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This study investigates the nature and changes of Human Resource Development (HRD) in two Greek banks under the challenging context of the economic crisis. It examines the latter’s impact upon HRD as it was perceived from different stakeholders and through a pre and ongoing-crisis assessment approach. \ud \ud The study draws upon qualitative research data from two case study banking organisations in Greece, reporting on 76 semi-structured interviews with key stakeholders (HR staff, Bank Managers, employees) undertaken in 2014, six (6) years after the fall of Lehman Brothers. \ud The study contributes to academic knowledge as being the first empirical research offering a unique perspective through examining changes of HRD within a specific industry and national context (Greek banks) against a backdrop of an economic downturn. Its findings also raise important questions for HRD professionals, in both academia and practice in relation to claims and aspirations which prevail in respect of HRD and organisational change and business transformation.

The Clothing Longevity Protocol offers guidelines for good practice in order to aid moves towards garments that will last longer and thus to help protect brand value, screen out garments which fail prematurely and reduce the environmental impact of the clothing sector.

International audience; Cognitive-Behavioural Therapy (CBT) is considered the ‘gold standard’ in the treatment of addictive disorders related to excessive technology use. However, the cognitive components of problematic internet use are not yet well-known. The aim of the present study was to explore the cognitive components, that according to problematic users, can lead to potential internet addiction. A total of 854 European adults completed an online survey using a mixed-methods design. Internet problems and attachment styles were assessed, prevalence rates estimated, correlations, chi-squared automatic interaction detection, and content analysis were performed. Self-reported addictions to social networking, internet, and gaming had a prevalence between 1.2% (gaming) to 2.7% (social networking). Self-perception of the addiction problem and preoccupied attachment style were discriminative factors for internet addiction. In an analysis of qualitative responses from self-identified compulsive internet users, a sense of not belonging and feeling of disconnection during life events were perceived as causes for internet addiction. The development depended on a cycle of mixed feelings associated with negative thoughts, compensated by a positive online identity. The severity of this behaviour pattern produced significant impairment in various areas of the participants’ functioning, suggesting a possible addiction problem. It is suggested that health professionals administering CBT should target unhealthy preoccupations and monitor mixed feelings and thoughts related to internet use to support coping with cognitive distortions.

International audience; Intermittent rivers and ephemeral streams (IRES) – waterways in which flow ceases periodically or that dry completely – are found worldwide, and their frequency and extent are expected to increase in the future in response to global climate change and growing anthropogenic demand for fresh water. Repeated wet–dry cycles generate highly dynamic settings within river networks composed of aquatic and terrestrial habitats, which act as evolutionary triggers for aquatic and terrestrial biota. Drying also alters functions and processes within river networks, with consequences for ecosystem services. Despite the emergence of promising conceptual and methodological developments, our understanding of the occurrence and diversity of organisms in these ecosystems is limited primarily due to their coupled aquatic–terrestrial characteristics. Novel genomic tools based on high-throughput sequencing have the potential to tackle unanswered questions of pivotal importance to predict future change in IRES. Here, we outline why genomic tools are needed to assess these dynamic ecosystems from the population to the metacommunity scale, and their potential role in bridging ecological–evolutionary dynamics.

[Background]: The gut microbiome and iron status are known to play a role in the pathophysiology of non-alcoholic fatty liver disease (NAFLD), although their complex interaction remains unclear., [Results]: Here, we applied an integrative systems medicine approach (faecal metagenomics, plasma and urine metabolomics, hepatic transcriptomics) in 2 well-characterised human cohorts of subjects with obesity (discovery n = 49 and validation n = 628) and an independent cohort formed by both individuals with and without obesity (n = 130), combined with in vitro and animal models. Serum ferritin levels, as a markers of liver iron stores, were positively associated with liver fat accumulation in parallel with lower gut microbial gene richness, composition and functionality. Specifically, ferritin had strong negative associations with the Pasteurellaceae, Leuconostocaceae and Micrococcaea families. It also had consistent negative associations with several Veillonella, Bifidobacterium and Lactobacillus species, but positive associations with Bacteroides and Prevotella spp. Notably, the ferritin-associated bacterial families had a strong correlation with iron-related liver genes. In addition, several bacterial functions related to iron metabolism (transport, chelation, heme and siderophore biosynthesis) and NAFLD (fatty acid and glutathione biosynthesis) were also associated with the host serum ferritin levels. This iron-related microbiome signature was linked to a transcriptomic and metabolomic signature associated to the degree of liver fat accumulation through hepatic glucose metabolism. In particular, we found a consistent association among serum ferritin, Pasteurellaceae and Micrococcacea families, bacterial functions involved in histidine transport, the host circulating histidine levels and the liver expression of GYS2 and SEC24B. Serum ferritin was also related to bacterial glycine transporters, the host glycine serum levels and the liver expression of glycine transporters. The transcriptomic findings were replicated in human primary hepatocytes, where iron supplementation also led to triglycerides accumulation and induced the expression of lipid and iron metabolism genes in synergy with palmitic acid. We further explored the direct impact of the microbiome on iron metabolism and liver fact accumulation through transplantation of faecal microbiota into recipient’s mice. In line with the results in humans, transplantation from ‘high ferritin donors’ resulted in alterations in several genes related to iron metabolism and fatty acid accumulation in recipient’s mice., [Conclusions]: Altogether, a significant interplay among the gut microbiome, iron status and liver fat accumulation is revealed, with potential significance for target therapies., This work was supported by EU-FP7 FLORINASH (Health-F2-2009-241913) to R.B., M.F., J.M.F.R., E.H. and J.K.N. Infrastructure support was provided by the National Institute for Health Research (NIHR) Imperial Biomedical Research Centre (BRC). L.H. was in receipt of an MRC Intermediate Research Fellowship in Data Science (grant number MR/L01632X/1, UK Med-Bio). This work was also partly supported by funding to M.-E.D. (EU METACARDIS under agreement HEALTH-F4-2012-305312, Neuron II under agreement 291840 and the MRC MR/M501797/1) and by grants from the French National Research Agency (ANR-10-LABX-46 [European Genomics Institute for Diabetes]), from the National Center for Precision Diabetic Medicine – PreciDIAB, which is jointly supported by the French National Agency for Research (ANR-18-IBHU-0001), by the European Union (FEDER), by the Hauts-de-France Regional Council (Agreement 20001891/NP0025517) and by the European Metropolis of Lille (MEL, Agreement 2019_ESR_11) and by Isite ULNE (R-002-20-TALENT-DUMAS), also jointly funded by ANR (ANR-16-IDEX-0004-ULNE) the Hauts-de-France Regional Council (Agreement 20002045) and by the European Metropolis of Lille (MEL). J.M.-P. is funded by the Miguel Servet Program from the Instituto de Salud Carlos III (ISCIII CP18/00009), co-funded by the European Social Fund ‘Investing in your future’. María Arnoriaga Rodríguez is funded by a predoctoral Río Hortega contract (CM19/00190, co-funded by European Social Fund ‘Investing in your future’) from the Instituto de Salud Carlos III, Spain. This work was supported by grants to AM from the Spanish Ministry of Science and Innovation (PID2019-105969GB-I00) and Generalitat Valenciana (project Prometeo/2018/133).

Accurately quantifying species’ area requirements is a prerequisite for effective area‐based conservation. This typically involves collecting tracking data on species of interest and then conducting home‐range analyses. Problematically, autocorrelation in tracking data can result in space needs being severely underestimated. Based on the previous work, we hypothesized the magnitude of underestimation varies with body mass, a relationship that could have serious conservation implications. To evaluate this hypothesis for terrestrial mammals, we estimated home‐range areas with global positioning system (GPS) locations from 757 individuals across 61 globally distributed mammalian species with body masses ranging from 0.4 to 4000 kg. We then applied block cross‐validation to quantify bias in empirical home‐range estimates. Area requirements of mammals 1, meaning the scaling of the relationship changed substantially at the upper end of the mass spectrum., Article impact statement: Due to autocorrelation‐induced bias, conventional methods severely underestimate the area requirements of GPS‐tracked large mammals.

