149 results on '"Hana Sychrová"'
Search Results
2. Heterologous expression reveals unique properties of Trk K + importers from nonconventional biotechnologically relevant yeast species together with their potential to support Saccharomyces cerevisiae growth
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Klára Papoušková, Marcos Gómez, Marie Kodedová, José Ramos, Olga Zimmermannová, and Hana Sychrová
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Genetics ,Bioengineering ,Applied Microbiology and Biotechnology ,Biochemistry ,Biotechnology - Published
- 2022
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3. Heterologous expression reveals unique properties of Trk K
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Klára, Papoušková, Marcos, Gómez, Marie, Kodedová, José, Ramos, Olga, Zimmermannová, and Hana, Sychrová
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In the model yeast Saccharomyces cerevisiae, Trk1 is the main K
- Published
- 2022
4. Light-induced antifungal activity of nanoparticles with an encapsulated porphyrin photosensitizer
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Marie Kodedová, Vojtěch Liška, Jiří Mosinger, and Hana Sychrová
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Microbiology - Published
- 2023
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5. Squalene lipotoxicity in a lipid droplet‐less yeast mutant is linked to plasma membrane dysfunction
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Zsófia Csáky, Martin Valachovic, Marie Kodedová, Ivan Hapala, Hana Sychrová, and Martina Garaiova
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Squalene ,0106 biological sciences ,Cell Membrane Permeability ,Osmotic shock ,Squalene monooxygenase ,Bioengineering ,Saccharomyces cerevisiae ,Biology ,01 natural sciences ,Applied Microbiology and Biotechnology ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Triterpene ,010608 biotechnology ,Lipid droplet ,Genetics ,Terbinafine ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Rhodamines ,Cell Membrane ,Zaragozic acid ,Lipid Droplets ,Yeast ,chemistry ,Lipotoxicity ,Biotechnology - Abstract
Squalene is a naturally occurring triterpene with wide industrial applications. Due to limited natural resources, production of this valuable lipid in yeast is of high commercial relevance. Typically low levels of squalene in yeast can be significantly increased by specific cultivation conditions or genetic modifications. Under normal conditions, excess squalene is stored in lipid droplets (LD), while in a Saccharomyces cerevisiae mutant unable to form LD it is distributed to cellular membranes. We present here the evidence that squalene accumulation in this LD-less mutant treated with squalene monooxygenase inhibitor terbinafine induces growth defects and loss of viability. We show that plasma membrane malfunction is involved in squalene toxicity. We have found that subinhibitory concentrations of terbinafine increased the sensitivity of LD-less mutant to several membrane-active substances. Furthermore, squalene accumulation in terbinafine-treated LD-less cells disturbed the maintenance of membrane potential and increased plasma membrane permeability to rhodamine 6G. LD-less cells treated with terbinafine showed also high sensitivity to osmotic stress. To confirm the causal relationship between squalene accumulation, loss of viability and impaired plasma membrane functions we treated LD-less cells simultaneously with terbinafine and squalene synthase inhibitor zaragozic acid. Reduction of squalene levels by zaragozic acid improved cell growth and viability and decreased plasma membrane permeability to rhodamine 6G in terbinafine-treated LD-less cells. Our results support the hypothesis that plasma membrane malfunction is involved in the mechanisms of squalene lipotoxicity in yeast cells with defective lipid storage.
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- 2020
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6. A set of plasmids carrying antibiotic resistance markers and Cre recombinase for genetic engineering of nonconventional yeast Zygosaccharomyces rouxii
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Michala Dušková, Melissa Bizzarri, Lisa Solieri, Hana Sychrová, and Stefano Cassanelli
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Genetic Markers ,Auxotrophy ,Centromere ,Mutant ,Cre recombinase ,Bioengineering ,Locus (genetics) ,Biology ,Applied Microbiology and Biotechnology ,Biochemistry ,03 medical and health sciences ,Antibiotic resistance ,Plasmid ,Drug Resistance, Fungal ,Genetics ,030304 developmental biology ,0303 health sciences ,Integrases ,030306 microbiology ,Zygosaccharomyces ,Yeast ,Anti-Bacterial Agents ,Ploidy ,Genetic Engineering ,Plasmids ,Biotechnology - Abstract
The so-called nonconventional yeasts are becoming increasingly attractive in food and industrial biotechnology. Among them, Zygosaccharomyces rouxii is known to be halotolerant, osmotolerant, petite negative, and poorly Crabtree positive. These traits and the high fermentative vigour make this species very appealing for industrial and food applications. Nevertheless, the biotechnological exploitation of Z. rouxii has been biased by the low availability of genetic engineering tools and the recalcitrance of this yeast towards the most conventional transformation procedures. Centromeric and episomal Z. rouxii plasmids have been successfully constructed with prototrophic markers, which limited their usage to auxotrophic strains, mainly derived from the Z. rouxii haploid type strain Centraalbureau voor Schimmelcultures (CBS) 732T . By contrast, the majority of industrially promising Z. rouxii yeasts are prototrophic and allodiploid/aneuploid strains. In order to expand the genetic tools for manipulating these strains, we developed two centromeric and two episomal vectors harbouring KanMXR and ClonNATR as dominant drug resistance markers, respectively. We also constructed the plasmid pGRCRE that allows the Cre recombinase-mediated marker recycling during multiple gene deletions. As proof of concept, pGRCRE was successfully used to rescue the kanMX-loxP module in Z. rouxii ATCC 42981 G418-resistant mutants previously constructed by replacing the MATαP expression locus with the loxP-kanMX-loxP cassette.
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- 2019
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7. Erv14 cargo receptor participates in regulation of plasma-membrane potential, intracellular pH and potassium homeostasis via its interaction with K+-specific transporters Trk1 and Tok1
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Kristina Felcmanova, Omar Pantoja, Hana Sychrová, Olga Zimmermannova, Klara Papouskova, and Paul Rosas-Santiago
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Membrane potential ,0303 health sciences ,biology ,030306 microbiology ,Chemistry ,Endoplasmic reticulum ,Intracellular pH ,Vesicle ,Saccharomyces cerevisiae ,Cell Biology ,Hyperpolarization (biology) ,biology.organism_classification ,Cell biology ,03 medical and health sciences ,Cation homeostasis ,Molecular Biology ,Secretory pathway ,030304 developmental biology - Abstract
Cargo receptors in the endoplasmic reticulum (ER) recognize and help membrane and soluble proteins along the secretory pathway to reach their location and functional site. We characterized physiological properties of Saccharomyces cerevisiae strains lacking the ERV14 gene, which encodes a cargo receptor part of COPII-coated vesicles that cycles between the ER and Golgi membranes. The lack of Erv14 resulted in larger cell volume, plasma-membrane hyperpolarization, and intracellular pH decrease. Cells lacking ERV14 exhibited increased sensitivity to toxic cationic drugs and decreased ability to grow on low K+. We found no change in the localization of plasma membrane H+-ATPase Pma1, Na+, K+-ATPase Ena1 and K+ importer Trk2 or vacuolar K+-Cl− co-transporter Vhc1 in the absence of Erv14. However, Erv14 influenced the targeting of two K+-specific plasma-membrane transport systems, Tok1 (K+ channel) and Trk1 (K+ importer), that were retained in the ER in erv14Δ cells. The lack of Erv14 resulted in growth phenotypes related to a diminished amount of Trk1 and Tok1 proteins. We confirmed that Rb+ whole-cell uptake via Trk1 is not efficient in cells lacking Erv14. ScErv14 helped to target Trk1 homologues from other yeast species to the S. cerevisiae plasma membrane. The direct interaction between Erv14 and Tok1 or Trk1 was confirmed by co-immunoprecipitation and by a mating-based Split Ubiquitin System. In summary, our results identify Tok1 and Trk1 to be new cargoes for Erv14 and show this receptor to be an important player participating in the maintenance of several physiological parameters of yeast cells.
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- 2019
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8. Potassium uptake systems of <scp> Candida krusei </scp>
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Pavla Herynkova, Olga Zimmermannova, Hana Sychrová, and Hana Elicharová
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Saccharomyces cerevisiae ,Bioengineering ,Applied Microbiology and Biotechnology ,Biochemistry ,Fungal Proteins ,03 medical and health sciences ,Candida krusei ,Cation homeostasis ,Genetics ,Cation Transport Proteins ,Gene ,Phylogeny ,Candida ,030304 developmental biology ,0303 health sciences ,Ion Transport ,biology ,030306 microbiology ,Genetic Complementation Test ,Genetic Variation ,biology.organism_classification ,Recombinant Proteins ,Yeast ,Saccharomycetales ,Trk receptor ,Potassium ,Heterologous expression ,Genome, Fungal ,Biotechnology - Abstract
Candida krusei is a pathogenic yeast species that is phylogenetically outside both of the well-studied yeast groups, whole genome duplication and CUG. Like all other yeast species, it needs to accumulate high amounts of potassium cations, which are needed for proliferation and many other cell functions. A search in the sequenced genomes of nine C. krusei strains revealed the existence of two highly conserved genes encoding putative potassium uptake systems. Both of them belong to the TRK family, whose members have been found in all the sequenced genomes of species from the Saccharomycetales subclade. Analysis and comparison of the two C. krusei Trk sequences revealed all the typical features of yeast Trk proteins but also an unusual extension of the CkTrk2 hydrophilic N-terminus. The expression of both putative CkTRK genes in Saccharomyces cerevisiae lacking its own potassium importers showed that only CkTrk1 is able to complement the absence of S. cerevisiae's own transporters and provide cells with a sufficient amount of potassium. Interestingly, a portion of the CkTrk1 molecules were localized to the vacuolar membrane. The presence of CkTrk2 had no evident phenotype, due to the fact that this protein was not correctly targeted to the S. cerevisiae plasma membrane. Thus, CkTrk2 is the first studied yeast Trk protein to date that was not properly recognized and targeted to the plasma membrane upon heterologous expression in S. cerevisiae.
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- 2019
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9. Trk1-mediated potassium uptake contributes to cell-surface properties and virulence of Candida glabrata
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Per O. Ljungdahl, Vicent Llopis-Torregrosa, Kicki Ryman, Attila Gácser, Hana Sychrová, Ylva Engström, Concha Gil, Lucía Monteoliva, and Catarina Vaz
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0301 basic medicine ,Fungal infection ,THP-1 Cells ,Potassium ,lcsh:Medicine ,Candida glabrata ,Moths ,Microbiología ,Membrane Potentials ,Cell growth ,0302 clinical medicine ,Gene Expression Regulation, Fungal ,lcsh:Science ,Cation Transport Proteins ,Multidisciplinary ,Biología molecular ,biology ,Virulence ,Fungal genetics ,Cell biology ,Drosophila melanogaster ,Pathogens ,Hydrophobic and Hydrophilic Interactions ,Surface Properties ,Intracellular pH ,chemistry.chemical_element ,Article ,Cell Line ,03 medical and health sciences ,Potassium-Hydrogen Antiporters ,Cell Adhesion ,Animals ,Humans ,Ion Transport ,Macrophages ,Cell Membrane ,lcsh:R ,Biofilm ,Wild type ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,030104 developmental biology ,chemistry ,Cell culture ,Biofilms ,lcsh:Q ,030217 neurology & neurosurgery - Abstract
The absence of high-affinity potassium uptake in Candida glabrata, the consequence of the deletion of the TRK1 gene encoding the sole potassium-specific transporter, has a pleiotropic effect. Here, we show that in addition to changes in basic physiological parameters (e.g., membrane potential and intracellular pH) and decreased tolerance to various cell stresses, the loss of high affinity potassium uptake also alters cell-surface properties, such as an increased hydrophobicity and adherence capacity. The loss of an efficient potassium uptake system results in diminished virulence as assessed by two insect host models, Drosophila melanogaster and Galleria mellonella, and experiments with macrophages. Macrophages kill trk1Δ cells more effectively than wild type cells. Consistently, macrophages accrue less damage when co-cultured with trk1Δ mutant cells compared to wild-type cells. We further show that low levels of potassium in the environment increase the adherence of C. glabrata cells to polystyrene and the propensity of C. glabrata cells to form biofilms.
