114 results on '"Nobuhiro Ishida"'
Search Results
2. Virus Inactivation Based on Optimal Surfactant Reservoir of Mesoporous Silica
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Rie Hirao, Keisuke Shigetoh, Shinji Inagaki, and Nobuhiro Ishida
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Biomaterials ,Biochemistry (medical) ,Biomedical Engineering ,General Chemistry - Published
- 2023
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3. Automation and labor shortage in container terminals
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Nobuhiro, Ishida
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労働者不足と高齢化 ,自動化 ,コンテナ荷役 ,683.94 ,外国人労働者 - Abstract
コンテナターミナルの自動化を進める港湾が増えている。その最大の目的は、コンテナ荷役の効率性を高めるためであることはいうまでもないが、港湾労働者の不足に対応することも目的の一つである。港湾労働者の不足や高齢化が慢性化しているといわれて久しいが、労働者不足や高齢化は港湾労働だけの問題ではなく、多くの産業においても見受けられ、業種によっては、労働力不足を外国人労働者で補おうとする動きが目立っている。コンテナ荷役労働について、コンテナヤードの自動化と外国人労働者という二つの視点から考察し、その課題を明らかにする。, 資料(Material)
- Published
- 2021
4. Self-assembled Cuprous Coordination Polymer as a Catalyst for CO2 Electrochemical Reduction into C2 Products
- Author
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Takamasa Nonaka, Takeshi Morikawa, Yusaku F. Nishimura, Kosuke Kitazumi, Naonari Sakamoto, Takeo Arai, Keita Sekizawa, Masataka Ohashi, Yuichi Kato, and Nobuhiro Ishida
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Ethylene ,Materials science ,Ethanol ,010405 organic chemistry ,Coordination polymer ,General Chemistry ,010402 general chemistry ,Electrochemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Nanomaterials ,Metal ,Reduction (complexity) ,chemistry.chemical_compound ,chemistry ,Chemical engineering ,visual_art ,visual_art.visual_art_medium - Abstract
C2 production with conventional metal complex catalysts has been a significant challenge. Here, we present the electrochemical reduction of CO2 into C2 products such as ethylene and ethanol with hi...
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- 2020
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5. The recent trend of the domestic freight transport in Japan
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Nobuhiro, Ishida
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681.6 - Abstract
資料(Material)
- Published
- 2020
6. Reduction of the Cytotoxicity of Copper (II) Oxide Nanoparticles by Coating with a Surface-Binding Peptide
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Takao Imaeda, Takaaki Hatanaka, Nobuhiro Ishida, and Yoichi Hosokawa
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0106 biological sciences ,Surface Properties ,Metal Nanoparticles ,Bioengineering ,Peptide ,Microbial Sensitivity Tests ,Biopanning ,Platinum nanoparticles ,01 natural sciences ,Applied Microbiology and Biotechnology ,Biochemistry ,Copper(II) oxide ,chemistry.chemical_compound ,Anti-Infective Agents ,010608 biotechnology ,Humans ,Cytotoxicity ,Molecular Biology ,chemistry.chemical_classification ,010405 organic chemistry ,Chemistry ,technology, industry, and agriculture ,General Medicine ,Antimicrobial ,Combinatorial chemistry ,Cyclic peptide ,0104 chemical sciences ,Surface coating ,HEK293 Cells ,Copper ,Biotechnology - Abstract
Copper (II) oxide nanoparticles (CuO-NPs) have been studied as potential antimicrobial agents, similar to silver or platinum nanoparticles. However, the use of excess NPs is limited by their safety and toxicity in beneficial microflora and human cells. In this study, we evaluated the cytotoxicity of CuO-NPs by coating with a novel cyclic peptide, CuO binding peptide 1 (CuBP1), cyclic-SCATPFSPQVCS, which binds to the surface of CuO-NPs. CuBP1 was identified using biopanning of a T7 phage display system and was found to promote the aggregation of CuO-NPs under mild conditions. The treated CuO-NPs with CuBP1 caused the reduction of the cytotoxicity against Escherichia coli, Lactobacillus helveticus, and five other microorganisms, including bacteria and eukaryotes. Similar effects were also demonstrated against human embryonic kidney (HEK293) cells in vitro. Our findings suggested that the CuO-NPs coated with a surface-binding peptide may have applications as a safe antimicrobial agent without excessive cytotoxic activity against beneficial microflora and human cells. Moreover, a similar tendency may be achieved with other metal particles, such as silver or platinum NPs, by using optimal metal binding peptides.
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- 2019
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7. A profile of Prof. Mami Aoki's academic achievements and personality
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Nobuhiro, Ishida
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289.1 - Abstract
青木真美教授定年退職記念号(Special issue in commemoration of Prof. Mami Aoki's retirement)
- Published
- 2021
8. The origins of binding specificity of a lanthanide ion binding peptide
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Yoichi Hosokawa, Nobuhiro Ishida, Akimasa Matsugami, Fumiaki Hayashi, Nobuaki Kikkawa, and Takaaki Hatanaka
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0301 basic medicine ,Lanthanide ,Magnetic Resonance Spectroscopy ,Biophysics ,lcsh:Medicine ,Calorimetry ,Molecular Dynamics Simulation ,Crystallography, X-Ray ,010402 general chemistry ,Lanthanoid Series Elements ,01 natural sciences ,Article ,Dissociation (chemistry) ,Ion ,03 medical and health sciences ,Ion binding ,Cations ,Molecule ,lcsh:Science ,Binding selectivity ,Binding Sites ,Multidisciplinary ,Aqueous solution ,Ionic radius ,Molecular Structure ,Chemistry ,lcsh:R ,Water ,Computational biology and bioinformatics ,Coordination chemistry ,0104 chemical sciences ,Crystallography ,030104 developmental biology ,Thermodynamics ,lcsh:Q ,Structural biology ,Peptides ,Inorganic chemistry - Abstract
Lanthanide ions (Ln3+) show similar physicochemical properties in aqueous solutions, wherein they exist as + 3 cations and exhibit ionic radii differences of less than 0.26 Å. A flexible linear peptide lanthanide binding tag (LBT), which recognizes a series of 15 Ln3+, shows an interesting characteristic in binding specificity, i.e., binding affinity biphasically changes with an increase in the atomic number, and shows a greater than 60-fold affinity difference between the highest and lowest values. Herein, by combining experimental and computational investigations, we gain deep insight into the reaction mechanism underlying the specificity of LBT3, an LBT mutant, toward Ln3+. Our results clearly show that LBT3-Ln3+ binding can be divided into three, and the large affinity difference is based on the ability of Ln3+ in a complex to be directly coordinated with a water molecule. When the LBT3 recognizes a Ln3+ with a larger ionic radius (La3+ to Sm3+), a water molecule can interact with Ln3+ directly. This extra water molecule infiltrates the complex and induces dissociation of the Asn5 sidechain (one of the coordinates) from Ln3+, resulting in a destabilizing complex and low affinity. Conversely, with recognition of smaller Ln3+ (Sm3+ to Yb3+), the LBT3 completely surrounds the ions and constructs a stable high affinity complex. Moreover, when the LBT3 recognizes the smallest Ln3+, namely Lu3+, although it completely surrounds Lu3+, an entropically unfavorable phenomenon specifically occurs, resulting in lower affinity than that of Yb3+. Our findings will be useful for the design of molecules that enable the distinction of sub-angstrom size differences.
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- 2020
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9. CO2 conversion by high-dose rate electron beam irradiation: one-step, metal-free and simultaneous production of H2, CO, CH4, C2H6 and organic acids from an acid-decomposed CaCO3/additive EtOH mixture
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Masakazu Washio, Shuji Kajiya, Nobuhiro Ishida, Arimitsu Usuki, Ayako Ohshima, and Yoichi Hosokawa
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chemistry.chemical_classification ,010405 organic chemistry ,Formic acid ,Radical ,Energy conversion efficiency ,010402 general chemistry ,01 natural sciences ,Pollution ,0104 chemical sciences ,Acetic acid ,chemistry.chemical_compound ,chemistry ,Yield (chemistry) ,Radiolysis ,Environmental Chemistry ,Organic matter ,Irradiation ,Nuclear chemistry - Abstract
The reduction in CO2 emissions is an important issue across many industries. Inspired by extraterrestrial organic matter formation, we herein report a CO2 conversion approach based on high-dose rate electron beam (EB) irradiation of an acid-decomposed CaCO3/additive EtOH mixture. With 13C-CaCO3, 12C-EtOH and 100 kGy s−1 EB, H2, CO, CH4, C2H6 and organic acids are simultaneously produced within a few seconds, except for 2,3-butanediol formation from excess EtOH. According to the organic analysis results, CO and organic acids contain 13C carbon derived from 13C-CaCO3. The high-dose rate EB gives increased CO2 conversion products compared to the low-dose rate EB. The CO2 conversion yield/energy efficiency (product energy/input electrical energy) at 300 kGy is 1.51/0.50% in total (CO: 0.03/0.01%, formic acid: 1.31/0.29%, acetic acid: 0.05/0.04% and propionic acid: 0.12/0.16%), and the total radiation energy efficiency (REE, product energy/net radiation energy) of CO2 at 300 kGy is 51.5% (CO: 0.90%, formic acid: 30.3%, acetic acid: 3.71% and propionic acid: 16.6%). The CO2 conversion yield is ∼15 times larger than that of the only known CO2 gas radiolysis (0.1%, CO only). Furthermore, the REE at 100 kGy is also ∼15 times higher than that obtained in the absence of EtOH. The energy input for the 100% conversion yield is estimated to be 38 000 GJ per t-CO2. The combination of the high-dose rate EB with organic additives facilitated CO2 capture by radicals to afford improved CO2 conversion efficiency/yield.
