284 results on '"Kevin Talbot"'
Search Results
2. Profiling non-coding RNA expression in cerebrospinal fluid of amyotrophic lateral sclerosis patients
- Author
-
Greig Joilin, Elizabeth Gray, Alexander G. Thompson, Kevin Talbot, P. Nigel Leigh, Sarah F. Newbury, Martin R. Turner, and Majid Hafezparast
- Subjects
Cohort Studies ,MicroRNAs ,Amyotrophic Lateral Sclerosis ,Humans ,Neurodegenerative Diseases ,General Medicine ,Biomarkers - Abstract
Objective biomarkers for the fatal neurodegenerative disease amyotrophic lateral sclerosis or motor neuron disease (ALS/MND) are critical for diagnosis, drug development, clinical trials, and insight into disease pathology. Key candidates for biomarkers present in biofluids include non-coding RNA (ncRNA) transcripts including microRNA, piwi-interacting RNA and transfer RNA. To determine if the central nervous system was the source of the dysregulated ncRNA biomarkers we previously observed in serum, we sought to identify dysregulated ncRNA candidates in cerebrospinal fluid (CSF) which may provide new insight into the disease pathology.Small RNA sequencing (RNA-seq) was undertaken on CSF samples from healthy controls (We found a range of ncRNA that were dysregulated in the RNA-seq screen, but these failed to be validated or detected in some cases using reverse transcription-quantitative polymerase chain reaction (RT-qPCR). Additionally, our previously identified serum ncRNA biomarker showed no change in CSF or correlation to serum.This study suggests the CSF may not be the source of dysregulated ncRNA in the serum and highlights the difficulty in identifying ncRNA in CSF as biomarkers for ALS.KEY MESSAGESIn this current study, we investigated the expression of non-coding RNA transcripts in the cerebrospinal fluid of ALS patients compared to healthy controls.RNA-seq identified dysregulated non-coding RNA transcripts, but these were not validated with RT-qPCR.We conclude that cerebrospinal fluid is not a suitable source of diagnostic biomarkers.
- Published
- 2022
- Full Text
- View/download PDF
3. Advantages of routine next‐generation sequencing over standard genetic testing in the amyotrophic lateral sclerosis clinic
- Author
-
Jakub Scaber, Alexander G. Thompson, Lucy Farrimond, Emily Feneberg, Malcolm Proudfoot, Lynn Ossher, Martin R. Turner, and Kevin Talbot
- Subjects
Neurology ,Neurology (clinical) - Published
- 2023
- Full Text
- View/download PDF
4. Limited value of serum neurofilament light chain in diagnosing amyotrophic lateral sclerosis
- Author
-
Jennifer C Davies, Thanuja Dharmadasa, Alexander G Thompson, Evan C Edmond, Katie Yoganathan, Jiali Gao, Kevin Talbot, and Martin R Turner
- Subjects
Cellular and Molecular Neuroscience ,Psychiatry and Mental health ,Neurology ,Biological Psychiatry - Abstract
A biomarker specific for the diagnosis of amyotrophic lateral sclerosis must be sensitive across a spectrum of clinical heterogeneity. Neurofilament light chain levels in amyotrophic lateral sclerosis correlate with the rate of disability progression. Previous attempts to establish a diagnostic role for neurofilament light chain have been limited to comparison with healthy individuals or controls with alternative diagnoses unlikely to be confused with amyotrophic lateral sclerosis in real-world clinical practice. In a tertiary amyotrophic lateral sclerosis referral clinic, first visit serum was taken for neurofilament light chain measurement after prospectively recording the clinical diagnosis as: ‘amyotrophic lateral sclerosis’, ‘primary lateral sclerosis’, ‘alternative’ or ‘currently uncertain’. Of 133 referrals, 93 patients were diagnosed with amyotrophic lateral sclerosis (median neurofilament light chain 218.1 pg/ml, interquartile range 130.7-311.9), 3 primary lateral sclerosis (65.6, 51.5-106.9) and 19 alternative diagnoses (45.2, 13.5-71.9) at first visit. Of 18 initially uncertain diagnoses, 8 were subsequently diagnosed with amyotrophic lateral sclerosis (98.5, 45.3-300.1). Neurofilament light chain ≥110.9 pg/ml had a positive predictive value of 0.92 for amyotrophic lateral sclerosis; In a specialised clinic, neurofilament light chain is largely confirmatory to clinical judgement in diagnosing amyotrophic lateral sclerosis and has limited ability to exclude alternative diagnoses. The current, important, value of neurofilament light chain is its potential to stratify patients with amyotrophic lateral sclerosis by disease activity and as a biomarker in therapeutic trials.
- Published
- 2023
- Full Text
- View/download PDF
5. Creatine kinase and prognosis in amyotrophic lateral sclerosis: a literature review and multi-centre cohort analysis
- Author
-
Jiali Gao, Thanuja Dharmadasa, Andrea Malaspina, Pamela J. Shaw, Kevin Talbot, Martin R. Turner, and Alexander G. Thompson
- Subjects
Neurology ,Neurology (clinical) - Abstract
Background Amyotrophic lateral sclerosis (ALS) is a prognostically heterogeneous neurodegenerative disease. Blood creatine kinase (CK) level has been inconsistently reported as a prognostic biomarker and raised levels in some ALS patients have been presumed to reflect muscle wasting, which is also variable. Methods MEDLINE was systematically searched for papers related to CK in ALS and the relevant studies were reviewed. Using data from 222 ALS patients in a multi-centre, prospective, longitudinal cohort, survival analyses using Kaplan–Meier and Cox proportional hazards models were undertaken in relation to CK and other prognostic factors. Results Twenty-five studies investigating CK in ALS were identified, of which 10 specifically studied the link between CK and survival. Five studies observed no association, four found that higher CK levels were associated with longer survival and one, the opposite. In our cohort (n = 222), 39% of patients had a CK level above the laboratory reference range. Levels were higher in males compared to females (p p p p = 0.003), there was no significant association after adjusting for other prognostic covariates. Conclusion While raised CK levels in ALS do reflect lower motor neuron denervation to a large extent, they are not independently associated with survival when measured in the symptomatic phase of the disease.
- Published
- 2022
- Full Text
- View/download PDF
6. Poly(ADP-ribose) promotes toxicity of
- Author
-
Junli, Gao, Quinlan T, Mewborne, Amandeep, Girdhar, Udit, Sheth, Alyssa N, Coyne, Ritika, Punathil, Bong Gu, Kang, Morgan, Dasovich, Austin, Veire, Mariely, DeJesus Hernandez, Shuaichen, Liu, Zheng, Shi, Ruxandra, Dafinca, Elise, Fouquerel, Kevin, Talbot, Tae-In, Kam, Yong-Jie, Zhang, Dennis, Dickson, Leonard, Petrucelli, Marka, van Blitterswijk, Lin, Guo, Ted M, Dawson, Valina L, Dawson, Anthony K L, Leung, Thomas E, Lloyd, Tania F, Gendron, Jeffrey D, Rothstein, and Ke, Zhang
- Subjects
DNA-Binding Proteins ,Poly Adenosine Diphosphate Ribose ,C9orf72 Protein ,Frontotemporal Dementia ,Humans ,Dipeptides ,Arginine - Abstract
Arginine-rich dipeptide repeat proteins (R-DPRs), abnormal translational products of a GGGGCC hexanucleotide repeat expansion in
- Published
- 2022
7. Poly(ADP-ribose) promotes toxicity of C9ORF72 arginine-rich dipeptide repeat proteins
- Author
-
Junli Gao, Quinlan T. Mewborne, Amandeep Girdhar, Udit Sheth, Alyssa N. Coyne, Ritika Punathil, Bong Gu Kang, Morgan Dasovich, Austin Veire, Mariely DeJesus Hernandez, Shuaichen Liu, Zheng Shi, Ruxandra Dafinca, Elise Fouquerel, Kevin Talbot, Tae-In Kam, Yong-Jie Zhang, Dennis Dickson, Leonard Petrucelli, Marka van Blitterswijk, Lin Guo, Ted M. Dawson, Valina L. Dawson, Anthony K. L. Leung, Thomas E. Lloyd, Tania F. Gendron, Jeffrey D. Rothstein, and Ke Zhang
- Subjects
General Medicine - Abstract
Arginine-rich dipeptide repeat proteins (R-DPRs), abnormal translational products of a GGGGCC hexanucleotide repeat expansion in C9ORF72 , play a critical role in C9ORF72 -related amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD), the most common genetic form of the disorders (c9ALS/FTD). R-DPRs form liquid condensates in vitro, induce stress granule formation in cultured cells, aggregate, and sometimes coaggregate with TDP-43 in postmortem tissue from patients with c9ALS/FTD. However, how these processes are regulated is unclear. Here, we show that loss of poly(ADP-ribose) (PAR) suppresses neurodegeneration in c9ALS/FTD fly models and neurons differentiated from patient-derived induced pluripotent stem cells. Mechanistically, PAR induces R-DPR condensation and promotes R-DPR–induced stress granule formation and TDP-43 aggregation. Moreover, PAR associates with insoluble R-DPR and TDP-43 in postmortem tissue from patients. These findings identified PAR as a promoter of R-DPR toxicity and thus a potential target for treating c9ALS/FTD.
- Published
- 2022
- Full Text
- View/download PDF
8. Measuring disability in amyotrophic lateral sclerosis/motor neuron disease: the WHODAS 2.0-36, WHODAS 2.0-32, and WHODAS 2.0-12
- Author
-
Carolyn A, Young, John, Ealing, Christopher J, McDermott, Tim L, Williams, Ammar, Al-Chalabi, Tahir, Majeed, Kevin, Talbot, Timothy, Harrower, Christina, Faull, Andrea, Malaspina, Joe, Annadale, Roger J, Mills, and Alan, Tennant
- Subjects
Neurology ,Neurology (clinical) - Published
- 2022
9. Human iPSC co-culture model to investigate the interaction between microglia and motor neurons
- Author
-
Björn F. Vahsen, Elizabeth Gray, Ana Candalija, Kaitlyn M. L. Cramb, Jakub Scaber, Ruxandra Dafinca, Antigoni Katsikoudi, Yinyan Xu, Lucy Farrimond, Richard Wade-Martins, William S. James, Martin R. Turner, Sally A. Cowley, and Kevin Talbot
- Subjects
Motor Neurons ,Multidisciplinary ,Amyotrophic Lateral Sclerosis ,Induced Pluripotent Stem Cells ,Humans ,Microglia ,Coculture Techniques - Abstract
Motor neuron diseases such as amyotrophic lateral sclerosis are primarily characterized by motor neuron degeneration with additional involvement of non-neuronal cells, in particular, microglia. In previous work, we have established protocols for the differentiation of iPSC-derived spinal motor neurons and microglia. Here, we combine both cell lineages and establish a novel co-culture of iPSC-derived spinal motor neurons and microglia, which is compatible with motor neuron identity and function. Co-cultured microglia express key identity markers and transcriptomically resemble primary human microglia, have highly dynamic ramifications, are phagocytically competent, release relevant cytokines and respond to stimulation. Further, they express key amyotrophic lateral sclerosis-associated genes and release disease-relevant biomarkers. This novel and authentic human model system facilitates the study of physiological motor neuron-microglia crosstalk and will allow the investigation of non-cell-autonomous phenotypes in motor neuron diseases such as amyotrophic lateral sclerosis.
- Published
- 2022
- Full Text
- View/download PDF
10. Pathological laughter and crying in neurological disorders: recognition and treatment
- Author
-
Emma Husbands and Kevin Talbot
- Subjects
Laughter ,Humans ,Neurology (clinical) ,General Medicine ,Crying ,Nervous System Diseases ,Quinidine - Abstract
Pathological laughter and crying is a disabling symptom complex associated with damage to various central nervous system pathways that control the reflex motor component of emotional expression. Many underlying conditions—including neurodegenerative diseases, CNS inflammation, vascular lesions and traumatic brain injury—can be associated with disinhibition of emotional reflex control. This suggests a disruption of anatomical and functional networks, rather than any specific unifying pathological process. There is a wide differential diagnosis, including depression, dementia and other forms of behavioural disturbance. Diagnostic criteria and rating scales can help with clinical assessments and facilitate clinical trials. There is now good-quality evidence for a combination of dextromethorphan and quinidine, with weaker evidence for tricyclic and selective serotonin reuptake inhibitor antidepressants. Pathological laughter and crying is disabling and underdiagnosed but potentially treatable, and its wider recognition is important.
- Published
- 2022
11. Hyperexcitability in young iPSC-derived C9ORF72 mutant motor neurons is associated with increased intracellular calcium release
- Author
-
Sarah Burley, Dayne A. Beccano-Kelly, Kevin Talbot, Oscar Cordero Llana, Richard Wade-Martins, and University of St Andrews. School of Biology
- Subjects
Motor Neurons ,QP Physiology ,DNA Repeat Expansion ,Multidisciplinary ,C9orf72 Protein ,Amyotrophic Lateral Sclerosis ,Induced Pluripotent Stem Cells ,QH426 Genetics ,3rd-DAS ,Amyotrophic lateral sclerosis ,QP ,Induced pluripotent stem cells ,RC0321 ,Humans ,Calcium ,Patch clamp ,RC0321 Neuroscience. Biological psychiatry. Neuropsychiatry ,QH426 - Abstract
A large hexanucleotide repeat expansion in the C9ORF72 gene is the most prevalent cause of amyotrophic lateral sclerosis (ALS). To better understand neuronal dysfunction during ALS progression, we studied motor neuron (MN) cultures derived from iPSC lines generated from C9ORF72 (C9) expansion carriers and unaffected controls. C9 and control MN cultures showed comparable mRNA levels for MN markers SMI-32, HB9 and ISL1 and similar MN yields (> 50% TUJ1/SMI-32 double-positive MNs). Using whole-cell patch clamp we showed that C9-MNs have normal membrane capacitance, resistance and resting potential. However, immature (day 40) C9-MNs exhibited a hyperexcitable phenotype concurrent with increased release of calcium (Ca2+) from internal stores, but with no changes to NaV and KV currents. Interestingly, this was a transient phenotype. By day 47, maturing C9-MNs demonstrated normal electrophysiological activity, displaying only subtle alterations on mitochondrial Ca2+ release. Together, these findings suggest the potential importance of a developmental component to C9ORF72-related ALS.
- Published
- 2022
- Full Text
- View/download PDF
12. Stress granule assembly in vivo is deficient in the CNS of mutant TDP-43 ALS mice
- Author
-
Alicia Dubinski, Myriam Gagné, Sarah Peyrard, David Gordon, Kevin Talbot, and Christine Vande Velde
- Subjects
Genetics ,General Medicine ,Molecular Biology ,Genetics (clinical) - Abstract
Responding effectively to external stress is crucial for neurons. Defective stress granule dynamics has been hypothesized as one of the pathways that renders motor neurons in amyotrophic lateral sclerosis (ALS) more prone to early death. Specifically, it is thought that stress granules seed the cytoplasmic TDP-43 inclusions that are observed in the neurons of most ALS patients, as well as ~50% of all frontotemporal dementia (FTD) patients. In this study, we tested this hypothesis in an intact mammalian nervous system. We established an in vivo heat stress paradigm in mice that effectively triggers the eIF2α pathway and the formation of stress granules in the CNS. In non-transgenic mice, we report an age-dependent decline in the formation of heat-induced stress granules, with 18-month-old animals showing a significant impairment. Furthermore, although neuronal stress granules were robustly observed in non-transgenic mice and SOD1G93A mice, they were largely absent in age-matched TDP-43M337V animals. The observed defect in stress granule formation in TDP-43M337V mice correlated with deficits in expression of key protein components typically required for phase separation. Lastly, while TDP-43 was not localized to stress granules, we observed complete nuclear depletion of TDP-43 in a subset of neurons, with the highest proportion being in the TDP-43M337V mice. Overall, our results indicate that mutant TDP-43 expression is associated with defective stress granule assembly and increased TDP-43 nuclear depletion in the mammalian nervous system, which could be relevant to ALS/FTD pathogenesis.
