180 results on '"Haibin Xu"'
Search Results
2. Response and soil pressure distribution around a single batter pile under oblique uplift loading
- Author
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Haibin Xu, Kaiyuan Liu, Wenlong Zhu, Zhibao Nie, Chengshun Xu, and Xiaogang Jia
- Subjects
Earth and Planetary Sciences (miscellaneous) ,Geotechnical Engineering and Engineering Geology - Abstract
Batter piles often bear high horizontal resistance and oblique uplift load transformed from high-rise superstructures, and the direction of the oblique uplift load changes with the horizontal displacement of the superstructure. However, the working behaviour of batter piles under such working conditions is less understood. Therefore, a series of laboratory and numerical studies is carried out. A new type of tactile pressure sensor is also used to measure the soil pressure around the pile. Three major conclusions are summarised from the results. First, the lateral response of the batter pile is affected by the loading angle, while the axial response is not. Second, the at-rest soil pressure on the batter pile is in the ‘offset’ state, which can be fitted with an elliptic function. The pile–soil interaction below a certain depth is not affected by the pile angles, and the pile can be designed as the axial uplift pile. The soil stiffness varies within 0.4L and 5D in the axial and radial directions of the pile, respectively. The increase in pile inclination and loading angle can reduce the stiffness degradation to a certain degree. The findings of this research can support engineering practice in the design of batter piles.
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- 2023
3. A two‐step spatially explicit optimization approach of integrating ecosystem services ( <scp>ES</scp> ) into land use planning ( <scp>LUP</scp> ) to generate the optimally sustainable schemes
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Xin Li, Haibin Xu, Xiaodong Ma, and Ying Huang
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Soil Science ,Environmental Chemistry ,Development ,General Environmental Science - Published
- 2023
4. Metabolic Glycoengineering: A Promising Strategy to Remodel Microenvironments for Regenerative Therapy
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Yi Li, Yuang Zhang, Yiqin Tao, Xianpeng Huang, Chao Yu, Haibin Xu, Jiangjie Chen, Kaishun Xia, Kesi Shi, Yongxiang Zhang, Jingkai Wang, Jiawei Shu, Feng Cheng, Shaoke Wang, Chengzhen Liang, Fangcai Li, Xiaopeng Zhou, and Qixin Chen
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Cell Biology ,Molecular Biology - Abstract
Cell-based regenerative therapy utilizes the differentiation potential of stem cells to rejuvenate tissues. But the dynamic fate of stem cells is calling for precise control to optimize their therapeutic efficiency. Stem cell fate is regulated by specific conditions called “microenvironments.” Among the various factors in the microenvironment, the cell-surface glycan acts as a mediator of cell-matrix and cell-cell interactions and manipulates the behavior of cells. Herein, metabolic glycoengineering (MGE) is an easy but powerful technology for remodeling the structure of glycan. By presenting unnatural glycans on the surface, MGE provides us an opportunity to reshape the microenvironment and evoke desired cellular responses. In this review, we firstly focused on the determining role of glycans on cellular activity; then, we introduced how MGE influences glycosylation and subsequently affects cell fate; at last, we outlined the application of MGE in regenerative therapy, especially in the musculoskeletal system, and the future direction of MGE is discussed.
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- 2023
5. Analytical solution of dynamic response of horizontal vibrating pile with different soil viscoelastic half-space types
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Yiming Huang, Mi Zhao, Piguang Wang, Haibin Xu, and Xiuli Du
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Applied Mathematics ,Modeling and Simulation - Published
- 2023
6. A numerical model with high-accuracy and high-efficiency for the soil dynamic impedance of pile groups under vertical vibration
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Piguang Wang, Mengzhi Zhang, Junqi Zhang, Haibin Xu, and Xiuli Du
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Architecture ,Building and Construction ,Safety, Risk, Reliability and Quality ,Civil and Structural Engineering - Published
- 2022
7. Association of exposure to deoxynivalenol with DNA methylation in white blood cells in children in China
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Pei Cao, H. Yang, Lei Zhang, Jiang Liang, J.F. Sun, Xiaodan Wang, P.P. Zhou, and Haibin Xu
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medicine.medical_specialty ,White (horse) ,Dietary exposure ,business.industry ,Public health ,Public Health, Environmental and Occupational Health ,Physiology ,Methylation ,Toxicology ,chemistry.chemical_compound ,chemistry ,DNA methylation ,Medicine ,Epigenetics ,business ,Mycotoxin ,Food Science - Abstract
Deoxynivalenol (DON) is a mycotoxin that commonly contaminates cereals worldwide. Dietary exposure to DON is a subject of great public health concern, but studies on the health effects of chronic exposure to DON are not available. In this study, we investigated the connection between DNA methylation levels and DON exposure in children. The DNA methylation status of white blood cells from 32 children aged 2~15 years old in Henan, China, was profiled. A total of 378 differentially methylated CpGs were identified between the high and low DON exposure groups, and 8 KEGG pathways were found to be significantly enriched among the differentially methylated genes. In addition, the quantitative methylation of EIF2AK4, EMID2 and GNASAS was analysed using the Sequenom MassARRAY platform. The results showed that the methylation level of EIF2AK4 was significantly different between the two groups, and the methylation levels were associated with exposure to DON. Conclusively, our study found that chronic exposure to DON during childhood could affect DNA methylation levels.
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- 2022
8. Design and application of ventilation and cooling systems for high geotemperature tunnels
- Author
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Haibin Xu, Shaoqiang Zhang, Chenchen Jiang, Weiyu Tang, and Ping Zhang
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- 2023
9. Development of multi-channel whole-air sampling equipment onboard an unmanned aerial vehicle for investigating volatile organic compounds' vertical distribution in the planetary boundary layer
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Suding Yang, Xin Li, Limin Zeng, Xuena Yu, Ying Liu, Sihua Lu, Xiaofeng Huang, Dongmei Zhang, Haibin Xu, Shuchen Lin, Hefan Liu, Miao Feng, Danlin Song, Qinwen Tan, Jinhui Cui, Lifan Wang, Ying Chen, Wenjie Wang, Haijiong Sun, Mengdi Song, Liuwei Kong, Yi Liu, Linhui Wei, Xianwu Zhu, and Yuanhang Zhang
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Atmospheric Science - Abstract
To achieve near-continuous vertical observations of volatile organic compounds (VOCs) in the planetary boundary layer (PBL), multi-channel whole-air sampling equipment onboard an unmanned aerial vehicle (UAV) platform was developed in this study. The equipment consists of a multi-position solenoid valve and specially designed lightweight quartz sampling canisters. The canisters have little adsorption loss of VOCs and good inter-canister reproducibility. The 7 d recovery test shows that most VOC species (97 %) had a 1-week decay within 20 %. Online instruments for measuring O3, NO2, CO, SO2, and meteorological parameters are also integrated into the UAV platform. During one take-off and landing, the UAV platform can reach 800 m above the ground within 40 min and take whole-air samples at six heights. Vertical profiles of VOCs and trace gases during the evolution of the PBL in south-western China are successfully obtained by deploying the newly developed UAV system.