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- 2019
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10. Expression of the human UDP-galactose transporter gene hUGT1 in tobacco plants' enhanced plant hardness
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Kanae Koike, Nobukazu Tanaka, Mohamed Farouk Mohamed Khalil, Yuma Tazoe, Kenji Kitamura, Nobuhiro Ishida, Yoshio Hagura, and Tayebeh Abedi
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0301 basic medicine ,Monosaccharide Transport Proteins ,Golgi Apparatus ,Bioengineering ,Polysaccharide ,Galactans ,Lignin ,Applied Microbiology and Biotechnology ,Palisade cell ,Cell wall ,03 medical and health sciences ,chemistry.chemical_compound ,symbols.namesake ,Cytosol ,Cell Wall ,Hardness ,Polysaccharides ,Arabinogalactan ,Tobacco ,Humans ,chemistry.chemical_classification ,Plant Stems ,fungi ,Galactose ,food and beverages ,Xylem ,Golgi apparatus ,Plants, Genetically Modified ,Plant Leaves ,030104 developmental biology ,chemistry ,Biochemistry ,symbols ,Heterologous expression ,Biotechnology - Abstract
We reported previously that tobacco plants transformed with the human UDP-galactose transporter 1 gene (hUGT1) had enhanced growth, displayed characteristic traits, and had an increased proportion of galactose (hyper-galactosylation) in the cell wall matrix polysaccharides. Here, we report that hUGT1-transgenic plants have an enhanced hardness. As determined by breaking and bending tests, the leaves and stems of hUGT1-transgenic plants were harder than those of control plants. Transmission electron microscopy revealed that the cell walls of palisade cells in leaves, and those of cortex cells and xylem fibers in stems of hUGT1-transgenic plants, were thicker than those of control plants. The increased amounts of total cell wall materials extracted from the leaves and stems of hUGT1-transgenic plants supported the increased cell wall thickness. In addition, the cell walls of the hUGT1-transgenic plants showed an increased lignin contents, which was supported by the up-regulation of lignin biosynthetic genes. Thus, the heterologous expression of hUGT1 enhanced the accumulation of cell wall materials, which was accompanied by the increased lignin content, resulting in the increased hardness of the leaves and stems of hUGT1-trangenic plants. The enhanced accumulation of cell wall materials might be related to the hyper-galactosylation of cell wall matrix polysaccharides, most notably arabinogalactan, because of the enhanced UDP-galactose transport from the cytosol to the Golgi apparatus by hUGT1, as suggested in our previous report.
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- 2018
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11. Improved Recovery and Selectivity of Lanthanide-Ion-Binding Cyclic Peptide Hosts by Changing the Position of Acidic Amino Acids
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Yoichi Hosokawa, Ayako Oshima, Takaaki Hatanaka, and Nobuhiro Ishida
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lanthanide ions ,cyclic peptide ,complexation ,precipitation ,dipole moment ,frontier orbital ,cohesion energy ,Geology ,Geotechnical Engineering and Engineering Geology - Abstract
The development of an effective host molecule to separate lanthanide (Ln) ions and a method for predicting its guest recognition/self-assembly behavior based on primary chemical structures are highly sought after in both academia and industry. Herein, we report the improvement of one-pot Ln ion recovery and a performance prediction method for four new cyclic peptide hosts that differ in the position of acidic amino acids. These cyclic peptide hosts could recognize Ln3+ directly through a 1:1 complexation–precipitation process and exhibited high Lu3+ selectivity in spite of similar ion size and electronegativity when the positions of the acidic amino acids were changed. This unpredictable selectivity was explained by considering the dipole moment, lowest unoccupied molecular orbital, and cohesion energy. In addition, a semi-empirical function using these parameters was proposed for screening the sequence and estimating the isolated yields without long-time molecular dynamics calculations. The insights obtained from this study can be employed for the development of high-performance peptides for the selective recovery of Ln and other metal ions, as well as for the construction of diverse supramolecular recognition systems.
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- 2022
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12. Ordered silica mineralization by regulating local reaction conditions
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Nobuhiro Ishida, Takaaki Hatanaka, and Masataka Ohashi
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Biomedical Engineering ,Cationic polymerization ,Nucleation ,Dominant factor ,02 engineering and technology ,Mineralization (soil science) ,Silicon Dioxide ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Nanostructures ,0104 chemical sciences ,Nanomaterials ,chemistry.chemical_compound ,Tetramethyl orthosilicate ,chemistry ,Chemical engineering ,General Materials Science ,Peptides ,0210 nano-technology - Abstract
Using cationic peptides with tetramethyl orthosilicate, a silica nano-film >100 μm in size with
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- 2018
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13. Direct Recovery of the Rare Earth Elements Using a Silk Displaying a Metal-Recognizing Peptide
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Hideki Sezutsu, Yoichi Hosokawa, Tetsuya Iizuka, Katsura Kojima, Tsunenori Kameda, Takaaki Hatanaka, Hidetoshi Teramoto, and Nobuhiro Ishida
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Recombinant Fusion Proteins ,Metal ions in aqueous solution ,Rare earth ,Silk ,Pharmaceutical Science ,Fibroin ,Peptide ,rare earth elements ,rare earth recovery ,02 engineering and technology ,Mixed solution ,010402 general chemistry ,01 natural sciences ,Sericin ,Article ,Analytical Chemistry ,Animals, Genetically Modified ,lcsh:QD241-441 ,lcsh:Organic chemistry ,Drug Discovery ,Animals ,dysprosium ,Physical and Theoretical Chemistry ,chemistry.chemical_classification ,fungi ,Organic Chemistry ,Spectrometry, X-Ray Emission ,Bombyx ,021001 nanoscience & nanotechnology ,Combinatorial chemistry ,Fusion protein ,0104 chemical sciences ,SILK ,chemistry ,Chemistry (miscellaneous) ,Molecular Medicine ,Metals, Rare Earth ,transgenic silkworm ,Powders ,Fibroins ,Peptides ,0210 nano-technology - Abstract
Rare earth elements (RE) are indispensable metallic resources in the production of advanced materials, hence, a cost- and energy-effective recovery process is required to meet the rapidly increasing RE demand. Here, we propose an artificial RE recovery approach that uses a functional silk displaying a RE-recognizing peptide. Using the piggyBac system, we constructed a transgenic silkworm in which one or two copies of the gene coding for the RE-recognizing peptide (Lamp1) was fused with that of the fibroin L (FibL) protein. The purified FibL-Lamp1 fusion protein from the transgenic silkworm was able to recognize dysprosium (Dy3+), a RE, under physiological conditions. This method can also be used with silk from which sericin has been removed. Furthermore, the Dy-recovery ability of this silk was significantly improved by crushing the silk. Our simple approach is expected to facilitate the direct recovery of RE from an actual mixed solution of metal ions, such as seawater and industrial wastewater, under mild conditions without additional energy input.
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- 2020
14. Electrochemical C2 Production from CO2 via Self-Assembled Nanoparticles of Cuprous Coordination Polymer
- Author
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Nobuhiro Ishida, Naonari Sakamoto, Kosuke Kitazumi, Takeo Arai, Yusaku F. Nishimura, Masataka Ohashi, Yuichi Kato, and Takamasa Nonaka
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chemistry.chemical_compound ,chemistry ,Chemical engineering ,Coordination polymer ,Oxidation state ,chemistry.chemical_element ,Nanoparticle ,Electrochemistry ,Selectivity ,Copper ,Redox ,Catalysis - Abstract
Copper (Cu) metal electrocatalysts activate the CO2 reduction reaction to produce multi electron reductants; however, the instability of the copper active species causes a change in reaction selectivity. Molecular catalysts can be designed as CO2 reduction catalysts with high selectivity, although the production of multi-electron reductants (>2e-) while maintaining the catalyst structure remains difficult. Here we present self-assembled nanoparticles of a cuprous coordination polymer (Cu-SCP) that can catalyze CO2 electrochemical reduction to C2 products, such as ethylene and ethanol, with a total faradaic efficiency of 55%. Cu-SCP maintains its metal complex structure and the Cu (I) oxidation state throughout the reaction. The Cu-SCP catalyst has advantages of being both a molecular and metal catalyst, which should open up new possibilities for CO2 reduction catalysts.
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- 2020
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15. Direct Ethanol Production from Ionic Liquid-Pretreated Lignocellulosic Biomass by Cellulase-Displaying Yeasts
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Nobuhiro Ishida, Kazunori Nakashima, Ryosuke Yamada, Akihiko Kondo, Wataru Tokuhara, Noriho Kamiya, Satoshi Katahira, Nanami Asai-Nakashima, and Chiaki Ogino
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0106 biological sciences ,Ionic Liquids ,Lignocellulosic biomass ,Biomass ,Bioengineering ,Saccharomyces cerevisiae ,Cellulase ,Ethanol fermentation ,Lignin ,01 natural sciences ,Applied Microbiology and Biotechnology ,Biochemistry ,Fungal Proteins ,010608 biotechnology ,Botany ,Cellulases ,Organic chemistry ,Ethanol fuel ,Cellulose ,Cedrus ,Molecular Biology ,Trichoderma ,Eucalyptus ,Xylose ,Ethanol ,biology ,010405 organic chemistry ,Chemistry ,Imidazoles ,food and beverages ,General Medicine ,0104 chemical sciences ,Kinetics ,Aspergillus ,Glucose ,Biofuels ,Bioconversion of biomass to mixed alcohol fuels ,Fermentation ,biology.protein ,Bagasse ,Biotechnology - Abstract
Among the many types of lignocellulosic biomass pretreatment methods, the use of ionic liquids (ILs) is regarded as one of the most promising strategies. In this study, the effects of four kinds of ILs for pretreatment of lignocellulosic biomass such as bagasse, eucalyptus, and cedar were evaluated. In direct ethanol fermentation from biomass incorporated with ILs by cellulase-displaying yeast, 1-butyl-3-methylimidazolium acetate ([Bmim][OAc]) was the most effective IL. The ethanol production and yield from [Bmim][OAc]-pretreated bagasse reached 0.81 g/L and 73.4% of the theoretical yield after fermentation for 96 h. The results prove the initial concept, in which the direct fermentation from lignocellulosic biomass effectively promoted by the pretreatment with IL.