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- 2019
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10. Minority potassium-uptake system Trk2 has a crucial role in yeast survival of glucose-induced cell death
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Michala Dušková, Klara Papouskova, Hana Sychrová, Jakub Masaryk, and Denis Cmunt
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0303 health sciences ,Programmed cell death ,Microbial Viability ,Saccharomyces cerevisiae Proteins ,Cell Death ,biology ,030306 microbiology ,Potassium ,Saccharomyces cerevisiae ,chemistry.chemical_element ,Transporter ,biology.organism_classification ,Microbiology ,Yeast ,Cell biology ,03 medical and health sciences ,Glucose ,Downregulation and upregulation ,chemistry ,Trk receptor ,Cation Transport Proteins ,Intracellular ,030304 developmental biology - Abstract
The existence of programmed cell death in Saccharomyces cerevisiae has been reported for many years. Glucose induces the death of S. cerevisiae in the absence of additional nutrients within a few hours, and the absence of active potassium uptake makes cells highly sensitive to this process. S. cerevisiae cells possess two transporters, Trk1 and Trk2, which ensure a high intracellular concentration of potassium, necessary for many physiological processes. Trk1 is the major system responsible for potassium acquisition in growing and dividing cells. The contribution of Trk2 to potassium uptake in growing cells is almost negligible, but Trk2 becomes crucial for stationary cells for their survival of some stresses, e.g. anhydrobiosis. As a new finding, we show that both Trk systems contribute to the relative thermotolerance of S. cerevisiae BY4741. Our results also demonstrate that Trk2 is much more important for the cell survival of glucose-induced cell death than Trk1, and that stationary cells deficient in active potassium uptake lose their ATP stocks more rapidly than cells with functional Trk systems. This is probably due to the upregulated activity of plasma-membrane Pma1 H+-ATPase, and consequently, it is the reason why these cells die earlier than cells with functional active potassium uptake.
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- 2021
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11. K+-specific importers Trk1 and Trk2 play different roles in Ca2+ homeostasis and signalling in Saccharomyces cerevisiae cells
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Hana Sychrová, Anne-Sophie Colinet, Kristina Felcmanova, Lenka Sacka, Olga Zimmermannova, Pierre Morsomme, and UCL - SST/LIBST - Louvain Institute of Biomolecular Science and Technology
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Saccharomyces cerevisiae Proteins ,Osmotic shock ,chemistry.chemical_element ,Saccharomyces cerevisiae ,Biology ,Calcium ,yeast ,Applied Microbiology and Biotechnology ,Microbiology ,Potassium Chloride ,03 medical and health sciences ,Extracellular ,Homeostasis ,Cation Transport Proteins ,030304 developmental biology ,0303 health sciences ,calcium ,030306 microbiology ,potassium ,General Medicine ,Cell biology ,Cytosol ,chemistry ,Trk1 ,Cinnamates ,Calcium ion homeostasis ,Trk2 ,Potassium ,K+-transporter ,osmotic shock ,Hygromycin B ,Flux (metabolism) ,Intracellular ,Signal Transduction - Abstract
The maintenance of K+ and Ca2+ homeostasis is crucial for many cellular functions. Potassium is accumulated in cells at high concentrations, while the cytosolic level of calcium, to ensure its signalling function, is kept at low levels and transiently increases in response to stresses. We examined Ca2+ homeostasis and Ca2+ signalling in Saccharomyces cerevisiae strains lacking plasma-membrane K+ influx (Trk1 and Trk2) or efflux (Tok1, Nha1 and Ena1-5) systems. The lack of K+ exporters slightly increased the cytosolic Ca2+, but did not alter the Ca2+ tolerance or Ca2+-stress response. In contrast, the K+-importers Trk1 and Trk2 play important and distinct roles in the maintenance of Ca2+ homeostasis. The presence of Trk1 was vital mainly for the growth of cells in the presence of high extracellular Ca2+, whilst the lack of Trk2 doubled steady-state intracellular Ca2+ levels. The absence of both K+ importers highly increased the Ca2+ response to osmotic or CaCl2 stresses and altered the balance between Ca2+ flux from external media and intracellular compartments. In addition, we found Trk2 to be important for the tolerance to high KCl and hygromycin B in cells growing on minimal media. All the data describe new interconnections between potassium and calcium homeostasis in S. cerevisiae.
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- 2020
12. Styrylpyridinium Derivatives as New Potent Antifungal Drugs and Fluorescence Probes
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Rimantas Daugelavičius, Simona Vaitkienė, Marie Kodedová, and Hana Sychrová
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Microbiology (medical) ,vacuolar marker ,Antifungal drug ,lcsh:QR1-502 ,Candida glabrata ,yeast ,Microbiology ,lcsh:Microbiology ,03 medical and health sciences ,multidrug resistance ,medicine ,styrylpyridinium derivatives ,diS-C3(3) assay ,030304 developmental biology ,Original Research ,chemistry.chemical_classification ,0303 health sciences ,biology ,030306 microbiology ,Chemistry ,biology.organism_classification ,Yeast ,Multiple drug resistance ,Membrane ,Mechanism of action ,Biochemistry ,Azole ,Efflux ,medicine.symptom ,membrane potential - Abstract
The incidence of Candida glabrata infections increases every year due to its higher resistance to commonly used antifungal drugs. We characterized the antifungal mechanism of action of eight new styrylpyridinium derivatives, with various N-alkyl chains (-C6H13, -C8H17, -C10H21, -C12H25) and different substituents, on C. glabrata strains differing in their drug resistance due to the presence or absence of two major drug-efflux pumps. We found that the tested styrylpyridinium compounds affected the growth of C. glabrata cells in a compound- and strain-dependent manner, and apparently they were substrates of CgCdr1 and CgCdr2 pumps. Further, we determined the impact of the tested compounds on plasma membrane integrity. The ability to cause damage to a plasma membrane depended on the compound, its concentration and the presence of efflux pumps, and corresponded well with the results of growth and survival tests. We also tested possible synergism with three types of known antifungal drugs. Though we did not observe any synergism with azole drugs, styrylpyridinium compounds 5 and 6 together with FK506 demonstrated excellent antifungal properties, whereas compounds 2, 3, 5, and 6 exhibited a significant synergistic effect in combination with terbinafine. Based on our results, derivatives 2 and 6 turned out to be the most promising antifungal drugs. Moreover, compound 6 was not only able to effectively permeabilize the yeast plasma membrane, but also exhibited significant synergism with FK506 and terbinafine. Finally, we also characterized the spectroscopic properties of the tested styrylpyridinium compounds. We measured their absorption and fluorescence spectra, determined their localization in yeast cells and found that their fluorescence characteristics differ from the properties of current commercial vacuolar styrylpyridinium markers and allow multi-color staining. Compounds 1, 3, 7, and 8 were able to accumulate in plasma and vacuolar membranes, and compounds 2, 5, and 6 stained the whole interior of dead cells. In summary, of the eight tested compounds, compound 6 is the most promising antifungal drug, compound 8, due to its minimal toxicity, is the best candidate for a new vacuolar-membrane probe or new benchmark substrate of C. glabrata Cdr pumps, and derivative 5 for a new vital dye.
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- 2020
13. C5 conserved region of hydrophilic C-terminal part of Saccharomyces cerevisiae Nha1 antiporter determines its requirement of Erv14 COPII cargo receptor for plasma-membrane targeting
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Gal Masrati, Michaela Moravcova, Klara Papouskova, Hana Sychrová, Olga Zimmermannova, and Nir Ben-Tal
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Saccharomyces cerevisiae Proteins ,Antiporter ,Saccharomyces cerevisiae ,Endoplasmic Reticulum ,Microbiology ,Antiporters ,Conserved sequence ,03 medical and health sciences ,Molecular Biology ,COPII ,Cation Transport Proteins ,030304 developmental biology ,0303 health sciences ,biology ,030306 microbiology ,Vesicle ,Cell Membrane ,Sodium ,Membrane Proteins ,biology.organism_classification ,Yeast ,Cell biology ,Protein Transport ,Membrane protein ,COP-Coated Vesicles - Abstract
Erv14, a conserved cargo receptor of COPII vesicles, helps the proper trafficking of many but not all transporters to the yeast plasma membrane, for example, three out of five alkali-metal-cation transporters in Saccharomyces cerevisiae. Among them, the Nha1 cation/proton antiporter, which participates in cell cation and pH homeostasis, is a large membrane protein (985 aa) possessing a long hydrophilic C-terminus (552 aa) containing six conserved regions (C1-C6) with unknown function. A short Nha1 version, lacking almost the entire C-terminus, still binds to Erv14 but does not need it to be targeted to the plasma membrane. Comparing the localization and function of ScNha1 variants shortened at its C-terminus in cells with or without Erv14 reveals that only ScNha1 versions possessing the complete C5 region are dependent on Erv14. In addition, our broad evolutionary conservation analysis of fungal Na+ /H+ antiporters identified new conserved regions in their C-termini, and our experiments newly show C5 and other, so far unknown, regions of the C-terminus, to be involved in the functionality and substrate specificity of ScNha1. Taken together, our results reveal that also relatively small hydrophilic parts of some yeast membrane proteins underlie their need to interact with the Erv14 cargo receptor.
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- 2020
14. Expression of heterologous transporters in Saccharomyces kudriavzevii: A strategy for improving yeast salt tolerance and fermentation performance
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Amparo Querol, Javier Alonso-del-Real, Hana Dibalova-Culakova, and Hana Sychrová
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Glycerol ,0301 basic medicine ,Osmotic shock ,030106 microbiology ,Heterologous ,Fructose ,Microbiology ,Saccharomyces ,03 medical and health sciences ,chemistry.chemical_compound ,Yeast, Dried ,Osmotic Pressure ,Cation Transport Proteins ,Ion Transport ,biology ,Transporter ,Salt Tolerance ,General Medicine ,biology.organism_classification ,Yeast ,chemistry ,Biochemistry ,Fermentation ,Saccharomyces kudriavzevii ,Food Science - Abstract
S. kudriavzevii has potential for fermentations and other biotechnological applications, but is sensitive to many types of stress. We tried to increase its tolerance and performance via the expression of various transporters from different yeast species. Whereas the overexpression of Z. rouxii fructose uptake systems (ZrFfz1 and ZrFsy1) or a glycerol importer (ZrStl1) did not improve the ability of S. kudriavzevii to consume fructose and survive osmotic stress, the expression of alkali-metal-cation exporters (ScEna1, ScNha1, YlNha2) improved S. kudriavzevii salt tolerance, and that of ScNha1 also the fermentation performance. The level of improvement depended on the type and activity of the transporter suggesting that the natural sensitivity of S. kudriavzevii cells to salts is based on a non-optimal functioning of its own transporters.
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- 2018
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15. Pedagogika a pedagogové
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Eva Vyskočilová, Eva Opavilová, Jan Patočka, Hana Sychrová, Jiří Kryšárek, Jaromír Kopecký, Jan Souček, Vlastimil Pařízek, Zdeněk Holubář, Radim Palouš, František Singule, František Jiránek, and Jiří Kotásek
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Education - Published
- 2018
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16. Immobilization in polyvinyl alcohol hydrogel enhances yeast storage stability and reusability of recombinant laccase-producing S. cerevisiae
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Jana Zemančíková, Klára Herkommerová, Hana Sychrová, and Zuzana Antosova
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0106 biological sciences ,0301 basic medicine ,Preservation, Biological ,Saccharomyces cerevisiae ,Cell Culture Techniques ,Bioengineering ,01 natural sciences ,Applied Microbiology and Biotechnology ,Polyvinyl alcohol ,03 medical and health sciences ,chemistry.chemical_compound ,010608 biotechnology ,Debaryomyces hansenii ,Equipment Reuse ,Viability assay ,Food science ,Laccase ,Microbial Viability ,biology ,Chemistry ,Yarrowia ,General Medicine ,Cells, Immobilized ,biology.organism_classification ,Recombinant Proteins ,Yeast ,Enzyme assay ,030104 developmental biology ,Polyvinyl Alcohol ,biology.protein ,Biotechnology - Abstract
To improve the storage stability and reusability of various yeast strains and species by immobilization in polyvinyl alcohol (PVA) hydrogel particles. Debaryomyces hansenii, Pichia sorbitophila, Saccharomyces cerevisiae, Yarrowia lipolytica, and Zygosaccharomyces rouxii were immobilized in PVA particles using LentiKats technology and stored in sterile water at 4 °C. The immobilization improved the survival of all species; however, the highest storage stability was achieved for S. cerevisiae and Y. lipolytica which survived more than 1 year, in contrast to free cells that survived for only 3 months. Tests of the reusability of immobilized recombinant laccase-secreting S. cerevisiae revealed that the cells were suitable for repetitive use (55 cycles during 15 months) even after storage in water at 4 °C for 9 months. A suitable method for killing immobilized laccase-secreting cells without affecting the produced enzyme activity was also developed. The immobilization of yeasts in PVA hydrogel enables long-term, cheap storage with very good cell viability and productivity, thus becoming a promising approach for industrial applications.