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- 2023
10. Experimental Study on Load-Transfer Mechanism and Failure Mode of Batter Pile under Oblique Uplift Loading
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Kaiyuan Liu, Chengshun Xu, Haibin Xu, Wenlong Zhu, and Zhibao Nie
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Soil Science - Published
- 2022
11. Characterization of biliary microbiota dysbiosis in acute cholecystitis: A reduction in the biodiversity of the bile microbiome
- Author
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Danfeng Shen, Jingjing Xu, Peng Chang, Haibin Xu, Zhiqiang Zhu, and Ye Shen
- Abstract
Background Previous studies have shown that bacterial infections are closely associated with most common biliary diseases, such as biliary tract infection and gallbladder stone formation. Acute cholecystitis usually occurs in patients with acute infections of the biliary system, and severe infections can easily lead to life-threatening sepsis. This study explored the structural differences in the bile microbiome in patients with acute and chronic cholecystitis and the relationship with acute and chronic cholecystitis. Results A total of 18 patients in the acute cholecystitis group and 8 patients in the control group were enrolled in the analysis. The composition of the biliary microbiota significantly differed between acute cholecystitis patients and chronic cholecystitis controls. Principal coordinate analysis (PCoA) and principal component analysis (PCA) revealed that the microbial communities obtained from the chronic cholecystitis controls clustered separately from those from the acute cholecystitis patients. We observed that many kinds of bacteria, such as Burkholderia, Bradyrhizobium, Phreatobacter and Comamonas, were significantly higher in chronic cholecystitis controls than in acute cholecystitis patients. Conclusions The diversity of the bile microbiome in patients with acute cholecystitis is lower than that in patients with chronic cholecystitis. Patients with acute cholecystitis may have a bile microbial imbalance that might related to acute infections.
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- 2022
12. Development of multi-channel whole-air sampling equipment onboard unmanned aerial vehicle for investigating VOCs vertical distribution in the planetary boundary layer
- Author
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Suding Yang, Xin Li, Limin Zeng, Xuena Yu, Ying Liu, Sihua Lu, Xiaofeng Huang, Dongmei Zhang, Haibin Xu, Shuchen Lin, Jinhui Cui, Lifan Wang, Ying Chen, Wenjie Wang, Mengdi Song, Liuwei Kong, Yi Liu, Linhui Wei, Xianwu Zhu, and Yuanhang Zhang
- Abstract
To achieve near-continuous vertical observations of volatile organic compounds (VOCs) in the planetary boundary layer (PBL), multi-channel whole-air sampling equipment onboard an unmanned aerial vehicle (UAV) platform was developed in this study. The equipment consists of a multi-position solenoid valve and specially designed lightweight quartz sampling canisters. The canisters have little adsorption loss of VOCs and good inter-canister reproducibility. The 7-day recovery test shows that most VOC species (97 %) had a one-week decay within 20 %. Online instruments for measuring O3, NO2, CO, SO2, and meteorological parameters are also integrated into the UAV platform. During one take-off and landing, the UAV platform can reach 800 m above the ground within 40 min and take whole-air samples at six heights. Vertical profiles of VOCs and trace gases during the evolution of the PBL in southwest China are successfully obtained by deploying the newly developed UAV system.
- Published
- 2022
13. Supplementary material to 'Development of multi-channel whole-air sampling equipment onboard unmanned aerial vehicle for investigating VOCs vertical distribution in the planetary boundary layer'
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Suding Yang, Xin Li, Limin Zeng, Xuena Yu, Ying Liu, Sihua Lu, Xiaofeng Huang, Dongmei Zhang, Haibin Xu, Shuchen Lin, Jinhui Cui, Lifan Wang, Ying Chen, Wenjie Wang, Mengdi Song, Liuwei Kong, Yi Liu, Linhui Wei, Xianwu Zhu, and Yuanhang Zhang
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- 2022
14. Genomic survey of TCP transcription factors in plants: Phylogenomics, evolution and their biology
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Haiying Zhou, Delight Hwarari, Hongyu Ma, Haibin Xu, Liming Yang, and Yuming Luo
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Genetics ,Molecular Medicine ,Genetics (clinical) - Abstract
The TEOSINTE BRANCHED1 (TBI1), CYCLOIDEA (CYC), and PROLIFERATING CELL NUCLEAR ANTIGEN FACTORS (PCF1 and PCF2) proteins truncated as TCP transcription factors carry conserved basic-helix-loop-helix (bHLH) structure, related to DNA binding functions. Evolutionary history of the TCP genes has shown their presence in early land plants. In this paper, we performed a comparative discussion on the current knowledge of the TCP Transcription Factors in lower and higher plants: their evolutionary history based on the phylogenetics of 849 TCP proteins from 37 plant species, duplication events, and biochemical roles in some of the plants species. Phylogenetics investigations confirmed the classification of TCP TFs into Class I (the PCF1/2), and Class II (the C- clade) factors; the Class II factors were further divided into the CIN- and CYC/TB1- subclade. A trace in the evolution of the TCP Factors revealed an absence of the CYC/TB1subclade in lower plants, and an independent evolution of the CYC/TB1subclade in both eudicot and monocot species. 54% of the total duplication events analyzed were biased towards the dispersed duplication, and we concluded that dispersed duplication events contributed to the expansion of the TCP gene family. Analysis in the TCP factors functional roles confirmed their involvement in various biochemical processes which mainly included promoting cell proliferation in leaves in Class I TCPs, and cell division during plant development in Class II TCP Factors. Apart from growth and development, the TCP Factors were also shown to regulate hormonal and stress response pathways. Although this paper does not exhaust the present knowledge of the TCP Transcription Factors, it provides a base for further exploration of the gene family.