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- 2016
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16. Hybrid Nanocellulosome Design from Cellulase Modules on Nanoparticles: Synergistic Effect of Catalytically Divergent Cellulase Modules on Cellulose Degradation Activity
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Nobuhiro Ishida, Akinori Ikeuchi, Izumi Kumagai, Hikaru Nakazawa, Domyoung Kim, Yuri Ishigaki, Mitsuo Umetsu, and Takashi Matsuyama
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biology ,Chemistry ,Nanoparticle ,General Chemistry ,Cellulase ,Cellulosomes ,Catalysis ,Hydrolysis ,Chemical engineering ,Biochemistry ,Cellulosic ethanol ,Biotinylation ,biology.protein ,Degradation (geology) - Abstract
Cellulosomes, which are assemblies of cellulases with various catalytic functions on a giant scaffoldin protein with a carbohydrate-binding module (CBM), efficiently degrade solid cellulosic biomass by means of synergistically coupled hydrolysis reactions. In this study, we constructed hybrid nanocellulosomes from the biotinylated catalytic domains (CDs) of two catalytically divergent cellulases (an endoglucanase and a processive endoglucanase) and biotinylated CBMs by clustering the domains and modules on streptavidin-conjugated nanoparticles. Nanocellulosomes constructed by separately clustering each type of CD with multiple CBMs on nanoparticles showed 5-fold enhancement in cellulase degradation activity relative to that of the corresponding free CDs, and mixtures of the two types of nanocellulosomes gradually and synergistically enhanced cellulase degradation activity as the CBM valency increased (finally, 2.5 times). Clustering the two types of CD together on the same nanoparticle resulted in a great...
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- 2013
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17. Rationally designed mineralization for selective recovery of the rare earth elements
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Takamasa Nonaka, Hideki Takagi, Akimasa Matsugami, Takaaki Hatanaka, Fumiaki Hayashi, Takao Tani, and Nobuhiro Ishida
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Lanthanide ,Metal ions in aqueous solution ,Science ,General Physics and Astronomy ,Mineralogy ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,General Biochemistry, Genetics and Molecular Biology ,Article ,Catalysis ,Metal ,chemistry.chemical_compound ,Multidisciplinary ,Aqueous solution ,Extraction (chemistry) ,General Chemistry ,Mineralization (soil science) ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,chemistry ,Chemical engineering ,visual_art ,visual_art.visual_art_medium ,Hydroxide ,0210 nano-technology - Abstract
The increasing demand for rare earth (RE) elements in advanced materials for permanent magnets, rechargeable batteries, catalysts and lamp phosphors necessitates environmentally friendly approaches for their recovery and separation. Here, we propose a mineralization concept for direct extraction of RE ions with Lamp (lanthanide ion mineralization peptide). In aqueous solution containing various metal ions, Lamp promotes the generation of RE hydroxide species with which it binds to form hydrophobic complexes that accumulate spontaneously as insoluble precipitates, even under physiological conditions (pH ∼6.0). This concept for stabilization of an insoluble lanthanide hydroxide complex with an artificial peptide also works in combination with stable scaffolds like synthetic macromolecules and proteins. Our strategy opens the possibility for selective separation of target metal elements from seawater and industrial wastewater under mild conditions without additional energy input., Lanthanide elements are difficult to separate from aqueous solution with low energy input. Here, the authors design a peptide that recognizes and drives the precipitation of an insoluble lanthanide complex under physiological conditions, introducing a biomineralization-based approach for rare earth recovery.
- Published
- 2016
18. Amino acid residues important for CMP-sialic acid recognition by the CMP-sialic acid transporter: analysis of the substrate specificity of UDP-galactose/CMP-sialic acid transporter chimeras
- Author
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Nobuhiro Ishida, Kazuhisa Aoki, Masao Kawakita, Masayoshi Sakaguchi, Yasusato Sugahara, Taro Takeshima-Futagami, Eriko Uehara, and Yutaka Sanai
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Monosaccharide Transport Proteins ,Recombinant Fusion Proteins ,Amino Acid Motifs ,Mutant ,Mutation, Missense ,Context (language use) ,CHO Cells ,Biology ,Nucleotide sugar ,Biochemistry ,Uridine Diphosphate ,Substrate Specificity ,chemistry.chemical_compound ,Residue (chemistry) ,Chimera (genetics) ,Cricetulus ,Cricetinae ,Cytidine Monophosphate ,Animals ,Galactose ,Biological Transport ,Transporter ,N-Acetylneuraminic Acid ,Transmembrane protein ,Protein Structure, Tertiary ,carbohydrates (lipids) ,Transmembrane domain ,chemistry ,Nucleotide Transport Proteins ,Tyrosine - Abstract
In our previous studies, we demonstrated that chimeric molecules of the CMP-sialic acid (CMP-Sia) transporter (CST) and the UDP-galactose (Gal) transporter (UGT) in which the seventh transmembrane helix-containing segment was derived from the CST could transport both CMP-Sia and UDP-Gal and that the CST-derived seventh transmembrane helix segment was sufficient for the chimera to recognize CMP-Sia in the otherwise UGT context. In this study, we continued to more precisely define the submolecular region that is necessary for CMP-Sia recognition, and we demonstrated that the N-terminal half of the seventh transmembrane helix of CST is essential for the CMP-Sia transport mediated by the chimeric transporters. We further showed that Tyr214Gly and Ser216Phe mutations of a chimeric transporter that was capable of transporting both CMP-Sia and UDP-Gal led to the selective loss of CMP-Sia transport activity without affecting UDP-Gal transport activity. Conversely, when a residue in a chimeric transporter that was active for UDP-Gal transport but not CMP-Sia transport was replaced by Tyr, so that Tyr occupied the same position as in the CMP-Sia transporter, the resulting mutant chimera acquired the ability to transport CMP-Sia. These results demonstrated that Tyr214 and Ser216, located in the seventh transmembrane helix of the human CST, are critically important for the recognition of CMP-Sia as a transport substrate. Identification of determinants critical for the discrimination between relevant and irrelevant substrates will advance our understanding of the mechanisms of substrate recognition by nucleotide sugar transporters.
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- 2012
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19. The effects of the cabotage deregulation
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Nobuhiro, Ishida
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683.1 - Published
- 2012
20. Ionic liquid/water interfacial localization of a green fluorescent protein fused to a tryptophan-rich peptide
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Mamoru Yamanishi, Mitsuo Umetsu, Nobuhiro Ishida, Haruo Takahashi, Izumi Kumagai, Kim Domyoung, Takashi Matsuyama, and Taiji Ikawa
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chemistry.chemical_classification ,Sulfonamides ,Recombinant Fusion Proteins ,C-terminus ,Green Fluorescent Proteins ,Imidazoles ,Tryptophan ,Ionic Liquids ,Water ,Bioengineering ,Peptide ,Applied Microbiology and Biotechnology ,Green fluorescent protein ,Serine ,chemistry.chemical_compound ,Biochemistry ,chemistry ,Phase (matter) ,Ionic liquid ,Biophysics ,Peptides ,Imide ,Biotechnology - Abstract
We report that several tryptophan-rich peptides exhibit an affinity for a hydrophobic ionic liquid (IL) (1-ethyl-3-methylimidazolium bis-trifluoromethanesulfonyl imide), and that green fluorescent protein (GFP) fused to a peptides, “SSSWWSWWWW” (SW1) or “SWWWWSWWWW” (SW2), containing serine (S) and tryptophan (W) at the C terminus localized at the IL/water interface. While GFPs without W-rich peptide distributed only in water phase, SW1- and SW2-GFPs were accumulated at the interface. The localization of SW1-GFP showed biphasic behavior, and most distinctive localization was observed at 7.1 μM. The localization of SW2-GFP presumably occurred at largely lower concentration (≤ 0.5 μM) than that of SW1-GFP, which difference was due to the higher hydrophobicity of SW2 peptide.
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- 2012
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21. Characterization of rice nucleotide sugar transporters capable of transporting UDP-galactose and UDP-glucose
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Yasuhiro Hashimoto, Nobuhiro Ishida, Shou Takashima, Takeshi Nakano, Masafumi Tsujimoto, Junichi Seino, and Kumiko Ishii
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Uridine Diphosphate Glucose ,Nucleotide-sugar transport ,Molecular Sequence Data ,Intracellular Space ,Golgi Apparatus ,CHO Cells ,Saccharomyces cerevisiae ,Genes, Plant ,Nucleotide sugar ,Biochemistry ,Uridine Diphosphate Galactose ,chemistry.chemical_compound ,Cricetulus ,Gene Expression Regulation, Plant ,Cricetinae ,Animals ,Humans ,Arabidopsis thaliana ,Amino Acid Sequence ,Cloning, Molecular ,Molecular Biology ,Peptide sequence ,Gene ,Phylogeny ,Plant Proteins ,Genetics ,biology ,Genetic Complementation Test ,Nucleic acid sequence ,Membrane Transport Proteins ,food and beverages ,Oryza ,Transporter ,General Medicine ,biology.organism_classification ,Recombinant Proteins ,carbohydrates (lipids) ,Protein Transport ,chemistry ,Uridine diphosphate glucose - Abstract
Using the basic local alignment search tool (BLAST) algorithm to search the Oryza sativa (Japanese rice) nucleotide sequence databases with the Arabidopsis thaliana UDP-galactose transporter sequences as queries, we found a number of sequences encoding putative O. sativa UDP-galactose transporters. From these, we cloned four putative UDP-galactose transporters, designated OsUGT1, 2, 3 and 4, which exhibited high sequence similarity with Arabidopsis thaliana UDP-galactose transporters. OsUGT1, 2, 3 and 4 consisted of 350, 337, 345 and 358 amino acids, respectively, and all of these proteins were predicted to have multiple transmembrane domains. To examine the UDP-galactose transporter activity of the OsUGTs, we introduced the OsUGTs' expression vectors into UDP-galactose transporter activity-deficient Lec8 cells. Our results showed that transfection with OsUGT1, 2 and 3 resulted in recovery of the deficit phenotype of Lec8 cells, but transfection with OsUGT4 did not. The results of an in vitro nucleotide sugar transport assay of OsUGTs, carried out with a yeast expression system, suggested that OsUGT4 is a UDP-glucose transporter rather than a UDP-galactose transporter. Although plants have multiple UDP-galactose transporter genes, phylogenic analysis indicates that plant UDP-galactose transporter genes are not necessarily evolutionary related to each other.