International audience; The role of the assessment of peripheral T-cell phenotypes in predicting overall survival (OS) after ipilimumab treatment is unclear. Here, we analysed mononuclear cells in the blood before and at different time points during treatment with ipilimumab in 137 late-stage melanoma patients. The proportions of baseline naïve and memory T-cells were measured by flow cytometry and correlated with OS, with an emphasis on PD-1 expression. High frequencies (>13%) of CD8 effector-memory type 1 (EM1) T-cells at baseline correlated with longer OS (p = 0.029) and higher clinical response rates (p = 0.01). The frequency of these EM1 cells and the M category had independent impacts on OS (hazard ratio = 1.5, p = 0.033; and hazard ratio = 1.9, p = 0.007). In contrast, high baseline frequencies of late stage-differentiated effector memory CD8 cells (>23.8%) were negatively associated with OS (p = 0.034) but did not correlate with clinical response. Following treatment, a decrease of CD8 cells from baseline to the time of the second drug dose and at later time points was strongly and consistently correlated with a high clinical response rate. Our observations thus suggest an important predictive role of baseline CD8 EM1 cells and changes in CD8 cells for clinical response of ipilimumab. Further validation of these biomarker candidates is warranted.

Probiotic yogurt and milk supplemented with probiotics have been investigated for their role in ‘low-grade’ inflammation but evidence for their efficacy is inconclusive. This study explores the impact of probiotic yogurt on metabolic and inflammatory biomarkers, with a parallel study of gut microbiota dynamics. The randomised cross-over study was conducted in fourteen healthy, young men to test probiotic yogurt compared with milk acidified with 2 % d-(+)-glucono-δ-lactone during a 2-week intervention (400 g/d). Fasting assessments, a high-fat meal test (HFM) and microbiota analyses were used to assess the intervention effects. Baseline assessments for the HFM were carried out after a run-in during which normal milk was provided. No significant differences in the inflammatory response to the HFM were observed after probiotic yogurt compared with acidified milk intake; however, both products were associated with significant reductions in the inflammatory response to the HFM compared with the baseline tests (assessed by IL6, TNFα and chemokine ligand 5) (PBilophila wadsworthia after acidified milk (log 2-fold-change (FC)=–1·5, Padj=0·05) and probiotic yogurt intake (FC=–1·3, Padj=0·03), increased abundance of Bifidobacterium species after acidified milk intake (FC=1·4, Padj=0·04) and detection of Lactobacillus delbrueckii spp. bulgaricus (FC=7·0, PadjStreptococcus salivarius spp. thermophilus (FC=6·0, Padj

International audience; Background: The present study compared adult usage patterns of online activities, the frequency rate of problematic internet use (PIU), and risk factors (including the psychopathology associated with PIU, i.e., distress and impulsivity) among adults in 15 countries from Europe, America, and Asia. Methods: A total of 5130 adults from Belgium, Finland, Germany, Italy, Spain, France, Switzerland, Hungary, Poland, UK, Norway, Peru, Canada, US, and Indonesia completed an online survey assessing PIU and a number of psychological variables (i.e., depression, anxiety, stress, and impulsivity). The sample included more females, with a mean age of 24.71 years (SD = 8.70). Results: PIU was slightly lower in European countries (rates ranged from 1.1% in Finland to 10.1% in the UK, compared to 2.9% in Canada and 10.4% in the US). There were differences in specific PIU rates (e.g., problematic gaming ranged from 0.4% in Poland to 4.7% in Indonesia). Regression analyses showed that PIU was predicted by problematic social networking and gaming, lack of perseverance, positive urgency, and depression. Conclusions: The differences in PIU between countries were significant for those between continental regions (Europe versus non-European countries). One of the most interesting findings is that the specific PIU risks were generally low compared to contemporary literature. However, higher levels of PIU were present in countries outside of Europe, although intra-European differences existed.

Adolescents; COVID-19; Remote assessment Adolescents; COVID-19; Avaluació a distància Adolescentes; COVID-19; Evaluación a distancia The COVID-19 pandemic led ADHD services to modify the clinical practice to reduce in-person contact as much as possible to minimise viral spread. This had far-reaching effects on day-to-day clinical practice as remote assessments were widely adopted. Despite the attenuation of the acute threat from COVID, many clinical services are retaining some remote practices. The lack of clear evidence-based guidance about the most appropriate way to conduct remote assessments meant that these changes were typically implemented in a localised, ad hoc, and un-coordinated way. Here, the European ADHD Guidelines Group (EAGG) discusses the strengths and weaknesses of remote assessment methods of children and adolescents with ADHD in a narrative review based on available data and expert opinions to highlight key recommendations for future studies and clinical practice. We conclude that going forward, despite remote working in clinical services functioning adequately during the pandemic, all required components of ADHD assessment should still be completed following national/international guidelines; however, the process may need adaptation. Social restrictions, including changes in education provision, can either mask or exacerbate features associated with ADHD and therefore assessment should carefully chart symptom profile and impairment prior to, as well as during an ongoing pandemic. While remote assessments are valuable in allowing clinical services to continue despite restrictions and may have benefits for routine care in the post-pandemic world, particular attention must be paid to those who may be at high risk but not be able to use/access remote technologies and prioritize these groups for conventional face-to-face assessments.

Objective:To explore communities’ perspectives on the factors in the social food environment that influence dietary behaviours in African cities.Design:A qualitative study using participatory photography (Photovoice). Participants took and discussed photographs representing factors in the social food environment that influence their dietary behaviours. Follow-up in-depth interviews allowed participants to tell the ‘stories’ of their photographs. Thematic analysis was conducted, using data-driven and theory-driven (based on the socio-ecological model) approaches.Setting:Three low-income areas of Nairobi (n 48) in Kenya and Accra (n 62) and Ho (n 32) in Ghana.Participants:Adolescents and adults, male and female aged ≥13 years.Results:The ‘people’ who were most commonly reported as influencers of dietary behaviours within the social food environment included family members, friends, health workers and food vendors. They mainly influenced food purchase, preparation and consumption, through (1) considerations for family members’ food preferences, (2) considerations for family members’ health and nutrition needs, (3) social support by family and friends, (4) provision of nutritional advice and modelling food behaviour by parents and health professionals, (5) food vendors’ services and social qualities.Conclusions:The family presents an opportunity for promoting healthy dietary behaviours among family members. Peer groups could be harnessed to promote healthy dietary behaviours among adolescents and youth. Empowering food vendors to provide healthier and safer food options could enhance healthier food sourcing, purchasing and consumption in African low-income urban communities.

Visual perspective during memory retrieval has mainly been evaluated with methodologies based on introspection and subjective reports. The current study investigates whether visual perspective can be evaluated with a physiological measurement: pupil dilation. While their pupil diameter was measured with an eye-tracker, forty-five participants retrieved one memory from a field perspective (i.e., as viewed through our own eyes) and one memory from an observer perspective (i.e., as viewed from a spectator’s standpoint). After retrieval, participants rated the emotional intensity of the memories. Analysis demonstrated larger pupils during the retrieval of memories from a field perspective and higher emotional intensity for memories retrieved from a field perspective. The larger pupils for memories recalled from a field perspective could, however, not be attributed to their higher emotional intensity. These findings suggest that pupil dilation could be used as a physiological assessment of visual perspective during memory retrieval.

Mindfulness attracted increased research interests in the last decade, reporting an overall beneficial effect of this practice on cognitive performances. Nevertheless, recently a possible detrimental impact of mindfulness has been underlined. While the effect of mindfulness on memory remains under-explored, recent studies have observed an increased false-memory susceptibility after mindfulness practice. A possible explanatory mechanism has been suggested, related to the nature of the studied material. For semantically related information, mindfulness would increase false memories; however, the addition of rich perceptual information could prevent this detrimental effect. The present study aimed to verify this hypothesis by testing the impact of state mindfulness induced by a short meditation session, and dispositional mindfulness on the production of false memory for pictorial material presented in a complex virtual environment. We employed a virtual reality version of the Deese–Roediger–McDermott paradigm (DRM), a classical protocol to induce false memories. Contrary to previous studies, we did not observe any effect of mindfulness on false or correct memories (free recall and recognition) after a short mindfulness practice session compared to a control condition. Nonetheless, we found a beneficial effect of mindfulness practice on memory sensitivity. Additionally, we reported a positive and negative effect of dispositional mindfulness on memory outcomes. While the Non-Reactivity facet was associated with overall better memory performances, we observed an association between the Acting with Awareness facet and an increased recollection of lures. We discuss these findings in line with a recent proposal on the link between mindfulness and episodic memory.

International audience; Joint sparse representation (JSR) model has recently emerged as a powerful technique with wide variety of applications. In this paper, the JSR model is extended to error concealment (EC) application, being effective to recover the original image from its corrupted version. This model is based on jointly learning a dictionary pair and two mapping matrices that are trained offline from external training images. Given the trained dictionaries and mappings, the restoration is done by transferring the recovery problem into the sparse representation domain with respect to the trained dictionaries, which is further transformed into a common space using the respective mapping matrices. Then, the reconstructed image is obtained by back projection into the spatial domain. In order to improve the accuracy and stability of the proposed JSR-based EC algorithm and avoid unexpected artifacts, the local and non-local priors are seamlessly integrated into the JSR model. The non-local prior is based on the self-similarity within natural images and helps to find an accurate sparse representation by taking a weighted average of similar areas throughout the image. The local prior is based on learning the local structural regularity of the natural images and helps to regularize the sparse representation, exploiting the strong correlation in the small local areas within the image. Compared with the state-of-the-art EC algorithms, the results show that the proposed method has better reconstruction performance in terms of objective and subjective evaluations.