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- 2022
15. A bioactive injectable self-healing anti-inflammatory hydrogel with ultralong extracellular vesicles release synergistically enhances motor functional recovery of spinal cord injury
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Jingkai Wang, Fangcai Li, Chao Yu, Chengzhen Liang, Kaishun Xia, Shining Xiao, Qixin Chen, Min Wang, Bo Lei, Feng Cheng, Chenggui Wang, Liwei Ying, Kesi Shi, and Haibin Xu
- Subjects
QH301-705.5 ,0206 medical engineering ,Central nervous system ,Extracellular vesicles release ,Biomedical Engineering ,02 engineering and technology ,Article ,Biomaterials ,Paracrine signalling ,medicine ,Remyelination ,Biology (General) ,Spinal cord injury ,Bioactive biomaterials ,Materials of engineering and construction. Mechanics of materials ,Chemistry ,Regeneration (biology) ,Mesenchymal stem cell ,Extracellular vesicle ,Spinal cord injury repair ,021001 nanoscience & nanotechnology ,medicine.disease ,020601 biomedical engineering ,Cell biology ,Transplantation ,medicine.anatomical_structure ,Multifunctional hydrogel ,TA401-492 ,0210 nano-technology ,Biotechnology - Abstract
The repair and motor functional recovery after spinal cord injury (SCI) remains a worldwide challenge. The inflammatory microenvironment is one of main obstacles on inhibiting the recovery of SCI. Using mesenchymal stem cells (MSCs) derived extracellular vesicles to replace MSCs transplantation and mimic cell paracrine secretions provides a potential strategy for microenvironment regulation. However, the effective preservation and controlled release of extracellular vesicles in the injured spinal cord tissue are still not satisfied. Herein, we fabricated an injectable adhesive anti-inflammatory F127-polycitrate-polyethyleneimine hydrogel (FE) with sustainable and long term extracellular vesicle release (FE@EVs) for improving motor functional recovery after SCI. The orthotopic injection of FE@EVs hydrogel could encapsulate extracellular vesicles on the injured spinal cord, thereby synergistically induce efficient integrated regulation through suppressing fibrotic scar formation, reducing inflammatory reaction, promoting remyelination and axonal regeneration. This study showed that combining extracellular vesicles into bioactive multifunctional hydrogel should have great potential in achieving satisfactory locomotor recovery of central nervous system diseases., Graphical abstract Image 1, Highlights • The novel FE hydrogel was designed for encapsulating the extracellular vesicles (FE@EVs). • FE hydrogel exert the capabilities of temperature-responsive, injectable, adhesive and biocompatible. • FE hydrogel with sustainable and long-term extracellular vesicle release for improving motor functional recovery after SCI. • FE@EVs plays a vital role in pathological process of spinal cord injury in rats.
- Published
- 2021
16. Swelling-Mediated Mechanical Stimulation Regulates Differentiation of Adipose-Derived Mesenchymal Stem Cells for Intervertebral Disc Repair Using Injectable UCST Microgels
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Xianpeng Huang, Di Chen, Chengzhen Liang, Kesi Shi, Xiaopeng Zhou, Yuang Zhang, Yi Li, Jiangjie Chen, Kaishun Xia, Jiawei Shu, Biao Yang, Jingkai Wang, Haibin Xu, Chao Yu, Feng Cheng, Shaoke Wang, Yongxiang Zhang, Chenggui Wang, Liwei Ying, Hao Li, Meiling Han, Fangcai Li, Yiqing Tao, Qian Zhao, and Qixin Chen
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Biomaterials ,Biomedical Engineering ,Pharmaceutical Science - Abstract
Mechanical stimulation is an effective approach for controlling stem cell differentiation in tissue engineering. However, its realization in in vivo tissue repair remains challenging since this type of stimulation can hardly be applied to injectable seeding systems. Here, it is presented that swelling of injectable microgels can be transformed to in situ mechanical stimulation via stretching the cells adhered on their surface. Poly(acrylamide-co-acrylic acid) microgels with the upper critical solution temperature property are fabricated using inverse emulsion polymerization and further coated with polydopamine to increase cell adhesion. Adipose-derived mesenchymal stem cells (ADSCs) adhered on the microgels can be omnidirectionally stretched along with the responsive swelling of the microgels, which upregulate TRPV4 and Piezo1 channel proteins and enhance nucleus pulposus (NP)-like differentiation of ADSCs. In vivo experiments reveal that the disc height and extracellular matrix content of NP are promoted after the implantation with the microgels. The findings indicate that swelling-induced mechanical stimulation has great potential for regulating stem cell differentiation during intervertebral disc repair.
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- 2022
17. Effectiveness of adjuvant chemotherapy for elderly patients with triple-negative breast cancer
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Qiusheng Guo, Tian Lan, Yunyan Lu, Zujian Hu, Haibin Xu, Xiaojia Wang, Xiying Shao, and Xueyan Fu
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General Medicine - Abstract
There is little evidence determining whether elderly patients (from 70 to 90 years old) with triple-negative breast cancer could benefit from adjuvant chemotherapy (AC). This study explores the effect of AC in these population following surgery. A total of 4610 patients were identified in the Surveillance, Epidemiology, and End Results database (2010-2018). Multiple imputation by chained equations was performed to impute missing data. Inverse probability of treatment weighting (IPTW) was applied to reduce the selection bias. IPTW-adjusted Kaplan-Meiers survival analysis and Cox proportional hazards models were performed to compare breast cancer specific survival (BCSS) and overall survival (OS) in the two treatment groups. The patients were classified into the chemotherapy (n=1989) and the observation (n=2621) groups. The percentage of patients receiving AC versus observation increased significantly from 2010 to 2018 (estimated annual percentage change, 1.49%; 95%CI, 0.75-2.16%, p=0.002). The 5-year IPTW-adjusted rates of BCSS and OS in AC group were better than that in observation group (BCSS: 82.32% vs. 78.42%, p=0.010; OS: 75.54% vs. 64.65%, p0.050). In conclusion, we presented a BCSS and OS benefit from AC in elderly patients with triple-negative breast cancer (TNBC). AC remained a reasonable treatment approach in these specific patients. For the patients with T1ab, de-escalated treatment would be administrated with caution.
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- 2022
18. Biodegradable intramedullary nail (BIN) with high-strength bioceramics for bone fracture
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Xiaofu Yang, Mengfei Yu, Miao Sun, Haibin Xu, An Liu, Mingyi Dong, Jiaxing Gong, Yong He, Huifeng Shao, Zhongru Gou, and Huiming Wang
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Materials science ,Surface Properties ,Long bone ,Nonunion ,Biomedical Engineering ,Biocompatible Materials ,02 engineering and technology ,Bin ,law.invention ,Intramedullary rod ,Fractures, Bone ,03 medical and health sciences ,Flexural strength ,law ,Materials Testing ,Fracture fixation ,medicine ,Animals ,General Materials Science ,Particle Size ,Cells, Cultured ,030304 developmental biology ,0303 health sciences ,General Chemistry ,General Medicine ,Bone fracture ,Stress shielding ,021001 nanoscience & nanotechnology ,medicine.disease ,Fracture Fixation, Intramedullary ,Rats ,medicine.anatomical_structure ,Stress, Mechanical ,0210 nano-technology ,Biomedical engineering - Abstract
About 10 million fractures occur worldwide each year, of which more than 60% are long bone fractures. It is generally agreed that intramedullary nails have significant advantages in rigid fracture fixation. Metal intramedullary nails (INs) can provide strong support but a stress shielding effect can occur that results in nonunion healing in clinic. Nondegradable metals also need to be removed by a second operation. Could INs be biodegradable and used to overcome this issue? As current degradable biomaterials always suffer from low strength and cannot be used in Ins, herein, we report a novel device consisting of biodegradable IN (BIN) made for the first time with bioceramics. These BINs have an extremely high bending strength and stable internal and external structure. Experiments show that the BINs could not only fix and support the tibial fracture model, but also promote osteogenesis and affect the microenvironment of the bone marrow cavity. Therefore, they could be expected to replace traditional metal IN and become a more effective treatment option for tibial fractures.