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- 2010
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22. On Improvements in Loading and Unloading at Osaka Container Port
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Nobuhiro Ishida
- Abstract
研究, 商学部創立60周年記念号
- Published
- 2010
23. Analysis of CMP-sialic acid transporter-like proteins in plants
- Author
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Masafumi Tsujimoto, Yasuhiro Hashimoto, Shou Takashima, Junichi Seino, Nobuhiro Ishida, Kazuhito Fujiyama, and Takeshi Nakano
- Subjects
DNA, Bacterial ,DNA, Complementary ,Nucleotide-sugar transport ,Arabidopsis ,Organic Anion Transporters ,Saccharomyces cerevisiae ,Plant Science ,Horticulture ,Genes, Plant ,Transfection ,Nucleotide sugar ,Biochemistry ,chemistry.chemical_compound ,Microsomes ,Arabidopsis thaliana ,Nucleotide ,Molecular Biology ,Gene ,Plant Proteins ,chemistry.chemical_classification ,Symporters ,biology ,Nucleotides ,Sugar Acids ,Biological Transport ,Oryza ,Transporter ,General Medicine ,biology.organism_classification ,Sialic acid ,carbohydrates (lipids) ,chemistry ,Cytidine Monophosphate N-Acetylneuraminic Acid ,Transcription Factors - Abstract
It is commonly accepted that sialic acids do not exist in plants. However, putative gene homologs of animal sialyltransferases and CMP-sialic acid transporters have been detected in the genomes of some plants. To elucidate the physiological functions of these genes, we cloned 2 cDNAs from Oryza sativa (Japanese rice), each of which encodes a CMP-sialic acid transporter-like protein designated as OsCSTLP1 and OsCSTLP2. To examine the CMP-sialic acid transporter activity of OsCSTLP1 and OsCSTLP2, we introduced their expression vectors into CMP-sialic acid transporter activity-deficient Lec2 cells. Transfection with OsCSTLP1 resulted in recovery of the deficit phenotype of Lec2 cells, but transfection with OsCSTLP2 did not. We also performed an in vitro nucleotide sugar transport assay using a yeast expression system. Among the nucleotide sugars examined, the OsCSTLP1-containing yeast microsomal membrane vesicles specifically incorporated CMP-sialic acid, indicating that OsCSTLP1 has CMP-sialic acid transporter activity. On the other hand, OsCSTLP2 did not exhibit any nucleotide sugar transporter activity. T-DNA insertion lines of Arabidopsis thaliana targeting the homologs of the OsCSTLP1 and OsCSTLP2 genes exhibited a lethal phenotype, suggesting that these proteins play important roles in plant development and may transport important nucleotide sugars such as CMP-Kdo in physiological conditions.
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- 2009
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24. Fermentative lactic acid production with a metabolically engineered yeast immobilized in photo-crosslinkable resins
- Author
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Min-Tian Gao, Haruo Takahashi, Nobuhiro Ishida, and Takashi Shimamura
- Subjects
Environmental Engineering ,Chromatography ,biology ,Chemistry ,Extraction (chemistry) ,Saccharomyces cerevisiae ,technology, industry, and agriculture ,Biomedical Engineering ,food and beverages ,Bioengineering ,biology.organism_classification ,Yeast ,Lactic acid ,Metabolic engineering ,chemistry.chemical_compound ,Biochemistry ,Biocatalysis ,Fermentation ,Lactic acid fermentation ,Biotechnology - Abstract
In this study, the immobilization technique involving photo-crosslinkable resin gels was used for lactic acid production. Saccharomyces cerevisiae OC-2T T165R, a metabolically engineered yeast that produces optically pure l (+)-lactic acid, was immobilized in hydrophilic photo-crosslinked resin gels as a biocatalyst. Three resin gels, TEP 1, TEP 2 and TEP 3, were examined and all of them showed high performance as to lactic acid production. Resin gel TEP 1, which exhibited the highest productivity among the resin gels was used for 15 consecutive batch fermentations without decreases in productivity and mechanical deformation, indicating that it was a suitable carrier for long-term lactic acid fermentation. Moreover, the use of the immobilization technique can improve the productivity of the metabolically engineered yeast in the fermentation with or without extraction, showing promise for using the immobilized engineered yeast for lactic acid production.
- Published
- 2009
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25. Application of metabolically engineered Saccharomyces cerevisiae to extractive lactic acid fermentation
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Takashi Shimamura, Min-Tian Gao, Nobuhiro Ishida, and Haruo Takahashi
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Environmental Engineering ,Tertiary amine ,Extraction (chemistry) ,Biomedical Engineering ,food and beverages ,Bioengineering ,Biology ,Yeast ,Lactic acid ,Solvent ,Metabolic engineering ,chemistry.chemical_compound ,chemistry ,Biochemistry ,Fermentation ,Food science ,Lactic acid fermentation ,Biotechnology - Abstract
In this study, Saccharomyces cerevisiae OC-2T T165R, metabolically engineered to produce optically pure L(+)-lactic acid, was used to develop a high performance extractive fermentation process. Since the transgenic yeast could produce lactic acid efficiently even at lower than pH 3.5, high extractive efficiency was achieved when tri-n-decylamine (TDA), a tertiary amine, was used as the extractant. Separation of microorganisms by means of a hollow fiber module could not only improve the total amount of lactic acid produced but also increase the lactic acid concentration in the solvent. Moreover, pH had a significant effect on extractive fermentation. The highest rate of recovery of lactic acid could be obtained on pH-uncontrolled fermentation (pH 2.5); however, the lowest amount of lactic acid was produced. Taking into account the trade-off between the fermentation and extraction efficiencies, the optimum pH value was considered to be 3.5, with which the largest amount of lactic acid was produced and the highest lactic acid concentration in the solvent was obtained. The results show promise for the use of the transgenic yeast for extractive fermentation.
- Published
- 2009
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26. Extractive lactic acid fermentation with tri-n-decylamine as the extractant
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Haruo Takahashi, Nobuhiro Ishida, Shinji Umemoto, Takeshi Omasa, Eiji Nagamori, Hisao Ohtake, Min-Tian Gao, and Takashi Shimamura
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Chromatography ,biology ,Extraction (chemistry) ,Saccharomyces cerevisiae ,food and beverages ,Bioengineering ,biology.organism_classification ,Applied Microbiology and Biotechnology ,Biochemistry ,Recombinant yeast ,Yeast ,Lactic acid ,chemistry.chemical_compound ,chemistry ,Fermentation ,Inhibitory effect ,Lactic acid fermentation ,Biotechnology - Abstract
In this study, the possibility of tri-n-decylamine (TDA) was investigated as the extractant in extractive lactic acid fermentation with a recombinant yeast being used. Extractive fermentation with TDA did not provide high l -lactic acid production relative to fermentation without extraction. Through determination of trace components of the TDA, it was found that the TDA contained a high concentration of 1-decylaldehyde, which was confirmed to be toxic to yeast and to have an inhibitory effect on cell growth even at low concentration (40 ppm). When 1-decylaldehyde in TDA was reduced from 700 ppm to 33 ppm, the productivity and total concentration of lactic acid increased by 1.8 times and 2.5 times, respectively.
- Published
- 2009
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27. Double mutation of the PDC1 and ADH1 genes improves lactate production in the yeast Saccharomyces cerevisiae expressing the bovine lactate dehydrogenase gene
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Akihiko Kondo, Haruo Takahashi, Nobuhiro Ishida, Eiji Nagamori, Toru Onishi, Kenro Tokuhiro, and Satoshi Saitoh
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Saccharomyces cerevisiae Proteins ,Saccharomyces cerevisiae ,Biology ,Applied Microbiology and Biotechnology ,Industrial Microbiology ,chemistry.chemical_compound ,Bioreactors ,Lactate dehydrogenase ,Animals ,Lactic Acid ,Ethanol metabolism ,Pyruvates ,Alcohol dehydrogenase ,Ethanol ,L-Lactate Dehydrogenase ,Alcohol Dehydrogenase ,General Medicine ,biology.organism_classification ,Yeast ,Lactic acid ,Glucose ,Biochemistry ,chemistry ,Mutagenesis ,Fermentation ,biology.protein ,Cattle ,Genetic Engineering ,Pyruvate Decarboxylase ,Lactic acid fermentation ,Pyruvate decarboxylase ,Biotechnology - Abstract
Expression of a heterologous L: -lactate dehydrogenase (L: -ldh) gene enables production of optically pure L: -lactate by yeast Saccharomyces cerevisiae. However, the lactate yields with engineered yeasts are lower than those in the case of lactic acid bacteria because there is a strong tendency for ethanol to be competitively produced from pyruvate. To decrease the ethanol production and increase the lactate yield, inactivation of the genes that are involved in ethanol production from pyruvate is necessary. We conducted double disruption of the pyruvate decarboxylase 1 (PDC1) and alcohol dehydrogenase 1 (ADH1) genes in a S. cerevisiae strain by replacing them with the bovine L: -ldh gene. The lactate yield was increased in the pdc1/adh1 double mutant compared with that in the single pdc1 mutant. The specific growth rate of the double mutant was decreased on glucose but not affected on ethanol or acetate compared with in the control strain. The aeration rate had a strong influence on the production rate and yield of lactate in this strain. The highest lactate yield of 0.75 g lactate produced per gram of glucose consumed was achieved at a lower aeration rate.