- Published
- 2022
13. Targeting phosphoglycerate kinase 1 with terazosin improves motor neuron phenotypes in multiple models of amyotrophic lateral sclerosis
- Author
-
Helena Chaytow, Emily Carroll, David Gordon, Yu-Ting Huang, Dinja van der Hoorn, Hannah Louise Smith, Thomas Becker, Catherina Gwynne Becker, Kiterie Maud Edwige Faller, Kevin Talbot, and Thomas Henry Gillingwater
- Subjects
DNA-Binding Proteins ,Motor Neurons ,Mice ,Phosphoglycerate Kinase ,Phenotype ,Amyotrophic Lateral Sclerosis ,Animals ,Humans ,General Medicine ,Prazosin ,General Biochemistry, Genetics and Molecular Biology ,Zebrafish - Abstract
BackgroundAmyotrophic lateral sclerosis (ALS) is a fatal neurodegenerative disorder with heterogeneous aetiology and a complex genetic background. Effective therapies are therefore likely to act on convergent pathways such as dysregulated energy metabolism, linked to multiple neurodegenerative diseases including ALS.MethodsActivity of the glycolysis enzyme phosphoglycerate kinase 1 (PGK1) was increased genetically or pharmacologically using terazosin in zebrafish, mouse and ESC-derived motor neuron models of ALS. Multiple disease phenotypes were assessed to determine the therapeutic potential of this approach, including axon growth and motor behaviour, survival and cell death following oxidative stress.FindingsWe have found that targeting a single bioenergetic protein, PGK1, modulates motor neuron vulnerability in vivo. In zebrafish models of ALS, overexpression of PGK1 rescued motor axon phenotypes and improved motor behaviour. Treatment with terazosin, an FDA-approved compound with a known non-canonical action of increasing PGK1 activity, also improved these phenotypes. Terazosin treatment extended survival, improved motor phenotypes and increased motor neuron number in Thy1-hTDP-43 mice. In ESC-derived motor neurons expressing TDP-43M337V, terazosin protected against oxidative stress-induced cell death and increased basal glycolysis rates, while rescuing stress granule assembly.InterpretationOur data demonstrate that terazosin protects motor neurons via multiple pathways, including upregulating glycolysis and rescuing stress granule formation. Repurposing terazosin therefore has the potential to increase the limited therapeutic options across all forms of ALS, irrespective of disease cause.
- Published
- 2022
- Full Text
- View/download PDF
14. Truncated stathmin-2 is a marker of TDP-43 pathology in frontotemporal dementia
- Author
-
Prasanth Sivakumar, Jack Humphrey, Keith A. Josephs, Mercedes Prudencio, E. Aubrey Thompson, Kevin Talbot, Bjorn Oskarsson, Hemali Phatnani, Leonard Petrucelli, Ana Candalija, David S. Knopman, Pietro Fratta, Casey Cook, Yari Carlomagno, Cristhoper H. Fernandez De Castro, Duyang Kim, Neil Graff-Radford, Maria Secrier, Siddharthan Chandran, Mei Yue, Anna-Leigh Brown, Sarah E. Hill, Bhuvaneish T. Selvaraj, Michael G. Heckman, Cristian Bodo, Karen Jansen-West, Michael E. Ward, Demetra Catalano, Samantha Fennessey, Elizabeth M. C. Fisher, Michael DeTure, Ronald C. Petersen, Dennis W. Dickson, Jia Newcombe, Isabel Hubbard, Delphine Fagegaltier, Tania F. Gendron, Ying-Chih Wang, Karen Burr, Lillian M. Daughrity, Tammaryn Lashley, J. Shi, Yuping Song, Jennifer M. Kachergus, Matthew R. Spiegel, Rosa Rademakers, Marka van Blitterswijk, Shunsuke Koga, Bradley F. Boeve, Sarah R. Pickles, Nadia Propp, and Towfique Raj
- Subjects
Male ,0301 basic medicine ,Pathology ,medicine.medical_specialty ,Induced Pluripotent Stem Cells ,Stathmin ,Disease ,TARDBP ,Progressive supranuclear palsy ,03 medical and health sciences ,0302 clinical medicine ,mental disorders ,Humans ,Medicine ,Dementia ,biology ,business.industry ,nutritional and metabolic diseases ,RNA ,General Medicine ,Human brain ,Middle Aged ,medicine.disease ,Frontal Lobe ,nervous system diseases ,DNA-Binding Proteins ,030104 developmental biology ,medicine.anatomical_structure ,Frontotemporal Dementia ,030220 oncology & carcinogenesis ,Mutation ,Commentary ,biology.protein ,Female ,business ,Biomarkers ,Frontotemporal dementia - Abstract
No treatment for frontotemporal dementia (FTD), the second most common type of early-onset dementia, is available, but therapeutics are being investigated to target the 2 main proteins associated with FTD pathological subtypes: TDP-43 (FTLD-TDP) and tau (FTLD-tau). Testing potential therapies in clinical trials is hampered by our inability to distinguish between patients with FTLD-TDP and FTLD-tau. Therefore, we evaluated truncated stathmin-2 (STMN2) as a proxy of TDP-43 pathology, given the reports that TDP-43 dysfunction causes truncated STMN2 accumulation. Truncated STMN2 accumulated in human induced pluripotent stem cell-derived neurons depleted of TDP-43, but not in those with pathogenic TARDBP mutations in the absence of TDP-43 aggregation or loss of nuclear protein. In RNA-Seq analyses of human brain samples from the NYGC ALS cohort, truncated STMN2 RNA was confined to tissues and disease subtypes marked by TDP-43 inclusions. Last, we validated that truncated STMN2 RNA was elevated in the frontal cortex of a cohort of patients with FTLD-TDP but not in controls or patients with progressive supranuclear palsy, a type of FTLD-tau. Further, in patients with FTLD-TDP, we observed significant associations of truncated STMN2 RNA with phosphorylated TDP-43 levels and an earlier age of disease onset. Overall, our data uncovered truncated STMN2 as a marker for TDP-43 dysfunction in FTD.
- Published
- 2020
- Full Text
- View/download PDF
15. Motor Neuron Disease Register for England, Wales and Northern Ireland—an analysis of incidence in England
- Author
-
Anna Kulka, Lynn Ossher, Neil Pearce, Kevin Talbot, Ammar Al-Chalabi, Andrea Bredin, and Sarah Opie-Martin
- Subjects
Male ,medicine.medical_specialty ,Population ,Northern Ireland ,03 medical and health sciences ,0302 clinical medicine ,Epidemiology ,medicine ,Humans ,education ,education.field_of_study ,Wales ,Incidence ,Incidence (epidemiology) ,Amyotrophic Lateral Sclerosis ,Census ,Missing data ,Confidence interval ,Geography ,England ,Neurology ,Female ,Residence ,Neurology (clinical) ,Catchment area ,030217 neurology & neurosurgery ,Demography - Abstract
Amyotrophic lateral sclerosis (ALS) has a reported incidence of 1-2/100,000 person-years. It is estimated that there are 5000 people with ALS in the UK at any one time; however, the true figure and geographical distribution, are unknown. In this study, we describe the establishment of a population register for England, Wales, and Northern Ireland and report-estimated incidence. Methods: People with a diagnosis of ALS given by a consultant neurologist and whose postcode of residence is within England, Wales, or Northern Ireland were eligible. The catchment area was based on six data contributors that had been participating since 2016. All centres included in this analysis were in England, and therefore Wales and Northern Ireland are not included in this report. Crude age- and sex-specific incidence rates were estimated using population census records for the relevant postcodes from Office of National Statistics census data. These rates were standardized to the UK population structure using direct standardization. Results: There were 232 people in the database with a date of diagnosis between 2017 and 2018, when missing data were imputed there were an estimated 287-301 people. The denominator population of the catchment area is 7,251,845 according to 2011 UK census data. Age- and sex-adjusted incidence for complete cases was 1.61/100,000 person-years (95% confidence interval 1.58, 1.63), and for imputed datasets was 2.072/100,000 person-years (95% CI 2.072, 2.073). Discussion: We found incidence in this previously unreported area of the UK to be similar to other published estimates. As the MND Register for England, Wales, and Northern Ireland grows we will update incidence estimates and report on further analyses.
- Published
- 2020
- Full Text
- View/download PDF
16. CSF chitinases before and after symptom onset in amyotrophic lateral sclerosis
- Author
-
Alexander G. Thompson, Kevin Talbot, Elizabeth Gray, Joanne Wuu, Martin R Turner, Joe Pelt, and Michael Benatar
- Subjects
Adult ,Male ,0301 basic medicine ,medicine.medical_specialty ,SOD1 ,Prodromal Symptoms ,Neurosciences. Biological psychiatry. Neuropsychiatry ,Disease ,Gene mutation ,Gastroenterology ,CHI3L1 ,Pathogenesis ,Prodrome ,03 medical and health sciences ,0302 clinical medicine ,C9orf72 ,Internal medicine ,medicine ,Humans ,Chitinase-3-Like Protein 1 ,Longitudinal Studies ,Amyotrophic lateral sclerosis ,RC346-429 ,Research Articles ,business.industry ,General Neuroscience ,Amyotrophic Lateral Sclerosis ,Chitinases ,Middle Aged ,medicine.disease ,Hexosaminidases ,030104 developmental biology ,Disease Progression ,Female ,Neurology. Diseases of the nervous system ,Neurology (clinical) ,business ,030217 neurology & neurosurgery ,RC321-571 ,Research Article - Abstract
Objective To evaluate the CSF levels of chitinase proteins during the presymptomatic and early symptomatic phases of amyotrophic lateral sclerosis (ALS). Methods CSF samples were obtained from 16 controls, 55 individuals at‐risk for ALS (including 18 carrying a mutation in C9ORF72 , 33 in SOD1 ), 12 ALS patients, and 7 phenoconverters (individuals diagnosed with ALS during follow‐up). At‐risk individuals and phenoconverters were enrolled through the Pre‐fALS study, which includes individuals carrying an ALS‐associated gene mutation without disease manifestations at initial assessment. Longitudinal CSF collections, where possible, took place every 3‐12 months for ALS patients and every 1‐2 years for others. CSF levels of chitotriosidase 1 (CHIT1), chitinase‐3‐like protein 1 (CHI3L1, YKL‐40) and chitinase‐3‐like protein 2 (CHI3L2, YKL‐39) were measured by ELISA, along with CHIT1 activity. Longitudinal changes in at‐risk individuals and phenoconverters were fitted to linear mixed effects models. Results Slowly rising levels of CHIT1 were observed over time in the at‐risk individuals (slope 0.059 log10[CHIT1] per year, P < 0.001). Among phenoconverters, CHIT1 levels and activity rose more sharply (0.403 log10[CHIT1] per year, P = 0.005; 0.260 log10[CHIT1 activity] per year, P = 0.007). Individual levels of both CHI3L1 and CHI3L2 remained relatively stable over time in all participant groups. Interpretation The CHIT1 neuroinflammatory response is a feature of the late presymptomatic to early symptomatic phases of ALS. This study does not suggest a long prodrome of upregulated glial activity in ALS pathogenesis, but strengthens the place of CHIT1 as part of a panel of biomarkers to objectively assess the impact of immune‐modulatory therapeutic interventions in ALS.
- Published
- 2020
- Full Text
- View/download PDF
17. Quantitative patterns of motor cortex proteinopathy across ALS genotypes
- Author
-
Olaf Ansorge, Connor Scott, Daniel Lunn, Martin R Turner, Kilda Carpenter, Matthew Nolan, Sireesha Kaanumalle, Alberto Santamaria-Pang, Kevin Talbot, Dan E. Meyer, Menuka Pallebage Gamarallage, and Elizabeth McDonough
- Subjects
Genotype ,TDP-43 ,C9ORF72 ,Selective vulnerability ,Inhibitory postsynaptic potential ,TARDBP ,lcsh:RC346-429 ,Pathology and Forensic Medicine ,Cellular and Molecular Neuroscience ,C9orf72 ,medicine ,Humans ,Amyotrophic lateral sclerosis ,lcsh:Neurology. Diseases of the nervous system ,biology ,Microglia ,Research ,Amyotrophic Lateral Sclerosis ,Motor Cortex ,FTD ,medicine.disease ,medicine.anatomical_structure ,Spinal Cord ,TDP-43 Proteinopathies ,biology.protein ,Neurology (clinical) ,Primary motor cortex ,ALS ,Neuroscience ,Parvalbumin ,Motor cortex - Abstract
Degeneration of the primary motor cortex is a defining feature of amyotrophic lateral sclerosis (ALS), which is associated with the accumulation of microscopic protein aggregates in neurons and glia. However, little is known about the quantitative burden and pattern of motor cortex proteinopathies across ALS genotypes. We combined quantitative digital image analysis with multi-level generalized linear modelling in an independent cohort of 82 ALS cases to explore the relationship between genotype, total proteinopathy load and cellular vulnerability to aggregate formation. Primary motor cortex phosphorylated (p)TDP-43 burden and microglial activation were more severe in sporadic ALS-TDP disease than C9-ALS. Oligodendroglial pTDP-43 pathology was a defining feature of ALS-TDP in sporadic ALS, C9-ALS and ALS with OPTN, HNRNPA1 or TARDBP mutations. ALS-FUS and ALS-SOD1 showed less cortical proteinopathy in relation to spinal cord pathology than ALS-TDP, where pathology was more evenly spread across the motor cortex-spinal cord axis. Neuronal pTDP-43 aggregates were rare in GAD67+ and Parvalbumin+ inhibitory interneurons, consistent with predominant accumulation in excitatory neurons. Finally, we show that cortical microglia, but not astrocytes, contain pTDP-43. Our findings suggest divergent quantitative, genotype-specific vulnerability of the ALS primary motor cortex to proteinopathies, which may have implications for our understanding of disease pathogenesis and the development of genotype-specific therapies.
- Published
- 2020
- Full Text
- View/download PDF
18. Creatine kinase and prognosis in amyotrophic lateral sclerosis: a literature review and multi-centre cohort analysis
- Author
-
Jiali, Gao, Thanuja, Dharmadasa, Andrea, Malaspina, Pamela J, Shaw, Kevin, Talbot, Martin R, Turner, and Alexander G, Thompson
- Subjects
Cohort Studies ,Male ,Amyotrophic Lateral Sclerosis ,Humans ,Female ,Neurodegenerative Diseases ,Prospective Studies ,Prognosis ,Creatine Kinase - Abstract
Amyotrophic lateral sclerosis (ALS) is a prognostically heterogeneous neurodegenerative disease. Blood creatine kinase (CK) level has been inconsistently reported as a prognostic biomarker and raised levels in some ALS patients have been presumed to reflect muscle wasting, which is also variable.MEDLINE was systematically searched for papers related to CK in ALS and the relevant studies were reviewed. Using data from 222 ALS patients in a multi-centre, prospective, longitudinal cohort, survival analyses using Kaplan-Meier and Cox proportional hazards models were undertaken in relation to CK and other prognostic factors.Twenty-five studies investigating CK in ALS were identified, of which 10 specifically studied the link between CK and survival. Five studies observed no association, four found that higher CK levels were associated with longer survival and one, the opposite. In our cohort (n = 222), 39% of patients had a CK level above the laboratory reference range. Levels were higher in males compared to females (p 0.001), in patients with limb versus bulbar onset of symptoms (p 0.001) and in patients with higher lower motor neuron burden (p 0.001). There was no significant trend in longitudinal CK values. Although a higher standardised log (CK) at first visit was associated with longer survival in univariate analysis (hazard ratio 0.75, p = 0.003), there was no significant association after adjusting for other prognostic covariates.While raised CK levels in ALS do reflect lower motor neuron denervation to a large extent, they are not independently associated with survival when measured in the symptomatic phase of the disease.