Rapid shifts in biotic communities due to environmental variability challenge the detection of anthropogenic impacts by current biomonitoring programs. Metacommunity ecology has the potential to inform such programs, because it combines dispersal processes with niche-based approaches and recognizes variability in community composition. Using intermittent rivers—prevalent and highly dynamic ecosystems that sometimes dry—we develop a conceptual model to illustrate how dispersal limitation and flow intermittence influence the performance of biological indices. We produce a methodological framework integrating physical- and organismal-based dispersal measurements into predictive modeling, to inform development of dynamic ecological quality assessments. Such metacommunity-based approaches could be extended to other ecosystems and are required to underpin our capacity to monitor and protect ecosystems threatened under future environmental changes.

Made available in DSpace on 2022-04-29T08:38:04Z (GMT). No. of bitstreams: 0 Previous issue date: 2022-03-01 Tortoise husbandry includes reports of excessive growth and carapace pyramiding, although triggers still remain to be fully elucidated. Juvenile red-footed tortoises (Chelonoidis carbonaria) were fed with two different diets, one high in fiber (HF; 14.2% crude fiber; 39.2% neutral detergent fiber, NDF; dry matter basis, DMB) and one high in starch (HS; 27.7% DMB), to assess effects on energy metabolism, nutrient digestibility, and growth. A total of 20 hatchlings (10 per diet) were used to evaluate: apparent digestibility coefficients (Da) of nutrients and gross energy (GE), passage times at 5 and 11 months of age; resting and post-prandial metabolic rates at 6 and 12 months of age; growth rates; pyramiding; and estimated body composition. Animals fed HS showed higher mass-specific intake of digestible energy (113.9 ± 32.1 kJ kg−1 day−1 vs. 99.6 ± 35.3 kJ kg−1 day−1; P < 0.05), digestible DM (6.1 ± 1.8 g kg−1 day−1 vs. 5.0 ± 1.8 g kg−1 day−1; P < 0.01), shorter transit (3 ± 1 days vs. 4 ± 1 days; P < 0.01) and retention times (8 ± 2 days vs. 10 ± 2 days; P < 0.01), and higher Da of DM, starch, NDF, and GE. Crude protein Da was higher for HF. Rest and post-prandial metabolic rates, and pyramiding degree were not affected by diets. At 13 months, the animals from HS presented wider plastrons and carapaces, and higher carapace width growth rates. In addition, these animals had lower body mineral content (1.88 ± 0.15% vs. 2.15 ± 0.19%; P < 0.01) and bone density (0.13 ± 0.01 g mm−2 vs. 0.15 ± 0.02 g mm−2; P < 0.02). Results provide evidence that highly digestible foods can accelerate shell growth and lower mineralization in this species. Department of Animal Science São Paulo State University (UNESP) School of Agricultural and Veterinarian Sciences, Jaboticabal Wildhunger-Wildlife Nutrition Advisory Department of Biology Sciences São Paulo State University (UNESP) School of Agricultural and Veterinarian Sciences, Jaboticabal Department of Biological and Environmental Sciences University of Gothenburg Department of Animal Morphology and Physiology São Paulo State University (UNESP) School of Agricultural and Veterinarian Sciences, Jaboticabal School of Animal Rural and Environmental Sciences Nottingham Trent University Zootrition Consulting Department of Veterinary Clinic and Surgery São Paulo State University (UNESP) School of Agricultural and Veterinarian Sciences, Jaboticabal Department of Animal Science São Paulo State University (UNESP) School of Agricultural and Veterinarian Sciences, Jaboticabal Department of Biology Sciences São Paulo State University (UNESP) School of Agricultural and Veterinarian Sciences, Jaboticabal Department of Animal Morphology and Physiology São Paulo State University (UNESP) School of Agricultural and Veterinarian Sciences, Jaboticabal Department of Veterinary Clinic and Surgery São Paulo State University (UNESP) School of Agricultural and Veterinarian Sciences, Jaboticabal

Objective: Metabolic syndrome, obesity, and steatosis are characterized by a range of dysregulations including defects in ubiquitin ligase tagging proteins for degradation. The identification of novel hepatic genes associated with fatty liver disease and metabolic dysregulation may be relevant to unravelling new mechanisms involved in liver disease progression Methods: Through integrative analysis of liver transcriptomic and metabolomic obtained from obese subjects with steatosis, we identified itchy E ubiquitin protein ligase (ITCH) as a gene downregulated in human hepatic tissue in relation to steatosis grade. Wild-type or ITCH knockout mouse models of non-alcoholic fatty liver disease (NAFLD) and obesity-related hepatocellular carcinoma were analyzed to dissect the causal role of ITCH in steatosis Results: We show that ITCH regulation of branched-chain amino acids (BCAAs) degradation enzymes is impaired in obese women with grade 3 compared with grade 0 steatosis, and that ITCH acts as a gatekeeper whose loss results in elevation of circulating BCAAs associated with hepatic steatosis. When ITCH expression was specifically restored in the liver of ITCH knockout mice, ACADSB mRNA and protein are restored, and BCAA levels are normalized both in liver and plasma Conclusions: Our data support a novel functional role for ITCH in the hepatic regulation of BCAA metabolism and suggest that targeting ITCH in a liver-specific manner might help delay the progression of metabolic hepatic diseases and insulin resistance.

Made available in DSpace on 2022-04-28T19:48:21Z (GMT). No. of bitstreams: 0 Previous issue date: 2022-02-01 Every year, a considerable volume of medications is consumed. Because these medications are not entirely eliminated in the sewage treatment plants and impact the surface waterways, the environmental pollution problem arises. This study objective was to evaluate the possibility of using an absorbent material made with of polyethylene terephthalate and sugarcane bagasse ash functionalized with iron oxide (PETSCA/Fe3+) in the removal of naproxen from water. The feasibility of having viable features in becoming an efficient adsorbent was first determined. The batch test was performed, allowing the dose effect, adsorption kinetics, and isotherm models to be evaluated. The determination of naproxen (NAP) concentration in water was analyzed on a high-performance liquid chromatograph and Langmuir method best represented the adsorption isotherm model. PETSCA/Fe3+ adsorbent material demonstrated potential in the naproxen removal at a low cost. The batching process was satisfactory, with 0.30 g of composite being the optimum fit for the system. The adsorption kinetics was determined and described by the pseudo second order model, with an average correlation coefficient (R2) of 0.974. The adsorption system model was best represented by the Langmuir isotherm curve. Moreover, adsorption in the presence of H2O2 had a positive impact on the process, removing 81.9% of NAP, whereas the process without H2O2 did not remove more than 62.0% of NAP. Therefore, because of its good qualities for NAP removal, PETSCA/Fe3+ is recommended as adsorbent material, primarily in small-volume water filtration systems. School of Engineering São Paulo State University (UNESP), Ave. Brasil Sul, Number 56, ZIP Code 15385-000 Brazil University, Street Carolina Fonseca, Number 584, ZIP Code 08230-030 Graduate Program in Process Engineering Tiradentes University, Ave. Murilo Dantas, Number 300, ZIP Code 49032-490 Institute of Technology and Research, Ave. Murilo Dantas, 300, Farolândia Department of Engineering School of Science and Technology Nottingham Trent University Waste Re-processing Division CSIR-National Environmental Engineering Research Institute (CSIR-NEERI), Nehru Marg Department of Botany School of Life Sciences Guru Ghasidas Vishwavidyalaya (A Central University) School of Engineering São Paulo State University (UNESP), Ave. Brasil Sul, Number 56, ZIP Code 15385-000

International audience; As complex mosaics of lotic, lentic, and terrestrial habitats, intermittent rivers and ephemeral streams (IRES) sup-port high biodiversity. Despite their ecological importance, IRES are poorly represented in routine monitoring programs, but recent recognition of their considerable-and increasing-spatiotemporal extent is motivating ef-forts to better represent IRES in ecological status assessments. We examine response patterns of aquatic macro-invertebrate communities and taxa to flow intermittence (FI) across three European climatic regions. We used self-organizing map (SOM) to ordinate and classify sampling sites based on community structure in regions with continental, Mediterranean and oceanic climates. The SOM passively introduced FI, quantified as the mean annual % flow, and visualized its variability across classified communities, revealing a clear association be-tween community structure and FI in all regions. Indicator species analysis identified taxa indicative of low, inter-mediate and high FI. In the continental region, the amphipod Niphargus was indicative of high FI and was associated with groundwater-fed IRES, whereas indicators of Mediterranean IRES comprised Odonata, Coleop-tera and Heteroptera taxa, which favor lentic conditions. In the oceanic region, taxa indicative of relatively high FI included leuctrid stoneflies anda limnephilid caddisfly, likely reflecting the colonization of IRES by aerial adults from nearby perennial reaches. The Diptera families Chironomidae and Simuliidae showed contrasting FI preferences among regions, reflecting environmental heterogeneity between regions and the coarse taxonomic resolution to which these organisms were identified. These region-specific community and taxon responses of aquatic biota to FI highlight the need to adapt standard biotic indices to enable effective ecological status assessments in IRES.