- Published
- 2009
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28. Modification of the surface carbohydrate composition of tobacco protoplasts transformed with the human UDP-galactose transporter gene hUGT1
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Mohamed Farouk Mohamed Khalil, Tetsuya Kawahara, Nobukazu Tanaka, Nobuhiro Ishida, and Takahiro Horibe
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Streptavidin ,biology ,Lectin ,Plant Science ,Cell sorting ,Molecular biology ,Fluorescence ,Staining ,chemistry.chemical_compound ,chemistry ,Biochemistry ,Biotinylation ,Fluorescence microscope ,biology.protein ,Fluorescein isothiocyanate ,Agronomy and Crop Science ,Biotechnology - Abstract
Tobacco BY-2 cells were transformed with the human UDP-galactose transporter 1 gene (hUGT1) under the control of a 35S promoter. Accumulation of mRNA and protein derived from hUGT1 was detected in the hUGT1- transformed BY-2 cells. To identify the cell surface carbohydrates, BY-2 protoplasts were treated with 21 kinds of biotinylated lectin, stained with fluorescein isothiocyanate (FITC)-conjugated streptavidin and observed by fluorescence microscopy. FITC-ConA and -RCA120 staining exhibited strong fluorescence on the surface of BY-2 protoplasts, whereas staining with other FITC-lectin conjugates showed faint or no fluorescence. Regarding FITC-ConA and -RCA120 staining, the fluorescence of hUGT-expressing BY-2 protoplasts was weaker than that of control cells. Decreased FITC fluorescence of hUGT-expressing BY-2 protoplasts was also detected by fluorescence-activated cell sorting (FACS) analysis, suggesting that the surface carbohydrate composition was modified.
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- 2009
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29. Nucleotide-sugar transporter SLC35D1 is critical to chondroitin sulfate synthesis in cartilage and skeletal development in mouse and human
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Akiko Kinoshita-Toyoda, Haruhiko Koseki, Andrea Superti-Furga, Peter G. J. Nikkels, David L. Rimoin, Daniel H. Cohn, Masaki Yanagishita, Kyoichi Isono, Kayoko Katsuyama, Gen Nishimura, Shunichi Shibata, Yutaka Sanai, Minako Ogawa, Tatsuya Furuichi, Nobuhiro Ishida, Shiro Ikegawa, Shuichi Hiraoka, and Hidenao Toyoda
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Monosaccharide Transport Proteins ,Limb Deformities, Congenital ,Mice, Transgenic ,Cartilage metabolism ,Bone and Bones ,Facial Bones ,General Biochemistry, Genetics and Molecular Biology ,Glycosaminoglycan ,Mice ,chemistry.chemical_compound ,Chondrocytes ,medicine ,Animals ,Humans ,Chondroitin ,Chondroitin sulfate ,Cells, Cultured ,Aggrecan ,Mice, Knockout ,biology ,Chemistry ,Cartilage ,Chondroitin Sulfates ,General Medicine ,Chondrogenesis ,carbohydrates (lipids) ,medicine.anatomical_structure ,Proteoglycan ,Biochemistry ,Nucleotide Transport Proteins ,biology.protein ,Epiphyses - Abstract
Proteoglycans are a family of extracellular macromolecules comprised of glycosaminoglycan chains of a repeated disaccharide linked to a central core protein1,2. Proteoglycans have critical roles in chondrogenesis and skeletal development. The glycosaminoglycan chains found in cartilage proteoglycans are primarily composed of chondroitin sulfate3. The integrity of chondroitin sulfate chains is important to cartilage proteoglycan function; however, chondroitin sulfate metabolism in mammals remains poorly understood. The solute carrier-35 D1 (SLC35D1) gene (SLC35D1) encodes an endoplasmic reticulum nucleotide-sugar transporter (NST) that might transport substrates needed for chondroitin sulfate biosynthesis4,5. Here we created Slc35d1-deficient mice that develop a lethal form of skeletal dysplasia with severe shortening of limbs and facial structures. Epiphyseal cartilage in homozygous mutant mice showed a decreased proliferating zone with round chondrocytes, scarce matrices and reduced proteoglycan aggregates. These mice had short, sparse chondroitin sulfate chains caused by a defect in chondroitin sulfate biosynthesis. We also identified that loss-of-function mutations in human SLC35D1 cause Schneckenbecken dysplasia, a severe skeletal dysplasia. Our findings highlight the crucial role of NSTs in proteoglycan function and cartilage metabolism, thus revealing a new paradigm for skeletal disease and glycobiology.
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- 2007
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30. Variety of Nucleotide Sugar Transporters with Respect to the Interaction with Nucleoside Mono- and Diphosphates
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Masatoshi Muraoka, Masao Kawakita, Takahiko Hara, Toshiaki Miki, and Nobuhiro Ishida
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Monosaccharide Transport Proteins ,Antiporter ,Saccharomyces cerevisiae ,Carbohydrates ,Nucleotide sugar ,Models, Biological ,Biochemistry ,Fungal Proteins ,chemistry.chemical_compound ,Microsomes ,Animals ,Humans ,Molecular Biology ,Dose-Response Relationship, Drug ,biology ,Biological Transport ,Cell Biology ,biology.organism_classification ,Antiporters ,Yeast ,Diphosphates ,carbohydrates (lipids) ,chemistry ,Liposomes ,Nucleotide Transport Proteins ,Uridine Diphosphate Glucuronic Acid ,Microsome ,Drosophila ,Efflux ,Nucleoside - Abstract
Nucleotide sugar transporters have long been assumed to be antiporters that exclusively use nucleoside monophosphates as antiport substrates. Here we present evidence indicating that two other types of nucleotide sugar transporters exist that differ in their antiport substrate specificity. Biochemical studies using microsomes derived from Saccharomyces cerevisiae cells expressing either human (h) UGTrel7 or the Drosophila (d) FRC (Fringe connection) transporter revealed that (i) efflux of preloaded UDP-glucuronic acid from the yeast microsomes expressing hUGTrel7 was strongly enhanced by UDP-GlcNAc added in the external medium, but not by UMP or UDP, suggesting that hUGTrel7 may be described as a UDP-sugar/UDP-sugar antiporter, and (ii) addition of UDP-sugars, UDP, or UMP in the external medium stimulated the efflux of preloaded UDP-GlcNAc from the yeast microsomes expressing dFRC to a comparable extent, suggesting that UDP, as well as UMP, may serve as an antiport substrate of dFRC. Antiport of UDP-sugars with these specific substrates was reproduced and definitively confirmed using proteoliposomes reconstituted from solubilized and purified transporters. Possible physiological implications of these observations are discussed.
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- 2007
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31. Multidimensional High-Resolution Magic Angle Spinning and Solution-State NMR Characterization of 13C-labeled Plant Metabolites and Lignocellulose
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Nobuhiro Ishida, Tetsuya Mori, Nobuyuki Nishikubo, Jun Kikuchi, Yuuri Tsuboi, and Taku Demura
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Carbon Isotopes ,Magnetic Resonance Spectroscopy ,Multidisciplinary ,Materials science ,Solution state ,Quantitative Biology::Tissues and Organs ,fungi ,Analytical chemistry ,food and beverages ,High resolution ,Plants ,Plants, Genetically Modified ,Lignin ,Article ,Characterization (materials science) ,Solutions ,Populus ,Pyrimidines ,Cell Wall ,Polysaccharides ,Botany ,Magic angle spinning ,Dimethyl Sulfoxide ,Condensed Matter::Strongly Correlated Electrons - Abstract
Lignocellulose, which includes mainly cellulose, hemicellulose and lignin, is a potential resource for the production of chemicals and for other applications. For effective production of materials derived from biomass, it is important to characterize the metabolites and polymeric components of the biomass. Nuclear magnetic resonance (NMR) spectroscopy has been used to identify biomass components; however, the NMR spectra of metabolites and lignocellulose components are ambiguously assigned in many cases due to overlapping chemical shift peaks. Using our 13C-labeling technique in higher plants such as poplar samples, we demonstrated that overlapping peaks could be resolved by three-dimensional NMR experiments to more accurately assign chemical shifts compared with two-dimensional NMR measurements. Metabolites of the 13C-poplar were measured by high-resolution magic angle spinning NMR spectroscopy, which allows sample analysis without solvent extraction, while lignocellulose components of the 13C-poplar dissolved in dimethylsulfoxide/pyridine solvent were analyzed by solution-state NMR techniques. Using these methods, we were able to unambiguously assign chemical shifts of small and macromolecular components in 13C-poplar samples. Furthermore, using samples of less than 5 mg, we could differentiate between two kinds of genes that were overexpressed in poplar samples, which produced clearly modified plant cell wall components.