- Published
- 2021
19. Behaviors and group effects of pile composite foundation under lateral load
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Haibin Xu, Shaoqiang Zhang, Wenqiang Li, Zhensheng Cao, and Kaiyu Jiang
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General Engineering - Published
- 2023
20. Abstract P1-01-01: The Role of Adjuvant Chemotherapy for Elderly Women with Triple-Negative Breast Cancer
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Tian Lan, Qiusheng Guo, Yunyan Lu, Junwei Gu, Xiying Shao, Haibin Xu, and Zujian Hu
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Cancer Research ,Oncology - Abstract
Purpose: There is little evidence determining whether elderly patients (from 70 to 90 years old) with triple-negative breast cancer (TNBC) could benefit from adjuvant chemotherapy (AC). The objective of this study was to explore the effect of AC in these population following surgery. Methods: A total of 4610 patients were identified in the Surveillance, Epidemiology, and End Results database (2010-2018). Inverse probability of treatment weighting (IPTW) was used to reduce the selection bias. IPTW-adjusted Kaplan-Meiers survival analysis and Cox proportional hazards models were performed to compare breast cancer specific survival (BCSS) and overall survival (OS) in the two different treatment groups. Results: All eligible patients were divided into two groups, the chemotherapy (n=1989) and the observation (n=2621) groups. The percentage of patients receiving AC versus observation increased significantly from 2010 to 2018 (estimated annual percentage change, 1.49%; 95%CI, 0.75-2.16%, p=0.002). The 5-year IPTW-adjusted rates of BCSS and OS in AC group were better than that in observation group (BCSS: 82.32% vs. 78.42%, p=0.010; OS: 75.54% vs. 64.65%, p< 0.001). In IPTW-adjusted Cox proportional hazards regression analysis, elderly patients could benefit from AC (BCSS: HR, 0.77, 95%CI, 0.62-0.94, p=0.012; OS: HR, 0.66, 95%CI, 0.57-0.78, p< 0.001). AC was associated with a significant outcome benefit across year at diagnosis, marital status, stage, lymph node, surgery and radiation subgroups (all p< 0.05). Patients with T1ab could not benefit from AC. Conclusions: We show a BCSS and OS benefit from AC in old patients with TNBC. AC may remain a reasonable treatment approach in these specific patients. For the patients with T1ab, de-escalated treatment should be administrated with caution. It requires further randomized controlled trial to ensure the AC effectiveness for elderly TNBC patients. Citation Format: Tian Lan, Qiusheng Guo, Yunyan Lu, Junwei Gu, Xiying Shao, Haibin Xu, Zujian Hu. The Role of Adjuvant Chemotherapy for Elderly Women with Triple-Negative Breast Cancer [abstract]. In: Proceedings of the 2022 San Antonio Breast Cancer Symposium; 2022 Dec 6-10; San Antonio, TX. Philadelphia (PA): AACR; Cancer Res 2023;83(5 Suppl):Abstract nr P1-01-01.
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- 2023
21. Single-cell whole-genome sequencing, haplotype analysis in prenatal diagnosis of monogenic diseases
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Liang Chang, Haining Jiao, Jiucheng Chen, Guanlin Wu, Ping Liu, Rong Li, Jianying Guo, Wenqing Long, Xiaojian Tang, Bingjie Lu, Haibin Xu, and Han Wu
- Subjects
Ecology ,Health, Toxicology and Mutagenesis ,Plant Science ,Biochemistry, Genetics and Molecular Biology (miscellaneous) - Abstract
Monogenic inherited diseases are common causes of congenital disabilities, leading to severe economic and mental burdens on affected families. In our previous study, we demonstrated the validity of cell-based noninvasive prenatal testing (cbNIPT) in prenatal diagnosis by single-cell targeted sequencing. The present research further explored the feasibility of single-cell whole-genome sequencing (WGS) and haplotype analysis of various monogenic diseases with cbNIPT. Four families were recruited: one with inherited deafness, one with hemophilia, one with large vestibular aqueduct syndrome (LVAS), and one with no disease. Circulating trophoblast cells (cTBs) were obtained from maternal blood and analyzed by single-cell 15X WGS. Haplotype analysis showed that CFC178 (deafness family), CFC616 (hemophilia family), and CFC111 (LVAS family) inherited haplotypes from paternal and/or maternal pathogenic loci. Amniotic fluid or fetal villi samples from the deafness and hemophilia families confirmed these results. WGS performed better than targeted sequencing in genome coverage, allele dropout (ADO), and false-positive (FP) ratios. Our findings suggest that cbNIPT by WGS and haplotype analysis have great potential for use in prenatally diagnosing various monogenic diseases.
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- 2023
22. Near telomere-to-telomere nuclear phased chromosomes of the dikaryotic wheat fungus Rhizoctonia cerealis
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Qingdong Zeng, Wenjin Cao, Wei Li, Jianhui Wu, Melania Figueroa, Huiquan Liu, Guowei Qin, Qinhu Wang, Liming Yang, Yan Zhou, Yunxin Yu, Lin Huang, Shengjie Liu, Yuming Luo, Zhiying Mu, Xiang Li, Jiajie Liu, Xiaoting Wang, Changfa Wang, Fengping Yuan, Huaigu Chen, Haibin Xu, Peter N. Dodds, Dejun Han, and Zhensheng Kang
- Abstract
Rhizoctonia cerealis (Rce), which causes sharp eyespot, is one of the most destructive wheat pathogens. However, the genetic and molecular virulence mechanisms of Rce have not been elucidated. As a dikaryotic organism, the haplotype phasing of this fungus has not been completed so far. We applied a haplotype phasing algorithm to generate a high-quality near telomere-to-telomere nuclear-phased genome sequence of Rce strain R0301. Sixteen pairs of chromosomes were assigned to the A and B genomes with a total size of 83 Mb. Based on a dual-time course RNA-seq, 25308 genes were predicted. Genes for steroid biosynthesis and starch and sucrose metabolism were significantly enriched, together with many genes encoding carbohydrate-active enzymes (CAZymes) and secreted effector proteins, which should be involved in infection of wheat plants. Population genomic analysis of 31 isolates collected in China during the last forty years suggests that this population has not undergone substantial differentiation over time.ImportanceThe finished genome reference is the basis of revealing pathogens’ biology base. Many efforts have been made to produce the chromosome-scale assembly of fungi. However, the reference of many pathogenic fungi is highly fragmented, which prevents the analysis of genome structure variation, evolution and import pathogenicity genes. Here, we assembly the only chromosome-scale haplotype-phased reference of dikaryotic fungus so far. This assembly achieves the gold standard based on many evaluation software, which indicates that the pipeline developed in this study can be applied to assemble references for other dikaryotic organisms. This work can also promote the research on the globe’s destructive wheat pathogens, sharp eyespot, caused by R. cerealis.