- Published
- 2022
19. Multicentre appraisal of amyotrophic lateral sclerosis biofluid biomarkers shows primacy of blood neurofilament light chain
- Author
-
Alexander G. Thompson, Elizabeth Gray, Nick Verber, Yoana Bobeva, Vittoria Lombardi, Stephanie R. Shepheard, Ozlem Yildiz, Emily Feneberg, Lucy Farrimond, Thanuja Dharmadasa, Pamela Gray, Evan C. Edmond, Jakub Scaber, Delia Gagliardi, Janine Kirby, Thomas M. Jenkins, Pietro Fratta, Christopher J. McDermott, Sanjay G. Manohar, Kevin Talbot, Andrea Malaspina, Pamela J. Shaw, and Martin R. Turner
- Subjects
General Engineering - Abstract
The routine clinical integration of individualized objective markers of disease activity in those diagnosed with the neurodegenerative disorder amyotrophic lateral sclerosis is a key requirement for therapeutic development. A large, multicentre, clinic-based, longitudinal cohort was used to systematically appraise the leading candidate biofluid biomarkers in the stratification and potential therapeutic assessment of those with amyotrophic lateral sclerosis. Incident patients diagnosed with amyotrophic lateral sclerosis (n = 258), other neurological diseases (n = 80) and healthy control participants (n = 101), were recruited and followed at intervals of 3–6 months for up to 30 months. Cerebrospinal fluid neurofilament light chain and chitotriosidase 1 and blood neurofilament light chain, creatine kinase, ferritin, complement C3 and C4 and C-reactive protein were measured. Blood neurofilament light chain, creatine kinase, serum ferritin, C3 and cerebrospinal fluid neurofilament light chain and chitotriosidase 1 were all significantly elevated in amyotrophic lateral sclerosis patients. First-visit plasma neurofilament light chain level was additionally strongly associated with survival (hazard ratio for one standard deviation increase in log10 plasma neurofilament light chain 2.99, 95% confidence interval 1.65–5.41, P = 0.016) and rate of disability progression, independent of other prognostic factors. A small increase in level was noted within the first 12 months after reported symptom onset (slope 0.031 log10 units per month, 95% confidence interval 0.012–0.049, P = 0.006). Modelling the inclusion of plasma neurofilament light chain as a therapeutic trial outcome measure demonstrated that a significant reduction in sample size and earlier detection of disease-slowing is possible, compared with using the revised Amyotrophic Lateral Sclerosis Functional Rating Scale. This study provides strong evidence that blood neurofilament light chain levels outperform conventional measures of disease activity at the group level. The application of blood neurofilament light chain has the potential to radically reduce the duration and cost of therapeutic trials. It might also offer a first step towards the goal of more personalized objective disease activity monitoring for those living with amyotrophic lateral sclerosis.
- Published
- 2022
20. Genetic testing in motor neurone disease
- Author
-
Thanuja Dharmadasa, Jakub Scaber, Evan Edmond, Rachael Marsden, Alexander Thompson, Kevin Talbot, and Martin R Turner
- Subjects
DNA Repeat Expansion ,C9orf72 Protein ,Frontotemporal Dementia ,Humans ,Proteins ,Neurology (clinical) ,General Medicine ,Genetic Testing - Abstract
A minority (10%–15%) of cases of amyotrophic lateral sclerosis (ALS), the most common form of motor neurone disease (MND), are currently attributable to pathological variants in a single identifiable gene. With the emergence of new therapies targeting specific genetic subtypes of ALS, there is an increasing role for routine genetic testing for all those with a definite diagnosis. However, potential harm to both affected individuals and particularly to asymptomatic relatives can arise from the indiscriminate use of genetic screening, not least because of uncertainties around incomplete penetrance and variants of unknown significance. The most common hereditary cause of ALS, an intronic hexanucleotide repeat expansion in C9ORF72, may be associated with frontotemporal dementia independently within the same pedigree. The boundary of what constitutes a possible family history of MND has therefore extended to include dementia and associated psychiatric presentations. Notwithstanding the important role of clinical genetics specialists, all neurologists need a basic understanding of the current place of genetic testing in MND, which holds lessons for other neurological disorders.
- Published
- 2021
21. Non-neuronal cells in amyotrophic lateral sclerosis — from pathogenesis to biomarkers
- Author
-
Alexander G. Thompson, Kevin Talbot, Olaf Ansorge, Sally A. Cowley, Björn Friedhelm Vahsen, Elizabeth Gray, Daniel C. Anthony, and Martin R Turner
- Subjects
0301 basic medicine ,Cell ,Neuroprotection ,Pathogenesis ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,0302 clinical medicine ,Immune system ,medicine ,Animals ,Humans ,Amyotrophic lateral sclerosis ,Motor Neurons ,Microglia ,business.industry ,Amyotrophic Lateral Sclerosis ,medicine.disease ,DNA-Binding Proteins ,Crosstalk (biology) ,030104 developmental biology ,medicine.anatomical_structure ,nervous system ,Astrocytes ,Neurology (clinical) ,business ,Neuroscience ,030217 neurology & neurosurgery ,Homeostasis ,Biomarkers - Abstract
The prevailing motor neuron-centric view of amyotrophic lateral sclerosis (ALS) pathogenesis could be an important factor in the failure to identify disease-modifying therapy for this neurodegenerative disorder. Non-neuronal cells have crucial homeostatic functions within the CNS and evidence of involvement of these cells in the pathophysiology of several neurodegenerative disorders, including ALS, is accumulating. Microglia and astrocytes, in crosstalk with peripheral immune cells, can exert both neuroprotective and adverse effects, resulting in a highly nuanced range of neuronal and non-neuronal cell interactions. This Review provides an overview of the diverse roles of non-neuronal cells in relation to the pathogenesis of ALS and the emerging potential of non-neuronal cell biomarkers to advance therapeutic development.
- Published
- 2021
- Full Text
- View/download PDF
22. Atypical TDP-43 protein expression in an ALS pedigree carrying a p.Y374X truncation mutation in TARDBP
- Author
-
Johnathan Cooper‐Knock, Thomas H. Julian, Emily Feneberg, J. Robin Highley, Maurice Sidra, Martin R. Turner, Kevin Talbot, Olaf Ansorge, Scott P. Allen, Tobias Moll, Tatyana Shelkovnikova, Lydia Castelli, Guillaume M. Hautbergue, Christopher Hewitt, Janine Kirby, Stephen B. Wharton, Richard J. Mead, and Pamela J. Shaw
- Subjects
General Neuroscience ,Neurology (clinical) ,Pathology and Forensic Medicine - Abstract
We describe an autosomal dominant, multi-generational, amyotrophic lateral sclerosis (ALS) pedigree in which disease co-segregates with a heterozygous p.Y374X nonsense mutation within TDP-43. Mislocalization of TDP-43 and formation of insoluble TDP-43-positive neuronal cytoplasmic inclusions is the hallmark pathology in95% of ALS patients. Neuropathological examination of the single case for which CNS tissue was available indicated typical TDP-43 pathology within lower motor neurons, but classical TDP-43-positive inclusions were absent from motor cortex. The mutated allele is transcribed and translated in patient fibroblasts and motor cortex tissue, but overall TDP-43 protein expression is reduced compared to wild-type controls. Despite absence of TDP-43-positive inclusions we confirmed deficient TDP-43 splicing function within motor cortex tissue. Furthermore, urea fractionation and mass spectrometry of motor cortex tissue carrying the mutation revealed atypical TDP-43 protein species but not typical C-terminal fragments. We conclude that the p.Y374X mutation underpins a monogenic, fully penetrant form of ALS. Reduced expression of TDP-43 combined with atypical TDP-43 protein species and absent C-terminal fragments extends the molecular phenotypes associated with TDP-43 mutations and with ALS more broadly. Future work will need to include the findings from this pedigree in dissecting the mechanisms of TDP-43-mediated toxicity.
- Published
- 2021
23. Isolated homozygous R217X OPTN mutation causes knock-out of functional C-terminal optineurin domains and associated oligodendrogliopathy-dominant ALS–TDP
- Author
-
Patrick F. Chinnery, Michael J. Keogh, Kevin Talbot, Martin R Turner, Matthew Nolan, Olaf Ansorge, and Paola Barbagallo
- Subjects
Proband ,business.industry ,Spastic dysarthria ,Neuropathology ,Bioinformatics ,medicine.disease ,03 medical and health sciences ,Psychiatry and Mental health ,Dysarthria ,0302 clinical medicine ,medicine ,Surgery ,Neurology (clinical) ,Amyotrophic lateral sclerosis ,medicine.symptom ,business ,030217 neurology & neurosurgery ,Frontotemporal dementia ,Optineurin ,Executive dysfunction - Abstract
Amyotrophic lateral sclerosis (ALS) is a heterogeneous neurodegenerative diseasecaused in a minority of individuals by mutations in more than one classical ALS-associated Mendelian gene, consistent with ‘oligogenic’ inheritance.1 This observation complicates the dissection of precise genotype–phenotype relationships. In the absence of comprehensive genomic analysis (such as whole-exome sequencing) and molecular neuropathology, inferences of genotype–phenotype associations may be misleading, with potentially negative consequences for patient counselling, concepts of pathogenesis, disease modelling and patient selection for genomic therapeutics. Mutations in the autophagic adapter OPTN have been reported as causative of ALS2 and are associated with diverse neuropathology, while also coexisting with other Mendelian ALS gene variants.3 4 To help clarify the role of OPTN variants in the pathogenesis of ALS, and refine genotype–phenotype associations, we provide a comprehensive genomic, neuropathological and biochemical analysis of an individual with a novel, isolated, homozygous R217X (c.649A>T) OPTN mutation and clinically upper motor neuron-dominant form of ALS-TDP with severe oligodendrogliopathy. The proband presented to the Oxford Motor Neuron Disease Clinic and enrolled in the brain donation programme of the Oxford Brain Bank, enabling integration of clinical observations with molecular neuropathological data, including whole exome-sequencing, repeat-primed PCR, OPTN mRNA and protein analyses, and comparison with both healthy brain tissue and that from sporadic (s) ALS-TDP patients. Please refer to online supplemental data for comprehensive methods. ### Supplementary data [jnnp-2020-325803supp001.pdf] ### Clinical vignette A middle-aged man presented with slowly progressive spastic dysarthria associated with an exaggerated jaw jerk and no other abnormal neurological findings. Dysarthria progressed to anarthria over 2 years and neuropsychometry reported mild abnormalities in executive function, but no evidence of language or behavioural abnormalities. Over the following 4 years, weakness with marked increase in tone but without wasting or fasciculations extended to all four limbs. Mild executive dysfunction continued but there was no progression to frontotemporal dementia. Tongue wasting and fasciculations, …
- Published
- 2021
- Full Text
- View/download PDF
24. Higher blood high density lipoprotein and apolipoprotein A1 levels are associated with reduced risk of developing amyotrophic lateral sclerosis
- Author
-
Martin R Turner, Alexander G. Thompson, and Kevin Talbot
- Subjects
Adult ,Male ,medicine.medical_specialty ,Apolipoprotein B ,Lower risk ,Body Mass Index ,Cohort Studies ,chemistry.chemical_compound ,High-density lipoprotein ,Risk Factors ,Diabetes mellitus ,Internal medicine ,medicine ,Humans ,Longitudinal Studies ,Prospective Studies ,Neurodegeneration ,Triglycerides ,Aged ,Apolipoproteins B ,Apolipoprotein A-I ,biology ,Cholesterol ,business.industry ,Amyotrophic Lateral Sclerosis ,Cholesterol, HDL ,cholesterol ,Middle Aged ,medicine.disease ,Psychiatry and Mental health ,Endocrinology ,chemistry ,Cardiovascular Diseases ,Case-Control Studies ,Low-density lipoprotein ,Apolipoprotein B-100 ,biology.protein ,epidemiology ,lipids (amino acids, peptides, and proteins) ,Surgery ,Apolipoprotein A1 ,Neurology (clinical) ,Lipoproteins, HDL ,business ,Risk Reduction Behavior ,Body mass index ,Biomarkers - Abstract
BackgroundPremorbid body mass index, physical activity, diabetes and cardiovascular disease have been associated with an altered risk of developing amyotrophic lateral sclerosis (ALS). There is evidence of shared genetic risk between ALS and lipid metabolism. A very large prospective longitudinal population cohort permits the study of a range of metabolic parameters and the risk of subsequent diagnosis of ALS.MethodsThe risk of subsequent ALS diagnosis in those enrolled prospectively to the UK Biobank (n=502 409) was examined in relation to baseline levels of blood high and low density lipoprotein (HDL, LDL), total cholesterol, total cholesterol:HDL ratio, apolipoproteins A1 and B (apoA1, apoB), triglycerides, glycated haemoglobin A1c (HbA1c) and creatinine, plus self-reported exercise and body mass index.ResultsControlling for age and sex, higher HDL (HR 0.84, 95% CI 0.73 to 0.96, p=0.010) and apoA1 (HR 0.83, 95% CI 0.72 to 0.94, p=0.005) were associated with a reduced risk of ALS. Higher total cholesterol:HDL was associated with an increased risk of ALS (HR 1.17, 95% CI 1.05 to 1.31, p=0.006). In models incorporating multiple metabolic markers, higher LDL or apoB was associated with an increased risk of ALS, in addition to a lower risk with higher HDL or apoA. Coronary artery disease, cerebrovascular disease and increasing age were also associated with an increased risk of ALS.ConclusionsThe association of HDL, apoA1 and LDL levels with risk of ALS contributes to an increasing body of evidence that the premorbid metabolic landscape may play a role in pathogenesis. Understanding the molecular basis for these changes will inform presymptomatic biomarker development and therapeutic targeting.