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- 2015
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32. UDP-galactose transporter gene hUGT1 expression in tobacco plants leads to hyper-galactosylated cell wall components
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Nobukazu Tanaka, Mohamed Farouk Mohamed Khalil, Kenji Kitamura, Tayebeh Abedi, Toshihiko Asai, Nami Ishihara, and Nobuhiro Ishida
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0106 biological sciences ,0301 basic medicine ,Monosaccharide Transport Proteins ,Gene Expression ,Golgi Apparatus ,Bioengineering ,Biology ,Polysaccharide ,01 natural sciences ,Applied Microbiology and Biotechnology ,Cell wall ,03 medical and health sciences ,chemistry.chemical_compound ,Cytosol ,Cell Wall ,Polysaccharides ,Tobacco ,Monosaccharide ,Humans ,Hemicellulose ,Glucans ,chemistry.chemical_classification ,food and beverages ,Galactose ,Biological Transport ,Plants, Genetically Modified ,Recombinant Proteins ,Xyloglucan ,030104 developmental biology ,chemistry ,Biochemistry ,Pectins ,Xylans ,Secondary cell wall ,010606 plant biology & botany ,Biotechnology - Abstract
We reported previously that tobacco plants transformed with the human UDP-galactose transporter 1 gene (hUGT1-transgenic plants) displayed morphological, architectural, and physiological alterations, such as enhanced growth, increased accumulation of chlorophyll and lignin, and a gibberellin-responsive phenotype. In the present study, we demonstrated that hUGT1 expression altered the monosaccharide composition of cell wall matrix polysaccharides, such as pectic and hemicellulosic polysaccharides, which are biosynthesized in the Golgi lumen. An analysis of the monosaccharide composition of the cell wall matrix polysaccharides revealed that the ratio of galactose to total monosaccharides was significantly elevated in the hemicellulose II and pectin fractions of hUGT1-transgenic plants compared with that of control plants. A hyper-galactosylated xyloglucan structure was detected in hemicellulose II using oligosaccharide mass profiling. These results indicated that, because of the enhanced UDP-galactose transport from the cytosol to the Golgi apparatus by hUGT1, galactose incorporation in the cell wall matrix polysaccharides increased. This increased galactose incorporation may have contributed to increased galactose tolerance in hUGT1-transgenic plants.
- Published
- 2015
33. The Effect of Pyruvate Decarboxylase Gene Knockout inSaccharomyces cerevisiaeon<scp>L</scp>-Lactic Acid Production
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Kenro Tokuhiro, Toru Onishi, Haruo Takahashi, Eiji Nagamori, Satoshi Saitoh, Nobuhiro Ishida, and Katsuhiko Kitamoto
- Subjects
Saccharomyces cerevisiae Proteins ,Carboxy-lyases ,Genes, Fungal ,Saccharomyces cerevisiae ,Dehydrogenase ,Applied Microbiology and Biotechnology ,Biochemistry ,Analytical Chemistry ,chemistry.chemical_compound ,Bioreactors ,Lactic Acid ,Molecular Biology ,Gene knockout ,biology ,Organic Chemistry ,food and beverages ,General Medicine ,biology.organism_classification ,Yeast ,Lactic acid ,chemistry ,Fermentation ,Mutation ,Genetic Engineering ,Pyruvate Decarboxylase ,Pyruvate decarboxylase ,Biotechnology - Abstract
A plant- and crop-based renewable plastic, poly-lactic acid (PLA), is receiving attention as a new material for a sustainable society in place of petroleum-based plastics. We constructed a metabolically engineered Saccharomyces cerevisiae that has both pyruvate decarboxylase genes (PDC1 and PDC5) disrupted in the genetic background to express two copies of the bovine L-lactate dehydrogenase (LDH) gene. With this recombinant, the yield of lactate was 82.3 g/liter, up to 81.5% of the glucose being transformed into lactic acid on neutralizing cultivation, although pdc1 pdc5 double disruption led to ineffective decreases in cell growth and fermentation speed. This strain showed lactate productivity improvement as much as 1.5 times higher than the previous strain. This production yield is the highest value for a lactic acid-producing yeast yet reported.
- Published
- 2006
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34. Structure of Domestic Freight Transport System in Japan
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Nobuhiro, Ishida
- Abstract
研究, 二村重博教授 定年退職記念号
- Published
- 2006
35. The Efficiency in International Freight Transport in the Asian Region
- Author
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Nobuhiro, Ishida
- Abstract
研究, 玉村和彦教授 定年退職記念号
- Published
- 2006
36. d-Lactic acid production by metabolically engineered Saccharomyces cerevisiae
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Kenro Tokuhiro, Haruo Takahashi, Tomiko Suzuki, Toru Onishi, Eiji Nagamori, Satoshi Saitoh, Nobuhiro Ishida, and Katsuhiko Kitamoto
- Subjects
Saccharomyces cerevisiae Proteins ,Molecular Sequence Data ,Bioengineering ,Saccharomyces cerevisiae ,Applied Microbiology and Biotechnology ,Neutralization ,Metabolic engineering ,chemistry.chemical_compound ,Leuconostoc ,Amino Acid Sequence ,Lactic Acid ,Cloning, Molecular ,chemistry.chemical_classification ,Base Sequence ,L-Lactate Dehydrogenase ,Sequence Homology, Amino Acid ,biology ,food and beverages ,biology.organism_classification ,Recombinant Proteins ,Lactic acid ,Amino acid ,chemistry ,Biochemistry ,Leuconostoc mesenteroides ,Fermentation ,Lactates ,Genetic Engineering ,Pyruvate Decarboxylase ,Pyruvate decarboxylase ,Biotechnology - Abstract
Poly D-lactic acid is an important polymer because it improves the thermostability of poly L-lactic acid by the stereo complex formation. We constructed a metabolically engineered Saccharomyces cerevisiae that produces D-lactic acid efficiently. In this recombinant, the coding region of pyruvate decarboxylase 1 (PDC1) was completely deleted, and two copies of the D-lactate dehydrogenase (D-LDH) gene from Leuconostoc mesenteroides subsp. mesenteroides strain NBRC3426 were introduced into the genome. The D-lactate production reached 61.5 g/l, the amount of glucose being transformed into D-lactic acid being 61.2% under neutralizing conditions. Additionally, the yield of free D-lactic acid was also shown to be 53.0% under non-neutralizing conditions. It was confirmed that D-lactic acid of extremely high optical purity of 99.9% or higher. Our finding obtained the possibility of a new approach for pure d-lactic acid production without a neutralizing process compared with other techniques involving lactic acid bacteria and transgenic Escherichia coli.
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- 2006
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37. Identification and characterization of human Golgi nucleotide sugar transporter SLC35D2, a novel member of the SLC35 nucleotide sugar transporter family
- Author
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Nobuhiro Ishida, Shoichiro Miyatake, Kazuhisa Aoki, Yutaka Sanai, Toshiyasu Kuba, and Masao Kawakita
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DNA, Complementary ,Monosaccharide Transport Proteins ,Molecular Sequence Data ,Golgi Apparatus ,CHO Cells ,Saccharomyces cerevisiae ,Biology ,Nucleotide sugar ,chemistry.chemical_compound ,Cricetinae ,Sequence Homology, Nucleic Acid ,Complementary DNA ,Genetics ,Animals ,Humans ,Gene family ,Amino Acid Sequence ,Peptide sequence ,Receptors, Notch ,Membrane Proteins ,Membrane Transport Proteins ,Transporter ,Intracellular Membranes ,Solute carrier family ,Transmembrane domain ,Biochemistry ,chemistry ,Nucleotide Transport Proteins ,Heterologous expression ,Chromosomes, Human, Pair 9 ,Signal Transduction - Abstract
We report the molecular cloning of SLC35D2, a novel member of the SLC35 nucleotide sugar transporter family. The gene SLC35D2 maps to chromosome 9q22.33. SLC35D2 cDNA codes for a hydrophobic protein consisting of 337 amino acid residues with 10 putative transmembrane helices. Northern blot analysis revealed the SLC35D2 mRNA as a single major band corresponding to 2.0 kb in length. SLC35D2 was localized in the Golgi membrane and exhibited around 50% similarity with three nucleotide sugar transporters: human SLC35D1 (UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter), fruitfly fringe connection (frc) transporter, and nematode SQV-7 transporter, the latter two being involved in developmental and organogenetic processes. Heterologous expression of SLC35D2 protein in yeast indicated that UDP-N-acetylglucosamine is a candidate for the substrate(s) of the transporter. The sequence similarity, subcellular localization, and transporting substrate suggest that SLC35D2 is a good candidate for the ortholog of frc transporter, which is involved in the Notch signaling system by providing the fringe N-acetylglucosaminyltransferase with the substrate. We also describe the identification and categorization of the human SLC35 gene family.