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- 2022
23. Genetically Modified Food
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Haibin Xu
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- 2022
24. A Atractylodes lancea polysaccharide inhibits metastasis of human osteosarcoma U‐2 OS cells by blocking sialyl Lewis X (sLex)/E‐selectin binding
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Suping Bai, Haibin Xu, Kaihua Zhong, Shuxin Fan, and Shujun Yao
- Subjects
0301 basic medicine ,musculoskeletal diseases ,Umbilical vein ,U‐2 OS human osteosarcoma cells ,Flow cytometry ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,sialyl Lewis X (sLex)/E‐selectin ,Antigen ,Annexin ,Cell Movement ,Polysaccharides ,Cell Line, Tumor ,E-selectin ,medicine ,Cell Adhesion ,Human Umbilical Vein Endothelial Cells ,metastasis ,Humans ,Neoplasm Metastasis ,Sialyl Lewis X Antigen ,Osteosarcoma ,biology ,medicine.diagnostic_test ,Tumor Necrosis Factor-alpha ,Cell Membrane ,Monosaccharides ,apoptosis ,Cell Biology ,Original Articles ,Atractylodes lancea ,Atractylodes ,biology.organism_classification ,Molecular biology ,030104 developmental biology ,Sialyl-Lewis X ,chemistry ,Apoptosis ,030220 oncology & carcinogenesis ,polysaccharide ,biology.protein ,Molecular Medicine ,Original Article ,E-Selectin ,Protein Binding - Abstract
In this study, a new water and alkaline‐soluble polysaccharide (ALP), with an average molecular weight of 6.63 × 104 Da, was successfully purified from the rhizomes of Atractylodes lancea. GC analysis demonstrated that ALP was a kind of glucan. The effect of the ALP on the interaction between E‐selectin and sialyl Lewis X (sLex) was examined in human osteosarcoma U‐2 OS cells. It was obvious that the expression of sLex antigen on the surface of U‐2 OS cells was visible under fluorescence microscopy. The addition of ALP (0.5, 1 and 2 mg/mL) resulted in a marked inhibition on the adhesion, migration and invasion of U‐2 OS cells to human umbilical vein endothelial cells (HUVECs), which was achieved by the decreased sLex expression on U‐2 OS cells. Additionally, the induction of apoptosis can be observed in U‐2 OS cells following ALP treatment using TUNEL staining and Annexin V‐FITC/PI double‐staining analysis on flow cytometry. In conclusion, these results indicated that ALP exerted anti‐metastatic activity towards osteosarcoma cells via inhibition of sLex/E‐selectin binding, which suggested that ALP could be a potent agent for human osteosarcoma intervention.
- Published
- 2020
25. Risk assessment and spatial analysis of deoxynivalenol exposure in Chinese population
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Xiaodan Wang, Lishi Zhang, Mei Qin, Dajin Yang, Haibin Xu, and Lei Zhang
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Adult ,China ,Adolescent ,Wheat flour ,Food Contamination ,Biology ,Toxicology ,Disease cluster ,Risk Assessment ,01 natural sciences ,Microbiology ,Dietary Exposure ,Young Adult ,03 medical and health sciences ,chemistry.chemical_compound ,Limit of Detection ,Humans ,Public Health Surveillance ,Child ,Mycotoxin ,Exposure assessment ,0303 health sciences ,business.industry ,030302 biochemistry & molecular biology ,010401 analytical chemistry ,food and beverages ,Acetylation ,Staple food ,Environmental Exposure ,Middle Aged ,Mycotoxins ,Food safety ,0104 chemical sciences ,chemistry ,Child, Preschool ,Population Surveillance ,Edible Grain ,Trichothecenes ,Risk assessment ,business ,Hazard Analysis and Critical Control Points ,Biotechnology - Abstract
Deoxynivalenol (DON) is one of the most commonly found mycotoxins across the world, and it mainly contaminates staple food crops. This study aims to evaluate the dietary exposure of DON and to provide a geographical profile of DON exposure in China. The concentrations of DON and its acetylated derivatives in 15,004 cereal samples (10,192 wheat flour, 1750 maize meal, 892 oat flakes, and 2170 polished rice) were collected from 30 provinces, autonomous regions, or municipalities across China during 2010-2017, through a national food safety risk surveillance system. The consumption data for cereals were obtained from China National Nutrition and Health Survey in 2002, and 67,923 respondents from the same 30 regions were included in the analysis. Among all the cereals considered, the concentration was the highest in wheat flour, with the mean concentration of 250.8 μg/kg. Applying a worst-case scenario, some individuals were possibly at risk, but the probability of acute effects was low. The mean and median exposure for the entire population was 0.61 and 0.36 μg/kg bw/day, respectively, below the (PM) TDI, indicating an acceptable overall health risk in Chinese population. Wheat contributed to 86% of the total DON exposure. Significant discrepancy was observed between the exposure and the contamination of DON. The high-exposure cluster area was in northern China, whilst the most seriously contaminated regions were all located in the southeast, which formed a seriously contaminated area.