- Published
- 2021
25. 012 Volumetric and connectivity profile of regional thalamic abnormality in amyotrophic lateral sclerosis
- Author
-
Manoj Saranathan, Ricarda A. L. Menke, Sicong Tu, Fernando Calamante, Marion Sourty, Matthew C. Kiernan, Kevin Talbot, and Martin R Turner
- Subjects
Fibre tracking ,business.industry ,Neurodegeneration ,Thalamus ,Neurosciences. Biological psychiatry. Neuropsychiatry ,Anatomy ,medicine.disease ,White matter ,medicine.anatomical_structure ,medicine ,Multi atlas segmentation ,Abnormality ,Amyotrophic lateral sclerosis ,business ,RC321-571 ,Dynamic functional connectivity - Abstract
Objectives Neurodegeneration in ALS follows a diffuse pattern of cortical involvement.1 We have previously highlighted that thalamic abnormality is a robust disease signature in ALS,2 but the integrity of thalamic nuclei and their clinical association remains unclear. We employed a novel segmentation technique for thalamic nuclei and track-weighted functional connectivity (TW-sFC) to characterize volumetric and connectivity profiles of regional thalamic abnormality. Methods Forty ALS patients and 27 age-and-education matched controls were recruited. All patients underwent comprehensive clinical examination and 3T MRI scan (T1; DWI; rs-fMRI). Thalamic nuclei were robustly segmented from T1 images using the THOMAS pipeline.3 Whole-brain white matter fibre tracking was performed using MRtrix and combined with resting-state fMRI to generate combined structural and functional connectivity maps (TW-sFC).4 Results Reduced thalamus volume was observed bilaterally in ALS compared to control (p values Conclusions Regional thalamic abnormalities are present in ALS and hold a significant association with clinical features. Variability in thalamic connectivity demonstrated significant clinical associations with disease duration, progression rate, and upper motor dysfunction. The findings reinforce that diffusion and functional MR imaging modalities are promising markers of disease burden in ALS. References Brettschneider J, Del Tredici K, Toledo J, et al. Stages of pTDP-43 pathology in amyotrophic lateral sclerosis. Ann Neurol 2013;74:20–38. Tu S, Menke R, Talbot K, Kiernan M, Turner M. Regional thalamic MRI as a marker of widespread cortical pathology and progressive frontotemporal involvement in amyotrophic lateral sclerosis. JNNP 2018;89:1250–1258. Su J, Thomas F, Kaso W, et al. Thalamus optimized multi atlas segmentation (THOMAS): fast, fully automated segmentation of thalamic nuclei from structural MRI. Neuroimage 2019;194:272–282. Calamante F, Smith R, Liang X, Zalesky A, Connelly A. Track-weighted dynamic functional connectivity (TW-dFC): a new method to study time-resolved functional connectivity. Brain Struct Funct 2017;222:3761–3774.
- Published
- 2021
- Full Text
- View/download PDF
26. Modeling seeding and neuroanatomic spread of pathology in amyotrophic lateral sclerosis
- Author
-
Sneha Pandya, Pedro D. Maia, Benjamin Freeze, Ricarda A. L. Menke, Kevin Talbot, Martin R. Turner, and Ashish Raj
- Subjects
Motor Neurons ,Neurology ,Cognitive Neuroscience ,Frontotemporal Dementia ,Amyotrophic Lateral Sclerosis ,Connectome ,Brain ,Humans ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
The neurodegenerative disorder amyotrophic lateral sclerosis (ALS) is characterized by the progressive loss of upper and lower motor neurons, with pathological involvement of cerebral motor and extra-motor areas in a clinicopathological spectrum with frontotemporal dementia (FTD). A key unresolved issue is how the non-random distribution of pathology in ALS reflects differential network vulnerability, including molecular factors such as regional gene expression, or preferential spread of pathology via anatomical connections. A system of histopathological staging of ALS based on the regional burden of TDP-43 pathology observed in postmortem brains has been supported to some extent by analysis of distribution of in vivo structural MRI changes. In this paper, computational modeling using a Network Diffusion Model (NDM) was used to investigate whether a process of focal pathological ‘seeding’ followed by structural network-based spread recapitulated postmortem histopathological staging and, secondly, whether this had any correlation to the pattern of expression of a panel of genes implicated in ALS across the healthy brain. Regionally parcellated T1-weighted MRI data from ALS patients (baseline n=79) was studied in relation to a healthy control structural connectome and a database of associated regional cerebral gene expression. The NDM provided strong support for a structural network-based basis for regional pathological spread in ALS, but no simple relationship to the spatial distribution of ALS-related genes in the healthy brain. Interestingly, OPTN gene was identified as a significant but a weaker non-NDM contributor within the network-gene interaction model (LASSO). Intriguingly, the critical seed regions for spread within the model were not within the primary motor cortex but basal ganglia, thalamus and insula, where NDM recapitulated aspects of the postmortem histopathological staging system. Within the ALS-FTD clinicopathological spectrum, non-primary motor structures may be among the earliest sites of cerebral pathology.
- Published
- 2021
27. A case of SOD1 deficiency: implications for clinical trials
- Author
-
Lucy Farrimond and Kevin Talbot
- Subjects
Oxidative Stress ,Superoxide Dismutase-1 ,nervous system ,animal diseases ,Humans ,nutritional and metabolic diseases ,Neurology (clinical) ,nervous system diseases - Abstract
This scientific commentary refers to ‘Infantile SOD1 deficiency syndrome caused by a homozygous SOD1 variant with absence of enzyme activity’ by Ezer et al. (https://doi.org/10.1093/brain/awab416).
- Published
- 2022
- Full Text
- View/download PDF
28. Neuronal over-expression of Oxr1 is protective against ALS-associated mutant TDP-43 mislocalisation in motor neurons and neuromuscular defects in vivo
- Author
-
Mattéa J. Finelli, Amy Reddington, Matthew Williamson, Kevin Talbot, Peter L. Oliver, Kay E. Davies, David Gordon, and James N. Sleigh
- Subjects
Male ,Genetically modified mouse ,Cytoplasm ,Mutant ,Mutation, Missense ,Neuromuscular Junction ,Mice, Transgenic ,Biology ,Neuromuscular junction ,Mitochondrial Proteins ,Mice ,03 medical and health sciences ,0302 clinical medicine ,mental disorders ,Genetics ,medicine ,Animals ,Humans ,Missense mutation ,Amyotrophic lateral sclerosis ,Molecular Biology ,Genetics (clinical) ,Neuroinflammation ,030304 developmental biology ,Motor Neurons ,0303 health sciences ,Muscles ,Amyotrophic Lateral Sclerosis ,nutritional and metabolic diseases ,General Medicine ,medicine.disease ,Phenotype ,Muscle Denervation ,nervous system diseases ,Cell biology ,DNA-Binding Proteins ,Mice, Inbred C57BL ,Protein Transport ,medicine.anatomical_structure ,Female ,General Article ,030217 neurology & neurosurgery ,Frontotemporal dementia - Abstract
A common pathological hallmark of amyotrophic lateral sclerosis (ALS) and the related neurodegenerative disorder frontotemporal dementia, is the cellular mislocalization of transactive response DNA-binding protein 43 kDa (TDP-43). Additionally, multiple mutations in the TARDBP gene (encoding TDP-43) are associated with familial forms of ALS. While the exact role for TDP-43 in the onset and progression of ALS remains unclear, the identification of factors that can prevent aberrant TDP-43 localization and function could be clinically beneficial. Previously, we discovered that the oxidation resistance 1 (Oxr1) protein could alleviate cellular mislocalization phenotypes associated with TDP-43 mutations, and that over-expression of Oxr1 was able to delay neuromuscular abnormalities in the hSOD1G93A ALS mouse model. Here, to determine whether Oxr1 can protect against TDP-43-associated phenotypes in vitro and in vivo, we used the same genetic approach in a newly described transgenic mouse expressing the human TDP-43 locus harbouring an ALS disease mutation (TDP-43M337V). We show in primary motor neurons from TDP-43M337V mice that genetically-driven Oxr1 over-expression significantly alleviates cytoplasmic mislocalization of mutant TDP-43. We also further quantified newly-identified, late-onset neuromuscular phenotypes of this mutant line, and demonstrate that neuronal Oxr1 over-expression causes a significant reduction in muscle denervation and neuromuscular junction degeneration in homozygous mutants in parallel with improved motor function and a reduction in neuroinflammation. Together these data support the application of Oxr1 as a viable and safe modifier of TDP-43-associated ALS phenotypes.
- Published
- 2019
- Full Text
- View/download PDF
29. Targeting the 5' untranslated region of SMN2 as a therapeutic strategy for spinal muscular atrophy
- Author
-
Suzan M. Hammond, Audrey M. Winkelsas, Katarzyna Chwalenia, George G. Harmison, Carlo Rinaldi, Christopher Grunseich, Kenneth H. Fischbeck, Matthew J.A. Wood, Melissa Bowerman, Sukrat Arya, Kory R. Johnson, and Kevin Talbot
- Subjects
0301 basic medicine ,Untranslated region ,Five prime untranslated region ,Translational efficiency ,SMN1 ,Biology ,5′ UTR ,03 medical and health sciences ,Exon ,0302 clinical medicine ,RC925 ,Drug Discovery ,medicine ,spinal muscular atrophy ,Messenger RNA ,lcsh:RM1-950 ,Spinal muscular atrophy ,medicine.disease ,SMA ,R1 ,nervous system diseases ,lcsh:Therapeutics. Pharmacology ,030104 developmental biology ,030220 oncology & carcinogenesis ,Cancer research ,Molecular Medicine ,Original Article ,antisense oligonucleotides ,SMN2 - Abstract
Spinal muscular atrophy (SMA) is a neuromuscular disorder caused by mutations in the survival motor neuron 1 (SMN1) gene. All patients have at least one copy of a paralog, SMN2, but a C-to-T transition in this gene results in exon 7 skipping in a majority of transcripts. Approved treatment for SMA involves promoting exon 7 inclusion in the SMN2 transcript or increasing the amount of full-length SMN by gene replacement with a viral vector. Increasing the pool of SMN2 transcripts and increasing their translational efficiency can be used to enhance splice correction. We sought to determine whether the 5′ untranslated region (5′ UTR) of SMN2 contains a repressive feature that can be targeted to increase SMN levels. We found that antisense oligonucleotides (ASOs) complementary to the 5′ end of SMN2 increase SMN mRNA and protein levels and that this effect is due to inhibition of SMN2 mRNA decay. Moreover, use of the 5′ UTR ASO in combination with a splice-switching oligonucleotide (SSO) increases SMN levels above those attained with the SSO alone. Our results add to the current understanding of SMN regulation and point toward a new therapeutic target for SMA., Graphical Abstract, Spinal muscular atrophy (SMA) is caused by SMN protein deficiency. Winkelsas et al. show that antisense oligonucleotides complementary to the 5′ end of SMN transcripts increase SMN protein levels by stabilizing SMN mRNA. In cells, this strategy can be used in combination with splice-switching oligonucleotides (i.e., nusinersen) for SMA treatment.
- Published
- 2021
30. Detection and quantification of novel C-terminal TDP-43 fragments in ALS-TDP
- Author
-
Kevin Talbot, Elizabeth Gray, Roman Fischer, Mattéa J. Finelli, Philip D. Charles, Olaf Ansorge, Martin R Turner, Benedikt M. Kessler, Emily Feneberg, and Connor Scott
- Subjects
0301 basic medicine ,Adult ,Male ,amyotrophic lateral sclerosis ,Cytoplasmic inclusion ,Peptide ,Pathology and Forensic Medicine ,03 medical and health sciences ,0302 clinical medicine ,Alzheimer Disease ,mental disorders ,medicine ,Humans ,LATE ,Amyotrophic lateral sclerosis ,Pathological ,Research Articles ,Aged ,proteomic biomarker ,chemistry.chemical_classification ,Aged, 80 and over ,Inclusion Bodies ,General Neuroscience ,nutritional and metabolic diseases ,Brain ,Human brain ,Middle Aged ,medicine.disease ,Spinal cord ,Molecular biology ,Highly sensitive ,Cortex (botany) ,nervous system diseases ,DNA-Binding Proteins ,TDP‐43 ,030104 developmental biology ,medicine.anatomical_structure ,chemistry ,TDP-43 Proteinopathies ,Female ,Neurology (clinical) ,Alzheimer’s disease ,030217 neurology & neurosurgery ,Research Article - Abstract
The pathological hallmark of amyotrophic lateral sclerosis (ALS) is the presence of cytoplasmic inclusions, containing C‐terminal fragments of the protein TDP‐43. Here, we tested the hypothesis that highly sensitive mass spectrometry with parallel reaction monitoring (MS‐PRM) can generate a high‐resolution map of pathological TDP‐43 peptide ratios to form the basis for quantitation of abnormal C‐terminal TDP‐43 fragment enrichment. Human cortex and spinal cord, microscopically staged for the presence of p‐TDP‐43, p‐tau, alpha‐synuclein, and beta‐amyloid pathology, were biochemically fractionated and analyzed by immunoblot and MS for the detection of full‐length and truncated (disease‐specific) TDP‐43 peptides. This informed the synthesis of heavy isotope‐labeled peptides for absolute quantification of TDP‐43 by MS‐PRM across 16 ALS, 8 Parkinson’s, 8 Alzheimer’s disease, and 8 aged control cases. We confirmed by immunoblot the previously described enrichment of pathological C‐terminal fragments in ALS‐TDP urea fractions. Subsequent MS analysis resolved specific TDP‐43 N‐ and C‐terminal peptides, including a novel N‐terminal truncation site‐specific peptide. Absolute quantification of peptides by MS‐PRM showed an increased C:N‐terminal TDP‐43 peptide ratio in ALS‐TDP brain compared to normal and disease controls. A C:N‐terminal ratio >1.5 discriminated ALS from controls with a sensitivity of 100% (CI 79.6–100) and specificity of 100% (CI 68–100), and from Parkinson’s and Alzheimer’s disease with a sensitivity of 93% (CI 70–100) and specificity of 100% (CI 68–100). N‐terminal truncation site‐specific peptides were increased in ALS in line with C‐terminal fragment enrichment, but were also found in a proportion of Alzheimer cases with normal C:N‐terminal ratio but coexistent limbic TDP‐43 neuropathological changes. In conclusion this is a novel, sensitive, and specific method to quantify the enrichment of pathological TDP‐43 fragments in human brain, which could form the basis for an antibody‐free assay. Our methodology has the potential to help clarify if specific pathological TDP‐43 peptide signatures are associated with primary or secondary TDP‐43 proteinopathies., The pathological hallmark of amyotrophic lateral sclerosis (ALS) is the presence of cytoplasmic inclusions, containing C‐terminal fragments of the protein TDP‐43. Here, we used a high‐resolution map of TDP‐43 peptides to form the basis for absolute quantitation of abnormal C‐terminal TDP‐43 fragment enrichment. The C:N‐terminal peptide ratio is increased in ALS brains and N‐terminal truncation‐specific peptides confirm the pathological cleavage of TDP‐43 in ALS and surprisingly AD.
- Published
- 2021
- Full Text
- View/download PDF
31. The Role of Mitochondrial Dysfunction and ER Stress in TDP-43 and C9ORF72 ALS
- Author
-
Ruxandra Dafinca, Kevin Talbot, and Paola Barbagallo
- Subjects
0301 basic medicine ,TDP-43 ,Mini Review ,Cellular homeostasis ,UPR ,Biology ,Mitochondrion ,lcsh:RC321-571 ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,0302 clinical medicine ,C9orf72 ,medicine ,Amyotrophic lateral sclerosis ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,calcium homeostasis ,Endoplasmic reticulum ,Autophagy ,medicine.disease ,Cell biology ,mitochondria ,endoplasmic reticulum ,030104 developmental biology ,Proteostasis ,Cellular Neuroscience ,Unfolded protein response ,ALS ,030217 neurology & neurosurgery - Abstract
Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disease of the motor system with complex determinants, including genetic and non-genetic factors. Despite this heterogeneity, a key pathological signature is the mislocalization and aggregation of specific proteins in the cytoplasm, suggesting that convergent pathogenic mechanisms focusing on disturbances in proteostasis are important in ALS. In addition, many cellular processes have been identified as potentially contributing to disease initiation and progression, such as defects in axonal transport, autophagy, nucleocytoplasmic transport, ER stress, calcium metabolism, the unfolded protein response and mitochondrial function. Here we review the evidence from in vitro and in vivo models of C9ORF72 and TDP-43-related ALS supporting a central role in pathogenesis for endoplasmic reticulum stress, which activates an unfolded protein response (UPR), and mitochondrial dysfunction. Disruption in the finely tuned signaling between the ER and mitochondria through calcium ions may be a crucial trigger of mitochondrial deficits and initiate an apoptotic signaling cascade, thus acting as a point of convergence for multiple upstream disturbances of cellular homeostasis and constituting a potentially important therapeutic target.