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- 2017
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17. Synthetic antimicrobial peptides of the halictines family disturb the membrane integrity of Candida cells
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Hana Sychrová and Marie Kodedová
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0301 basic medicine ,Antifungal Agents ,Pyridines ,Membrane lipids ,030106 microbiology ,Antimicrobial peptides ,Biophysics ,Peptide ,Microbial Sensitivity Tests ,Naphthalenes ,Biology ,Biochemistry ,Microbiology ,Fatty Acids, Monounsaturated ,Cell membrane ,03 medical and health sciences ,chemistry.chemical_compound ,Anti-Infective Agents ,Amphotericin B ,Myriocin ,medicine ,Fluconazole ,Terbinafine ,Candida ,chemistry.chemical_classification ,Cell Membrane ,Cell Biology ,Antimicrobial ,Lipids ,Sterols ,Cytosol ,030104 developmental biology ,medicine.anatomical_structure ,chemistry ,Imines ,Peptides ,Octenidine dihydrochloride - Abstract
We compared the potency of four derivatives of the antimicrobial peptide halictine-2 against six Candida species. Observed activity was peptide and species specific. Halictines rapidly permeabilized cell membranes and caused the leakage of cytosolic components. Their killing potential was enhanced by the commercial antimicrobial agent octenidine dihydrochloride. The effect on C. glabrata cells did not depend on the activity of Cdr pumps, but was influenced by their lipid composition. The pre-treatment of cells with myriocin, an inhibitor of sphingolipid synthesis, enhanced the peptides' activity, whereas pre-treatment with terbinafine and fluconazole, inhibitors of sterol synthesis, significantly weakened their efficacy. The killing efficacy of peptides increased in combination with amphotericin B. Thus the mode of action of halictines is likely to depend on the plasma-membrane sterols, which might explain the observed differences among the tested Candida species.
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- 2017
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18. A new pH sensor localized in the Golgi apparatus of Saccharomyces cerevisiae reveals unexpected roles of Vph1p and Stv1p isoforms
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Olga Zimmermannova, Pierre Morsomme, Antoine Deschamps, Anne-Sophie Colinet, Hana Sychrová, and UCL - SST/LIBST - Louvain Institute of Biomolecular Science and Technology
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0301 basic medicine ,Gene isoform ,Vacuolar Proton-Translocating ATPases ,Saccharomyces cerevisiae Proteins ,Saccharomyces cerevisiae ,Ph control ,Golgi Apparatus ,lcsh:Medicine ,Biosensing Techniques ,Microbiology ,Article ,03 medical and health sciences ,symbols.namesake ,Golgi ,lcsh:Science ,Sensors and probes ,Secretory pathway ,Organelles ,Multidisciplinary ,030102 biochemistry & molecular biology ,biology ,Chemistry ,lcsh:R ,Fungi ,Wild type ,Chemical Engineering ,Hydrogen-Ion Concentration ,Golgi apparatus ,biology.organism_classification ,Cell biology ,Isoenzymes ,Cytosol ,030104 developmental biology ,symbols ,lcsh:Q ,Lumen (unit) - Abstract
The gradual acidification of the secretory pathway is conserved and extremely important for eukaryotic cells, but until now there was no pH sensor available to monitor the pH of the early Golgi apparatus in Saccharomyces cerevisiae. Therefore, we developed a pHluorin-based sensor for in vivo measurements in the lumen of the Golgi. By using this new tool we show that the cis- and medial-Golgi pH is equal to 6.6–6.7 in wild type cells during exponential phase. As expected, V-ATPase inactivation results in a near neutral Golgi pH. We also uncover that surprisingly Vph1p isoform of the V-ATPase is prevalent to Stv1p for Golgi acidification. Additionally, we observe that during changes of the cytosolic pH, the Golgi pH is kept relatively stable, mainly thanks to the V-ATPase. Eventually, this new probe will allow to better understand the mechanisms involved in the acidification and the pH control within the secretory pathway.
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- 2020
19. Nuclear magnetic resonance investigation of water transport through the plasma membrane of various yeast species
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Hana Elicharová, Pavel Srb, Mária Šoltésová, Michal Růžička, Larisa Janisova, Jan Lang, and Hana Sychrová
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Magnetic Resonance Spectroscopy ,Membrane permeability ,Osmotic shock ,Saccharomyces cerevisiae ,Aquaporins ,Osmosis ,Microbiology ,03 medical and health sciences ,Nuclear magnetic resonance ,Candida albicans ,Schizosaccharomyces ,Genetics ,Molecular Biology ,030304 developmental biology ,0303 health sciences ,Water transport ,biology ,030306 microbiology ,Chemistry ,Cell Membrane ,Temperature ,Zygosaccharomyces ,Water ,Biological Transport ,Nuclear magnetic resonance spectroscopy ,biology.organism_classification ,Yeast ,Kinetics ,Membrane ,Thermodynamics - Abstract
A specific technique of nuclear magnetic resonance (NMR) spectroscopy, filter-exchange spectroscopy (FEXSY), was employed to investigate water transport through the plasma membrane in intact yeast cells. This technique allows water transport to be monitored directly, thus avoiding the necessity to subject the cells to any rapid change in the external conditions, e.g. osmotic shock. We established a sample preparation protocol, a data analysis procedure and verified the applicability of FEXSY experiments. We recorded the exchange rates in the temperature range 10–40°C for Saccharomyces cerevisiae. The resulting activation energy of 29 kJ mol−1 supports the hypothesis that water exchange is facilitated by water channels—aquaporins. Furthermore, we measured for the first time water exchange rates in three other phylogenetically unrelated yeast species (Schizosaccharomyces pombe, Candida albicans and Zygosaccharomyces rouxii) and observed remarkably different water exchange rates between these species. Findings of our work contribute to a better understanding of as fundamental a cell process as the control of water transport through the plasma membrane.
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- 2019
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20. Variations in yeast plasma‐membrane lipid composition affect killing activity of three families of insect antifungal peptides
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Zsófia Csáky, Marie Kodedová, Hana Sychrová, and Martin Valachovic
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Antifungal Agents ,Insecta ,Membrane lipids ,Immunology ,Antimicrobial peptides ,Microbial Sensitivity Tests ,Saccharomyces cerevisiae ,Biology ,Microbiology ,Membrane Lipids ,03 medical and health sciences ,chemistry.chemical_compound ,Drug Resistance, Fungal ,Ergosterol ,Virology ,Cardiolipin ,Animals ,Lipid raft ,Candida ,030304 developmental biology ,Phosphatidylethanolamine ,0303 health sciences ,030306 microbiology ,Cell Membrane ,Phosphatidic acid ,Yeast ,Bee Venoms ,chemistry ,Biochemistry ,lipids (amino acids, peptides, and proteins) ,Peptides - Abstract
Naturally occurring antimicrobial peptides and their synthetic analogues are promising candidates for new antifungal drugs. We focused on three groups of peptides isolated from the venom of bees and their synthetic analogues (lasioglossins, halictines and hylanines), which all rapidly permeabilised the plasma membrane. We compared peptides' potency against six pathogenic Candida species (C. albicans, C. glabrata, C. parapsilosis, C. tropicalis, C. krusei and C. dubliniensis) and the non-pathogenic model yeast Saccharomyces cerevisiae. Their activity was independent of the presence of the multidrug-resistant pumps of C. glabrata but was influenced by the lipid composition of cell plasma membranes. Although the direct interaction of the peptides with ergosterol was negligible in comparison with amphotericin B, the diminished ergosterol content after terbinafine pretreatment resulted in an increased resistance of C. glabrata to the peptides. The tested peptides strongly interacted with phosphatidylglycerol, phosphatidic acid and cardiolipin and partly with phosphatidylinositol and phosphatidylethanolamine. The interactions between predominantly anionic phospholipids and cationic peptides indicated a mainly electrostatic binding of peptides to the membranes. The results obtained also pointed to a considerable role of the components of lipid rafts (composed from sphingolipids and ergosterol) in the interaction of yeast cells with the peptides.
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- 2019
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21. Trk1, the sole potassium-specific transporter in Candida glabrata, contributes to the proper functioning of various cell processes
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Jan Bieber, Hana Sychrová, José Ramos, Francisco J. Ruiz-Castilla, Carmen Michán, and Gabriel Caro
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0106 biological sciences ,Physiology ,Intracellular pH ,Potassium ,Saccharomyces cerevisiae ,chemistry.chemical_element ,Candida glabrata ,01 natural sciences ,Applied Microbiology and Biotechnology ,Fungal Proteins ,03 medical and health sciences ,Gene Expression Regulation, Fungal ,010608 biotechnology ,Homeostasis ,Cation Transport Proteins ,Membrane potential ,0303 health sciences ,biology ,030306 microbiology ,Cell Membrane ,Sodium ,Transporter ,General Medicine ,Hydrogen-Ion Concentration ,biology.organism_classification ,Yeast ,Biochemistry ,chemistry ,Biotechnology - Abstract
Candida glabrata is a haploid yeast that is considered to be an emergent pathogen since it is the second most prevalent cause of candidiasis. Contrary to most yeasts, this species carries only one plasma membrane potassium transporter named CgTrk1. We show in this work that the activity of this transporter is regulated at the posttranslational level, and thus Trk1 contributes to potassium uptake under very different external cation concentrations. In addition to its function in potassium uptake, we report a diversity of physiological effects related to this transporter. CgTRK1 contributes to proper cell size, intracellular pH and membrane-potential homeostasis when expressed in Saccharomyces cerevisiae. Moreover, lithium influx experiments performed both in C. glabrata and S. cerevisiae indicate that the salt tolerance phenotype linked to CgTrk1 can be related to a high capacity to discriminate between potassium and lithium (or sodium) during the transport process. In summary, we show that CgTRK1 exerts a diversity of pleiotropic physiological roles and we propose that the corresponding protein may be an attractive pharmacological target for the development of new antifungal drugs.
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- 2019
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22. Regulation and activity of CaTrk1, CaAcu1 and CaHak1, the three plasma membrane potassium transporters in Candida albicans
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José Ramos, Francisco J. Ruiz-Castilla, Hana Sychrová, Gabriel Caro, Jan Bieber, and Carmen Michán
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Intracellular pH ,Potassium ,Saccharomyces cerevisiae ,Biophysics ,chemistry.chemical_element ,Biochemistry ,Fungal Proteins ,03 medical and health sciences ,Candida albicans ,Humans ,Cation Transport Proteins ,030304 developmental biology ,Membrane potential ,0303 health sciences ,biology ,030306 microbiology ,Chemistry ,Cell Membrane ,Transporter ,Cell Biology ,biology.organism_classification ,Heterologous expression ,Cation transport - Abstract
Wild-type cells of Candida albicans, the most common human fungal pathogen, are able to grow at very low micromolar concentrations of potassium in the external milieu. One of the reasons behind that behaviour is the existence of three different types of K+ transporters in their plasma membrane: Trk1, Acu1 and Hak1. This work shows that the transporters are very differently regulated at the transcriptional level upon exposure to saline stress, pH alterations or K+ starvation. We propose that different transporters take the lead in the diverse environmental conditions, Trk1 being the “house-keeping” one, and Acu1/Hak1 dominating upon K+ limiting conditions. Heterologous expression of the genes coding for the three transporters in a Saccharomyces cerevisiae strain lacking its endogenous potassium transporters showed that all of them mediated cation transport but with very different efficiencies. Moreover, expression of the transporters in S. cerevisiae also affected other physiological characteristics such as sodium and lithium tolerance, membrane potential or intracellular pH, being, in general, CaTrk1 the most effective in keeping these parameters close to the usual wild-type physiological levels.