- Published
- 2020
26. Genome Sequence and Comparative Analysis of Colletotrichum gloeosporioides Isolated from Liriodendron Leaves
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Yanli Tian, Haibin Xu, Guibin Wang, Liang-Jiao Xue, Zhaodong Hao, Guoyu Wei, Pengkai Wang, Fang-Fang Fu, Baishi Hu, Jisen Shi, Ye Lu, Cheng Tielong, Jinhui Chen, and Yin Yi
- Subjects
0106 biological sciences ,Whole genome sequencing ,Genetics ,0303 health sciences ,Candidate gene ,Arginine biosynthetic process ,Plant Science ,Biology ,01 natural sciences ,Genome ,DNA sequencing ,03 medical and health sciences ,Polyketide synthase ,biology.protein ,Agronomy and Crop Science ,Gene ,030304 developmental biology ,010606 plant biology & botany ,Synteny - Abstract
Colletotrichum gloeosporioides is a hemibiotrophic pathogen causing significant losses to economically important crops and forest trees, including Liriodendron. To explore the interaction between C. gloeosporioides and Liriodendron and to identify the candidate genes determining the pathogenesis, we sequenced and assembled the whole genome of C. gloeosporioides Lc1 (CgLc1) using PacBio and Illumina next generation sequencing and performed a comparative genomic analysis between CgLc1 and Cg01, the latter being a described endophytic species of the C. gloeosporioides complex. Gene structure prediction identified 15,744 protein-coding genes and 837 noncoding RNAs. Species-specific genes were characterized using an ortholog analysis followed by a pathway enrichment analysis, which showed that genes specific to CgLc1 were enriched for the arginine biosynthetic process. Furthermore, genome synteny analysis revealed that most of the protein-coding genes fell into collinear blocks. However, two clusters of polyketide synthase genes were identified to be specific for CgLc1, suggesting that they might have an important role in virulence control. Transcriptional regulators coexpressed with polyketide synthase genes were detected through a Weighted Correlation Network Analysis. Taken together, this work provides new insight into the virulence- and pathogenesis-associated genes present in C. gloeosporioides and its possible lifestyle.
- Published
- 2020
27. Effects of rocking impedance and soil shear stress of the free-field on the dynamic response of an end-bearing pile during horizontal earthquakes
- Author
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Piguang Wang, Mi Zhao, Bu Zhang, Haibin Xu, and Xiuli Du
- Subjects
Geotechnical Engineering and Engineering Geology ,Computer Science Applications - Published
- 2022
28. Injectable exosome-functionalized extracellular matrix hydrogel for metabolism balance and pyroptosis regulation in intervertebral disc degeneration
- Author
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Zengjie Zhang, Xiaopeng Zhou, Qijiang Mao, Youlong Zhou, Hongyuan Xing, Shaojun Hu, Liwei Ying, Haibin Xu, Ning Zhang, and Chenggui Wang
- Subjects
Male ,Nucleus Pulposus ,Biomedical Engineering ,Pharmaceutical Science ,Medicine (miscellaneous) ,Bioengineering ,Matrix metalloproteinase ,Exosomes ,Applied Microbiology and Biotechnology ,Exosome ,Extracellular matrix ,Tissue engineering ,Matrix Metalloproteinase 13 ,Pyroptosis ,Medical technology ,Animals ,Humans ,R855-855.5 ,Chemistry ,Research ,Mesenchymal stem cell ,Hydrogels ,Mesenchymal Stem Cells ,Microvesicles ,Rats ,Cell biology ,MicroRNAs ,Drug delivery ,Molecular Medicine ,Intervertebral disc degeneration ,TP248.13-248.65 ,Biotechnology - Abstract
Exosome therapy is a promising therapeutic approach for intervertebral disc degeneration (IVDD) and achieves its therapeutic effects by regulating metabolic disorders, the microenvironment and cell homeostasis with the sustained release of microRNAs, proteins, and transcription factors. However, the rapid clearance and disruption of exosomes are the two major challenges for the application of exosome therapy in IVDD. Herein, a thermosensitive acellular extracellular matrix (ECM) hydrogel coupled with adipose-derived mesenchymal stem cell (ADSC) exosomes (dECM@exo) that inherits the superior properties of nucleus pulposus tissue and ADSCs was fabricated to ameliorate IVDD. This thermosensitive dECM@exo hydrogel system can provide not only in situ gelation to replenish ECM leakage in nucleus pulposus cells (NPCs) but also an environment for the growth of NPCs. In addition, sustained release of ADSC-derived exosomes from this system regulates matrix synthesis and degradation by regulating matrix metalloproteinases (MMPs) and inhibits pyroptosis by mitigating the inflammatory response in vitro. Animal results demonstrated that the dECM@exo hydrogel system maintained early IVD microenvironment homeostasis and ameliorated IVDD. This functional system can serve as a powerful platform for IVD drug delivery and biotherapy and an alternative therapy for IVDD. Supplementary Information The online version contains supplementary material available at 10.1186/s12951-021-00991-5.
- Published
- 2021
29. Metabolism Balance, Pyroptosis Regulation and Microenvironmental Protection by Exosomes Functioned as an Injectable Extracellular Matrix Hydrogel for Nucleus Pulposus Regeneration
- Author
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Shaojun Hu, Qijiang Mao, Youlong Zhou, Chenggui Wang, Zengjie Zhang, Xiaopeng Zhou, Liwei Ying, Haibin Xu, Ning Zhang, and Hongyuan Xing
- Subjects
Extracellular matrix ,medicine.anatomical_structure ,Chemistry ,Regeneration (biology) ,Pyroptosis ,medicine ,Metabolism ,Nucleus ,Microvesicles ,Cell biology - Abstract
Exosome therapy is a promising therapeutic approach for intervertebral disc degeneration (IVDD) through regulating metabolic disorders, the microenvironment and cell homeostasis with the sustained release of microRNAs, proteins, and transcription factors. However, the rapid clearance and disruption of exosomes are the two major challenges for its application in IVDD. Herein, a thermosensitive acellular extracellular matrix (ECM) hydrogel coupled with adipose-derived mesenchymal stem cell (ADSC) exosomes that inherited the superior properties of nucleus pulposus tissue and ADSCs was fabricated to ameliorate IVDD. This thermosensitive dECM@exo hydrogel system can not only provide in situ gelation to replenish ECM leakage in nucleus pulposus cells (NPCs) but also provide an environment for the growth of NPCs. In addition, sustained release of ADSC-derived exosomes from this system regulates matrix synthesis and degradation by regulating matrix metalloproteinases (MMPs) and inhibits pyroptosis by mitigating the inflammatory response in vitro. Animal results demonstrated that the dECM@Exo hydrogel system maintained early IVD microenvironment homeostasis and ameliorated IVDD. This functional system can serve as a powerful platform for IVD drug delivery and biotherapy and an alternative therapy for IVDD.