- Published
- 2021
- Full Text
- View/download PDF
32. Axonal TDP-43 condensates drive neuromuscular junction disruption through inhibition of local synthesis of nuclear encoded mitochondrial proteins
- Author
-
Ruxandra Dafinca, Topaz Altman, Amjad Ibraheem, Noam Shomron, Michael E. Ward, Natalia Shelestovich, Kevin Talbot, Dominik Priesmann, Eran Perlson, Tal Gradus-Pery, Luba Farberov, Florence Rage, Gayster Alexandra, Amir Dori, Marcus Krüger, and Ariel Ionescu
- Subjects
General Physics and Astronomy ,Mice ,Protein biosynthesis ,Amyotrophic lateral sclerosis ,Phosphorylation ,Poly-ADP-Ribose Binding Proteins ,Ribonucleoprotein ,Motor Neurons ,Neurons ,Multidisciplinary ,Chemistry ,Translation (biology) ,Neurodegenerative Diseases ,Cell biology ,Mitochondria ,DNA-Binding Proteins ,Inhibition, Psychological ,medicine.anatomical_structure ,RNA Recognition Motif Proteins ,Female ,RNA Helicases ,Science ,Induced Pluripotent Stem Cells ,Neuromuscular Junction ,DNA-binding protein ,General Biochemistry, Genetics and Molecular Biology ,Neuromuscular junction ,Article ,Mitochondrial Proteins ,Neurons, Efferent ,mental disorders ,medicine ,Animals ,Humans ,Mitochondrial protein ,C9orf72 Protein ,Amyotrophic Lateral Sclerosis ,DNA Helicases ,RNA ,nutritional and metabolic diseases ,General Chemistry ,medicine.disease ,Axons ,Cellular neuroscience ,nervous system diseases ,Mice, Inbred C57BL ,Disease Models, Animal ,nervous system ,Diseases of the nervous system - Abstract
Mislocalization of the predominantly nuclear RNA/DNA binding protein, TDP-43, occurs in motor neurons of ~95% of amyotrophic lateral sclerosis (ALS) patients, but the contribution of axonal TDP-43 to this neurodegenerative disease is unclear. Here, we show TDP-43 accumulation in intra-muscular nerves from ALS patients and in axons of human iPSC-derived motor neurons of ALS patient, as well as in motor neurons and neuromuscular junctions (NMJs) of a TDP-43 mislocalization mouse model. In axons, TDP-43 is hyper-phosphorylated and promotes G3BP1-positive ribonucleoprotein (RNP) condensate assembly, consequently inhibiting local protein synthesis in distal axons and NMJs. Specifically, the axonal and synaptic levels of nuclear-encoded mitochondrial proteins are reduced. Clearance of axonal TDP-43 or dissociation of G3BP1 condensates restored local translation and resolved TDP-43-derived toxicity in both axons and NMJs. These findings support an axonal gain of function of TDP-43 in ALS, which can be targeted for therapeutic development., Here, the authors show in human iPSC-derived motor neurons from ALS patients and a TDP-43 mouse model that axonal TDP-43 forms G3BP1 positive RNP condensates, which sequester mRNA of nuclear encoded mitochondrial proteins and decrease local protein synthesis in motor neuron axons and neuromuscular junctions.
- Published
- 2021
33. Modelling seeding and neuroanatomic spread of pathology in amyotrophic lateral sclerosis
- Author
-
Menke Ral., Sneha Pandya, Benjamin S. Freeze, Pedro D. Maia, Ashish Raj, Martin R Turner, and Kevin Talbot
- Subjects
Pathology ,medicine.medical_specialty ,Basal ganglia ,Thalamus ,medicine ,Primary motor cortex ,Amyotrophic lateral sclerosis ,Biology ,medicine.disease ,Staging system ,Pathological ,Insula ,Frontotemporal dementia - Abstract
The neurodegenerative disorder amyotrophic lateral sclerosis (ALS) is characterized by the progressive loss of upper and lower motor neurons, with pathological involvement of cerebral motor and, additionally, extra-motor areas, in a clinicopathological spectrum with frontotemporal dementia (FTD). A key unresolved question is whether the distribution of pathology in ALS is driven by molecular factors such as regional gene expression, by differential network vulnerability, or is a combination of both. A system of histopathological staging of ALS based on the regional burden of TDP-43 pathology observed in post mortem brains has been supported to some extent by analysis of distribution of in vivo structural MRI changes. In this paper, computational modelling using a Network Diffusion Model (NDM) was used to investigate whether a process of focal pathological ‘seeding’ followed by structural network-based spread recapitulated post mortem histopathological staging and, secondly, whether this had any relationship to the pattern of expression of a panel of genes implicated in ALS across the healthy brain. Regionally parcellated T1-weighted MRI data from ALS patients (baseline n=79) was studied in relation to a healthy control structural connectome and a database of associated regional cerebral gene expression. The NDM provided strong support for a structural network-based basis for regional pathological spread in ALS, but no simple relationship to the spatial distribution of ALS-related genes in the healthy brain. Intriguingly, the critical seed regions for spread within the model were not within the primary motor cortex but basal ganglia, thalamus and insula, where NDM recapitulated aspects of the post mortem histopathological staging system. Within the ALS-FTD clinicopathological spectrum, non-primary motor structures may be among the earliest sites of cerebral pathology.
- Published
- 2021
- Full Text
- View/download PDF
34. A fine balance between Prpf19 and Exoc7 in achieving degradation of aggregated protein and suppression of cell death in spinocerebellar ataxia type 3
- Author
-
Ho Yin Edwin Chan, Kevin Talbot, Zhefan Stephen Chen, and Xiaoying Huang
- Subjects
0301 basic medicine ,Proteasome Endopeptidase Complex ,Cancer Research ,Cell death in the nervous system ,Immunology ,Vesicular Transport Proteins ,Protein aggregation ,Protein Aggregation, Pathological ,Article ,Animals, Genetically Modified ,Protein Aggregates ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,0302 clinical medicine ,Ubiquitin ,Cell Line, Tumor ,medicine ,Animals ,Drosophila Proteins ,Humans ,lcsh:QH573-671 ,Ataxin-3 ,Neurons ,Cell Death ,biology ,lcsh:Cytology ,Neurodegeneration ,Nuclear Proteins ,Machado-Joseph Disease ,Cell Biology ,medicine.disease ,Protein ubiquitination ,Ubiquitin ligase ,Cell biology ,Repressor Proteins ,EXOC7 ,Disease Models, Animal ,DNA Repair Enzymes ,Drosophila melanogaster ,HEK293 Cells ,030104 developmental biology ,Proteolysis ,biology.protein ,Spinocerebellar ataxia ,RNA Splicing Factors ,Peptides ,030217 neurology & neurosurgery ,Nuclear localization sequence - Abstract
Polyglutamine (polyQ) diseases comprise Huntington’s disease and several subtypes of spinocerebellar ataxia, including spinocerebellar ataxia type 3 (SCA3). The genomic expansion of coding CAG trinucleotide sequence in disease genes leads to the production and accumulation of misfolded polyQ domain-containing disease proteins, which cause cellular dysfunction and neuronal death. As one of the principal cellular protein clearance pathways, the activity of the ubiquitin–proteasome system (UPS) is tightly regulated to ensure efficient clearance of damaged and toxic proteins. Emerging evidence demonstrates that UPS plays a crucial role in the pathogenesis of polyQ diseases. Ubiquitin (Ub) E3 ligases catalyze the transfer of a Ub tag to label proteins destined for proteasomal clearance. In this study, we identified an E3 ligase, pre-mRNA processing factor 19 (Prpf19/prp19), that modulates expanded ataxin-3 (ATXN3-polyQ), disease protein of SCA3, induced neurodegeneration in both mammalian and Drosophila disease models. We further showed that Prpf19/prp19 promotes poly-ubiquitination and degradation of mutant ATXN3-polyQ protein. Our data further demonstrated the nuclear localization of Prpf19/prp19 is essential for eliciting its modulatory function towards toxic ATXN3-polyQ protein. Intriguingly, we found that exocyst complex component 7 (Exoc7/exo70), a Prpf19/prp19 interacting partner, modulates expanded ATXN3-polyQ protein levels and toxicity in an opposite manner to Prpf19/prp19. Our data suggest that Exoc7/exo70 exerts its ATXN3-polyQ-modifying effect through regulating the E3 ligase function of Prpf19/prp19. In summary, this study allows us to better define the mechanistic role of Exoc7/exo70-regulated Prpf19/prp19-associated protein ubiquitination pathway in SCA3 pathogenesis.
- Published
- 2021
- Full Text
- View/download PDF
35. Leukoencephalopathy with calcifications and cysts: Genetic and phenotypic spectrum
- Author
-
Calvin Soh, Sophie Calvert, Ram L. Kumar, Isabelle Desguerre, Kevin Talbot, Evangeline Wassmer, Axel Panzer, Andrea Berger, Anna de Burca, Anu Jacob, Andrea Whitney, Andrew P. Badrock, Frances Gibbon, Shelley MacDonald, Rhys H. Thomas, Reza Maroofian, Heather Burnett, Elizabeth Jones, Thomas Blauwblomme, Francois V. Bolduc, Jamal Ghoumid, Mickaël Ferrand, Yanick J. Crow, Emma M. Jenkinson, Camilo Toro, Diana Chiang, Roseline Caumes, Gillian I. Rice, Gemma Fisher, Gopinath M. Subramanian, Edoardo Monfrini, Renaud Touraine, Hilde T. Hilmarsen, Sarju G. Mehta, Imelda Hughes, Sumit Parikh, Edward Blair, Mary O'Driscoll, Sarah Dyack, Himanshu Goel, Kristin W. Barañano, Prab Prabhakar, Luis Seabra, Roberta Battini, John H. Livingston, Russell P. Saneto, Richard J. Leventer, Katrin Õunap, Heather Marshall, Andy Cheuk Him Ng, Duccio Maria Cordelli, Natasha Demic, Daniela Neumann, Natalie Boddaert, Michael J. Noetzel, S. Richard Dunham, Ehsan Ghayoor Karimiani, Johannes A. Buckard, Frances Elmslie, Raymond T. O'Keefe, Chloe A Stutterd, Richard Sandford, Imke Metz, Francis Ramond, Liesbeth De Waele, Alessio Di Fonzo, Emma Wakeling, David B. Clifford, Crow Y.J., Marshall H., Rice G.I., Seabra L., Jenkinson E.M., Baranano K., Battini R., Berger A., Blair E., Blauwblomme T., Bolduc F., Boddaert N., Buckard J., Burnett H., Calvert S., Caumes R., Ng A.C.-H., Chiang D., Clifford D.B., Cordelli D.M., de Burca A., Demic N., Desguerre I., De Waele L., Di Fonzo A., Dunham S.R., Dyack S., Elmslie F., Ferrand M., Fisher G., Karimiani E.G., Ghoumid J., Gibbon F., Goel H., Hilmarsen H.T., Hughes I., Jacob A., Jones E.A., Kumar R., Leventer R.J., MacDonald S., Maroofian R., Mehta S.G., Metz I., Monfrini E., Neumann D., Noetzel M., O'Driscoll M., Ounap K., Panzer A., Parikh S., Prabhakar P., Ramond F., Sandford R., Saneto R., Soh C., Stutterd C.A., Subramanian G.M., Talbot K., Thomas R.H., Toro C., Touraine R., Wakeling E., Wassmer E., Whitney A., Livingston J.H., O'Keefe R.T., and Badrock A.P.
- Subjects
Male ,0301 basic medicine ,Proband ,030105 genetics & heredity ,Gene mutation ,ribosomopathy ,Compound heterozygosity ,Genetic analysis ,Loss of heterozygosity ,Leukoencephalopathy ,Consanguinity ,Leukoencephalopathies ,Pathology, Molecular ,Child ,Zebrafish ,Genetics (clinical) ,Genetics ,Molecular pathology ,C/D box snoRNA U8 ,coats plus ,Labrune syndrome ,leukoencephalopathy with calcifications and cysts ,SNORD118 ,Calcinosis ,Middle Aged ,3. Good health ,Child, Preschool ,Female ,Adult ,Heterozygote ,Adolescent ,coats plu ,Biology ,Young Adult ,03 medical and health sciences ,medicine ,Animals ,Humans ,RNA, Small Nucleolar ,Genetic Association Studies ,Aged ,leukoencephalopathy with calcifications and cyst ,Infant, Newborn ,Infant ,medicine.disease ,Disease Models, Animal ,030104 developmental biology - Abstract
Biallelic mutations in SNORD118, encoding the small nucleolar RNA U8, cause leukoencephalopathy with calcifications and cysts (LCC). Given the difficulty in interpreting the functional consequences of variants in nonprotein encoding genes, and the high allelic polymorphism across SNORD118 in controls, we set out to provide a description of the molecular pathology and clinical spectrum observed in a cohort of patients with LCC. We identified 64 affected individuals from 56 families. Age at presentation varied from 3 weeks to 67 years, with disease onset after age 40 years in eight patients. Ten patients had died. We recorded 44 distinct, likely pathogenic, variants in SNORD118. Fifty two of 56 probands were compound heterozygotes, with parental consanguinity reported in only three families. Forty nine of 56 probands were either heterozygous (46) or homozygous (three) for a mutation involving one of seven nucleotides that facilitate a novel intramolecular interaction between the 5' end and 3' extension of precursor-U8. There was no obvious genotype-phenotype correlation to explain the marked variability in age at onset. Complementing recently published functional analyses in a zebrafish model, these data suggest that LCC most often occurs due to combinatorial severe and milder mutations, with the latter mostly affecting 3' end processing of precursor-U8.