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- 2005
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38. Hypoxia induces adhesion molecules on cancer cells: A missing link between Warburg effect and induction of selectin-ligand carbohydrates
- Author
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Tetsufumi, Koike, Naoko, Kimura, Keiko, Miyazaki, Tomonori, Yabuta, Kensuke, Kumamoto, Seiichi, Takenoshita, Jian, Chen, Masanobu, Kobayashi, Masuo, Hosokawa, Akiyoshi, Taniguchi, Tetsuhito, Kojima, Nobuhiro, Ishida, Masao, Kawakita, Harumi, Yamamoto, Hiromu, Takematsu, Akemi, Suzuki, Yasunori, Kozutsumi, Reiji, Kannagi, and Reiji, Kanangi
- Subjects
Transcription, Genetic ,Carbohydrates ,Cell Culture Techniques ,Oligosaccharides ,Integrin alpha5 ,Biology ,Ligands ,chemistry.chemical_compound ,Lewis Blood Group Antigens ,Genes, Reporter ,Cell Line, Tumor ,Neoplasms ,Cell Adhesion ,Humans ,Antigens, Tumor-Associated, Carbohydrate ,RNA, Messenger ,Hypoxia ,Luciferases ,Promoter Regions, Genetic ,Sialyl Lewis X Antigen ,Cell adhesion ,Membrane Glycoproteins ,Multidisciplinary ,Cell adhesion molecule ,Biological Sciences ,Sialyl-Lewis A ,Molecular biology ,Warburg effect ,Cell biology ,Gene Expression Regulation, Neoplastic ,Sialyl-Lewis X ,chemistry ,Cell culture ,Cancer cell ,Selectins ,Carbohydrate Metabolism ,Proteoglycans ,Syndecan-4 ,Cell Adhesion Molecules ,Selectin - Abstract
Cancer cells undergo distinct metabolic changes to cope with their hypoxic environment. These changes are achieved at least partly by the action of transcriptional factors called hypoxia-inducible factors (HIFs). We investigated gene expression in cultured human colon cancer cells induced by hypoxic conditions with special reference to cell-adhesion molecules and carbohydrate determinants having cell-adhesive activity by using DNA-microarray and RT-PCR techniques. Hypoxic culture of colon cancer cells induced a marked increase in expression of selectin ligands, the sialyl Lewis x and sialyl Lewis a determinants at the cell surface, which led to a definite increase in cancer cell adhesion to endothelial E-selectin. The transcription of genes for fucosyltransferase VII ( FUT7 ), sialyltransferase ST3Gal-I ( ST3O ), and UDP-galactose transporter-1 ( UGT1 ), which are all known to be involved in the synthesis of the carbohydrate ligands for E-selectin, was significantly induced in cancer cells by hypoxic culture. In addition, a remarkable induction was detected in the genes for syndecan-4 ( SDC4 ) and α5-integrin ( ITGA5 ), the cell-adhesion molecules involved in the enhanced adhesion of cancer cells to fibronectin. The transcriptional induction by hypoxia was reproduced in the luciferase-reporter assays for these genes, which were significantly suppressed by the co-transfection of a dominant-negative form of HIF. These results indicate that the metabolic shifts of cancer cells partly mediated by HIFs significantly enhance their adhesion to vascular endothelial cells, through both selectin- and integrin-mediated pathways, and suggest that this enhancement further facilitates hematogenous metastasis of cancers and tumor angiogenesis.
- Published
- 2004
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39. Molecular physiology and pathology of the nucleotide sugar transporter family (SLC35)
- Author
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Nobuhiro Ishida and Masao Kawakita
- Subjects
Cellular immunity ,Monosaccharide Transport Proteins ,Physiology ,Clinical Biochemistry ,Biology ,Nucleotide sugar ,chemistry.chemical_compound ,symbols.namesake ,Neoplasms ,Physiology (medical) ,medicine ,Animals ,Humans ,Leukocyte adhesion deficiency ,Nucleotides ,Endoplasmic reticulum ,Biological Transport ,Transporter ,Golgi apparatus ,medicine.disease ,Congenital disorder of glycosylation type IIc ,Solute carrier family ,chemistry ,Biochemistry ,Multigene Family ,symbols - Abstract
The solute carrier family SLC35 consists of at least 17 molecular species in humans. The family members so far characterized encode nucleotide sugar transporters localizing at the Golgi apparatus and/or the endoplasmic reticulum (ER). These transporters transport nucleotide sugars pooled in the cytosol into the lumen of these organelles, where most glycoconjugate synthesis occurs. Pathological analyses and developmental studies of small, multicellular organisms deficient in nucleotide sugar transporters have shown these transporters to be involved in tumour metastasis, cellular immunity, organogenesis and morphogenesis. Leukocyte adhesion deficiency type II (LAD II) or the congenital disorder of glycosylation type IIc (CDG IIc) are the sole human congenital disorders known to date that are caused by a defect of GDP-fucose transport. Along with LAD II, the possible involvement of nucleotide sugar transporters in disorders of connective tissues and muscles is also discussed.
- Published
- 2004
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40. Fed-batch system for cultivating genetically engineered yeast that produces lactic acid via the fermentative promoter
- Author
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Kenro Tokuhiro, Hideaki Fujita, Nobuhiro Ishida, Eiji Nagamori, Haruo Takahashi, and Kazunori Shimizu
- Subjects
Sucrose ,Saccharomyces cerevisiae Proteins ,Time Factors ,Bioengineering ,Saccharomyces cerevisiae ,Biology ,Applied Microbiology and Biotechnology ,Metabolic engineering ,chemistry.chemical_compound ,Bioreactors ,Lactic Acid ,Promoter Regions, Genetic ,Ethanol ,Strain (biology) ,Carbon Dioxide ,Hydrogen-Ion Concentration ,Yeast ,Fed-batch culture ,Lactic acid ,Respiratory quotient ,Metabolic Engineering ,Biochemistry ,chemistry ,Fermentation ,Crabtree effect ,Genetic Engineering ,Pyruvate Decarboxylase ,Biotechnology - Abstract
A simple fed-batch system for cultivating genetically engineered yeast generating lactate under the regulation of the PDC1 promoter was established. Traditional strategies that avoid occurrence of Crabtree effect, such as respiratory quotient (RQ) control or ethanol control, are not applicable to the strain because of reduced generation of ethanol and CO(2) by-products. In this system, the feed rate increased when the pH was5.0, and decreased when the pH was5.0. Using this system, cell yields on sucrose increased by approximately 30% compared to that with the conventional RQ control method, due to the early detection of occurrence of Crabtree effect by pH decrease.
- Published
- 2013
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41. The Air Freight Transport in the 1990's Asia
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Nobuhiro, Ishida
- Abstract
研究
- Published
- 2003
42. Human andDrosophilaUDP-galactose transporters transport UDP-N-acetylgalactosamine in addition to UDP-galactose
- Author
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Hiroaki Segawa, Nobuhiro Ishida, and Masao Kawakita
- Subjects
Mutation ,Mutant ,Saccharomyces cerevisiae ,Transporter ,Biology ,medicine.disease_cause ,biology.organism_classification ,Biochemistry ,Transport protein ,N-Acetylgalactosamine ,carbohydrates (lipids) ,chemistry.chemical_compound ,Transmembrane domain ,chemistry ,medicine ,Drosophila melanogaster - Abstract
A putative Drosophila nucleotide sugar transporter was characterized and shown to be the Drosophila homologue of the human UDP-Gal transporter (hUGT). When the Drosophila melanogaster UDP-Gal transporter (DmUGT) was expressed in mammalian cells, the transporter protein was localized in the Golgi membranes and complemented the UDP-Gal transport deficiency of Lec8 cells but not the CMP-Sia transport deficiency of Lec2 cells. DmUGT and hUGT were expressed in Saccharomyces cerevisiae cells in functionally active forms. Using microsomal vesicles isolated from Saccharomyces cerevisiae expressing these transporters, we unexpectedly found that both hUGT and DmUGT could transport UDP-GalNAc as well as UDP-Gal. When amino-acid residues that are conserved among human, murine, fission yeast and Drosophila UGTs, but are distinct from corresponding ones conserved among CMP-Sia transporters (CSTs), were substituted by those found in CST, the mutant transporters were still active in transporting UDP-Gal. One of these mutants in which Asn47 was substituted by Ala showed aberrant intracellular distribution with concomitant destabilization of the protein product. However, this mutation was suppressed by an Ile51 to Thr second-site mutation. Both residues were localized within the first transmembrane helix, suggesting that the structure of the helix contributes to the stabilization and substrate recognition of the UGT molecule.
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- 2002
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43. Substrate Recognition by UDP-galactose and CMP-sialic Acid Transporters
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Masao Kawakita, Nobuhiro Ishida, and Kazuhisa Aoki
- Subjects
Chimera (genetics) ,Transmembrane domain ,Golgi membrane ,Biochemistry ,Nucleotide-sugar transport ,Mutant ,Transporter ,Cell Biology ,Heterologous expression ,Biology ,Molecular Biology ,In vitro - Abstract
Human UDP-galactose transporter (hUGT1) and CMP-sialic acid transporter (hCST) are related Golgi membrane proteins with 10 transmembrane helices. We have constructed chimeras between these proteins in order to identify submolecular regions responsible for the determination of substrate specificity. To assess the UGT and CST activities, chimeric cDNAs were transiently expressed in either UGT-deficient mutant Lec8 cells or CST-deficient mutant Lec2 cells, and the binding of plant lectins, GS-II or PNA, respectively, to these cells was examined. During the course of analysis of various chimeric transporters, we found that chimeras whose submolecular regions contained helices 1, 8, 9, and 10, and helices 2, 3, and 7 derived from hUGT1 and hCST sequences, respectively, exhibited both UGT and CST activities. The dual substrate specificity for UDP-galactose and CMP-sialic acid of one such representative chimera was directly confirmed by in vitro measurement of the nucleotide sugar transport activity using a heterologous expression system in the yeastSaccharomyces cerevisiae. These findings indicated that the regions which are critical for determining the substrate specificity of UGT and CST resided in different submolecular sites in the two transporters, and that these different determinants could be present within one protein without interfering with each other's function.