International audience; Tetracycline (TC) is one of the antibiotics that is found in wastewaters. TC is toxic, carcinogenic, and teratogenic. In this study, the tetracycline was removed from water by adsorption using dioxide silicon nanoparticles (SiO2 NPs) biosynthesized from the extract of Nerium oleander leaves. These nanoparticles were characterized using SEM-EDX, BET-BJH, FTIR-ATR, TEM, and XRD. The influences of various factors such as pH solution, SiO2 NPs dose, adsorption process time, initial TC concentration, and ionic strength on adsorption behaviour of TC onto SiO2 NPs were investigated. TC adsorption on SiO2 NPs could be well described in the pseudo-second-order kinetic model and followed the Langmuir isotherm model with a maximum adsorption capacity was 552.48 mg/g. At optimal conditions, the experimental adsorption results indicated that the SiO2 NPs adsorbed 98.62% of TC. The removal of TC using SiO2 NPs was 99.56% at conditions (SiO2 NPs dose = 0.25 g/L, C0 = 25 mg/L, and t = 40 min) based on Box-Behnken design (BBD) combined with response surface methodology (RSM) modelling. Electrostatic interaction governs the adsorption mechanism is attributed. The reusability of SiO2 NPs was tested, and the performance adsorption was 85.36% after the five cycles. The synthesized SiO2 NPs as promising adsorbent has a potential application for antibiotics removal from wastewaters.

BackgroundIn response to the Covid-19 pandemic, most countries implemented physical distancing measures. Many mental health experts warned that through increasing social isolation and anxiety, these measures could negatively affect psychosocial wellbeing. However, socially aligning with others by adhering to these measures may also be beneficial for wellbeing.MethodsWe examined these two contrasting hypotheses using cross-national survey data (N = 6675) collected fortnightly from participants in 115 countries over 3 months at the beginning of the pandemic. Participants reported their wellbeing, perceptions of how vulnerable they were to Covid-19 (i.e., high risk of infection) and how much they, and others in their social circle and country, were adhering to the distancing measures.ResultsLinear mixed-effects models showed that being a woman, having lower educational attainment, living alone and perceived high vulnerability to Covid-19 were risk factors for poorer wellbeing. Being young (18–25) was associated with lower wellbeing, but longitudinal analyses showed that young people’s wellbeing improved over 3 months. In contrast to widespread views that physical distancing measures negatively affect wellbeing, results showed that following the guidelines was positively associated with wellbeing even for people in high-risk groups.ConclusionsThese findings provide an important counterpart to the idea that pandemic containment measures such as physical distancing negatively impacted wellbeing unequivocally. Despite the overall burden of the pandemic on psychosocial wellbeing, social alignment with others can still contribute to positive wellbeing. The pandemic has manifested our propensity to adapt to challenges, particularly highlighting how social alignment can forge resilience.

Made available in DSpace on 2022-04-28T19:52:48Z (GMT). No. of bitstreams: 0 Previous issue date: 2022-01-01 The use of treated wastewater (TWW) for crop irrigation is practiced in many countries worldwide as a strategy to offset water scarcity. Soil quality assessment is required to ensure that the application of this non-conventional irrigation water is sustainable over long periods. A relatively limited number of studies have used soil quality indexing approaches to investigate the impacts of TWW irrigation on soil quality. Therefore, this study aimed to assess the impacts of more than three decades of TWW irrigation on Fluvisol in semi-arid agrosystem to develop soil quality indices and evaluate their use as a practical tool to support TWW irrigation management. Overall, a total of 13 key soil attributes, used as soil quality indicators, were monitored in three TWW-irrigated plots and their adjacent non-irrigated control in eastern Tunisia. These selected indicators were used to develop a soil quality index (SQI) based on either a total data set (SQI-TDS) or a minimum data set (SQI-MDS) indexing approach. In comparison to the control, TWW application significantly increased saturated hydraulic conductivity (Ks) (+740%), saturation percentage (SP) (+20%), aggregate stability (AS) (+64%), field capacity (FC) (+52), electrical conductivity (EC) (+72%), phosphorous (P) (+472%), potassium (K) (+43%), organic matter (OM) (+90%) and basal respiration (BMR) (+117%) and decreased hydrophobicity (−17%), bulk density (BD) (−13%), cone penetration resistance (CPT) (−17%) and pH (−4%). The two developed SQI-TDS and SQI-MDS indices were sensitive to distinguish the impacts of TWW irrigation on soil quality in the study area. In comparison to the control, the TWW-irrigated soils exhibited higher SQI ratings by 42 and 52% based on SQI-MDS and SQI-TDS, respectively. Based on the monitored soil quality indicators in TWW-irrigated and control plots, this study indicates that long-term TWW application improved the overall soil quality and supports SQI-MDS's efficiency in providing an adequate evaluation of soil quality in the study area. Higher Institute of Agricultural Sciences University of Sousse School of Engineering São Paulo State University (UNESP), Ave. Brasil Sul, Number 56, ZIP Code 15385-000, SP Brazil University, Street Carolina Fonseca, Number 584, ZIP Code 08230-030, SP Department of Engineering School of Science and Technology Nottingham Trent University School of Engineering São Paulo State University (UNESP), Ave. Brasil Sul, Number 56, ZIP Code 15385-000, SP

ObjectiveGut microbial products are involved in regulation of host metabolism. In human and experimental studies, we explored the potential role of hippurate, a hepatic phase 2 conjugation product of microbial benzoate, as a marker and mediator of metabolic health.DesignIn 271 middle-aged non-diabetic Danish individuals, who were stratified on habitual dietary intake, we applied 1H-nuclear magnetic resonance (NMR) spectroscopy of urine samples and shotgun-sequencing-based metagenomics of the gut microbiome to explore links between the urine level of hippurate, measures of the gut microbiome, dietary fat and markers of metabolic health. In mechanistic experiments with chronic subcutaneous infusion of hippurate to high-fat-diet-fed obese mice, we tested for causality between hippurate and metabolic phenotypes.ResultsIn the human study, we showed that urine hippurate positively associates with microbial gene richness and functional modules for microbial benzoate biosynthetic pathways, one of which is less prevalent in the Bacteroides 2 enterotype compared with Ruminococcaceae or Prevotella enterotypes. Through dietary stratification, we identify a subset of study participants consuming a diet rich in saturated fat in which urine hippurate concentration, independently of gene richness, accounts for links with metabolic health. In the high-fat-fed mice experiments, we demonstrate causality through chronic infusion of hippurate (20 nmol/day) resulting in improved glucose tolerance and enhanced insulin secretion.ConclusionOur human and experimental studies show that a high urine hippurate concentration is a general marker of metabolic health, and in the context of obesity induced by high-fat diets, hippurate contributes to metabolic improvements, highlighting its potential as a mediator of metabolic health.

BACKGROUND: Electromyographic systems are widely used in scientific and clinical practice. The reproducibility and reliability of these measures are crucial when conducting scientific research and collecting experimental data. OBJECTIVE: To test the reliability of surface electromyography signals from both the Flexor Digitorum Superficialis (FDS) and Extensor Carpi Radialis Brevis (ECRB) muscles of both the left and right arms during an individual, static multi-planar maximum voluntary contraction handgrip task using the Myon 320 system (Myon AG, Switzerland). METHODS: Eight right-handed male participants performed two maximal handgrip tests in five separate wrist positions using both hands. Muscle activity was recorded from both forearms. Reliability was measured using the Standard Error of Measurement (SEM), Coefficient of Variation (CV) and Intra-class correlation coefficients. Wrist joint position correlations within and between the FDS and ECRB muscle activities were also analysed. RESULTS: Absolute reliability was shown across all positions for both hands with CV and SEM recorded at below 10%. The output measures indicate that the Myon 320 system (Myon AG, Switzerland) produces good to fair reliability when assessing forearm muscle activity. Correlations in the left FDS muscles were negative. Correlations between the left ECRB and left FDS muscles were variable but positive between the right ECRB and right FDS muscles. CONCLUSIONS: The data sets retrieved from all participants were reliably evaluated. Wrist position correlations within and between the FDS and ECRB muscles may have been influenced by hand dominance. The findings demonstrate that the methods and systems outlined in this study can be used reliably in future research.