- Published
- 2021
36. Multimodal MRI demonstrates task-related cortical hyper-activation and neuro- chemical alteration in amyotrophic lateral sclerosis
- Author
-
Evan C Edmond, Thanuja Dharmadasa, William Clarke, Kevin Talbot, Charlotte J Stagg, and Martin R Turner
- Subjects
Psychiatry and Mental health ,Surgery ,Neurology (clinical) - Abstract
BackgroundThere is a paucity of reliable markers of disease activity and progression in ALS. Better biomarkers would also reduce clinical trial duration and cost by providing more sensitive measures of target engagement. Cortical hyperexcitability with transcranial magnetic stimulation, while promising, has not yet been clinically translatable. Multimodal correlation of cortical hyperexcitability could yield more robust composite biomarkers.MethodsThis project applies multimodal non-invasive neuroimaging (MRI, MEG) and neurophysiol- ogy (TMS) to explore cortical hyperexcitability in ALS. 11 affected ALS patients, 9 age matched healthy controls and 13 asymptomatic relatives at-risk of inheriting the disease-causing C9orf72 hexanucleotide repeat expansion were studied. MRI findings are reported here (diffusion-tensor imaging [DTI], functional MRI and MR spectroscopy).ResultsRight cortical activation with contralateral finger movement was significantly increased in patients (p = 0.04), while right cortical de-activation with ipsilateral movement was lost (p = 0.01). N-acetyl-aspar- tate (p=0.04) and glutamate (p = 0.01) are significantly reduced in patients. At-risk relatives occupy an intermediate profile.DiscussionBilateral motor cortex hyperexcitability was found in ALS. Asymmetry in task-related activa- tion is consistent with previously reported loss of cortical inhibition in early ALS. Integration of multimodal imaging and neurophysiological data could explain variable phenotype and disease mechanisms in ALS.eedmond@gmail.com
- Published
- 2022
- Full Text
- View/download PDF
37. Network Analysis of the CSF Proteome Characterizes Convergent Pathways of Cellular Dysfunction in ALS
- Author
-
Alexander G. Thompson, Benedikt M. Kessler, Philip D. Charles, Hu Mtm., Kevin Talbot, Roman Fischer, Elizabeth Gray, and Martin R Turner
- Subjects
amyotrophic lateral sclerosis ,WGCNA ,General Neuroscience ,Weighted correlation network analysis ,Computational biology ,Biology ,Proteomics ,medicine.disease ,cerebrospinal fluid ,lcsh:RC321-571 ,proteomics ,Membrane protein ,Gene expression ,Proteome ,medicine ,motor neuron disease ,biomarker ,Glutamatergic synapse ,Amyotrophic lateral sclerosis ,proteomics & bioinformatics ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,network analysis ,CSF albumin ,Neuroscience ,Original Research - Abstract
BackgroundAmyotrophic lateral sclerosis is a clinical syndrome with complex biological determinants, but which in most cases is characterized by TDP-43 pathology. The identification in CSF of a protein signature of TDP-43 network dysfunction would have the potential to inform the identification of new biomarkers and therapeutic targets.MethodsWe compared CSF proteomic data from patients with ALS (n = 41), Parkinson’s disease (n = 19) and healthy control participants (n = 20). Weighted correlation network analysis was used to identify modules within the CSF protein network and combined with gene ontology enrichment analysis to functionally annotate module proteins. Analysis of module eigenproteins and differential correlation analysis of the CSF protein network was used to compare ALS and Parkinson’s disease protein co-correlation with healthy controls. In order to monitor temporal changes in the CSF proteome, we performed longitudinal analysis of the CSF proteome in a subset of ALS patients.ResultsWeighted correlation network analysis identified 10 modules, including those enriched for terms involved in gene expression including nucleic acid binding, RNA metabolism and translation; humoral immune system function, including complement pathways; membrane proteins, axonal outgrowth and adherence; and glutamatergic synapses. Immune system module eigenproteins were increased in ALS, whilst axonal module eigenproteins were decreased in ALS. The 19 altered protein correlations in ALS were enriched for gene expression (OR 3.05, p = 0.017) and membrane protein modules (OR 17.48, p = 0.011), including intramodular hub proteins previously identified as TDP-43 interactors. Proteins decreasing over longitudinal analysis ALS were enriched in glutamatergic synapse and axonal outgrowth modules. Protein correlation network disruptions in Parkinson’s disease showed no module enrichment.ConclusionsAlterations in the co-correlation network in CSF samples identified a set of pathways known to be associated with TDP-43 dysfunction in the pathogenesis of ALS, with important implications for therapeutic targeting and biomarker development.
- Published
- 2020
38. Isolated homozygous R217X
- Author
-
Matthew, Nolan, Paola, Barbagallo, Martin R, Turner, Michael John, Keogh, Patrick F, Chinnery, Kevin, Talbot, and Olaf, Ansorge
- Subjects
Oligodendroglia ,neuropathology ,Amyotrophic Lateral Sclerosis ,Mutation ,Motor Cortex ,Humans ,Membrane Transport Proteins ,Cell Cycle Proteins ,genetics ,PostScript ,ALS - Published
- 2020
39. Pathogenic huntingtin repeat expansions in patients with frontotemporal dementia and amyotrophic lateral sclerosis
- Author
-
Ramita Dewan, Ruth Chia, Jinhui Ding, Richard A. Hickman, Thor D. Stein, Yevgeniya Abramzon, Sarah Ahmed, Marya S. Sabir, Makayla K. Portley, Arianna Tucci, Kristina Ibáñez, F.N.U. Shankaracharya, Pamela Keagle, Giacomina Rossi, Paola Caroppo, Fabrizio Tagliavini, Maria L. Waldo, Per M. Johansson, Christer F. Nilsson, James B. Rowe, Luisa Benussi, Giuliano Binetti, Roberta Ghidoni, Edwin Jabbari, Coralie Viollet, Jonathan D. Glass, Andrew B. Singleton, Vincenzo Silani, Owen A. Ross, Mina Ryten, Ali Torkamani, Toshiko Tanaka, Luigi Ferrucci, Susan M. Resnick, Stuart Pickering-Brown, Christopher B. Brady, Neil Kowal, John A. Hardy, Vivianna Van Deerlin, Jean Paul Vonsattel, Matthew B. Harms, Huw R. Morris, Raffaele Ferrari, John E. Landers, Adriano Chiò, J. Raphael Gibbs, Clifton L. Dalgard, Sonja W. Scholz, Bryan J. Traynor, Adelani Adeleye, Camille Alba, Dagmar Bacikova, Daniel N. Hupalo, Elisa McGrath Martinez, Harvey B. Pollard, Gauthaman Sukumar, Anthony R. Soltis, Meila Tuck, Xijun Zhang, Matthew D. Wilkerson, Bradley N. Smith, Nicola Ticozzi, Claudia Fallini, Athina Soragia Gkazi, Simon D. Topp, Jason Kost, Emma L. Scotter, Kevin P. Kenna, Jack W. Miller, Cinzia Tiloca, Caroline Vance, Eric W. Danielson, Claire Troakes, Claudia Colombrita, Safa Al-Sarraj, Elizabeth A. Lewis, Andrew King, Daniela Calini, Viviana Pensato, Barbara Castellotti, Jacqueline de Belleroche, Frank Baas, Anneloor L.M.A. ten Asbroek, Peter C. Sapp, Diane McKenna-Yasek, Russell L. McLaughlin, Meraida Polak, Seneshaw Asress, Jesús Esteban-Pérez, José Luis Muñoz-Blanco, Zorica Stevic, Sandra D’Alfonso, Letizia Mazzini, Giacomo P. Comi, Roberto Del Bo, Mauro Ceroni, Stella Gagliardi, Giorgia Querin, Cinzia Bertolin, Wouter van Rheenen, Frank P. Diekstra, Rosa Rademakers, Marka van Blitterswijk, Kevin B. Boylan, Giuseppe Lauria, Stefano Duga, Stefania Corti, Cristina Cereda, Lucia Corrado, Gianni Sorarù, Kelly L. Williams, Garth A. Nicholson, Ian P. Blair, Claire Leblond-Manry, Guy A. Rouleau, Orla Hardiman, Karen E. Morrison, Jan H. Veldink, Leonard H. van den Berg, Ammar Al-Chalabi, Hardev Pall, Pamela J. Shaw, Martin R. Turner, Kevin Talbot, Franco Taroni, Alberto García-Redondo, Zheyang Wu, Cinzia Gellera, Antonia Ratti, Robert H. Brown, Christopher E. Shaw, John C. Ambrose, Prabhu Arumugam, Emma L. Baple, Marta Bleda, Freya Boardman-Pretty, Jeanne M. Boissiere, Christopher R. Boustred, H. Brittain, Mark J. Caulfield, Georgia C. Chan, Clare E.H. Craig, Louise C. Daugherty, Anna de Burca, Andrew Devereau, Greg Elgar, Rebecca E. Foulger, Tom Fowler, Pedro Furió-Tarí, Joanne M. Hackett, Dina Halai, Angela Hamblin, Shirley Henderson, James E. Holman, Tim J.P. Hubbard, Rob Jackson, Louise J. Jones, Dalia Kasperaviciute, Melis Kayikci, Lea Lahnstein, Kay Lawson, Sarah E.A. Leigh, Ivonne U.S. Leong, Javier F. Lopez, Fiona Maleady-Crowe, Joanne Mason, Ellen M. McDonagh, Loukas Moutsianas, Michael Mueller, Nirupa Murugaesu, Anna C. Need, Chris A. Odhams, Christine Patch, Daniel Perez-Gil, Dimitris Polychronopoulos, John Pullinger, Tahrima Rahim, Augusto Rendon, Pablo Riesgo-Ferreiro, Tim Rogers, Kevin Savage, Kushmita Sawant, Richard H. Scott, Afshan Siddiq, Alexander Sieghart, Damian Smedley, Katherine R. Smith, Alona Sosinsky, William Spooner, Helen E. Stevens, Alexander Stuckey, Razvan Sultana, Ellen R.A. Thomas, Simon R. Thompson, Carolyn Tregidgo, Emma Walsh, Sarah A. Watters, Matthew J. Welland, Eleanor Williams, Katarzyna Witkowska, Suzanne M. Wood, Magdalena Zarowiecki, Sampath Arepalli, Pavan Auluck, Robert H. Baloh, Robert Bowser, Alexis Brice, James Broach, William Camu, John Cooper-Knock, Philippe Corcia, Carsten Drepper, Vivian E. Drory, Travis L. Dunckley, Faraz Faghri, Jennifer Farren, Eva Feldman, Mary Kay Floeter, Pietro Fratta, Glenn Gerhard, Summer B. Gibson, Stephen A. Goutman, Terry D. Heiman-Patterson, Dena G. Hernandez, Ben Hoover, Lilja Jansson, Freya Kamel, Janine Kirby, Neil W. Kowall, Hannu Laaksovirta, Francesco Landi, Isabelle Le Ber, Serge Lumbroso, Daniel JL. MacGowan, Nicholas J. Maragakis, Gabriele Mora, Kevin Mouzat, Liisa Myllykangas, Mike A. Nalls, Richard W. Orrell, Lyle W. Ostrow, Roger Pamphlett, Erik Pioro, Stefan M. Pulst, John M. Ravits, Alan E. Renton, Wim Robberecht, Ian Robey, Ekaterina Rogaeva, Jeffrey D. Rothstein, Michael Sendtner, Katie C. Sidle, Zachary Simmons, David J. Stone, Pentti J. Tienari, John Q. Trojanowski, Juan C. Troncoso, Miko Valori, Philip Van Damme, Ludo Van Den Bosch, Lorne Zinman, Diego Albani, Barbara Borroni, Alessandro Padovani, Amalia Bruni, Jordi Clarimon, Oriol Dols-Icardo, Ignacio Illán-Gala, Alberto Lleó, Adrian Danek, Daniela Galimberti, Elio Scarpini, Maria Serpente, Caroline Graff, Huei-Hsin Chiang, Behzad Khoshnood, Linn Öijerstedt, Christopher M. Morris, Benedetta Nacmias, Sandro Sorbi, Jorgen E. Nielsen, Lynne E. Hjermind, Valeria Novelli, Annibale A. Puca, Pau Pastor, Ignacio Alvarez, Monica Diez-Fairen, Miquel Aguilar, Robert Perneczky, Janine Diehl-Schimd, Mina Rossi, Agustin Ruiz, Mercè Boada, Isabel Hernández, Sonia Moreno-Grau, Johannes C. Schlachetzki, Dag Aarsland, Marilyn S. Albert, Johannes Attems, Matthew J. Barrett, Thomas G. Beach, Lynn M. Bekris, David A. Bennett, Lilah M. Besser, Eileen H. Bigio, Sandra E. Black, Bradley F. Boeve, Ryan C. Bohannan, Francesca Brett, Maura Brunetti, Chad A. Caraway, Jose-Alberto Palma, Andrea Calvo, Antonio Canosa, Dennis Dickson, Charles Duyckaerts, Kelley Faber, Tanis Ferman, Margaret E. Flanagan, Gianluca Floris, Tatiana M. Foroud, Juan Fortea, Ziv Gan-Or, Steve Gentleman, Bernardino Ghetti, Jesse Raphael Gibbs, Alison Goate, David Goldstein, Isabel González-Aramburu, Neill R. Graff-Radford, Angela K. Hodges, Heng-Chen Hu, Daniel Hupalo, Jon Infante, Alex Iranzo, Scott M. Kaiser, Horacio Kaufmann, Julia Keith, Ronald C. Kim, Gregory Klein, Rejko Krüger, Walter Kukull, Amanda Kuzma, Carmen Lage, Suzanne Lesage, James B. Leverenz, Giancarlo Logroscino, Grisel Lopez, Seth Love, Qinwen Mao, Maria Jose Marti, Elisa Martinez-McGrath, Mario Masellis, Eliezer Masliah, Patrick May, Ian McKeith, Marek-Marsel Mesulam, Edwin S. Monuki, Kathy L. Newell, Lucy Norcliffe-Kaufmann, Laura Palmer, Matthew Perkins, Olga Pletnikova, Laura Molina-Porcel, Regina H. Reynolds, Eloy Rodríguez-Rodríguez, Jonathan D. Rohrer, Pascual Sanchez-Juan, Clemens R. Scherzer, Geidy E. Serrano, Vikram Shakkottai, Ellen Sidransky, Nahid Tayebi, Alan J. Thomas, Bension S. Tilley, Ronald L. Walton, Randy Woltjer, Zbigniew K. Wszolek, Georgia Xiromerisiou, Chiara Zecca, Hemali Phatnani, Justin Kwan, Dhruv Sareen, James R. Broach, Ximena Arcila-Londono, Edward B. Lee, Neil A. Shneider, Ernest Fraenkel, Noah Zaitlen, James D. Berry, Andrea Malaspina, Gregory A. Cox, Leslie M. Thompson, Steve Finkbeiner, Efthimios Dardiotis, Timothy M. Miller, Siddharthan Chandran, Suvankar Pal, Eran Hornstein, Daniel J. MacGowan, Terry Heiman-Patterson, Molly G. Hammell, Nikolaos.A. Patsopoulos, Oleg Butovsky, Joshua Dubnau, Avindra Nath, Matt Harms, Eleonora Aronica, Mary Poss, Jennifer Phillips-Cremins, John Crary, Nazem Atassi, Dale J. Lange, Darius J. Adams, Leonidas Stefanis, Marc Gotkine, Suma Babu, Towfique Raj, Sabrina Paganoni, Ophir Shalem, Colin Smith, Bin Zhang, Brent Harris, Iris Broce, Vivian Drory, John Ravits, Corey McMillan, Vilas Menon, Lani Wu, Steven Altschuler, Khaled Amar, Neil Archibald, Oliver Bandmann, Erica Capps, Alistair Church, Jan Coebergh, Alyssa Costantini, Peter Critchley, Boyd CP. Ghosh, Michele T.M. Hu, Christopher Kobylecki, P. Nigel Leigh, Carl Mann, Luke A. Massey, Uma Nath, Nicola Pavese, Dominic Paviour, Jagdish Sharma, Jenny Vaughan, HUS Neurocenter, Neurologian yksikkö, Department of Neurosciences, Clinicum, Pentti Tienari / Principal Investigator, Parkinson's UK, Human Genetics, ARD - Amsterdam Reproduction and Development, ANS - Complex Trait Genetics, Pathology, ANS - Cellular & Molecular Mechanisms, AII - Inflammatory diseases, Universidad de Cantabria, Rowe, James [0000-0001-7216-8679], and Apollo - University of Cambridge Repository
- Subjects
0301 basic medicine ,Huntington's Disease ,Pathology ,amyotrophic lateral sclerosis ,Huntingtin ,Neurology ,1702 Cognitive Sciences ,International ALS/FTD Genomics Consortium ,Neurodegenerative ,frontotemporal dementia ,3124 Neurology and psychiatry ,0302 clinical medicine ,Medicine ,2.1 Biological and endogenous factors ,Psychology ,Amyotrophic lateral sclerosis ,Aetiology ,Alzheimer's Disease Related Dementias (ADRD) ,NYGC ALS Consortium ,Huntingtin Protein ,DNA Repeat Expansion ,General Neuroscience ,Frontotemporal Dementia (FTD) ,International FTD Genetics Consortium ,whole-genome sequencing ,Frontotemporal Dementia ,Neurological ,Cognitive Sciences ,Lewy body dementia ,huntingtin ,repeat expansions ,Amyotrophic Lateral Sclerosis ,Humans ,Mutation ,Whole Genome Sequencing ,Frontotemporal dementia ,Huntington’s disease ,medicine.medical_specialty ,congenital, hereditary, and neonatal diseases and abnormalities ,FALS Sequencing Consortium ,Article ,03 medical and health sciences ,Atrophy ,Rare Diseases ,American Genome Center ,Clinical Research ,mental disorders ,Genetics ,Acquired Cognitive Impairment ,Dementia ,PROSPECT Consortium ,Neurology & Neurosurgery ,Lewy body ,business.industry ,International LBD Genomics Consortium ,Neurosciences ,3112 Neurosciences ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,nutritional and metabolic diseases ,medicine.disease ,Brain Disorders ,nervous system diseases ,030104 developmental biology ,Genomics England Research Consortium ,1701 Psychology ,ALS ,business ,1109 Neurosciences ,030217 neurology & neurosurgery - Abstract
Hannu Laaksovirta konsortion jäsenenä. The Genomics England Research Consortium, The International ALS/FTD Genomics Consortium (iAFGC), The International FTD Genetics Consortium (IFGC), The International LBD Genomics Consortium (iLBDGC), The NYGC ALS Consortium, The PROSPECT Consortium,17 James B. Rowe,17 Luisa Benussi,18 Giuliano Binetti,18,19 Roberta Ghidoni,18 Edwin Jabbari,20,21 Coralie Viollet,22 Jonathan D. Glass,23 Andrew B. Singleton,24 Vincenzo Silani,25,26 Owen A. Ross,27 Mina Ryten,8,28,29 Ali Torkamani,30 Toshiko Tanaka,31 Luigi Ferrucci,31 Susan M. Resnick,32 We examined the role of repeat expansions in the pathogenesis of frontotemporal dementia (FTD) and amyotrophic lateral sclerosis (ALS) by analyzing whole-genome sequence data from 2,442 FTD/ALS patients, 2,599 Lewy body dementia (LBD) patients, and 3,158 neurologically healthy subjects. Pathogenic expansions (range, 40?64 CAG repeats) in the huntingtin (HTT) gene were found in three (0.12%) patients diagnosed with pure FTD/ALS syndromes but were not present in the LBD or healthy cohorts. We replicated our findings in an independent collection of 3,674 FTD/ALS patients. Postmortem evaluations of two patients revealed the classical TDP-43 pathology of FTD/ALS, as well as huntingtin-positive, ubiquitin-positive aggregates in the frontal cortex. The neostriatal atrophy that pathologically defines Huntington?s disease was absent in both cases. Our findings reveal an etiological relationship between HTT repeat expansions and FTD/ALS syndromes and indicate that genetic screening of FTD/ALS patients for HTT repeat expansions should be considered. We examined the role of repeat expansions in the pathogenesis of frontotemporal dementia (FTD) and amyotrophic lateral sclerosis (ALS) by analyzing whole-genome sequence data from 2,442 FTD/ALS patients, 2,599 Lewy body dementia (LBD) patients, and 3,158 neurologically healthy subjects. Pathogenic expansions (range, 40?64 CAG repeats) in the huntingtin (HTT) gene were found in three (0.12%) patients diagnosed with pure FTD/ALS syndromes but were not present in the LBD or healthy cohorts. We replicated our findings in an independent collection of 3,674 FTD/ALS patients. Postmortem evaluations of two patients revealed the classical TDP-43 pathology of FTD/ALS, as well as huntingtin-positive, ubiquitin-positive aggregates in the frontal cortex. The neostriatal atrophy that pathologically defines Huntington?s disease was absent in both cases. Our findings reveal an etiological relationship between HTT repeat expansions and FTD/ALS syndromes and indicate that genetic screening of FTD/ALS patients for HTT repeat expansions should be considered.