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- 2021
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23. Interplay of Chimeric Mating-Type Loci Impairs Fertility Rescue and Accounts for Intra-Strain Variability in Zygosaccharomyces rouxii Interspecies Hybrid ATCC42981
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Melissa Bizzarri, Michala Dušková, Stefano Cassanelli, Hana Sychrová, Laura Bartolini, Leszek P. Pryszcz, and Lisa Solieri
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0301 basic medicine ,Mating type ,lcsh:QH426-470 ,Gene redundancy ,MinION ,Locus (genetics) ,yeast ,Biology ,Genome ,sexual cycle ,Loss of heterozygosity ,chimeric loci ,03 medical and health sciences ,0302 clinical medicine ,mating-type ,Gene duplication ,Genetics ,Allele ,Gene ,Genetics (clinical) ,Original Research ,Zygosaccharomyces ,Frontiers in Genetics ,lcsh:Genetics ,030104 developmental biology ,030220 oncology & carcinogenesis ,Molecular Medicine ,interspecies hybridization - Abstract
The pre-whole genome duplication (WGD) Zygosaccharomyces clade comprises several allodiploid strain/species with industrially interesting traits. The salt-tolerant yeast ATCC42981 is a sterile and allodiploid strain which contains two subgenomes, one of them resembling the haploid parental species Z. rouxii. Recently, different mating-type-like (MTL) loci repertoires were reported for ATCC42981 and the Japanese strain JCM22060, which are considered two stocks of the same strain. MTL reconstruction by direct sequencing approach is challenging due to gene redundancy, structure complexities, and allodiploid nature of ATCC42981. Here, DBG2OLC and MaSuRCA hybrid de novo assemblies of ONT and Illumina reads were combined with in vitro long PCR to definitively solve these incongruences. ATCC42981 exhibits several chimeric MTL loci resulting from reciprocal translocation between parental haplotypes and retains two MATa/MATα expression loci, in contrast to MATα in JCM22060. Consistently to these reconstructions, JCM22060, but not ATCC42981, undergoes mating and meiosis. To ascertain whether the damage of one allele at the MAT locus regains the complete sexual cycle in ATCC42981, we removed the MATα expressed locus by gene deletion. The resulting MATa/- hemizygous mutants did not show any evidence of sporulation, as well as of self- and out-crossing fertility, probably because incomplete silencing at the chimeric HMLα cassette masks the loss of heterozygosity at the MAT locus. We also found that MATα deletion switched off a2 transcription, an activator of a-specific genes in pre-WGD species. These findings suggest that regulatory scheme of cell identity needs to be further investigated in Z. rouxii protoploid yeast.
- Published
- 2019
24. Genomewide elucidation of drug resistance mechanisms for systemically used antifungal drugs amphotericin B, caspofungin, and voriconazole in the budding yeast
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Cigdem Balkan, Ilkcan Ercan, Ahmet Koc, Muhammed Dundar, Orhan Balcioglu, Esra Sahin Akdeniz, Marie Kodedová, Olga Zimmermannova, Esin Isik, Hana Sychrová, Balkan, Çiğdem, Ercan, İlkcan, Işık, Esin, Akdeniz, Esra Şahin, Balcıoğlu, Orhan, Koç, Ahmet, and Izmir Institute of Technology. Molecular Biology and Genetics
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Antifungal Agents ,Saccharomyces cerevisiae Proteins ,Antifungal drug ,Drug resistance ,Microbial Sensitivity Tests ,Saccharomyces cerevisiae ,Multidrug resistance ,Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,Mechanisms of Resistance ,Drug Resistance, Fungal ,Caspofungin ,Amphotericin B ,Candida albicans ,medicine ,Pharmacology (medical) ,Gene ,Antifungal agents ,030304 developmental biology ,Pharmacology ,Voriconazole ,0303 health sciences ,biology ,030306 microbiology ,Genomics ,biology.organism_classification ,Multiple drug resistance ,Infectious Diseases ,chemistry ,Saccharomycetales ,medicine.drug - Abstract
PubMed: 31209012, There are only a few antifungal drugs used systemically in treatment, and invasive fungal infections that are resistant to these drugs are an emerging problem in health care. In this study, we performed a high-copy-number genomic DNA (gDNA) library screening to find and characterize genes that reduce susceptibility to amphotericin B, caspofungin, and voriconazole in Saccharomyces cerevisiae. We identified the PDR16 and PMP3 genes for amphotericin B, the RMD9 and SWH1 genes for caspofungin, and the MRS3 and TRI1 genes for voriconazole. The deletion mutants for PDR16 and PMP3 were drug susceptible, but the other mutants had no apparent susceptibility. Quantitative-PCR analyses suggested that the corresponding drugs upregulated expression of the PDR16, PMP3, SWH1, and MRS3 genes. To further characterize these genes, we also profiled the global expression patterns of the cells after treatment with the antifungals and determined the genes and paths that were up-or downregulated. We also cloned Candida albicans homologs of the PDR16, PMP3, MRS3, and TRI1 genes and expressed them in S. cerevisiae. Heterologous expression of Candida homologs also provided reduced drug susceptibility to the budding yeast cells. Our analyses suggest the involvement of new genes in antifungal drug resistance.
- Published
- 2019
25. Erv14 cargo receptor participates in regulation of plasma-membrane potential, intracellular pH and potassium homeostasis via its interaction with K
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Olga, Zimmermannová, Kristina, Felcmanová, Paul, Rosas-Santiago, Klára, Papoušková, Omar, Pantoja, and Hana, Sychrová
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Potassium Channels ,Saccharomyces cerevisiae Proteins ,Cell Membrane ,Sodium ,Golgi Apparatus ,Membrane Proteins ,Biological Transport ,Saccharomyces cerevisiae ,Hydrogen-Ion Concentration ,Endoplasmic Reticulum ,Membrane Potentials ,Proton-Translocating ATPases ,Glucose ,Gene Expression Regulation, Fungal ,Potassium ,Homeostasis ,COP-Coated Vesicles ,Sodium-Potassium-Exchanging ATPase ,Transcriptome ,Cation Transport Proteins ,Gene Deletion ,Cell Size - Abstract
Cargo receptors in the endoplasmic reticulum (ER) recognize and help membrane and soluble proteins along the secretory pathway to reach their location and functional site. We characterized physiological properties of Saccharomyces cerevisiae strains lacking the ERV14 gene, which encodes a cargo receptor part of COPII-coated vesicles that cycles between the ER and Golgi membranes. The lack of Erv14 resulted in larger cell volume, plasma-membrane hyperpolarization, and intracellular pH decrease. Cells lacking ERV14 exhibited increased sensitivity to toxic cationic drugs and decreased ability to grow on low K
- Published
- 2018
26. Monovalent cation transporters at the plasma membrane in yeasts
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Hana Sychrová, Joaquín Ariño, and José Ramos
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Potassium Channels ,Saccharomyces cerevisiae Proteins ,Sodium-Hydrogen Exchangers ,ATPase ,Sodium ,Saccharomyces cerevisiae ,chemistry.chemical_element ,Bioengineering ,Vacuole ,Applied Microbiology and Biotechnology ,Biochemistry ,03 medical and health sciences ,Gene Expression Regulation, Fungal ,Cation homeostasis ,Genetics ,Homeostasis ,Cation Transport Proteins ,030304 developmental biology ,0303 health sciences ,Ion Transport ,biology ,030306 microbiology ,Cell Membrane ,Cations, Monovalent ,biology.organism_classification ,Proton-Translocating ATPases ,Membrane ,chemistry ,biology.protein ,Biophysics ,Potassium ,Efflux ,Sodium-Potassium-Exchanging ATPase ,Intracellular ,Biotechnology - Abstract
Maintenance of proper intracellular concentrations of monovalent cations, mainly sodium and potassium, is a requirement for survival of any cell. In the budding yeast Saccharomyces cerevisiae, monovalent cation homeostasis is determined by the active extrusion of protons through the Pma1 H+ -ATPase (reviewed in another chapter of this issue), the influx and efflux of these cations through the plasma membrane transporters (reviewed in this chapter), and the sequestration of toxic cations into the vacuoles. Here, we will describe the structure, function, and regulation of the plasma membrane transporters Trk1, Trk2, Tok1, Nha1, and Ena1, which play a key role in maintaining physiological intracellular concentrations of Na+ , K+ , and H+ , both under normal growth conditions and in response to stress.
- Published
- 2018
27. Stl1 transporter mediating the uptake of glycerol is not a weak point of Saccharomyces kudriavzevii's low osmotolerance
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Roberto Pérez-Torrado, Hana Sychrová, Klara Papouskova, Amparo Querol, and Jana Zemančíková
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0106 biological sciences ,Glycerol ,Saccharomyces cerevisiae Proteins ,Osmotic shock ,Intracellular pH ,Saccharomyces cerevisiae ,Mutant ,01 natural sciences ,Applied Microbiology and Biotechnology ,03 medical and health sciences ,chemistry.chemical_compound ,Osmotic Pressure ,Stress, Physiological ,010608 biotechnology ,0303 health sciences ,Growth medium ,biology ,030306 microbiology ,Chemistry ,Cell Membrane ,Membrane Transport Proteins ,Biological Transport ,biology.organism_classification ,Yeast ,Biochemistry ,Fermentation ,Mitogen-Activated Protein Kinases ,Saccharomyces kudriavzevii ,Gene Deletion - Abstract
Saccharomyces kudriavzevii is a nonconventional and rather osmosensitive yeast with a high potential of use in fermentation processes. To elucidate the basis of its relative osmosensitivity, the role of the STL1 gene encoding a putative glycerol uptake system was studied. Under higher osmotic pressure, the addition of a low amount of glycerol to the growth medium improved the growth of S. kudriavzevii and the expression of the STL1 gene was highly induced. Deletion of this gene decreased the strain's ability to grow in the presence of higher concentrations of salts and other solutes. Moreover, the mutant had a disturbed homeostasis of intracellular pH. Expression of the SkSTL1 gene in Saccharomyces cerevisiae complemented the osmosensitivity of the S. cerevisiae hog1Δ stl1Δ mutant, and the gene's tagging with GFP localized its product to the plasma membrane. Altogether, a deficiency in glycerol uptake did not seem to be the reason for S. kudriavzevii's low osmotolerance; its Stl1 transporter properly contributes to the regulation of intracellular pH and is crucial to its survival of osmotic stress. SIGNIFICANCE AND IMPACT OF THE STUDY: An increasing demand for food products with benefits for human health turns the attention to less-exploited nonconventional yeasts with interesting traits not found in Saccharomyces cerevisiae. Among them, Saccharomyces kudriavzevii has good potential for aroma-compound production, fermentations and other biotechnological applications, but it is less adapted to stressful industrial conditions. This report studied S. kudriavzevii relative osmosensitivity and its capacity for active glycerol uptake. The results obtained (on the activity and physiological function of S. kudriavzevii glycerol transporter) may contribute to a further engineering of this species aiming to improve its osmotolerance.