- Published
- 2021
30. Quantitative probabilistic assessment of caffeine intake from tea in Chinese adult consumers based on nationwide caffeine content determination and tea consumption survey
- Author
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Ling, Yong, Yan, Song, Xiao, Xiao, Haixia, Sui, Haibin, Xu, Rong, Tan, Xiufang, Yang, Jian, Song, Jianwen, Li, and Sheng, Wei
- Subjects
Adult ,Beverages ,Male ,Tea ,Caffeine ,Humans ,Female ,General Medicine ,Toxicology ,Coffee ,Camellia sinensis ,Food Science - Abstract
Caffeine has known effects on the central nervous and cardiovascular systems. An intake up to 400 mg/day does not give rise to health concerns. Tea, a major source of caffeine, is highly consumed in China. However, the potential health risk of caffeine from tea has not been well evaluated. The present study assessed caffeine intake levels from tea for Chinese adult consumers. We collected 1,398 samples of green, black, dark, jasmine, oolong, white, and yellow tea from 17 provinces. The caffeine content was determined by HPLC. The average contents were 27 (oolong tea) - 43 (yellow tea) mg/g. The leaching rate of caffeine into the water was about 100%. Tea consumption data were from the National Beverage Consumption Survey 2013-2014. Monte Carlo simulations were applied to estimate the distribution of caffeine intake. The average caffeine intake from tea was 180 mg/day of all consumers. Green, dark, and black tea were the primary sources. Males (197 mg/day) consumed more caffeine than females (136 mg/day) on average, but females older than 71 years had the highest intake level (259 mg/day) among all subgroups. Over 90% of Chinese adult tea drinkers have caffeine intake under 400 mg/day.
- Published
- 2022
31. Enhancement of nucleus pulposus repair by glycoengineered adipose-derived mesenchymal cells
- Author
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Liwei Ying, Chengzhen Liang, Yujie Zhang, Jingkai Wang, Chenggui Wang, Kaishun Xia, Kesi Shi, Chao Yu, Biao Yang, Haibin Xu, Yuang Zhang, Jiawei Shu, Xianpeng Huang, Hongyuan Xing, Fangcai Li, Xiaopeng Zhou, and Qixin Chen
- Subjects
Biomaterials ,Nucleus Pulposus ,Mechanics of Materials ,Biophysics ,Ceramics and Composites ,Adipocytes ,Bioengineering ,Cell Differentiation ,Mesenchymal Stem Cells ,Intervertebral Disc ,Cells, Cultured - Abstract
Adipose-derived mesenchymal stem cells (ADSCs) are promising candidates for repairing degenerated intervertebral discs through multiple means, including: i. Secretion of bioactive factors to regulate inflammation and, ii. The potential to differentiate into nucleus pulposus (NP)-like cells, which can integrate into host tissues. However, the differentiation ability of ADSCs to NP-like cells is limited, which emphasizes on the need for alternative approaches to regulate cell differentiations. Given that cell functions are influenced by interactions between the extracellular matrix (ECM) and cells, we hypothesize that cell surface modification promotes ADSCs adhesion and differentiation towards NP-like cells. In this study, cell surfaces of ADSCs were functionalized with unnatural sialic acid via metabolic glycoengineering. Subsequently, adhesion abilities of modified cells to three main ECM (laminin, collagen and fibronectin) were compared. The adhesion assay revealed that glycoengineered ADSCs had the highest affinity for collagen, compared to laminin and fibronectin. Moreover, cultures with collagen coated plates enhanced the differentiation of glycoengineered ADSCs to NP-like cells. Metabolic glycoengineering prolonged ADSCs viability. The glycoengineered ADSCs increased the height and elasticity of intervertebral discs, as well as the water content and ECM volumes of nucleus pulposus. In conclusion, metabolic glycoengineering of cell surfaces has a significant role in modulating cell biological functions and promoting NP tissue repair.
- Published
- 2021
32. Dietary intake assessment of caramel colours and their processing by-products 4-methylimidazole and 2-acetyl-4-tetrahydroxy-butylimidazole for the Chinese population
- Author
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Peng Gao, Pei Cao, Jiang Liang, Haibin Xu, Xiaodan Wang, and Ning Ma
- Subjects
Adult ,Male ,Adolescent ,Health, Toxicology and Mutagenesis ,Carbohydrates ,010502 geochemistry & geophysics ,Toxicology ,01 natural sciences ,Dietary Exposure ,Young Adult ,chemistry.chemical_compound ,Animals ,Humans ,Medicine ,4-Methylimidazole ,Food science ,Child ,0105 earth and related environmental sciences ,Chinese population ,business.industry ,Dietary intake ,010401 analytical chemistry ,Imidazoles ,Public Health, Environmental and Occupational Health ,Food Coloring Agents ,General Chemistry ,General Medicine ,Middle Aged ,Rats ,0104 chemical sciences ,chemistry ,Child, Preschool ,Female ,business ,Food Analysis ,Food Science ,Intake assessment - Abstract
The aim of the study was to assess the dietary intake of caramel colours and their by-products 4-methylimidazole (4-MEI) and 2-acetyl-4-tetrahydroxybutylimidazole (THI) for the Chinese population. Based on the typical and maximum reported use levels of caramel colours in 15 food categories, the dietary intakes of combined and single-class caramel colours of Classes I, III and IV were estimated with the food consumption data from the China National Nutrient and Health Survey. Using the mean values of 4-MEI and THI contents in Class III and Class IV Caramel colour samples, the exposures to 4-MEI and THI from dietary caramel colours were derived. The results showed that the combined and individual average dietary caramel colour intakes for the Chinese population of different age groups were estimated to be 232-60.3 mg kg
- Published
- 2019
33. A Preliminary Investigation of Naturally Occurring Aluminum in Grains, Vegetables, and Fruits from Some Areas of China and Dietary Intake Assessment
- Author
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Pei Cao, Ning Li, Xuxia Liang, Haibin Xu, Ning Ma, Xiaodan Wang, Jiang Liang, and Peng Gao
- Subjects
0303 health sciences ,education.field_of_study ,030309 nutrition & dietetics ,Dietary intake ,Population ,Food consumption ,food and beverages ,04 agricultural and veterinary sciences ,Biology ,040401 food science ,Bulb ,Food group ,03 medical and health sciences ,0404 agricultural biotechnology ,Nutrient ,Animal science ,Age groups ,Leafy vegetables ,education ,Food Science - Abstract
An investigation of the naturally occurring aluminum contents in grains, fruits and vegetables locally planted in some areas of China was conducted, and the aluminum dietary intake from the investigated food was estimated. A total of 2,469 samples were collected during 2013 to 2014 and tested for aluminum content using ICP-MS method. The results showed that although 77.6% of the samples contained aluminum less than 5 mg/kg, significant variations of aluminum contents were observed in different food groups. Generally, the aluminum contents were found to be relatively high in dried grains and fresh vegetables, and low in fresh fruits. The mean value of aluminum contents in grains was 6.3 mg/kg, with wheat being the highest, followed by soybean and corn. The fresh vegetables had an average aluminum content of 4.7 mg/kg, with leafy vegetables being the highest, followed by bulb and stem vegetables. Most varieties of fresh fruits were low in aluminum, with the mean of 1.3 mg/kg. Based on the food consumption data from the China National Nutrient and Health Survey, the average weekly dietary intake of naturally occurring aluminum from the investigated foods was estimated to be 0.62 mg/kg bw for the general population and 0.55 to 1.00 mg/kg bw for different age groups. Grains and vegetables were the main contributors to the overall intake. Evaluated against the provisional tolerable weekly intake (PTWI) of 2 mg/kg bw, the dietary naturally occurring aluminum intake from the investigated foods was considered to be no safety concern.