- Published
- 2020
- Full Text
- View/download PDF
40. Development of LNA Gapmer Oligonucleotide-Based Therapy for ALS/FTD Caused by the C9orf72 Repeat Expansion
- Author
-
Raquel Manzano, Yoshitsugu Aoki, Wood Mja., C. Sathyaprakash, Kevin Talbot, Miguel A. Varela, and Y Hashimoto
- Subjects
0301 basic medicine ,Immunoblotting ,Cell Culture Techniques ,Oligonucleotides ,Context (language use) ,medicine.disease_cause ,Transfection ,03 medical and health sciences ,Extracellular Vesicles ,0302 clinical medicine ,C9orf72 ,Freezing ,medicine ,Humans ,Locked nucleic acid ,Amyotrophic lateral sclerosis ,Cells, Cultured ,Skin ,Mutation ,DNA Repeat Expansion ,C9orf72 Protein ,Oligonucleotide ,business.industry ,Reverse Transcriptase Polymerase Chain Reaction ,Amyotrophic Lateral Sclerosis ,Genetic Therapy ,Fibroblasts ,medicine.disease ,030104 developmental biology ,Frontotemporal Dementia ,Cancer research ,Trinucleotide repeat expansion ,business ,030217 neurology & neurosurgery ,Frontotemporal dementia ,Plasmids - Abstract
Several neurodegenerative diseases, including amyotrophic lateral sclerosis (ALS), have a complex genetic background, in addition to cases where the disease appears to manifest sporadically. The recent discovery of the hexanucleotide repeat expansion in the C9orf72 gene as the causative agent of ALS (C9ALS) gives rise to the opportunity to develop new therapies directed at this mutation , which is responsible for a large proportion of ALS and/or frontotemporal dementia cases. Mammalian models conscientiously replicating the late-onset motor defects and cellular pathologies seen in human patients do not exist. In this context, patient-derived cells give us a platform to test potential antisense oligonucleotide therapies, which could be the key to treat this subtype of motor neuron disease. Recently, we described that locked nucleic acid gapmer oligonucleotide-based treatment targeting C9orf72 repeat expanded transcripts resulted in recovery from the disease-related phenotypes in patient-derived fibroblasts. Our findings highlight the therapeutic potential of C9ALS using this gapmer oligonucleotide-based approach.
- Published
- 2020
41. Correction of amyotrophic lateral sclerosis related phenotypes in induced pluripotent stem cell-derived motor neurons carrying a hexanucleotide expansion mutation in C9orf72 by CRISPR/Cas9 genome editing using homology-directed repair
- Author
-
Andrew G. L. Douglas, Ruxandra Dafinca, Paola Barbagallo, Martin R Turner, Nidaa A. Ababneh, Ana Candalija, Rowan Flynn, Jakub Scaber, David Sims, Kevin Talbot, and Sally A. Cowley
- Subjects
0301 basic medicine ,Genome instability ,Male ,Induced Pluripotent Stem Cells ,Cellular homeostasis ,Biology ,Homology directed repair ,03 medical and health sciences ,0302 clinical medicine ,Genome editing ,Genetics ,CRISPR ,Humans ,Molecular Biology ,Genetics (clinical) ,Gene Editing ,Motor Neurons ,DNA Repeat Expansion ,C9orf72 Protein ,Cas9 ,Amyotrophic Lateral Sclerosis ,Recombinational DNA Repair ,Cell Differentiation ,General Medicine ,030104 developmental biology ,Phenotype ,Female ,General Article ,CRISPR-Cas Systems ,Trinucleotide repeat expansion ,030217 neurology & neurosurgery - Abstract
The G4C2 hexanucleotide repeat expansion (HRE) in C9orf72 is the commonest cause of familial amyotrophic lateral sclerosis (ALS). A number of different methods have been used to generate isogenic control lines using clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9 and non-homologous end-joining by deleting the repeat region, with the risk of creating indels and genomic instability. In this study, we demonstrate complete correction of an induced pluripotent stem cell (iPSC) line derived from a C9orf72-HRE positive ALS/frontotemporal dementia patient using CRISPR/Cas9 genome editing and homology-directed repair (HDR), resulting in replacement of the excised region with a donor template carrying the wild-type repeat size to maintain the genetic architecture of the locus. The isogenic correction of the C9orf72 HRE restored normal gene expression and methylation at the C9orf72 locus, reduced intron retention in the edited lines and abolished pathological phenotypes associated with the C9orf72 HRE expansion in iPSC-derived motor neurons (iPSMNs). RNA sequencing of the mutant line identified 2220 differentially expressed genes compared with its isogenic control. Enrichment analysis demonstrated an over-representation of ALS relevant pathways, including calcium ion dependent exocytosis, synaptic transport and the Kyoto Encyclopedia of Genes and Genomes ALS pathway, as well as new targets of potential relevance to ALS pathophysiology. Complete correction of the C9orf72 HRE in iPSMNs by CRISPR/Cas9-mediated HDR provides an ideal model to study the earliest effects of the hexanucleotide expansion on cellular homeostasis and the key pathways implicated in ALS pathophysiology.
- Published
- 2020
42. Measuring quality of life in ALS/MND: validation of the WHOQOL-BREF
- Author
-
Carolyn A Young, Ashwin Pinto, G Burke, Tim Williams, Ammar Al-Chalabi, Kevin Talbot, Jannette Walsh, Roger J Mills, Christopher J McDermott, Tahir Majeed, C. Oliver Hanemann, Siddharthan Chandran, Timothy Harrower, John Ealing, Alan Tennant, and David Dick
- Subjects
education.field_of_study ,Rasch model ,Population ,Construct validity ,Contrast (statistics) ,Differential item functioning ,humanities ,03 medical and health sciences ,0302 clinical medicine ,Neurology ,Quality of life ,Scale (social sciences) ,Observational study ,Neurology (clinical) ,Psychology ,education ,030217 neurology & neurosurgery ,Clinical psychology - Abstract
Objectives: The World Health Organization Quality of Life-BREF Scale (WHOQOL-BREF) is a generic QOL measure with four domains covering Physical, Psychological, Social and Environment. Providing the opportunity to contrast QoL with other conditions, or with population norms, the current study had three aims: 1) can the established domains of the WHOQOL-BREF be validated within a large ALS/MND population; 2) can a total score be validated and 3) can they provide interval level measurement? Methods: Data were obtained from the Trajectories of Outcomes in Neurological Conditions study. Internal construct validity was determined by fit of the data to the Rasch measurement model. Results: 636 participants with ALS/MND were included. All domains, except the Social domain, showed satisfactory fit to the Rasch model. All were unidimensional, and showed no Differential Item Functioning by age, gender, or onset type. Finally, a total score was validated from a bi-factor perspective. Conclusions: The WHOQOL-BREF is valid for use in populations with ALS/MND and can be analyzed to yield interval level measurement: It offers a range of domains that reflect QOL, which can be used for parametric analysis and for comparison with other conditions or general populations, two advantages for its inclusion as a trial outcome measure and for observational studies.
- Published
- 2020
- Full Text
- View/download PDF
43. Identification of a potential non-coding RNA biomarker signature for amyotrophic lateral sclerosis
- Author
-
Martin R Turner, Andrea Malaspina, Sarah F. Newbury, Jochen H. Weishaupt, Kevin Talbot, Alexander G. Thompson, Elizabeth Gray, Albert C. Ludolph, P. Nigel Leigh, Greig Joilin, Yoana Bobeva, and Majid Hafezparast
- Subjects
0301 basic medicine ,Oncology ,medicine.medical_specialty ,amyotrophic lateral sclerosis ,non-coding RNA ,RNA-Seq ,Q0179.9 ,Disease ,Q1 ,Article ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,microRNA ,medicine ,Amyotrophic lateral sclerosis ,business.industry ,General Engineering ,RNA ,Non-coding RNA ,medicine.disease ,030104 developmental biology ,Biomarker (medicine) ,biomarker ,ALS ,RNA-seq ,business ,Motor neurone disease ,030217 neurology & neurosurgery - Abstract
Objective biomarkers for the clinically heterogeneous adult-onset neurodegenerative disorder amyotrophic lateral sclerosis are crucial to facilitate assessing emerging therapeutics and improve the diagnostic pathway in what is a clinically heterogeneous syndrome. With non-coding RNA transcripts including microRNA, piwi-RNA and transfer RNA present in human biofluids, we sought to identify whether non-coding RNA in serum could be biomarkers for amyotrophic lateral sclerosis. Serum samples from our Oxford Study for Biomarkers in motor neurone disease/amyotrophic lateral sclerosis discovery cohort of amyotrophic lateral sclerosis patients (n = 48), disease mimics (n = 16) and age- and sex-matched healthy controls (n = 24) were profiled for non-coding RNA expression using RNA-sequencing, which showed a wide range of non-coding RNA to be dysregulated. We confirmed significant alterations with reverse transcription-quantitative PCR in the expression of hsa-miR-16-5p, hsa-miR-21-5p, hsa-miR-92a-3p, hsa-piR-33151, TRV-AAC4-1.1 and TRA-AGC6-1.1. Furthermore, hsa-miR-206, a previously identified amyotrophic lateral sclerosis biomarker, showed a binary-like pattern of expression in our samples. Using the expression of these non-coding RNA, we were able to discriminate amyotrophic lateral sclerosis samples from healthy controls in our discovery cohort using a random forest analysis with 93.7% accuracy with promise in predicting progression rate of patients. Importantly, cross-validation of this novel signature using a new geographically distinct cohort of samples from the United Kingdom and Germany with both amyotrophic lateral sclerosis and control samples (n = 156) yielded an accuracy of 73.9%. The high prediction accuracy of this non-coding RNA-based biomarker signature, even across heterogeneous cohorts, demonstrates the strength of our approach as a novel platform to identify and stratify amyotrophic lateral sclerosis patients.
- Published
- 2020
44. CSF extracellular vesicle proteomics demonstrates altered protein homeostasis in amyotrophic lateral sclerosis
- Author
-
Marie-Laëtitia Thézénas, Imre Mäger, Elizabeth Gray, Kevin Talbot, Roman Fischer, Martin R Turner, Alexander G. Thompson, Philip D. Charles, Benedikt M. Kessler, and Mathew Wood
- Subjects
0301 basic medicine ,Clinical Biochemistry ,CSF ,Proteomics ,Exosome ,03 medical and health sciences ,0302 clinical medicine ,Downregulation and upregulation ,C9orf72 ,medicine ,Amyotrophic lateral sclerosis ,Molecular Biology ,Chemistry ,Research ,General Medicine ,Extracellular vesicle ,Biomarker ,medicine.disease ,Cell biology ,030104 developmental biology ,030220 oncology & carcinogenesis ,Proteome ,Molecular Medicine ,Proteasome core complex - Abstract
Background Extracellular vesicles (EVs) released by neurons and glia reach the cerebrospinal fluid (CSF). Studying the proteome of CSF-derived EVs offers a novel perspective on the key intracellular processes associated with the pathogenesis of the neurodegenerative disease amyotrophic lateral sclerosis (ALS) and a potential source from which to develop biomarkers. Methods CSF EVs were extracted using ultrafiltration liquid chromatography from ALS patients and controls. EV size distribution and concentration was measured using nanoparticle tracking analysis and liquid chromatography-tandem mass spectrometry proteomic analysis performed. Results CSF EV concentration and size distribution did not differ between ALS and control groups, nor between a sub-group of ALS patients with or without an associated hexanucleotide repeat expansion (HRE) in C9orf72. Univariate proteomic analysis identified downregulation of the pentameric proteasome-like protein Bleomycin hydrolase in ALS patients, whilst Gene Ontology enrichment analysis demonstrated downregulation of proteasome core complex proteins (8/8 proteins, normalized enrichment ratio -1.77, FDR-adjusted p = 0.057) in the ALS group. The sub-group of ALS patients associated with the C9orf72 HRE showed upregulation in Ubiquitin-like modifying-activating protein 1 (UBA1) compared to non-C9orf72 cases. Conclusions Proteomic analysis of CSF EVs in ALS detects intracellular alterations in protein homeostatic mechanisms, previously only identified in pathological tissues. This supports the wider use of CSF EVs as a source of novel biomarkers reflecting key and potentially druggable pathological intracellular pathway alterations in ALS.