- Published
- 2018
28. Erv14 cargo receptor participates in yeast salt tolerance via its interaction with the plasma-membrane Nha1 cation/proton antiporter
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Rosario Vera-Estrella, Paul Rosas-Santiago, Omar Pantoja, Olga Zimmermannova, and Hana Sychrová
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0301 basic medicine ,Saccharomyces cerevisiae Proteins ,Sodium-Hydrogen Exchangers ,Antiporter ,Recombinant Fusion Proteins ,Biophysics ,Saccharomyces cerevisiae ,Biology ,Sodium Chloride ,Biochemistry ,Protein Structure, Secondary ,03 medical and health sciences ,Salt-tolerance ,Gene Expression Regulation, Fungal ,Cation homeostasis ,Nha1p ,Protein Interaction Domains and Motifs ,Cation Transport Proteins ,Erv14p ,Endoplasmic reticulum ,Membrane Proteins ,Biological Transport ,Salt Tolerance ,Cell Biology ,Cations, Monovalent ,Transmembrane protein ,Yeast ,Transport protein ,Cell biology ,Protein–protein interaction ,Sodium–hydrogen antiporter ,030104 developmental biology ,Membrane protein ,Potassium ,Protein Multimerization ,Protons ,Mislocalization ,Intracellular ,Protein Binding - Abstract
The yeast Nha1p Na(+), K(+)/H(+) antiporter has a house-keeping role in pH and cation homeostasis. It is also needed to alleviate excess Na(+) or K(+) from the cytoplasm under high external concentrations of these cations. Erv14p, a putative cargo receptor for transmembrane proteins is required for trafficking of Nha1p from the endoplasmic reticulum to the plasma membrane. Sensitivity to high Na(+) concentrations of the erv14 mutant associated to the intracellular mislocalization of Nha1p-GFP, together with a lower Na(+) efflux, indicate the involvement of this mutual association to accomplish the survival of the yeast cell upon sodium stress. This observation is supported by the protein-protein interaction between Erv14p and Nha1p detected by the mating-based Split Ubiquitin System and co-immunoprecipitation assays. Our results indicate that even though Erv14p interacts with Nha1p through the TMD, the C-terminal is important not only for the efficient delivery of Nha1p to the plasma membrane but also for its dimerization to accomplish its role in yeast salt tolerance.
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- 2016
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29. Identification of rice cornichon as a possible cargo receptor for the Golgi-localized sodium transporter OsHKT1;3
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Omar Pantoja, Olga Zimmermannova, Alexander M. Jones, Bronwyn J. Barkla, Hana Sychrová, Daniel Lagunas-Gómez, Wolf B. Frommer, Rosario Vera-Estrella, Paul Rosas-Santiago, and Sylvie Lalonde
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Physiology ,Xenopus ,Molecular Sequence Data ,Golgi Apparatus ,Plant Science ,Biology ,Cornichon ,Endoplasmic Reticulum ,protein–protein interaction ,Bimolecular fluorescence complementation ,symbols.namesake ,Sequence Analysis, Protein ,Protein Interaction Mapping ,Golgi ,Animals ,Amino Acid Sequence ,COPII ,Integral membrane protein ,Cation Transport Proteins ,Secretory pathway ,Plant Proteins ,Endoplasmic reticulum ,Sodium ,Membrane Transport Proteins ,Biological Transport ,Oryza ,Golgi apparatus ,Transport protein ,Cell biology ,Membrane protein ,symbols ,OsHKT1 ,Sequence Alignment ,Research Paper - Abstract
Highlight The cargo receptor cornichon, located in the endoplasmic reticulum, interacts with the low-affinity Na+ transporter OsHKT1;3 for its delivery to the Golgi apparatus., Membrane proteins are synthesized and folded in the endoplasmic reticulum (ER), and continue their path to their site of residence along the secretory pathway. The COPII system has been identified as a key player for selecting and directing the fate of membrane and secretory cargo proteins. Selection of cargo proteins within the COPII vesicles is achieved by cargo receptors. The cornichon cargo receptor belongs to a conserved protein family found in eukaryotes that has been demonstrated to participate in the selection of integral membrane proteins as cargo for their correct targeting. Here it is demonstrated at the cellular level that rice cornichon OsCNIH1 interacts with OsHKT1;3 and, in yeast cells, enables the expression of the sodium transporter to the Golgi apparatus. Physical and functional HKT–cornichon interactions are confirmed by the mating-based split ubiquitin system, bimolecular fluorescence complementation, and Xenopus oocyte and yeast expression systems. The interaction between the two proteins occurs in the ER of plant cells and their co-expression in oocytes leads to the sequestration of the transporter in the ER. In the yeast cornichon mutant erv14, OsHKT1;3 is mistargeted, preventing the toxic effects of sodium transport in the cell observed in wild-type cells or in the erv14 mutant that co-expressed OsHKT1;3 with either OsCNIH1 or Erv14p. Identification and characterization of rice cornichon as a possible cargo receptor opens up the opportunity to improve our knowledge on membrane protein targeting in plant cells.
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- 2015
30. Osmotolerance of Dekkera bruxellensis and the role of two Stl glycerol-proton symporters
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Klara Papouskova, Jana Zemančíková, Hana Elicharová, Michala Dušková, and Hana Sychrová
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0301 basic medicine ,Glycerol ,030106 microbiology ,Saccharomyces cerevisiae ,Wine ,Microbiology ,Genome ,Fungal Proteins ,03 medical and health sciences ,Osmoregulation ,Species Specificity ,Genetics ,Molecular Biology ,Gene ,Cloning ,Fermentation in winemaking ,biology ,Dekkera ,Symporters ,Chemistry ,Genetic Complementation Test ,food and beverages ,biology.organism_classification ,Yeast ,Recombinant Proteins ,Biochemistry ,Fermentation ,Protons ,Genome, Bacterial - Abstract
Dekkera bruxellensis is important for lambic beer fermentation but is considered a spoilage yeast in wine fermentation. We compared two D. bruxellensis strains isolated from wine and found that they differ in some basic properties, including osmotolerance. The genomes of both strains contain two highly similar copies of genes encoding putative glycerol-proton symporters from the STL family that are important for yeast osmotolerance. Cloning of the two DbSTL genes and their expression in suitable osmosensitive Saccharomyces cerevisiae mutants revealed that both identified genes encode functional glycerol uptake systems, but only DbStl2 has the capacity to improve the osmotolerance of S. cerevisiae cells.
- Published
- 2017
31. Four Saccharomyces species differ in their tolerance to various stresses though they have similar basic physiological parameters
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Jana Zemančíková, Marie Kodedová, Hana Sychrová, and Klara Papouskova
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0301 basic medicine ,biology ,Chemistry ,Intracellular pH ,030106 microbiology ,General Medicine ,Metabolism ,biology.organism_classification ,Microbiology ,Saccharomyces ,Paradoxus ,Cell size ,Fungal Proteins ,03 medical and health sciences ,Proton-Translocating ATPases ,030104 developmental biology ,Glucose ,Biochemistry ,Saccharomyces species ,Stress, Physiological ,Fermentation ,Cryptobiosis - Abstract
Saccharomyces species, which are mostly used in the food and beverage industries, are known to differ in their fermentation efficiency and tolerance of adverse fermentation conditions. However, the basis of their difference has not been fully elucidated, although their genomes have been sequenced and analyzed. Five strains of four Saccharomyces species (S. cerevisiae, S. kudriavzevii, S. bayanus, and S. paradoxus), when grown in parallel in laboratory conditions, exhibit very similar basic physiological parameters such as membrane potential, intracellular pH, and the degree to which they are able to quickly activate their Pma1 H+-ATPase upon glucose addition. On the other hand, they differ in their ability to proliferate in media with a very low concentration of potassium, in their osmotolerance and tolerance to toxic cations and cationic drugs in a growth-medium specific manner, and in their capacity to survive anhydrobiosis. Overall, S. cerevisiae (T73 more than FL100) and S. paradoxus are the most robust, and S. kudriavzevii the most sensitive species. Our results suggest that the difference in stress survival is based on their ability to quickly accommodate their cell size and metabolism to changing environmental conditions and to adjust their portfolio of available detoxifying transporters.
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- 2017
32. Plant and yeast cornichon possess a conserved acidic motif required for correct targeting of plasma membrane cargos
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Daniel Lagunas-Gómez, Omar Pantoja, Olga Zimmermannova, Rosario Vera-Estrella, Paul Rosas-Santiago, Hana Sychrová, and Carolina Yáñez-Domínguez
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0301 basic medicine ,Protein Folding ,Saccharomyces cerevisiae Proteins ,Sodium-Hydrogen Exchangers ,Protein family ,Amino Acid Motifs ,Golgi Apparatus ,Saccharomyces cerevisiae ,Biology ,Endoplasmic Reticulum ,03 medical and health sciences ,Amino Acid Sequence ,Receptor ,Molecular Biology ,COPII ,Secretory pathway ,Vesicle ,Endoplasmic reticulum ,Cell Membrane ,Membrane Proteins ,Membrane Transport Proteins ,Oryza ,Cell Biology ,Transmembrane protein ,Cell biology ,Protein Transport ,030104 developmental biology ,Biochemistry ,Membrane protein ,ATP-Binding Cassette Transporters ,COP-Coated Vesicles ,Sequence Alignment - Abstract
The export of membrane proteins along the secretory pathway is initiated at the endoplasmic reticulum after proteins are folded and packaged inside this organelle by their recruiting into the coat complex COPII vesicles. It is proposed that cargo receptors are required for the correct transport of proteins to its target membrane, however, little is known about ER export signals for cargo receptors. Erv14/Cornichon belong to a well conserved protein family in Eukaryotes, and have been proposed to function as cargo receptors for many transmembrane proteins. Amino acid sequence alignment showed the presence of a conserved acidic motif in the C-terminal in homologues from plants and yeast. Here, we demonstrate that mutation of the C-terminal acidic motif from ScErv14 or OsCNIH1, did not alter the localization of these cargo receptors, however it modified the proper targeting of the plasma membrane transporters Nha1p, Pdr12p and Qdr2p. Our results suggest that mistargeting of these plasma membrane proteins is a consequence of a weaker interaction between the cargo receptor and cargo proteins caused by the mutation of the C-terminal acidic motif.
- Published
- 2017
33. Efficient secretion of three fungal laccases from Saccharomyces cerevisiae and their potential for decolorization of textile industry effluent-A comparative study
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Iva Pichová, Hana Sychrová, Zuzana Antosova, and Klára Herkommerová
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0106 biological sciences ,0301 basic medicine ,Nitrogen ,Saccharomyces cerevisiae ,Biology ,Wastewater ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,010608 biotechnology ,Botany ,Coloring Agents ,Effluent ,Trametes versicolor ,Laccase ,Trametes ,Growth medium ,biology.organism_classification ,Culture Media ,030104 developmental biology ,Biochemistry ,chemistry ,Textile Industry ,Heterologous expression ,Oxidation-Reduction ,Biotechnology ,Myceliophthora thermophila - Abstract
Laccases are enzymes with a broad range of biotechnological applications and have, for example, the ability to oxidize many xenobiotics including synthetic dyes. In order to obtain an efficient laccase for the decolorization of dyes which spoil wastewater from the textile industry, genes encoding three various laccase enzymes were expressed in Saccharomyces cerevisiae. The expression of laccases from ascomycete Myceliophthora thermophila (MtL), and two basidiomycetes Trametes versicolor (TvL) and Trametes trogii (TtL) was optimized via selection of plasmids, promoters, media composition, and cultivation conditions. For the first time, the activity of the three secreted laccases was directly compared with the use of various substrates, including different dyes and a wastewater sample. A strong constitutive ADH1 promoter, minimal growth medium, optimized combination of copper and organic nitrogen source, and low cultivation temperature were shown to significantly increase the yields and relative activities of secreted laccases. Heterologous expression of three fungal laccases was successfully achieved in S. cerevisiae being the highest for MtL and the lowest for TvL. MtL, and particularly TtL, showed the decolorization capacity. This is the first report which compared decolorization of synthetic dyes and wastewater by several recombinant laccases and suggested MtL and TtL to be applicable in the ecofriendly enzymatic treatment of colored industry effluent. © 2017 American Institute of Chemical Engineers Biotechnol. Prog., 34:69-80, 2018.
