1. Raw data of the structure and dynamics of CRT1 homology models
- Author
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Amy Clarke, Thomas Stockner, Sonja Sucic, Michael Freissmuth, Clemens V. Farr, Ali El-Kasaby, Daniel Szöllősi, Thomas Stockner, Amy Clarke, Clemens V. Farr, Ali El-Kasaby, Michael Freissmuth, Sonja Sucic, and Daniel Szöllősi
- Subjects
molecular dynamics simulations ,creatine transporter, protonation, cysteine 144 - Abstract
In chordates, energy buffering is achieved in part through phosphocreatine, which requires cellular uptake of creatine by the membrane-embedded creatine transporter (CRT1/SLC6A8). Mutations in human slc6a8 lead to creatine transporter deficiency syndrome, for which there is only limited treatment. Here we used a combined homology modeling, molecular dynamics, and experimental approach to generate a structural model of CRT1. Our observations support the following conclusions: contrary to previous proposals, C144, a key residue in the substrate binding site, is not present in a charged state. Similarly, the side chain D458 must be present in a protonated form to maintain the structural integrity of CRT1. Finally, we identified that the interaction chain Y148-creatine-Na+ is essential to the process of occlusion, which occurs via a ‘hold-and-pull’ mechanism. The model should be useful to study the impact of disease-associated point mutations on the folding of CRT1 and identify approaches which correct folding-deficient mutants.
- Published
- 2023
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