There is an increased interest in the study of eye movements during the retrieval of autobiographical memories. Following this trend, the aim of the current study was to evaluate eye movements during the retrieval of remote and recent autobiographical memories. We instructed 71 participants to retrieve memories of personal events from early childhood (6–10 years), late childhood/early adolescence (11–14 years), late adolescence (15–18 years), and the last month. During the retrieval of these memories, participants wore eye-tracking glasses. Analyses showed that early childhood memories triggered fewer fixations and fixations with longer durations than memories from the last month. However, no significant differences were observed for the number of saccades, saccade durations, or total amplitude of the saccades. The fewer and longer lasting fixations during the retrieval of early childhood memories can be attributed either to the visual system reconstructing remote memories from an observer perspective or to difficulties when reconstructing remote memories.

International audience

Animal communication has long been thought to be subject to pressures and constraints associated with social relationships. However, our understanding of how the nature and quality of social relationships relates to the use and evolution of communication is limited by a lack of directly comparable methods across multiple levels of analysis. Here, we analysed observational data from 111 wild groups belonging to 26 non-human primate species, to test how vocal communication relates to dominance style (the strictness with which a dominance hierarchy is enforced, ranging from 'despotic' to 'tolerant'). At the individual-level, we found that dominant individuals who were more tolerant vocalized at a higher rate than their despotic counterparts. This indicates that tolerance within a relationship may place pressure on the dominant partner to communicate more during social interactions. At the species-level, however, despotic species exhibited a larger repertoire of hierarchy-related vocalizations than their tolerant counterparts. Findings suggest primate signals are used and evolve in tandem with the nature of interactions that characterize individuals' social relationships. Publisher PDF

The optoelectronic properties of semiconductor nanoparticles make them valuable candidates for the long-term monitoring of transmembrane electric fields in excitable cells. In this work, we show that the electric field sensitivity of the fluorescence intensity of type-I and quasi-type-II quantum dots and quantum rods is enhanced under two-photon excitation compared to single-photon excitation. Based on the superior electric field sensitivity of the two-photon excited fluorescence, we demonstrate the ability of quantum dots and rods to track fast switching E-fields. These findings indicate the potential of semiconductor nanoparticles as cellular voltage probes in multiphoton imaging.

Publisher Copyright: CCBY Mobile edge computing (MEC) has been proposed as a promising solution, which enables the content processing at the edges of the network helping to significantly improve the quality of experience (QoE) of end users. In this article, we aim to utilize the MEC facilities integrated with time-varying renewable energy resources for charging/discharging scheduling known as green scheduling of on-move electric vehicles (EVs) in a geographical wide area comprising of multiple charging stations (CSs). In the proposed system, the charging/discharging demands and the contextual information of EVs are first transmitted to nearby edge servers. With instantaneous electricity load/pricing and the availability of renewable energy at nearby CSs collected by aggregators, a weighted social-welfare maximization problem is then solved at the edges using greedy-based algorithms to choose the best CS for the EV's service. From the system point of view, our results reveal that compared to cloud-based scheme, the proposed MEC-assisted EVs scheduling system significantly improves the complexity burden, boosts the satisfaction (QoE) of EVs' drivers by localizing the traffic at nearby CSs, and further helps to efficiently utilize the renewable energy across CSs. Furthermore, our greedy-based algorithm, which utilizes the internal updating heuristics, outperforms some baseline solutions in terms of social welfare and power grid ancillary services.

In keyboard writing, typing skills are considered an important prerequisite of proficient text production. We describe the design, implementation, and application of a standardized copy-typing task in order to measure and assess individual typing fluency. A test-retest analysis indicates the instrument's reliability. While the task has been developed across eleven different languages and the related keyboard layouts, we here refer to a corpus of Dutch copy tasks (n = 1682). Analyses show that copying speed non-linearly varies with age. Bayesian analyses reveal differences in the typing performance and the underlying distributions of inter-key intervals between the different task components (e.g., lexical vs. non-lexical materials; high-frequent vs. low-frequent bigrams). Based on these findings it is strongly recommended to include copy-task measures in the analysis of keystroke logging data in writing studies. This supports a better comparability and interpretability of keystroke data from more complex or communicatively-embedded writing tasks across individuals. Further potential applications of the copy task for writing research are explained and discussed.

International audience; Only a small number of muscle activation patterns from lower limbs have been reported and simultaneous muscle activation from several lower limb muscles have not yet been investigated. The purpose of this study was to examine any gender differences in surface electromyography (EMG) activity from six recorded lower limb muscles of the dominant limb at baseline (i.e., with the foot placed flat on the floor and in the neutral position), and during concentric and eccentric phases when performing a heel raise task. In total, 10 females and 10 males performed a standing heel raise task comprising of three continuous phases: baseline, unloading (concentric muscle action), and loading (eccentric muscle action) phases. Muscle activation from six muscles (gastrocnemius medialis, gastrocnemius lateralis, soleus, tibialis anterior, peroneus longus, and peroneus brevis) were measured using the Myon 320 EMG System. Root mean squared values of each muscle were calculated for each phase. Descriptive and inferential statistics were incorporated into the study. Statistically significant p values were set at 0.05. The results showed no significant differences between baseline, concentric, and eccentric phases with respect to each of the muscles investigated. Except for the gastrocnemius medialis at baseline and concentric phases, no significant differences were observed between genders or contractions. The data suggests that gender does not significantly influence the eccentric phase during the standing heel raise task.

We investigate whether retrograde-amnesia can be indexed with pupil activity. We present the case of L, 19-year-old, without neurological or psychiatric disorders except for retrograde-amnesia. We invited L to retrieve retrograde and anterograde memories while his pupil size was monitering with eye-tracking glasses. Results demonstrated impaired retrograde retrieval but successful anterograde retrieval in L. He also attributed lower emotional value and visual imagery to his retrograde compared to his anterograde memories. Critically, smaller pupils were observed during retrograde than during anterograde retrieval. Our study provides the first evidence on the value of pupillometry as a potential physiological marker of amnesia.

Large-scale studies of individual differences in animal innovation are rare firstly because discovery behaviour itself is often rare, and secondly because of logistical difficulties associated with obtaining observational data on a large number of innovative individuals across multiple groups and locations. Here we take a different approach, using observer ratings to study innovative behaviour in 127 brown capuchin monkeys (Sapajus [Cebus] sp.) from 15 social groups and 7 facilities. Capuchins were reliably rated by 1 to 7 raters (mean 3.2 ± 1.6 raters/monkey) on a 7-point Likert scale for levels of innovative behaviour, task motivation, sociality, and dominance. In a subsample, we demonstrate these ratings are valid: rated innovation predicted performance on a learning task, rated motivation predicted participation in the task, rated dominance predicted social rank based on win/loss aggressive outcomes, and rated sociality predicted the time that monkeys spent in close proximity to others. Across all 127 capuchins, individuals that were rated as being more innovated were significantly younger, more social, and more motivated to engage in tasks. Sociality, task motivation, and age all had independent effects on innovativeness, whereas sex, dominance and group size were non-significant. Our findings are consistent with long-term behavioural observations of innovation in wild white-faced capuchins. Observer ratings may therefore be a valid tool for studies of animal innovation, and our findings highlight in particular several possible scenarios through which innovative behaviour might be selected for among capuchins.