- Published
- 2017
34. Yeast Kch1 and Kch2 membrane proteins play a pleiotropic role in membrane potential establishment and monovalent cation homeostasis regulation
- Author
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Olga Zimmermannova, Petra Neveceralova, Kristina Felcmanova, and Hana Sychrová
- Subjects
0301 basic medicine ,Saccharomyces cerevisiae Proteins ,Intracellular pH ,030106 microbiology ,Saccharomyces cerevisiae ,Applied Microbiology and Biotechnology ,Microbiology ,Membrane Potentials ,Cell membrane ,03 medical and health sciences ,Cation homeostasis ,Candida albicans ,medicine ,Homeostasis ,Cation Transport Proteins ,Membrane potential ,biology ,Wild type ,General Medicine ,Cations, Monovalent ,biology.organism_classification ,Cell biology ,030104 developmental biology ,medicine.anatomical_structure ,Biochemistry ,Membrane protein ,Gene Deletion - Abstract
The Kch1 and Kch2 plasma-membrane proteins were identified in Saccharomyces cerevisiae as being essential for the activation of a high-affinity Ca2+ influx system. We searched for Kch proteins roles in the maintenance of cation homeostasis and tested the effect of kch1 and/or kch2 deletions on various physiological parameters. Compared to wild-type, kch1 kch2 mutant cells were smaller, relatively hyperpolarised, grew better under limited K+ conditions and exhibited altered growth in the presence of monovalent cations. The absence of Kch1 and Kch2 did not change the intracellular pH in cells growing at low potassium or the tolerance of cells to divalent cations, high concentration of sorbitol or extreme external pH. The overexpression of KCH1 only increased the intracellular pH in the presence of elevated K+ in media. None of the phenotypes associated with the deletion of KCH1 and KCH2 in wild type were observed in a strain lacking KCH genes and main K+ uptake systems Trk1 and Trk2. The role of the Kch homologue in cation homeostasis was also tested in Candida albicans cells. Our data demonstrate that Kch proteins significantly contribute to the maintenance of optimal cation homeostasis and membrane potential in S. cerevisiae but not in C. albicans.
- Published
- 2017
35. Lack of cortical endoplasmic reticulum protein Ist2 alters sodium accumulation in Saccharomyces cerevisiae cells
- Author
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Klara Papouskova, Marketa Andrsova, and Hana Sychrová
- Subjects
0301 basic medicine ,Saccharomyces cerevisiae Proteins ,Sodium ,030106 microbiology ,Saccharomyces cerevisiae ,chemistry.chemical_element ,Endoplasmic Reticulum ,Applied Microbiology and Biotechnology ,Microbiology ,03 medical and health sciences ,Cations ,Homeostasis ,Cortical endoplasmic reticulum ,biology ,Endoplasmic reticulum ,STIM1 ,General Medicine ,biology.organism_classification ,Yeast ,Cell biology ,chemistry ,Cytoplasm ,Gene Deletion ,Intracellular - Abstract
The maintenance of intracellular alkali-metal-cation homeostasis is a fundamental property of all living organisms, including the yeast Saccharomyces cerevisiae. Several transport systems are indispensable to ensure proper alkali-metal-cation levels in the yeast cytoplasm and organelles. Ist2 is an endoplasmic reticulum (ER)-resident protein involved, together with other tethering proteins, in the formation of contacts between the plasma and ER membranes. As IST2 gene deletion was shown to influence yeast growth in the presence of sodium, we focused on the roles of Ist2 in the cell response to the presence of various concentrations of alkali metal cations, and its interactions with characterised plasma membrane alkali-metal-cation transporters. Most importantly, we show that, in BY4741 background, the lack of Ist2 results in the accumulation of higher amounts of sodium when the cells are exposed to the presence of this cation, demonstrating the importance of Ist2 for the maintenance of low intracellular levels of toxic sodium. As the function and localisation of alkali-metal-cation exporters is not affected in ist2Δ cells, IST2 deletion results in an increased non-specific uptake of sodium to cells. Moreover, the deletion of IST2 influences relative cell membrane potential, pHin and the growth of cells in the presence of a limiting K+ concentration.
- Published
- 2017
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36. Osmotolerant yeast species differ in basic physiological parameters and in tolerance of non-osmotic stresses
- Author
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Michala Bubnová, Jana Zemančíková, and Hana Sychrová
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biology ,Saccharomyces cerevisiae ,Bioengineering ,biology.organism_classification ,Applied Microbiology and Biotechnology ,Biochemistry ,Yeast ,Cell size ,Debaryomyces hansenii ,Botany ,Genetics ,Osmotic pressure ,Food science ,Stress conditions ,Sugar ,Cryptobiosis ,Biotechnology - Abstract
Osmotolerance is the ability to grow in an environment with a high osmotic pressure. In this study we compared the physiological parameters and tolerance to osmotic and non-osmotic stresses of three osmotolerant yeast species, Debaryomyces hansenii, Pichia farinosa (sorbitophila) and Zygosaccharomyces rouxii, with those of wild-type Saccharomyces cerevisiae. Although the osmotolerant species did not differ significantly in their basic parameters, such as cell size or growth capacity, they had different abilities to survive anhydrobiosis, potassium limitation or the presence of toxic cationic drugs. When their osmotolerance was compared, the results revealed that some of the species isolated as sugar/polyol-tolerant (e.g. P. farinosa) are also highly tolerant to salts and, vice versa, some strains isolated from an environment with high concentration of salt (e.g. Z. rouxii ATCC 42981) tolerate high concentrations of sugars. None of the tested strains and species was osmophilic. Taken together, our results showed that P. farinosa (sorbitophila) is the most robust species when coping with various stresses, while Z. rouxii CBS 732, although osmotolerant in general, is not specifically salt-tolerant and is quite sensitive to most of the tested stress conditions. Copyright © 2014 John Wiley & Sons, Ltd.
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- 2014
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37. The activity of Saccharomyces cerevisiae Na+, K+/H+ antiporter Nha1 is negatively regulated by 14-3-3 protein binding at serine 481
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Katerina Stankova, Tomas Obsil, Olivia Petrvalska, Veronika Obsilova, Olga Zimmermannova, Josef Lazar, A. Smidova, and Hana Sychrová
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0303 health sciences ,biology ,Phosphopeptide ,Chemistry ,Antiporter ,030302 biochemistry & molecular biology ,Saccharomyces cerevisiae ,Cell Biology ,biology.organism_classification ,Yeast ,Serine ,03 medical and health sciences ,Biochemistry ,14-3-3 protein binding ,Binding site ,Molecular Biology ,14-3-3 protein ,030304 developmental biology - Abstract
Na+/H+ antiporters are involved in ensuring optimal intracellular concentrations of alkali-metal cations and protons in most organisms. In Saccharomyces cerevisiae, the plasma-membrane Na+, K+/H+ antiporter Nha1 mediates Na+ and K+ efflux, which is important for cell growth in the presence of salts. Nha1 belongs among housekeeping proteins and, due to its ability to export K+, it has many physiological functions. The Nha1 transport activity is regulated through its long, hydrophilic and unstructured C-terminus (554 of 985 aa). Although Nha1 has been previously shown to interact with the yeast 14-3-3 isoform (Bmh2), the binding site remains unknown. In this work, we identified the residues through which Nha1 interacts with the 14-3-3 protein. Biophysical characterization of the interaction between the C-terminal polypeptide of Nha1 and Bmh proteins in vitro revealed that the 14-3-3 protein binds to phosphorylated Ser481 of Nha1, and the crystal structure of the phosphopeptide containing Ser481 bound to Bmh1 provided the structural basis of this interaction. Our data indicate that 14-3-3 binding induces a disorder-to-order transition of the C-terminus of Nha1, and in vivo experiments showed that the mutation of Ser481 to Ala significantly increases cation efflux activity via Nha1, which renders cells sensitive to low K+ concentrations. Hence, 14-3-3 binding is apparently essential for the negative regulation of Nha1 activity, which should be low under standard growth conditions, when low amounts of toxic salts are present and yeast cells need to accumulate high amounts of K+.
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- 2019
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38. Role of Saccharomyces cerevisiae Trk1 in stabilization of intracellular potassium content upon changes in external potassium levels
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Maik Kschischo, María C. Álvarez, Marie Kodedová, Hana Sychrová, José Ramos, Rito Herrera, and Samuel Gelis
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Saccharomyces cerevisiae Proteins ,Potassium ,ATPase ,Saccharomyces cerevisiae ,Biophysics ,chemistry.chemical_element ,Biology ,Biochemistry ,Gene Expression Regulation, Fungal ,Trk transporter ,Non-perfect adaptation ,Extracellular ,Cation Transport Proteins ,Ion Transport ,Neurospora crassa ,Genetic Complementation Test ,Wild type ,Cell Biology ,Cations, Monovalent ,biology.organism_classification ,Adaptation, Physiological ,Proton-Translocating ATPases ,chemistry ,Trk receptor ,Mutation ,biology.protein ,Heterologous expression ,Intracellular potassium ,Intracellular - Abstract
Saccharomyces cerevisiae cells are able to grow at very different potassium concentrations adapting its intracellular cation levels to changes in the external milieu. Potassium homeostasis in wild type cells resuspended in media with low potassium is an example of non-perfect adaptation since the same intracellular concentration is not approached irrespective of the extracellular levels of the cation. By using yeasts lacking the Trk1,2 system or expressing different versions of the mutated main plasma membrane potassium transporter (Trk1), we show that Trk1 is not essential for adaptation to potassium changes but the dynamics of potassium loss is very different in the wild type and in trk1,2 mutant or in yeasts expressing Trk1 versions with highly impaired transport characteristics. We also show that the pattern here described can be also fulfilled by heterologous expression of NcHAK1, a potassium transporter not belonging to the TRK family. Hyperpolarization and cationic drugs sensitivity in mutants with defective transport capacity provide additional support to the hypothesis of connections between the activity of the Trk system and the plasma membrane H+ ATPase (Pma1) in the adaptive process.
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- 2014
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39. Potassium uptake system Trk2 is crucial for yeast cell viability during anhydrobiosis
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Alexander Rapoport, Diana Borovikova, Pavla Herynkova, and Hana Sychrová
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Saccharomyces cerevisiae Proteins ,ATPase ,Antiporter ,Potassium ,Saccharomyces cerevisiae ,chemistry.chemical_element ,Microbiology ,Genetics ,Homeostasis ,Viability assay ,Desiccation ,Cation Transport Proteins ,Molecular Biology ,Sequence Deletion ,Microbial Viability ,biology ,Biological Transport ,biology.organism_classification ,Yeast ,Biochemistry ,chemistry ,biology.protein ,Efflux ,Intracellular - Abstract
Yeasts grow at very different potassium concentrations, adapting their intracellular cation levels to changes in the external environment. Potassium homeostasis is maintained with the help of several transporters mediating the uptake and efflux of potassium with various affinities and mechanisms. In the model yeast Saccharomyces cerevisiae, two uptake systems, Trk1 and Trk2, are responsible for the accumulation of a relatively high intracellular potassium content (200-300 mM) and the efflux of surplus potassium is mediated by the Tok1 channel and active exporters Ena ATPase and Nha1 cation/proton antiporter. Using a series of deletion mutants, we studied the role of individual potassium transporters in yeast cell resistance to dehydration. The Trk2 transporter (whose role in S. cerevisiae physiology was not clear) is important for cell viability in the stationary phase of growth and, moreover, it plays a crucial role in the yeast survival of dehydration/rehydration treatments. Mutants lacking the TRK2 gene accumulated significantly lower amounts of potassium ions in the stationary culture growth phase, and these lower amounts correlated with decreased resistance to dehydration/rehydration stress. Our results showed Trk2 to be the major potassium uptake system in stationary cells, and potassium content to be a crucial parameter for desiccation survival.