- Published
- 2020
45. Primary lateral sclerosis: diagnosis and management
- Author
-
Martin R Turner and Kevin Talbot
- Subjects
medicine.medical_specialty ,medicine.medical_treatment ,Diagnosis, Differential ,03 medical and health sciences ,0302 clinical medicine ,Physical medicine and rehabilitation ,medicine ,Dementia ,Humans ,Amyotrophic lateral sclerosis ,Motor Neuron Disease ,030304 developmental biology ,Primary Lateral Sclerosis ,Motor Neurons ,0303 health sciences ,business.industry ,Amyotrophic Lateral Sclerosis ,Spastic dysarthria ,Disease Management ,General Medicine ,medicine.disease ,Dysphagia ,Gastrostomy ,Progressive spasticity ,Neurology (clinical) ,medicine.symptom ,business ,Motor neurone disease ,030217 neurology & neurosurgery - Abstract
Primary lateral sclerosis (PLS) is a rare neurodegenerative disorder at the upper motor neurone extreme of the spectrum of motor neurone disease. The diagnosis is clinical and based on the characteristic features of slowly progressive spasticity beginning in the lower limbs, or more rarely with spastic dysarthria, typically presenting around 50 years of age. The absence of lower motor neurone involvement is considered to be a defining feature, but confident distinction of PLS from upper motor neurone-predominant forms of amyotrophic lateral sclerosis may be difficult in the first few years. Corticobulbar involvement in PLS is frequently accompanied by emotionality. While there may be dysphagia, gastrostomy is rarely required to maintain nutrition. Cognitive dysfunction is recognised, though dementia is rarely a prominent management issue. PLS is not necessarily life shortening. Specialised multidisciplinary care is recommended. Increasing international research cooperation is required if the aspiration of dedicated therapeutic trials for PLS is to be achieved.
- Published
- 2020
- Full Text
- View/download PDF
46. Impairment of mitochondrial calcium buffering links mutations in C9orf72 and TARDBP in iPS-derived motor neurons from patients with ALS/FTD
- Author
-
Jakub Scaber, Kevin Talbot, Sally A. Cowley, Ruxandra Dafinca, Ana Candalija, Lucy Farrimond, Nidaa A. Ababneh, Jane Vowles, Chaitra Sathyaprakash, and Paola Barbagallo
- Subjects
0301 basic medicine ,Cellular pathology ,Calbindins ,amyotrophic lateral sclerosis ,induced pluripotent stem cells ,TDP-43 ,Calcium buffering ,Excitotoxicity ,calcium buffering ,Glutamic Acid ,AMPA receptor ,Biology ,medicine.disease_cause ,Biochemistry ,TARDBP ,Mitochondrial Membrane Transport Proteins ,Receptors, N-Methyl-D-Aspartate ,Article ,Cell Line ,03 medical and health sciences ,0302 clinical medicine ,mitochondrial calcium buffering ,C9orf72 ,Genetics ,medicine ,Humans ,motor neurons ,Receptors, AMPA ,Amyotrophic lateral sclerosis ,Cation Transport Proteins ,C9orf72 Protein ,Calcium-Binding Proteins ,Glutamate receptor ,RNA sequencing ,Cell Biology ,medicine.disease ,Cell biology ,Mitochondria ,DNA-Binding Proteins ,030104 developmental biology ,Frontotemporal Dementia ,Mutation ,Calcium ,Calcium Channels ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
Summary TDP-43 dysfunction is common to 97% of amyotrophic lateral sclerosis (ALS) cases, including those with mutations in C9orf72. To investigate how C9ORF72 mutations drive cellular pathology in ALS and to identify convergent mechanisms between C9ORF72 and TARDBP mutations, we analyzed motor neurons (MNs) derived from induced pluripotent stem cells (iPSCs) from patients with ALS. C9ORF72 iPSC-MNs have higher Ca2+ release after depolarization, delayed recovery to baseline after glutamate stimulation, and lower levels of calbindin compared with CRISPR/Cas9 genome-edited controls. TARDBP iPS-derived MNs show high glutamate-induced Ca2+ release. We identify here, by RNA sequencing, that both C9ORF72 and TARDBP iPSC-MNs have upregulation of Ca2+-permeable AMPA and NMDA subunits and impairment of mitochondrial Ca2+ buffering due to an imbalance of MICU1 and MICU2 on the mitochondrial Ca2+ uniporter, indicating that impaired mitochondrial Ca2+ uptake contributes to glutamate excitotoxicity and is a shared feature of MNs with C9ORF72 or TARDBP mutations., Graphical Abstract, Highlights • Mutations in C9orf72 and TDP-43 reduce Ca2+ buffering capacity in ALS motor neurons • High levels of Ca2+-permeable glutamate receptors link C9orf72 and TDP-43 • Low mitochondrial Ca2+ uptake leads to glutamate-induced cell death • Imbalance of MICU1 and MICU2 reduces mitochondrial Ca2+ uptake, In this study, Dafinca, Talbot, and colleagues provide a mechanistic link between mutations in C9orf72 and TARDBP in induced pluripotent stem cell-derived motor neurons from ALS patients. They show both mutations cause increased expression of Ca2+-permeable receptors, reduced cytosolic Ca2+ buffering, and identify that perturbations in mitochondrial calcium uptake through an imbalance of MICU1 and MICU2 link the mutations.
- Published
- 2020
47. Regional callosal integrity and bilaterality of limb weakness in amyotrophic lateral sclerosis
- Author
-
Matthew C. Kiernan, Ricarda A. L. Menke, Sicong Tu, Martin R Turner, Kevin Talbot, Chenyu Wang, and Michael Barnett
- Subjects
congenital, hereditary, and neonatal diseases and abnormalities ,endocrine system ,Weakness ,Corpus callosum ,Corpus Callosum ,03 medical and health sciences ,0302 clinical medicine ,mental disorders ,medicine ,Humans ,Amyotrophic lateral sclerosis ,Pathological ,medicine.diagnostic_test ,business.industry ,Amyotrophic Lateral Sclerosis ,Magnetic resonance imaging ,Anatomy ,medicine.disease ,Magnetic Resonance Imaging ,White Matter ,nervous system diseases ,Diffusion Tensor Imaging ,nervous system ,Neurology ,Neurology (clinical) ,medicine.symptom ,business ,Motor neurone disease ,030217 neurology & neurosurgery ,Diffusion MRI - Abstract
Background and Objectives: The corpus callosum is a site of pathological involvement in the neurodegenerative disorder amyotrophic lateral sclerosis (ALS). The corpus callosum shows widespread cortical connectivity topographically distributed along its length. Initial limb weakness in ALS is typically unilateral, becoming bilateral with disease progression. The precise anatomical substrate for this spread is uncertain. The present study investigated sub-regional variations in corpus callosum integrity in ALS, and whether these reflect a relationship with the development of unilateral or bilateral limb weakness. Methods: Sporadic ALS patients were categorized into unilateral (n = 14) or bilateral (n = 25) limb weakness at the time of assessment and underwent diffusion tensor imaging. Probabilistic bundle-specific tracking was carried out using MRtrix and TractSeg to parcellate the corpus callosum into seven anatomical segments (rostrum; genu; rostral body; anterior midbody; posterior midbody; isthmus; splenium). White matter tract integrity was assessed in all segments and compared with MRI data acquired from 25 healthy controls. Results: In the combined patient group, the most prominent differences in diffusivity metrics were in the rostral body, posterior midbody and isthmus of the corpus callosum (p Conclusions: Corpus callosum involvement in ALS is detectable across multiple segments, in keeping with a widespread cortical distribution of pathology. The association of unilateral limb weakness with greater loss of corpus callosum integrity informs connectivity-based hypotheses of symptom propagation in ALS.
- Published
- 2020
48. Neurotrophic properties of C-terminal domain of the heavy chain of tetanus toxin on motor neuron diseases
- Author
-
Caty Casas, Mireia Herrando-Grabulosa, Kevin Talbot, and José Aguilera
- Subjects
MAPK/ERK pathway ,amyotrophic lateral sclerosis ,Health, Toxicology and Mutagenesis ,Excitotoxicity ,lcsh:Medicine ,Toxicology ,medicine.disease_cause ,Rats, Sprague-Dawley ,Tissue Culture Techniques ,Mice ,0302 clinical medicine ,Amyotrophic lateral sclerosis ,spinal muscular atrophy ,Motor Neurons ,0303 health sciences ,biology ,Recombinant Proteins ,Neuroprotection ,medicine.anatomical_structure ,Neuroprotective Agents ,Spinal Cord ,neuroprotection ,carboxyl-terminal domain of the heavy chain of tetanus toxin ,excitotoxicity ,Neurotrophin ,Signal Transduction ,Article ,Cell Line ,03 medical and health sciences ,Protein Domains ,Tetanus Toxin ,medicine ,Animals ,Carboxyl-terminal domain of the heavy chain of tetanus toxin ,PI3K/AKT/mTOR pathway ,030304 developmental biology ,lcsh:R ,Spinal muscular atrophy ,Motor neuron ,medicine.disease ,Peptide Fragments ,nervous system ,biology.protein ,Phosphatidylinositol 3-Kinase ,Neuroscience ,Proto-Oncogene Proteins c-akt ,030217 neurology & neurosurgery - Abstract
The carboxyl-terminal domain of the heavy chain of tetanus toxin (Hc-TeTx) exerts a neuroprotective effect in neurodegenerative diseases via the activation of signaling pathways related to neurotrophins, and also through inhibiting apoptotic cell death. Here, we demonstrate that Hc-TeTx preserves motoneurons from chronic excitotoxicity in an in vitro model of amyotrophic lateral sclerosis. Furthermore, we found that PI3-K/Akt pathway, but not p21ras/MAPK pathway, is involved in their beneficial effects under chronic excitotoxicity. Moreover, we corroborate the capacity of the Hc-TeTx to be transported retrogradely into the spinal motor neurons and also its capacity to bind to the motoneuron-like cell line NSC-34. These findings suggest a possible therapeutic tool to improve motoneuron preservation in neurodegenerative diseases such as amyotrophic lateral sclerosis.
- Published
- 2020
49. A proposal for new diagnostic criteria for ALS
- Author
-
Steven Vucic, Mamede de Carvalho, José Manuel Matamala, Neil G. Simon, Orla Hardiman, Robert D. Henderson, Matthew C. Kiernan, Liying Cui, Walter Paulus, Andrew Eisen, David Burke, Jeremy M. Shefner, Renato J. Verdugo, Hiroshi Mitsumoto, Michael Swash, Yoshikazu Ugawa, Leonard H. van den Berg, Mark R. Baker, Julian Grosskreutz, Kevin Talbot, Martin R Turner, Ammar Al-Chalabi, Ryuji Kaji, and Repositório da Universidade de Lisboa
- Subjects
Motor Neurons ,Electromyography ,Amyotrophic Lateral Sclerosis ,05 social sciences ,Library science ,Reference Standards ,050105 experimental psychology ,Sensory Systems ,3. Good health ,03 medical and health sciences ,0302 clinical medicine ,Neurology ,Physiology (medical) ,Political science ,Humans ,0501 psychology and cognitive sciences ,Neurology (clinical) ,Muscle, Skeletal ,License ,Reference standards ,030217 neurology & neurosurgery - Abstract
© 2020 The Authors. Published by Elsevier B.V. on behalf of International Federation of Clinical Neurophysiology. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/)., Sclerosis (ALS) were initially published in 1994 and revised in 2000. Criteria were established because the ‘‘variety of clinical features which may be present early in the course of ALS makes absolute diagnosis difficult and compromises the certainty of diagnosis for clinical research purposes and therapeutic trials.” The original criteria described 4 categories of disease: Definite, Probable, Possible, and Suspected ALS. However, subsequent clinical experience made it clear that non-Definite categories included patients who would ultimately die of ALS with a high degree of clinical certainty.
- Published
- 2020
50. Impaired corticomuscular and interhemispheric cortical beta oscillation coupling in amyotrophic lateral sclerosis
- Author
-
Andrew J. Quinn, Malcolm Proudfoot, Michael Benatar, Martin R Turner, Freek van Ede, Mark W. Woolrich, Giles L. Colclough, Joanne Wuu, Kevin Talbot, and Anna C. Nobre
- Subjects
Adult ,Male ,0301 basic medicine ,Asymptomatic ,03 medical and health sciences ,0302 clinical medicine ,Forearm ,Isometric Contraction ,Physiology (medical) ,Motor system ,medicine ,Humans ,Beta Rhythm ,Amyotrophic lateral sclerosis ,Aged ,Aged, 80 and over ,Hand Strength ,medicine.diagnostic_test ,business.industry ,Amyotrophic Lateral Sclerosis ,Motor Cortex ,Magnetoencephalography ,Middle Aged ,medicine.disease ,Sensory Systems ,Peripheral ,030104 developmental biology ,medicine.anatomical_structure ,Neurology ,Female ,Neurology (clinical) ,Primary motor cortex ,medicine.symptom ,business ,Neuroscience ,Photic Stimulation ,Psychomotor Performance ,030217 neurology & neurosurgery - Abstract
Objectives The neural activity of the primary motor cortex is variably synchronised with contralateral peripheral electromyographic signals, which is thought to facilitate long-range communication through the motor system. Such corticomuscular coherence (CMC) is typically observed in the beta-band (15–30 Hz) range during steady force production. We aimed to measure pathological alteration to CMC resulting from ALS. Methods CMC was appraised during a forearm grip task in 17 ALS patients contrasted against age-matched healthy controls. An exploratory comparison with a group of asymptomatic ALS gene carriers and neuropathy disease mimics was also undertaken. Neural signals were acquired by whole-head magnetoencephalography and localised via structural MRI to the motor cortices. Results During light voluntary muscular contraction, beta-band CMC was significantly reduced in ALS patients compared to healthy controls. Propagation of motoric beta rhythms across the cortical hemispheres was also shown to be impaired in ALS patients. CMC was preserved in the asymptomatic gene carrier and did not distinguish ALS patients from neuropathy mimics. Conclusion Functional connectivity metrics reveal an ALS-related decrease in both corticomuscular and interhemispheric communication during bilateral grip force production. Significance MEG-derived beta oscillation coupling may be a potential biomarker of motor system dysfunction in ALS, against which to measure future therapeutic efficacy.
- Published
- 2018
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.