Early life stages are vulnerable to environmental hazards and present important windows of opportunity for lifelong disease prevention. This makes early life a relevant starting point for exposome studies. The Advancing Tools for Human Early Lifecourse Exposome Research and Translation (ATHLETE) project aims to develop a toolbox of exposome tools and a Europe-wide exposome cohort that will be used to systematically quantify the effects of a wide range of community- and individual-level environmental risk factors on mental, cardiometabolic, and respiratory health outcomes and associated biological pathways, longitudinally from early pregnancy through to adolescence. Exposome tool and data development include as follows: (1) a findable, accessible, interoperable, reusable (FAIR) data infrastructure for early life exposome cohort data, including 16 prospective birth cohorts in 11 European countries; (2) targeted and nontargeted approaches to measure a wide range of environmental exposures (urban, chemical, physical, behavioral, social); (3) advanced statistical and toxicological strategies to analyze complex multidimensional exposome data; (4) estimation of associations between the exposome and early organ development, health trajectories, and biological (metagenomic, metabolomic, epigenetic, aging, and stress) pathways; (5) intervention strategies to improve early life urban and chemical exposomes, co-produced with local communities; and (6) child health impacts and associated costs related to the exposome. Data, tools, and results will be assembled in an openly accessible toolbox, which will provide great opportunities for researchers, policy-makers, and other stakeholders, beyond the duration of the project. ATHLETE'S results will help to better understand and prevent health damage from environmental exposures and their mixtures from the earliest parts of the life course onward. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement number 874583—the Advancing Tools for Human Early Lifecourse Exposome Research and Translation (ATHLETE) project. This publication reflects only the authors’ view and the European Commission is not responsible for any use that may be made of the information it contains. Dr. Dadvand is funded by a Ramón y Cajal fellowship (RYC2012-10995) awarded by the Spanish Ministry of Economy and Finance. Drs. Casas and Guxens are funded by the Instituto de Salud Carlos III (MS16/00128, CPII18/00018). Drs. Chatzi and Conti were supported by the National Institute of Environmental Health Sciences (R21ES029681, R01ES029944, R01ES030364, R01ES030691, and P30ES007048). Additional funding from National Institutes of Health supported Dr. Conti (P01CA196569, R01CA140561) and Dr. Stratakis (P30DK048522). Investigators Drs. McEachan and Wright receive funding from the National Institute for Health Research under its Applied Research Collaboration Yorkshire and Humber. Dr. Jaddoe received funding from a Consolidator Grant from the European Research Council (ERC-2014-CoG-648916). Dr. Duijts received funding from the European Union’s Horizon 2020 co-funded programme European Research Area Net on Biomarkers for Nutrition and Health (European Research Area Healthy Diet for a Healthy Life) (Early life programming of childhood health project [number 696295; 2017], ZonMW, The Netherlands [number 529051014; 2017]). Dr. Guxens received funding from the Agence Nationale de Securite Sanitaire de l’Alimentation de l’Environnement et du Travail (EST-18 RF-25). The views expressed are those of the author(s) and not necessarily those of the National Institute for Health Research or the Department of Health and Social Care.

International audience; There is limited research on the biomechanical assessment of the lower limb joints in relation to dynamic movements that occur at the hip, knee, and ankle joints when performing dorsiflexion (DF) and plantarflexion (PF) among males and females. This study investigated the differences in joint angles (including range of motion (ROM)) and forces (including moments) between the left and right limbs at the ankle, knee, and hip joints during dynamic DF and PF movements in both males and females. Using a general linear model employing multivariate analysis in relation to the joint angle, ROM, force, and moment datasets, the results revealed significant main effects for gender, sidedness, phases, and foot position with respect to joint angles. Weak correlations were observed between measured biomechanical variables. These results provide insightful information for clinicians and biomechanists that relate to lower limb exercise interventions and modelling efficacy standpoints.

Inhibition of mTOR is the standard of care for lymphangioleiomyomatosis (LAM). However, this therapy has variable tolerability and some patients show progressive decline of lung function despite treatment. LAM diagnosis and monitoring can also be challenging due to the heterogeneity of symptoms and insufficiency of non-invasive tests. Here, we propose monoamine-derived biomarkers that provide preclinical evidence for novel therapeutic approaches. The major histamine-derived metabolite methylimidazoleacetic acid (MIAA) is relatively more abundant in LAM plasma, and MIAA values are independent of VEGF-D. Higher levels of histamine are associated with poorer lung function and greater disease burden. Molecular and cellular analyses, and metabolic profiling confirmed active histamine signaling and metabolism. LAM tumorigenesis is reduced using approved drugs targeting monoamine oxidases A/B (clorgyline and rasagiline) or histamine H1 receptor (loratadine), and loratadine synergizes with rapamycin. Depletion of Maoa or Hrh1 expression, and administration of an L-histidine analog, or a low L-histidine diet, also reduce LAM tumorigenesis. These findings extend our knowledge of LAM biology and suggest possible ways of improving disease management., This research was supported by AELAM, The LAM Foundation (Seed Grant 2019), Instituto de Salud Carlos III grants PI15/00854, PI18/01029, and ICI19/00047 (co-funded by European Regional Development Fund (ERDF), a way to build Europe), Generalitat de Catalunya SGR grants 2014-364 and 2017-449, the CERCA Program, and ZonMW-TopZorg grant 842002003. C.L.M. acknowledges the financial support (PRA-2017-51 project) of the University of Pisa. A.U.K. is supported by Nottingham Trent University’s Independent Fellowship Scheme.

Key message In Physcomitrium patens, PpRH1/PpRH2 are GUCT-domain-containing DEAD-BOX RNA helicases localize to the nucleus. They are implicated in cell and tissue development in all stages of the moss life cycle. Abstract The DEAD-box-containing RNA helicase family encompasses a large and functionally important group of enzymes involved in cellular processes committed to the metabolism of RNA, including its transcription, processing, transport, translation and decay. Studies indicate this protein family has implied roles in plant vegetative and reproductive developmental processes as well as response to environmental stresses such has cold and high salinity. We focus here on a small conserved sub-group of GUCT domain-containing RNA helicase in the moss Physcomitrium patens. Phylogenetic analysis shows that RNA helicases containing the GUCT domain form a distinct conserved clade across the green lineage. In this clade, the P. patens genome possesses two closely related paralogues RNA helicases predicted to be nuclear, PpRH1 and PpRH2. Using in-locus gene fluorescent tagging we show that PpRH1 is localized to the nucleus in protonema. Analysis of PpRH1 and PpRH2 deletions, individually and together, indicates their potential roles in protonema, gametophore and sporophyte cellular and tissue development in P. patens. Additionally, the ultrastructural analysis of phyllid chloroplasts in Δrh2 and Δrh1/2 shows distinct starch granule accumulation under standard growth conditions associated with changes in photosynthetic activity parameters. We could not detect effects of either temperature or stress on protonema growth or PpRH1 and PpRH2 expression. Together, these results suggest that nuclear GUCT-containing RNA helicases play a role primarily in developmental processes directly or indirectly linked to photosynthesis activity in the moss P. patens. Supplementary Information The online version contains supplementary material available at 10.1007/s11103-021-01152-w.

Made available in DSpace on 2022-04-29T08:29:39Z (GMT). No. of bitstreams: 0 Previous issue date: 2021-10-01 Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) Deutsche Forschungsgemeinschaft Millions of scientific specimens are housed in museum collections, a large part of which are fluid preserved. The use of formaldehyde as fixative and subsequent storage in ethanol is especially common in ichthyology and herpetology. This type of preservation damages DNA and reduces the chance of successful retrieval of genetic data. We applied ancient DNA extraction and single stranded library construction protocols to a variety of vertebrate samples obtained from wet collections and of different ages. Our results show that almost all samples tested yielded endogenous DNA. Archival DNA extraction was successful across different tissue types as well as using small amounts of tissue. Conversion of archival DNA fragments into single-stranded libraries resulted in usable data even for samples with initially undetectable DNA amounts. Subsequent target capture approaches for mitochondrial DNA using homemade baits on a subset of 30 samples resulted in almost complete mitochondrial genome sequences in several instances. Thus, application of ancient DNA methodology makes wet collection specimens, including type material as well as rare, old or extinct species, accessible for genetic and genomic analyses. Our results, accompanied by detailed step-by-step protocols, are a large step forward to open the DNA archive of museum wet collections for scientific studies. University Museum of Bergen SNSB Bavarian State Collection of Zoology Departamento de Biodiversidade Instituto de Biociências and Centro de Aquicultura (CAUNESP) Laboratório de Herpetologia Universidade Estadual Paulista - UNESP Zoological Institute Braunschweig University of Technology Department of Mathematics and Natural Sciences Evolutionary Adaptive Genomics Institute for Biochemistry and Biology University of Potsdam Museum für Naturkunde– Leibniz Institute for Evolution and Biodiversity Science Chair of Wildlife Ecology and Management Albert Ludwigs University Freiburg Section for Evolutionary Genomics The GLOBE Institute University of Copenhagen Department of Zoology Cambridge University Department of Microbiology Immunology and Transplantation Division of Clinical and Epidemiological Virology Rega Institute for Medical Research School of Science and Technology Nottingham Trent University Departamento de Biodiversidade Instituto de Biociências and Centro de Aquicultura (CAUNESP) Laboratório de Herpetologia Universidade Estadual Paulista - UNESP FAPESP: #2013/50741-7 FAPESP: #2017/2616-8 FAPESP: #2018/15425-0 CNPq: 306623/2018-8 Deutsche Forschungsgemeinschaft: 351649567 CNPq: 431589/2016-0