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- 2013
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40. Fluconazole treatment hyperpolarizes the plasma membrane ofCandidacells
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Hana Elicharová and Hana Sychrová
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Antifungal Agents ,Sodium ,chemistry.chemical_element ,Lithium ,Biology ,Membrane Potentials ,Microbiology ,Cell membrane ,Cytosol ,Osmotic Pressure ,medicine ,Osmotic pressure ,Fluconazole ,Candida ,Membrane potential ,Cell Membrane ,General Medicine ,Hyperpolarization (biology) ,Corpus albicans ,Infectious Diseases ,medicine.anatomical_structure ,chemistry ,Intracellular ,medicine.drug - Abstract
Five pathogenic Candida species were compared in terms of their osmotolerance, tolerance to toxic sodium and lithium cations, and resistance to fluconazole. The species not only differed, in general, in their tolerance to high osmotic pressure (C. albicans and C. parapsilosis being the most osmotolerant) but exhibited distinct sensitivities to toxic sodium and lithium cations, with C. parapsilosis and C. tropicalis being very tolerant but C. krusei and C. dubliniensis sensitive to LiCl. The treatment of both fluconazole-susceptible (C. albicans and C. parapsilosis) and fluconazole-resistant (C. dubliniensis, C. krusei and C. tropicalis) growing cells with subinhibitory concentrations of fluconazole resulted in substantially elevated intracellular Na(+) levels. Using a diS-C3(3) assay, for the first time, to monitor the relative membrane potential (ΔΨ) of Candida cells, we show that the fluconazole treatment of growing cells of all five species results in a substantial hyperpolarization of their plasma membranes, which is responsible for an increased non-specific transport of toxic alkali metal cations and other cationic drugs (e.g., hygromycin B). Thus, the combination of relatively low doses of fluconazole and drugs, whose import into the tested Candida strains is driven by the cell membrane potential, might be especially potent in terms of its ability to inhibit the growth of or even kill various Candida species.
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- 2013
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41. Saccharomyces cerevisiae can secrete Sapp1p proteinase of Candida parapsilosis but cannot use it for efficient nitrogen acquisition
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Zuzana Vinterová, Hana Sychrová, Václava Bauerová, Olga Hrušková-Heidingsfeldová, Iva Pichová, and Jiří Dostál
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chemistry.chemical_classification ,Signal peptide ,biology ,Nitrogen ,Mutant ,Saccharomyces cerevisiae ,General Medicine ,Real-Time Polymerase Chain Reaction ,biology.organism_classification ,Candida parapsilosis ,Applied Microbiology and Biotechnology ,Microbiology ,Molecular biology ,Amino acid ,Plasmid ,Biochemistry ,chemistry ,Proteinase 3 ,Endopeptidases ,Gene ,Candida - Abstract
Secreted aspartic proteinase Sapp1p of Candida parapsilosis represents one of the factors contributing to the pathogenicity of the fungus. The proteinase is synthesized as an inactive pre-pro-enzyme, but only processed Sapp1p is secreted into extracellular space. We constructed a plasmid containing the SAPP1 coding sequence under control of the ScGAL1 promoter and used it for proteinase expression in a Saccharomyces cerevisiae kex2Δ mutant. Because Sapp1p maturation depends on cleavage by Kex2p proteinase, the kex2Δ mutant secreted only the pro-form of Sapp1p. Characterization of this secreted proteinase form revealed that the Sapp1p signal peptide consists of 23 amino acids. Additionally, we prepared a plasmid with the SAPP1 coding sequence under control of its authentic CpSAPP1 promoter, which contains two GATAA motifs. While in C. parapsilosis SAPP1 expression is repressed by good low molecular weight nitrogen sources (e.g., ammonium ions), S. cerevisiae cells harboring this plasmid secreted a low concentration of active proteinase regardless of the type of nitrogen source used. Quantitative real-time PCR analysis of a set of genes related to nitrogen metabolism and uptake (GAT1, GLN3, STP2, GAP1, OPT1, and PTR2) obtained from S. cerevisiae cells transformed with either plasmid encoding SAPP1 under control of its own promoter or empty vector and cultivated in media containing various nitrogen sources also suggested that SAPP1 expression can be connected with the S. cerevisiae regulatory network. However, this regulation occurs in a different manner than in C. parapsilosis.
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- 2013
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42. Characterization of the Candida albicans Amino Acid Permease Family: Gap2 Is the Only General Amino Acid Permease and Gap4 Is an S-Adenosylmethionine (SAM) Transporter Required for SAM-Induced Morphogenesis
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Patrick Van Dijck, Sanne Sanne I Schrevens, Lucie Kraidlova, Hana Sychrová, Hélène Tournu, Griet Van Zeebroeck, and Butler, Geraldine
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0301 basic medicine ,Molecular Biology and Physiology ,S-adenosyl methionine ,030106 microbiology ,Saccharomyces cerevisiae ,lcsh:QR1-502 ,morphogenesis ,Microbiology ,lcsh:Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,Candida albicans ,S-Adenosyl methionine ,Molecular Biology ,Gene ,chemistry.chemical_classification ,biology ,Permease ,Metabolism ,general amino acid permease ,biology.organism_classification ,Amino acid ,Amino acid permease ,030104 developmental biology ,chemistry ,Biochemistry ,GAP1 ,Research Article - Abstract
Candida albicans is a commensal organism that can thrive in many niches in its human host. The environmental conditions at these different niches differ quite a bit, and this fungus must be able to sense these changes and adapt its metabolism to them. Apart from glucose and other sugars, the uptake of amino acids is very important. This is underscored by the fact that the C. albicans genome encodes 6 orthologues of the Saccharomyces. cerevisiae general amino acid permease Gap1 and many other amino acid transporters. In this work, we characterize these six permeases and we show that C. albicans Gap2 is the functional orthologue of ScGap1 and that C. albicans Gap4 is an orthologue of ScSam3, an S-adenosylmethionine (SAM) transporter. Furthermore, we show that Gap4 is required for SAM-induced morphogenesis, an important virulence factor of C. albicans., Amino acids are key sources of nitrogen for growth of Candida albicans. In order to detect and take up these amino acids from a broad range of different and changing nitrogen sources inside the host, this fungus must be able to adapt via its expression of genes for amino acid uptake and further metabolism. We analyzed six C. albicans putative general amino acid permeases based on their homology to the Saccharomyces cerevisiae Gap1 general amino acid permease. We generated single- and multiple-deletion strains and found that, based on growth assays and transcriptional or posttranscriptional regulation, Gap2 is the functional orthologue to ScGap1, with broad substrate specificity. Expression analysis showed that expression of all GAP genes is under control of the Csy1 amino acid sensor, which is different from the situation in S. cerevisiae, where the expression of ScGAP1 is not regulated by Ssy1. We show that Gap4 is the functional orthologue of ScSam3, the only S-adenosylmethionine (SAM) transporter in S. cerevisiae, and we report that Gap4 is required for SAM-induced morphogenesis. IMPORTANCE Candida albicans is a commensal organism that can thrive in many niches in its human host. The environmental conditions at these different niches differ quite a bit, and this fungus must be able to sense these changes and adapt its metabolism to them. Apart from glucose and other sugars, the uptake of amino acids is very important. This is underscored by the fact that the C. albicans genome encodes 6 orthologues of the Saccharomyces. cerevisiae general amino acid permease Gap1 and many other amino acid transporters. In this work, we characterize these six permeases and we show that C. albicans Gap2 is the functional orthologue of ScGap1 and that C. albicans Gap4 is an orthologue of ScSam3, an S-adenosylmethionine (SAM) transporter. Furthermore, we show that Gap4 is required for SAM-induced morphogenesis, an important virulence factor of C. albicans.
- Published
- 2016
43. Alternative Glycerol Balance Strategies among Saccharomyces Species in Response to Winemaking Stress
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Jana Zemančíková, Bruno M. Oliveira, Hana Sychrová, Roberto Pérez-Torrado, Amparo Querol, European Commission, Ministério da Educação (Brasil), Ministerio de Economía y Competitividad (España), Generalitat Valenciana, and Czech Science Foundation
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0301 basic medicine ,Glycerol ,Microbiology (medical) ,lcsh:QR1-502 ,glycerol ,yeast ,Stress ,Paradoxus ,Saccharomyces ,Microbiology ,lcsh:Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,stress ,Winemaking ,Original Research ,biology ,Osmotic concentration ,biology.organism_classification ,winemaking ,Yeast ,030104 developmental biology ,Biochemistry ,chemistry ,Fermentation ,Efflux - Abstract
Production and balance of glycerol is essential for the survival of yeast cells in certain stressful conditions as hyperosmotic or cold shock that occur during industrial processes as winemaking. These stress responses are well-known in S. cerevisiae, however, little is known in other phylogenetically close related Saccharomyces species associated with natural or fermentation environments such as S. uvarum, S. paradoxus or S. kudriavzevii. In this work we have investigated the expression of four genes (GPD1, GPD2, STL1, and FPS1) crucial in the glycerol pool balance in the four species with a biotechnological potential (S. cerevisiae; S. paradoxus; S. uvarum; and S. kudriavzevii), and the ability of strains to grow under osmotic and cold stresses. The results show different pattern and level of expression among the different species, especially for STL1. We also studied the function of Stl1 glycerol symporter in the survival to osmotic changes and cell growth capacity in winemaking environments. These experiments also revealed a different functionality of the glycerol transporters among the different species studied. All these data point to different strategies to handle glycerol accumulation in response to winemaking stresses as hyperosmotic or cold-hyperosmotic stress in the different species, with variable emphasis in the production, influx, or efflux of glycerol., BO was supported by CAPES the Brazilian Federal Agency for the Support and Evaluation of Graduate Education (Brazilian Ministry of Education). This work has been supported by grants AGL2012-39937-C02-01 and AGL2015-67504-C3-1-R from the Spanish Government, FEDER, and Generalitat Valenciana PROMETEOII/2014/042 to AQ, GA CR 15-03708S from the Czech National Foundation to HS, and by the European Commission FP7: Marie Curie Initial Training Network CORNUCOPIA no. 264717 to AQ and HS.
- Published
- 2016
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44. High-throughput fluorescence screening assay for the identification and comparison of antimicrobial peptides' activity on various yeast species
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Hana Sychrová and Marie Kodedová
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0301 basic medicine ,Antifungal Agents ,Cell Membrane Permeability ,030106 microbiology ,Antimicrobial peptides ,Bioengineering ,Peptide ,Applied Microbiology and Biotechnology ,Saccharomyces ,Microbiology ,Cell membrane ,03 medical and health sciences ,medicine ,Pathogen ,chemistry.chemical_classification ,biology ,Cell Membrane ,Fungi ,General Medicine ,biology.organism_classification ,Yeast ,High-Throughput Screening Assays ,Multiple drug resistance ,medicine.anatomical_structure ,Spectrometry, Fluorescence ,Mechanism of action ,chemistry ,medicine.symptom ,Biotechnology ,Antimicrobial Cationic Peptides - Abstract
New antifungal compounds that circumvent the resistance of the pathogen by directly damaging yeast cell surface structures are promising agents for the treatment of fungal infections, due to their different mechanism of action from current clinically used antifungal drugs. We present here a rapid and cost-effective fluorescence method suitable for identifying new potent drugs that directly target yeast cell surface structures, causing cell permeabilization and thus bypassing the multidrug resistance mechanisms of pathogens. The fluorescence assay enabled us to detect with high sensitivity damage to the Candida plasma membrane (its hyperpolarization and permeabilization) as a result of short-term exposure to the antifungal compounds. Results can be obtained in 1-2h with minimal effort and consumption of the tested compounds, also 96 samples can be analysed simultaneously. We used this method to study antimicrobial peptides isolated from the venom of bees and their synthetic analogs, compare the potency of the peptides and determine their minimal effective concentrations. The antimicrobial peptides were able to kill yeast cells at low concentrations within a 15-min treatment, the LL-III peptide exhibited a broad spectrum of antifungal activity on various Saccharomyces, pathogenic Candida and osmotolerant yeast species.