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- 2001
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44. アジア ノ ケイザイ セイチョウ ト コウクウ ユソウ ジュヨウ コウゾウ
- Author
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Nobuhiro, Ishida
- Published
- 2001
45. Schizosaccharomyces pombe UDP-galactose transporter: identification of its functional form through cDNA cloning and expression in mammalian cells
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Hiroaki Segawa, Nobuhiro Ishida, Masao Kawakita, and Kaoru Takegawa
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DNA, Complementary ,Monosaccharide Transport Proteins ,Genes, Fungal ,Molecular Sequence Data ,Biophysics ,Biochemistry ,Fungal Proteins ,Exon ,Structural Biology ,Complementary DNA ,Schizosaccharomyces ,Genetics ,Animals ,Humans ,Amino Acid Sequence ,Cloning, Molecular ,Molecular Biology ,Gene ,Galactomannan synthesis (gms) gene ,Base Sequence ,biology ,Griffonia simplicifolia lectin II ,Intron ,Transporter ,Cell Biology ,biology.organism_classification ,Lec8 cell ,UDP-galactose transporter ,Reverse transcription polymerase chain reaction ,Schizosaccharomyces pombe - Abstract
The Schizosaccharomyces pombe UDP-galactose transporter cDNA (SpUGT cDNA), encoding the product of the gms1+ gene which consists of two exon sequences separated by a 173-bp intron, was cloned by RT-PCR. Its product, a hydrophobic protein of 353 amino acid residues resembling its human counterpart, was expressed in the Golgi membranes of UDP-galactose transporter-deficient Lec8 cells, and complemented the genetic defect of the mutant cells. This indicated that SpUGT cDNA encodes the functional S. pombe UDP-galactose transporter. The product of an ORF found in the second exon, which was previously assumed to be the S. pombe UDP-galactose transporter, thus represents an inactive, truncated form of the SpUGT protein.
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- 1999
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46. [Untitled]
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Nobuhiro ISHIDA and Toru ONISHI
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- 2008
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47. Coexpression of 1,2 galactosyltransferase and UDP-galactose transporter efficiently galactosylates N- and O-glycans in Saccharomyces cerevisiae
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Makoto Takeuchi, Shigemi Yoshioka, Nobuhiro Ishida, Mami Kainuma, Takehiko Yoko-o, Yoshifumi Jigami, and Masao Kawakita
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Glycan ,Glycosylation ,Monosaccharide Transport Proteins ,Saccharomyces cerevisiae ,Heterologous ,Biochemistry ,Substrate Specificity ,Uridine Diphosphate Galactose ,chemistry.chemical_compound ,Polysaccharides ,Schizosaccharomyces ,Humans ,chemistry.chemical_classification ,Galactosyltransferase ,biology ,Galactose ,Biological Transport ,Transporter ,Galactosyltransferases ,biology.organism_classification ,Recombinant Proteins ,carbohydrates (lipids) ,Enzyme ,chemistry ,Schizosaccharomyces pombe ,biology.protein ,Schizosaccharomyces pombe Proteins - Abstract
We have studied in vivo neo-galactosylation in Saccharomyces cerevisiae and analyzed the critical factors involved in this system. Two heterologous genes, gma12(+) encoding alpha1, 2-galactosyltransferase (alpha1,2 GalT) from Schizosaccharomyces pombe and UGT2 encoding UDP-galactose (UDP-Gal) transporter from human, were functionally expressed to examine the intracellular conditions required for galactosylation. Detection by fluorescence labeled alpha-galactose specific lectin revealed that 50% of the cells incorporated galactose to cell surface mannoproteins only when the gma12(+) and hUGT2 genes were coexpressed in galactose media. Integration of both genes in the Delta mnn1 background cells increased galactosylation to 80% of the cells. Correlation between cell surface galactosylation and UDP-galactose transport activity indicated that an exogenous supply of UDP-Gal transporter rather than alpha1,2 GalT played a key role for efficient galactosylation in S.cerevisiae. In addition, this heterologous system enabled us to study the in vivo function of S. pombe alpha1,2 GalT to prove that it transfers galactose to both N - and O -linked oligosaccharides. Structural analysis indicated that this enzyme transfers galactose to O -mannosyl residue attached to polypeptides and produces Galalpha1,2-Man1-O-Ser/Thr structure. Thus, we have successfully generated a system for efficient galactose incorporation which is originally absent in S. cerevisiae, suggesting further possibilities for in vivo glycan remodeling toward therapeutically useful galactose containing heterologous proteins in S. cerevisiae.
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- 1999
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48. Functional Expression of Human Golgi CMP-Sialic Acid Transporter in the Golgi Complex of a Transporter-Deficient Chinese Hamster Ovary Cell Mutant
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Nobuhiro Ishida, Shigemi Yoshioka, Masao Kawakita, Miyuki Ito, and Ge-Hong Sun-Wada
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DNA, Complementary ,Wheat Germ Agglutinins ,Genetic Vectors ,Golgi Apparatus ,CHO Cells ,Biology ,Biochemistry ,symbols.namesake ,Cricetulus ,Cricetinae ,Complementary DNA ,Animals ,Humans ,Molecular Biology ,Peptide sequence ,DNA Primers ,Golgi membrane ,Base Sequence ,Chinese hamster ovary cell ,Membrane Proteins ,Transporter ,General Medicine ,Golgi apparatus ,Subcellular localization ,Molecular biology ,Transport protein ,carbohydrates (lipids) ,Microscopy, Fluorescence ,Mutation ,Nucleotide Transport Proteins ,symbols ,Carrier Proteins ,Subcellular Fractions - Abstract
We recently described the cloning of putative human CMP-sialic acid transporter (hCST) cDNA [Ishida, N. et al. (1996) J. Biochem. 120, 1074-1078]. The hCST cDNA coded for a hydrophobic protein with an amino acid sequence showing a high degree of similarity (92% identity) to that of murine CMP-sialic acid transporter. In this report, we demonstrate that hCST corrects the CMP-sialic acid transporter-deficient phenotype of CHO-derived Lec2 cells, as judged from the recovery of WGA-sensitivity by transformants, and the recovery of CMP-sialic acid transporting ability by microsomal vesicles prepared from them. A peptide antibody against the C-terminus of the hCST protein detected the cDNA products expressed in the microsomes of the transformants. The subcellular localization of the hCST protein in the Golgi membrane was demonstrated by immunofluorescence microscopy, using the hCST-specific antibody. These results clearly indicate that hCST cDNA encodes the human CMP-sialic acid transporter protein. Plasma membrane-selective permeabilization combined with immunofluorescence microscopy provided strong evidence that the C-terminus of the human CMP-Sia transporter is exposed to the cytosol on the outer surface of the Golgi membrane.
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- 1998
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49. Nucleotide Sugar Transporters: Elucidation of Their Molecular Identity and Its Implication for Future Studies
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Shigemi Yoshioka, Nobuhiko Miura, Ge-Hong Sun-Wada, Nobuhiro Ishida, and Masao Kawakita
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DNA, Complementary ,Monosaccharide Transport Proteins ,Glycoconjugate ,Molecular Sequence Data ,Nucleotide sugar ,Biochemistry ,symbols.namesake ,chemistry.chemical_compound ,Glycosyltransferase ,Animals ,Humans ,Nucleotide ,Amino Acid Sequence ,Cloning, Molecular ,Molecular Biology ,Peptide sequence ,chemistry.chemical_classification ,biology ,Nucleotides ,Biological Transport ,General Medicine ,Golgi apparatus ,Amino acid ,Transmembrane domain ,chemistry ,symbols ,biology.protein - Abstract
Nucleotide sugar transporters are mainly located in the Golgi membranes and carry nucleotide sugars, that are produced outside the Golgi apparatus, into the organelle, where they serve as substrates for the elongation of carbohydrate chains by glycosyltransferases. They are thus indispensable for cellular glycoconjugate synthesis and, moreover, may have regulatory roles in producing the structural variety of cellular glycoconjugates. Their occurrence has long been well recognized, but studies on the molecular bases of their strict substrate specificities and modes of action have been hampered by the lack of information on their precise molecular structures. Complementary DNAs encoding several of these transporters were cloned recently, which represented a substantial step forward as to the above mentioned issues. The products of these cDNAs are mutually related hydrophobic proteins consisting of 320-400 amino acid residues with multiple putative transmembrane helix domains, and are located in the Golgi apparatus. This review briefly summarizes the present status of the field of nucleotide sugar transporter research, and also presents an outlook of the study in this field.
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- 1998
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50. Functional Expression of the Human UDP-Galactose Transporters in the Yeast Saccharomyces cerevisiae
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Shigemi Yoshioka, Ge-Hong Sun-Wada, Nobuhiro Ishida, and Masao Kawakita
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Monosaccharide Transport Proteins ,Genetic Vectors ,Immunoblotting ,Saccharomyces cerevisiae ,Biochemistry ,Uridine Diphosphate Galactose ,symbols.namesake ,Humans ,Molecular Biology ,Glyceraldehyde 3-phosphate dehydrogenase ,chemistry.chemical_classification ,biology ,Membrane transport protein ,Vesicle ,Biological Transport ,General Medicine ,Golgi apparatus ,biology.organism_classification ,Yeast ,Amino acid ,Kinetics ,chemistry ,biology.protein ,symbols ,Heterologous expression ,Subcellular Fractions - Abstract
We describe the functional expression of the putative human Golgi UDP-galactose transporters (hUGT1 and hUGT2) in the yeast Saccharomyces cerevisiae. Both hUGT1 and hUGT2 were expressed under the control of the yeast constitutive GAPDH promoter. The expression level of hUGT1 seemed to be considerably lower than that of hUGT2, although hUGT1 has an amino acid sequence identical to that of hUGT2 except for 5 amino acid residues at the C-terminus. The hUGT product was expressed in the membranes of Golgi and other organellar compartments. The membrane vesicles prepared from the hUGT1- or the hUGT2-expressing yeast cells exhibited UDP-galactose specific transport activity. The apparent Km values of the yeast-expressed hUGT1 and hUGT2 for UDP-galactose were 1.2 and 2 microM, respectively, which were comparable with the Km obtained with mammalian Golgi vesicles. Transport was dependent on temperature and integrity of vesicles, and was inhibited by UMP, as observed with mammalian Golgi vesicles. Our results demonstrate that the previously described hUGT1 and hUGT2 encode the UDP-galactose transporters, rather than regulatory proteins. The development of a convenient yeast expression system should facilitate analysis of the structure-function relationships of the UDP-galactose transporters.
- Published
- 1998
- Full Text
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