The intestinal microbiota plays a key role in shaping host homeostasis by regulating metabolism, immune responses and behaviour. Its dysregulation has been associated with metabolic, immune and neuropsychiatric disorders and is accompanied by changes in bacterial metabolic regulation. Although proteomics is well suited for analysis of individual microbes, metaproteomics of faecal samples is challenging due to the physical structure of the sample, presence of contaminating host proteins and coexistence of hundreds of species. Furthermore, there is a lack of consensus regarding preparation of faecal samples, as well as downstream bioinformatic analyses following metaproteomic data acquisition. Here we assess sample preparation and data analysis strategies applied to mouse faeces in a typical LC-MS/MS metaproteomic experiment. We show that low speed centrifugation (LSC) of faecal samples leads to high protein identification rates and a balanced taxonomic representation. During database search, protein sequence databases derived from matched mouse faecal metagenomes provided up to four times more MS/MS identifications compared to other database construction strategies, while a two-step database search strategy led to accumulation of false positive protein identifications. Comparison of matching metaproteome and metagenome data revealed a positive correlation between protein and gene abundances, as well as significant overlap and correlation in taxonomic representation. Notably, nearly all functional categories of detected protein groups were differentially abundant in the metaproteome compared to what would be expected from the metagenome, highlighting the need to perform metaproteomics when studying complex microbiome samples.

Made available in DSpace on 2021-06-25T10:19:29Z (GMT). No. of bitstreams: 0 Previous issue date: 2020-12-21 During their domestication via artificial selection, humans have substantially modified the morphology and thus visual appearance of non-human animals. While research highlights the negative impact of these modifications on physical functioning, little is known about their impact on behavior and signaling, either toward humans or conspecifics. Changes in the appearance of the face, such as those associated with, but not limited to, facial expressions, form an important part of non-verbal communication. In companion animals, the face is one of their most visually diverse features (due to human-driven selection), which may impact the visual clarity of expressions and other forms of signaling. Using the domestic cat as our model, we applied a new analytical technique in order to understand the impact of breed variation on relative positioning of facial landmarks, chosen specifically for their association with the production of various facial movements, and the expression of affect. We then assessed the extent to which facial appearances known to be associated with a specific underlying state (i.e., pain, assessed via a validated, facial pain score), could be reliably detected in a morphologically diverse population. Substantial baseline variation in landmarks was identified at both the cephalic (e.g., brachycephalic, dolichocephalic, mesocephalic) as well as breed levels. While differences in facial pain scores could successfully differentiate between “pain” and “no pain” in the facial appearance of domestic shorthaired cats (DSH), these differences were no longer detectable when assessed within a larger more morphologically diverse population, after corrections for multiple testing were applied. There was also considerable overlap between pain scores in the DSH “pain” population and the neutral faces of other breeds. Additionally, for several paedomorphic breeds, their neutral face shapes produced scores indicative of greater pain, compared to most other breeds, including the DSH cats actually in pain. Our findings highlight the degree to which anthropocentric selection might disrupt the communicative content of animals' faces, in this case the domestic cat. These results also suggest a potential human preference for features extending beyond the infantile, to include negatively-valenced facial forms such as pain. Animal Rural and Environmental Sciences Nottingham Trent University School of Life Sciences University of Lincoln School of Veterinary Medicine and Animal Science São Paulo State University (Unesp) School of Veterinary Medicine and Animal Science São Paulo State University (Unesp)

International audience; It is well known in computational acoustics that high frequency wave problems are difficult to analyse using conventional finite or boundary element approaches, since they require extremely fine spatial discretisations to model the highly oscillating wave behaviour, necessitating a large number of elements and long computational run times. On the other hand, a number of statistical or ray based methods have been developed specifically for modelling wave problems at high frequencies; these include Statistical Energy Analysis (SEA) and Dynamical Energy Analysis (DEA). Modelling time-dependent wave problems with broadband frequency content is therefore a challenging task, since both low and high frequency oscillations co-exist within the same time-dependent signal. We propose a hybrid method for this class of problems, whereby the Convolution Quadrature Boundary Element Method (CQBEM) is employed to model the lower frequency content. The CQBEM provides an explicit connection to the frequency content of the wave via the Z-transform, making it an ideal candidate for such a hybrid scheme. The high frequency content is approximated as a superposition of plane waves whose directions and amplitudes are inherited from the corresponding phase-space densities computed in DEA.

In this work, we disclose a non-invasive method for the monitoring and predicting of the swarming process within honeybee colonies, using vibro-acoustic information. Two machine learning algorithms are presented for the prediction of swarming, based on vibration data recorded using accelerometers placed in the heart of honeybee hives. Both algorithms successfully discriminate between colonies intending and not intending to swarm with a high degree of accuracy, over 90% for each method, with successful swarming prediction up to 30 days prior to the event. We show that instantaneous vibrational spectra predict the swarming within the swarming season only, and that this limitation can be lifted provided that the history of the evolution of the spectra is accounted for. We also disclose queen toots and quacks, showing statistics of the occurrence of queen pipes over the entire swarming season. From this we were able to determine that (1) tooting always precedes quacking, (2) under natural conditions there is a 4 to 7 day period without queen tooting following the exit of the primary swarm, and (3) human intervention, such as queen clipping and the opening of a hive, causes strong interferences with important mechanisms for the prevention of simultaneous rival queen emergence.

Made available in DSpace on 2021-06-25T10:46:00Z (GMT). No. of bitstreams: 0 Previous issue date: 2020-12-01 The two species of the Bokermannohyla claresignata species group (Anura: Hylidae) have not been collected for the last four decades. It is the only species group of the hyline tribe Cophomantini that has not yet been analysed genetically. Its phylogenetic position is thus uncertain, and it has a combination of adult and larval character states that make this group a crucial missing piece that hinders our understanding of Cophomantini phylogenetics and character evolution. We obtained DNA sequences from a museum larval specimen of Bok. claresignata, using specialized extraction methods and high-throughput DNA sequencing, and combined the molecular phylogenetic results with available phenotypic information to provide new insights into the taxonomy and phylogenetic relationships of its species group. Our phylogenetic results place Bok. claresignata as sister to the Boana pulchella group, supporting its inclusion in Boana, together with Bokermannohyla clepsydra. In light of this new finding, we recognize a newly defined Boana claresignata group to accommodate these species, thus resolving both the polyphyly of Bokermannohyla and the paraphyly of Boana. Considering the phylogenetic relationships of the Boana claresignata group, we also discuss the evolution of suctorial tadpoles and mature oocyte/egg pigmentation in Cophomantini. Departamento de Biodiversidade e Centro de Aquicultura I.B. Universidade Estadual Paulista (UNESP) Rio Claro Departamento de Ciências Biológicas Universidade Do Estado de Minas Gerais, Campus Ubá, Avenida Olegário Maciel Laboratório de Anfíbios Departamento de Zoologia Instituto de Biociências Universidade de Saõ Paulo Rua Do Mataõ Travessa Sala Cidade Universitária Saõ Paulo Laboratório de Herpetologia Departamento de Zoologia Instituto de Ciências Biológicas Universidade Federal de Minas Gerais, Av. Presidente Antônio Carlos, Pampulha, Belo Horizonte Setor de Herpetologia Departamento de Vertebrados Museu Nacional Universidade Federal Do Rio de Janeiro Quinta da Boa Vista Rio de Janeiro Evolutionary Adaptive Genomics Institute for Biochemistry and Biology Department of Mathematics and Natural Sciences University of Potsdam Karl-Liebknecht-Straße School of Science and Technology Nottingham Trent University División Herpetologiá Museo Argentino de Ciencias Naturales 'Bernardino Rivadavia'-CONICET Ángel Gallardo Departamento de Biodiversidad y Biologia Experimental Facultad de Ciencias Exactas y Naturales Universidad de Buenos Aires Departamento de Biodiversidade e Centro de Aquicultura I.B. Universidade Estadual Paulista (UNESP) Rio Claro