- Published
- 2016
45. Pathogenic Candida species differ in the ability to grow at limiting potassium concentrations
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Barbora Hušeková, Hana Elicharová, and Hana Sychrová
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0301 basic medicine ,ATPase ,Potassium ,030106 microbiology ,Immunology ,chemistry.chemical_element ,Candida glabrata ,Biology ,Applied Microbiology and Biotechnology ,Microbiology ,Candida tropicalis ,03 medical and health sciences ,Candida albicans ,Genetics ,Molecular Biology ,Candida ,General Medicine ,biology.organism_classification ,Yeast ,Corpus albicans ,030104 developmental biology ,Biochemistry ,chemistry ,biology.protein ,Genome, Fungal ,Intracellular - Abstract
A high intracellular concentration of potassium (200–300 mmol/L) is essential for many yeast cell functions, such as the regulation of cell volume and pH, maintenance of membrane potential, and enzyme activation. Thus, cells use high-affinity specific transporters and expend a lot of energy to acquire the necessary amount of potassium from their environment. In Candida genomes, genes encoding 3 types of putative potassium uptake systems were identified: Trk uniporters, Hak symporters, and Acu ATPases. Tests of the tolerance and sensitivity of C. albicans, C. dubliniensis, C. glabrata, C. krusei, C. parapsilosis, and C. tropicalis to various concentrations of potassium showed significant differences among the species, and these differences were partly dependent on external pH. The species most tolerant to potassium-limiting conditions were C. albicans and C. krusei, while C. parapsilosis tolerated the highest KCl concentrations. Also, the morphology of cells changed with the amount of potassium available, with C. krusei and C. tropicalis being the most influenced. Taken together, our results confirm potassium uptake and accumulation as important factors for Candida cell growth and suggest that the sole (and thus probably indispensable) Trk1 potassium uptake system in C. krusei and C. glabrata may serve as a target for the development of new antifungal drugs.
- Published
- 2016
46. Role of individual phosphorylation sites for the 14-3-3-protein-dependent activation of yeast neutral trehalase Nth1
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Petr Vacha, Veronika Obsilova, Tomas Obsil, Lenka Rezabkova, Hana Sychrová, Eva Macakova, Miroslav Šulc, and Dana Veisova
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chemistry.chemical_classification ,biology ,Saccharomyces cerevisiae ,Cell Biology ,biology.organism_classification ,Biochemistry ,Enzyme Activation ,Enzyme activator ,Enzyme ,14-3-3 Proteins ,chemistry ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Mutation ,Proteolysis ,Phosphorylation ,Trehalase ,Enzyme kinetics ,Protein kinase A ,Energy source ,Molecular Biology - Abstract
Trehalases are important highly conserved enzymes found in a wide variety of organisms and are responsible for the hydrolysis of trehalose that serves as a carbon and energy source as well as a universal stress protectant. Emerging evidence indicates that the enzymatic activity of the neutral trehalase Nth1 in yeast is enhanced by 14-3-3 protein binding in a phosphorylation-dependent manner through an unknown mechanism. In the present study, we investigated in detail the interaction between Saccharomyces cerevisiae Nth1 and 14-3-3 protein isoforms Bmh1 and Bmh2. We determined four residues that are phosphorylated by PKA (protein kinase A) in vitro within the disordered N-terminal segment of Nth1. Sedimentation analysis and enzyme kinetics measurements show that both yeast 14-3-3 isoforms form a stable complex with phosphorylated Nth1 and significantly enhance its enzymatic activity. The 14-3-3-dependent activation of Nth1 is significantly more potent compared with Ca2+-dependent activation. Limited proteolysis confirmed that the 14-3-3 proteins interact with the N-terminal segment of Nth1 where all phosphorylation sites are located. Site-directed mutagenesis in conjunction with the enzyme activity measurements in vitro and the activation studies of mutant forms in vivo suggest that Ser60 and Ser83 are sites primarily responsible for PKA-dependent and 14-3-3-mediated activation of Nth1.
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- 2012
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47. Plasma-membrane hyperpolarization diminishes the cation efflux via Nha1 antiporter and Ena ATPase under potassium-limiting conditions
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Jaromír Zahrádka and Hana Sychrová
- Subjects
BK channel ,Potassium Channels ,Saccharomyces cerevisiae Proteins ,Sodium-Hydrogen Exchangers ,Potassium ,Antiporter ,ATPase ,chemistry.chemical_element ,Saccharomyces cerevisiae ,Applied Microbiology and Biotechnology ,Microbiology ,Membrane Potentials ,Cations ,Cation Transport Proteins ,Membrane potential ,biology ,Cell Membrane ,General Medicine ,Voltage-gated potassium channel ,Membrane hyperpolarization ,chemistry ,Biochemistry ,biology.protein ,Biophysics ,Efflux ,Sodium-Potassium-Exchanging ATPase - Abstract
Saccharomyces cerevisiae extrudes K(+) cations even when potassium is only present in scarce amounts in the environment. Lost potassium is taken up by the Trk1 and Trk2 uptake systems. If the Trk transporters are absent or nonfunctional, the efflux of potassium is significantly diminished. A series of experiments with strains lacking various combinations of potassium efflux and uptake systems revealed that all three potassium-exporting systems the Nha1 antiporter, Ena ATPase and Tok1 channel contribute to potassium homeostasis and are active upon potassium limitation in wild-type cells. In trk1Δ trk2Δ mutants, the potassium efflux via potassium exporters Nha1 and Ena1 is diminished and can be restored either by the expression of TRK1 or deletion of TOK1. In both cases, the relative hyperpolarization of trk1Δ trk2Δ cells is decreased. Thus, it is the plasma-membrane potential which serves as the common mechanism regulating the activity of K(+) exporting systems. There is a continuous uptake and efflux of potassium in yeast cells to regulate their membrane potential and thereby other physiological parameters, and the cells are able to quickly and efficiently compensate for a malfunction of potassium transport in one direction by diminishing the transport in the other direction.
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- 2012
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48. A Genomewide Screen for Tolerance to Cationic Drugs Reveals Genes Important for Potassium Homeostasis in Saccharomyces cerevisiae
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Ivan Olier, Clara Navarrete, Rito Herrera, Lydie Maresova, Joaquín Ariño, Jesús Giraldo, José Ramos, Silvia Petrezsélyová, Lina Barreto, Lynne Yenush, Jorge Pérez-Valle, David Canadell, and Hana Sychrová
- Subjects
Saccharomyces cerevisiae Proteins ,Quaternary ammonium derivative ,TRK1 protein, S cerevisiae ,Physiology ,Potassium ,Mutant ,Saccharomyces cerevisiae ,chemistry.chemical_element ,Microbiology ,Article ,Membrane Potentials ,chemistry.chemical_compound ,Saccharomyces cerevisiae protein ,Genetics ,BIOQUIMICA Y BIOLOGIA MOLECULAR ,Homeostasis ,Transport at the cellular level ,Electrochemical gradient ,Cation Transport Proteins ,Molecular Biology ,Gene ,biology ,Tetramethylammonium ,Kinase ,Cell membrane potential ,Biological Transport ,Articles ,General Medicine ,PMA1 protein, S cerevisiae ,biology.organism_classification ,Cation transport protein ,Quaternary Ammonium Compounds ,Proton-Translocating ATPases ,Metabolism ,Phenotype ,Proton transporting adenosine triphosphatase ,chemistry ,Biochemistry ,Mutation ,Spermine ,Hygromycin B ,Intracellular - Abstract
[EN] Potassium homeostasis is crucial for living cells. In the yeast Saccharomyces cerevisiae, the uptake of potassium is driven by the electrochemical gradient generated by the Pma1 H +-ATPase, and this process represents a major consumer of the gradient. We considered that any mutation resulting in an alteration of the electrochemical gradient could give rise to anomalous sensitivity to any cationic drug independently of its toxicity mechanism. Here, we describe a genomewide screen for mutants that present altered tolerance to hygromycin B, spermine, and tetramethylammonium. Two hundred twenty-six mutant strains displayed altered tolerance to all three drugs (202 hypersensitive and 24 hypertolerant), and more than 50% presented a strong or moderate growth defect at a limiting potassium concentration (1 mM). Functional groups such as protein kinases and phosphatases, intracellular trafficking, transcription, or cell cycle and DNA processing were enriched. Essentially, our screen has identified a substantial number of genes that were not previously described to play a direct or indirect role in potassium homeostasis. A subset of 27 representative mutants were selected and subjected to diverse biochemical tests that, in some cases, allowed us to postulate the basis for the observed phenotypes. © 2011, American Society for Microbiology. All Rights Reserved., This work was supported by grants BFU2008-04188-C03-01, GEN2006-27748-C2-1-E/SYS (SysMo ERA-NET), and EUI200904147 (SysMo2 ERA-NET) to J.A.; GEN2006-27748-C2-2-E/SYS (SysMo ERA-NET) and BFU2008-04188-C03-03 to J.R.; and BFU2008-04188-C03-03 to L.Y. (Ministry of Science and Innovation, Spain, and FEDER). Work in the laboratory of the Institute of Physiology in Prague was supported by grants MSMT LC531, GA AS CR IAA500110801, and AV0Z 50110509. J.A. was the recipient of an Ajut 2009SGR-1091 and an ICREA academia award (Generalitat de Catalunya).
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- 2011
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49. The Candida albicans GAP Gene Family Encodes Permeases Involved in General and Specific Amino Acid Uptake and Sensing
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Lucie Kraidlova, Griet Van Zeebroeck, Hana Sychrová, and Patrick Van Dijck
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Saccharomyces cerevisiae Proteins ,Amino Acid Transport Systems ,Genes, Fungal ,Molecular Sequence Data ,Saccharomyces cerevisiae ,Biology ,Microbiology ,chemistry.chemical_compound ,Gene Expression Regulation, Fungal ,Candida albicans ,Molecular Biology ,Gene ,chemistry.chemical_classification ,Methionine ,Base Sequence ,Permease ,Articles ,General Medicine ,biology.organism_classification ,Cyclic AMP-Dependent Protein Kinases ,Corpus albicans ,Amino acid ,Amino acid permease ,chemistry ,Biochemistry - Abstract
The Saccharomyces cerevisiae general amino acid permease Gap1 ( Sc Gap1) not only mediates the uptake of most amino acids but also functions as a receptor for the activation of protein kinase A (PKA). Fungal pathogens can colonize different niches in the host, each containing various levels of different amino acids and sugars. The Candida albicans genome contains six genes homologous to the S. cerevisiae GAP1 . The expression of these six genes in S. cerevisiae showed that the products of all six C. albicans genes differ in their transport capacities. C. albicans Gap2 ( Ca Gap2) is the true orthologue of Sc Gap1 as it transports all tested amino acids. The other Ca Gap proteins have narrower substrate specificities though Ca Gap1 and Ca Gap6 transport several structurally unrelated amino acids. Ca Gap1, Ca Gap2, and Ca Gap6 also function as sensors. Upon detecting some amino acids, e.g., methionine, they are involved in a rapid activation of trehalase, a downstream target of PKA. Our data show that CaGAP genes can be functionally expressed in S. cerevisiae and that Ca Gap permeases communicate to the intracellular signal transduction pathway similarly to Sc Gap1.
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- 2011
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50. Monovalent cations regulate expression and activity of the Hak1 potassium transporter in Debaryomyces hansenii
- Author
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Hana Sychrová, José L. Martínez, and José Ramos
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Regulation of gene expression ,Membrane potential ,Symporters ,Gene Expression Profiling ,Potassium ,Sodium ,chemistry.chemical_element ,Transporter ,Cations, Monovalent ,Hydrogen-Ion Concentration ,Biology ,biology.organism_classification ,Microbiology ,Culture Media ,Biochemistry ,chemistry ,Gene Expression Regulation, Fungal ,Saccharomycetales ,Symporter ,Debaryomyces hansenii ,Genetics ,Transcriptional regulation ,Na+/K+-ATPase - Abstract
Debaryomyces hansenii was able to grow in a medium containing residual amounts of K(+), indicating the activity of high affinity K(+) transporters. Transcriptional regulation analysis of the genes encoding the two potassium uptake systems in D. hansenii revealed that while DhTRK1 is not regulated at transcriptional level, expression of DhHAK1 required starvation in the absence of K(+) and Na(+) and was not affected by changes in membrane potential. Rb(+) transport in cells expressing DhHAK1 was activated by external Na(+) or acidic pH and inhibited by high pH. We propose a K(+)-H(+) symporter that, under certain conditions may work as a K(+)-Na(+) transporter, as the mechanism driving K(+) influx mediated by DhHak1p.
- Published
- 2011
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