the F. varia genome assembly.

Published
2020
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7. Additional file 7 of The nuclear and mitochondrial genomes of Frieseomelitta varia – a highly eusocial stingless bee (Meliponini) with a permanently sterile worker caste

Author

Freitas, Flávia C. De Paula, Lourenço, Anete P., Nunes, Francis M. F., Paschoal, Alexandre R., Abreu, Fabiano C. P., Barbin, Fábio O., Bataglia, Luana, Cardoso-Júnior, Carlos A. M., Cervoni, Mário S., Silva, Saura R., Dalarmi, Fernanda, Lama, Marco A. Del, Depintor, Thiago S., Ferreira, Kátia M., Gória, Paula S., Jaskot, Michael C., Lago, Denyse C., Luna-Lucena, Danielle, Moda, Livia M., Nascimento, Leonardo, Pedrino, Matheus, Oliveira, Franciene Rabiço, Sanches, Fernanda C., Santos, Douglas E., Santos, Carolina G., Vieira, Joseana, Barchuk, Angel R., Hartfelder, Klaus, Simões, Zilá L. P., Bitondi, Márcia M. G., and Pinheiro, Daniel G.

Abstract

Additional file 7 : Figure S7 Unrooted phylogenetic trees for core set of genes of the Toll (A) and IMD/JNK pathways. Amino acid sequences were aligned using MAFFT and the tree was generated in an ML approach (1000 replicates). In red are the orthologs of Frieseomelitta varia. Gene names are abbreviated. Species names are in three letters acronyms, Acer: Apis cerana, Ador: Apis dorsata, Aflo: Apis florea, Amel: Apis mellifera, Bter: Bombus terrestris, Bimp: Bombus impatiens, Dnov: Dufourea novaeangliae, Edil: Euglossa dilemma, Emex: Eufriesea mexicana, Fvar: Frieseomelitta varia, Hlab: Habropoda laboriosa, Lalb: Lasioglossum albipes, Mrot: Megachile rotundata, Mqua: Melipona quadrifasciata.

Published
2020
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8. Additional file 12 of The nuclear and mitochondrial genomes of Frieseomelitta varia – a highly eusocial stingless bee (Meliponini) with a permanently sterile worker caste

Author

Freitas, Flávia C. De Paula, Lourenço, Anete P., Nunes, Francis M. F., Paschoal, Alexandre R., Abreu, Fabiano C. P., Barbin, Fábio O., Bataglia, Luana, Cardoso-Júnior, Carlos A. M., Cervoni, Mário S., Silva, Saura R., Dalarmi, Fernanda, Lama, Marco A. Del, Depintor, Thiago S., Ferreira, Kátia M., Gória, Paula S., Jaskot, Michael C., Lago, Denyse C., Luna-Lucena, Danielle, Moda, Livia M., Nascimento, Leonardo, Pedrino, Matheus, Oliveira, Franciene Rabiço, Sanches, Fernanda C., Santos, Douglas E., Santos, Carolina G., Vieira, Joseana, Barchuk, Angel R., Hartfelder, Klaus, Simões, Zilá L. P., Bitondi, Márcia M. G., and Pinheiro, Daniel G.

Subjects
Data_GENERAL
Abstract

Additional file 12 : Table S4 Results of the manual curation of 533 gene models generated by automatic prediction.

Published
2020
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