The study was supported by the COST Action CA15113 Science and Management of Intermittent Rivers and Ephemeral Streams (http://www.smires.eu), funded by COST (European Cooperation in Science and Technology). NC was supported by the French research program Make Our Planet Great Again. MC-A was supported by the MECODISPER project (CTM2017-89295-P) funded by the Spanish Ministerio de Economia, Industria y Competitividad (MINECO) - Agencia Estatal de Investigacion (AEI) and cofunded by the European Regional Development Fund (ERDF). AC-R acknowledges funding by MINECO-AEI-ERDF (CGL2014-53140-P). CG-C was supported by the EDRF (COMPETE2020 and PT2020) and the Portuguese Foundation for Science and Technology, through the CBMA strategic program UID/BIA/04050/2019 (POCI-01-0145-FEDER-007569) and the STREAMECO project (Biodiversity and ecosystem functioning under climate change: from the gene to the stream, PTDC/CTA-AMB/31245/2017). JH was supported by the project 'Global taxonomic, functional and phylogenetic diversity of stream macroinvertebrate communities: unravelling spatial trends, ecological determinants and anthropogenic threats' funded by the Academy of Finland. PP and MP were supported by the Czech Science Foundation (P505-20-17305S). ZC was supported by the projects EFOP-3.6.1.-16-2016-00004, 20765-3/2018/FEKUTSTRAT and TUDFO/47138/2019-ITM. We thank two anonymous reviewers for insightful feedback that improved an earlier draft of this manuscript., Dispersal is an essential process in population and community dynamics, but is difficult to measure in the field. In freshwater ecosystems, information on biological traits related to organisms’ morphology, life history and behaviour provides useful dispersal proxies, but information remains scattered or unpublished for many taxa. We compiled information on multiple dispersal-related biological traits of European aquatic macroinvertebrates in a unique resource, the DISPERSE database. DISPERSE includes nine dispersal-related traits subdivided into 39 trait categories for 480 taxa, including Annelida, Mollusca, Platyhelminthes, and Arthropoda such as Crustacea and Insecta, generally at the genus level. Information within DISPERSE can be used to address fundamental research questions in metapopulation ecology, metacommunity ecology, macroecology and evolutionary ecology. Information on dispersal proxies can be applied to improve predictions of ecological responses to global change, and to inform improvements to biomonitoring, conservation and management strategies. The diverse sources used in DISPERSE complement existing trait databases by providing new information on dispersal traits, most of which would not otherwise be accessible to the scientific community., COST Action Science and Management of Intermittent Rivers and Ephemeral Streams - COST (European Cooperation in Science and Technology) CA15113, French research program Make Our Planet Great Again, MECODISPER project - Spanish Ministerio de Economia, Industria y Competitividad (MINECO) - Agencia Estatal de Investigacion (AEI) CTM2017-89295-P, European Union (EU), MINECO-AEI-ERDF CGL2014-53140-P, EDRF (COMPETE2020), Portuguese Foundation for Science and Technology, through the CBMA strategic program UID/BIA/04050/2019 (POCI-01-0145-FEDER-007569), STREAMECO project (Biodiversity and ecosystem functioning under climate change: from the gene to the stream) PTDC/CTA-AMB/31245/2017, project 'Global taxonomic, functional and phylogenetic diversity of stream macroinvertebrate communities: unravelling spatial trends, ecological determinants and anthropogenic threats' - Academy of Finland, Grant Agency of the Czech Republic P505-20-17305S, EDRF (PT2020), EFOP-3.6.1.-16-2016-00004, 20765-3/2018/FEKUTSTRAT, TUDFO/47138/2019-ITM

SMIRES is a COST Action addressing the Science and Management of Intermittent Rivers & Ephemeral Streams (coord. T. Datry, INRAE, and G. Singer, University of Innsbruck; http://www.smires.eu). This COST Action had brought together scientists from various research field and stakeholders to develop a European multidisciplinary network for synthesising the fragmented and recent knowledge on temporary water courses, improving our understanding of Intermittent Rivers and Ephemeral Streams (IRES) and translating this into a science-based, sustainable management of river networks. The working group “Prevalence, distribution and trends of IRES” (WG1) has the central role to provide the physical basis of the SMIRES Action. One of the tasks of WG1 was to compile flow gauging data at the European scale. As part of this work, examples of intermittent rivers and ephemeral streams were collected across Europe, including gauged catchments with both natural and highly influenced river flow regimes. A total of 40 examples have been put together in this catalogue to provide an overview of the variety of IRES in Europe. The selected IRES are not meant to be representative of all intermittent water courses in Europe but rather highlight the variety in these water courses. Introductory pages describe the procedures used to create the catalogue including definitions of the statistical measures reported for the individual intermittent rivers and ephemeral streams, and provide an overview of the catalogued water courses. Information on the selected gauged intermittent rivers and ephemeral streams is summarised in a two-page document: The first standardized page describes the main characteristics of the catchments (land-use, geology, climate, etc.) and the river flow regime. Two panels display the hydrographs and flow durations curves, and a table gives metrics specific to river flow intermittence relevant for ecology. The second page is dedicated to the description and reasons for intermittence. A short description about the spatio-temporal pattern of zero-flow events. This section may describe the seasonal behaviour of the stream, observed long-term trends, locations with frequently observed zero-flow events along the river network, etc. The monitoring network, including gauging stations and other types of observations (e.g. visual inspection of the flow states at different locations along the river) in the catchment, are also described.

Treball desenvolupat en el marc del programa "European Project Semester". The project was to develop an intelligent recycling bin for consumers to recycle electronic and electrical products (e-waste) which reach their end of life (Eol) stage or to repurpose them. When a consumer recycles a product via the intelligent bin, he/she gets rewarded by some incentives. These incentives are calculated via the assessment of the environmental impact and residue state of the product. The incentives could be cash or equivalent such as vouchers or trade off new goods that the consumer purchases in the store. Outgoing

1. River ecosystems worldwide are affected by altered flow regimes, and an advanced science and practice of environmental flows has developed to understand and reduce these impacts. But most environmental flows approaches ignore flow intermittency, which is a natural feature of 30% of the global river network length. Ignoring flow intermittency when setting environmental flows in naturally intermittent rivers might lead to deleterious ecological effects. \ud \ud 2. We review evidence of the ecological effects of flow intermittency and provide guidance to incorporate intermittency (non-flow events) into existing methods judged as suitable for application in temporary waterways. \ud \ud 3. To better integrate non-flow events into hydrological methods, we propose a suite of new indicators to be used in the Range of Variability Approach. These indicators reflect dry periods and the unpredictable nature of temporary waterways. We develop a predictability index for protecting those species adapted to temporary conditions. \ud \ud 4. For hydraulic habitat models, we find that mesohabitat methods are particularly effective for describing complex habitat dynamics during dry phases. We present an example of the European eel to show the relationship between discharge and non-flow days and wet area, habitat suitability, and connectivity. \ud \ud 5. We find that existing holistic approaches may be applied to temporary waterways without significant structural alteration to their stepwise frameworks, but new component methods are needed to address flow-related aspects across both flow and non-flow periods of the flow regime. \ud \ud 6. Synthesis and applications. Setting environmental flow requirements for temporary waterways requires modification and enhancement of existing approaches and methodologies, most notably the explicit consideration of non‐flow events and greater integration of specific geomorphic, hydrogeologic, and hydraulic elements. Temporary waterways are among the freshwater ecosystems most vulnerable to alterations in flow regimes, and they are also under great pressure. The methodological modifications recommended in this paper will aid water managers in protecting key components of temporary flow regimes, thereby preserving their unique ecology and associated services.

Drying disturbances are the primary determinant of aquatic community biodiversity in dynamic river ecosystems. Research exploring how communities respond to disturbance has focused on benthic invertebrates in surface sediments, inadequately representing a connected community that extends into the subsurface. We compared subsurface and benthic invertebrate responses to drying, to identify common and context‐dependent spatial patterns. We characterized community composition, alpha diversity and beta diversity across a gradient of drying duration. Subsurface communities responded to drying, but these responses were typically less pronounced than those of benthic communities. Despite compositional changes and in contrast to reductions in benthic alpha diversity, the alpha diversity of subsurface communities remained stable except at long drying durations. Some primarily benthic taxa were among those whose subsurface frequency and abundance responded positively to drying. Collectively, changing composition, stable richness and taxon‐specific increases in occurrence provide evidence that subsurface sediments can support persistence of invertebrate communities during drying disturbances. Beta‐diversity patterns varied and no consistent patterns distinguished the total diversity, turnover or nestedness of subsurface compared to benthic communities. In response to increasing drying duration, beta diversity increased or remained stable for benthic communities, but remained stable or decreased for subsurface communities, likely reflecting contrasts in the influence of mass effects, priority effects and environmental filtering. Dissimilarity between subsurface and benthic communities remained stable or increased with drying duration, suggesting that subsurface communities maintain distinct biodiversity value while also supporting temporary influxes of benthic taxa during drying events. As temporary rivers increase in extent due to global change, we highlight that recognizing the connected communities that extend into the subsurface sediments can enable holistic understanding of ecological responses to drying, the key determinant of biodiversity in these dynamic ecosystems.