- Published
- 2019
34. Concentration of morpholine residues in major fruits and juices and its dietary exposure in China
- Author
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Ping-Gu Wu, Yunfeng Zhao, Xi-Mei Wu, Sheng Wen, Pei Cao, Haibin Xu, Jiang Liang, Si-Jie Liu, Jing Wei, and Da-Wei Chen
- Subjects
China ,Morpholines ,Health, Toxicology and Mutagenesis ,Fungal contamination ,Food Contamination ,Biology ,Toxicology ,01 natural sciences ,Dietary Exposure ,chemistry.chemical_compound ,0404 agricultural biotechnology ,Nutrient ,Morpholine ,Food science ,Orange juice ,Wax ,Chinese population ,Dietary exposure ,010401 analytical chemistry ,Public Health, Environmental and Occupational Health ,food and beverages ,04 agricultural and veterinary sciences ,General Chemistry ,General Medicine ,040401 food science ,Chemical used ,Diet ,0104 chemical sciences ,Fruit and Vegetable Juices ,chemistry ,Fruit ,visual_art ,visual_art.visual_art_medium ,Food Science - Abstract
Morpholine is a common chemical used as emulsifier in the preparation of wax coatings for some fruit to help them remain fresh and protect against insects and fungal contamination. It has been reported that morpholine has acute toxic effects on rodents. In the present study, morpholine concentrations were analysed in fruits (citrus fruits, apples, strawberries and grapes) and juices (apple juice and orange juice) in order to determine dietary exposure among the Chinese population. A total of 732 fruit and juice samples were collected during 2015-2016, which covered major foods in China. Fruit and juice consumption data were taken from China National Nutrient and Health Survey (2002) and include data from 16,407 fruit or juice consumers. It was found that mean dietary exposure to morpholine residues from fruits and/or juices for general Chinese consumers and children 2-6 years old were 0.42 and 1.24 µg/kg bw/day, respectively. The 97.5% intake in general Chinese consumers and children 2-6 years old were 2.25 and 6.90 µg/kg bw/day, respectively. The primary food sources of the morpholine dietary intake of general Chinese consumers were citrus fruits (57.4%) and apples (40.8%). These findings suggested that dietary exposure to morpholine in the Chinese population was lower than the acceptable daily intake of morpholine, and there are no health concerns.
- Published
- 2019
35. Oxidation protection of graphite materials by single-phase ultra-high temperature boride modified monolayer Si-SiC coating
- Author
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Yan Jiang, Quanxing Ren, Zhiliang Mao, Hongqiang Ru, and Haibin Xu
- Subjects
Materials science ,Scanning electron microscope ,Oxide ,02 engineering and technology ,engineering.material ,01 natural sciences ,chemistry.chemical_compound ,stomatognathic system ,Coating ,Boride ,Phenol formaldehyde resin ,0103 physical sciences ,Materials Chemistry ,Graphite ,010302 applied physics ,chemistry.chemical_classification ,Process Chemistry and Technology ,021001 nanoscience & nanotechnology ,Microstructure ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,chemistry ,Chemical engineering ,Ceramics and Composites ,engineering ,0210 nano-technology ,Pyrolysis - Abstract
To improve the oxidation resistance of Si-SiC coating, single-phase ultra-high temperature boride (ZrB 2 or TaB 2 ) modified Si-SiC coating was designed and established on graphite substrates by combination of dipping and reactive infiltration process. ZrB 2 or TaB 2 phase was introduced in Si-SiC coating by directly mixing raw materials and phenol formaldehyde resin in the slurry, and then the ZrB 2 -SiC-Si and TaB 2 -SiC-Si coatings were fabricated on the graphite samples by dipping-curing, pyrolysis, and siliconizing. The crystalline phases and microstructure of the as-obtained multiphase coatings were investigated by X-ray diffraction analysis and scanning electron microscopy. The interrupted oxidation tests from room-temperature to 1500 °C were conducted to assess the anti-oxidation property of the prepared coatings. After 1200 h of oxidation at 1500 °C in air (30 times thermal cycles), the mass losses of the graphite substrates coated with ZrB 2 -SiC-Si and TaB 2 -SiC-Si coatings were 0.086% and 0.537%, respectively, and the high-temperature stability of the modified coatings was greatly improved compared to the Si-SiC coating. The excellent anti-oxidation performances of the compound coatings were attributed to the compact structure of the coatings and the formation of compound oxide layers covering on the surfaces. The compound Zr-Si-O and Ta-Si-O films possessed low oxygen diffusion rate and appropriate viscosity, which can provide appreciable oxidation protection for the internal coatings, thus obtaining the excellent oxidation and spallation resistance property.
- Published
- 2019
36. The population characteristic analysis in RecurIndex for clinical decision-making on adjuvant therapy for early breast cancer: Results of a real-world study
- Author
-
Xiaojia Wang, Lei Lei, Peifen Fu, Ouchen Wang, Xiaohong Xie, Haibin Xu, Weiliang Feng, Hongjian Yang, Guinv Hu, Shuguang Li, Zhijun Dai, Guilong Guo, Xiaoai Lv, Ya-bing Zheng, Zhan-hong Chen, and Xi-Ying Shao
- Subjects
Cancer Research ,Oncology - Abstract
e12514 Background: 28-gene signature (RecurIndex) is the first multi-gene panel for recurrence risk prediction after surgery developed from the Asian breast cancer population. In this study, we aimed to report the clinical and genomic characteristics of Chinese early-stage breast cancer patients whose primary lesions have been evaluated by 28-gene signature testing. Methods: In this study, 363 patients were assessed by 28-gene signatures between November 2019 and August 2021. Of these, 330 (90.9%) had stage I-II, hormone receptor-positive, HER2-negative breast cancer, 16 (4.4%) had triple-negative breast cancer (TNBC), and 17 (4.7%) had HER2-enriched breast cancer. The genomic risks of local and distant recurrence were determined by 28-gene signature respectively; the clinical risk was evaluated by the modified Adjuvant! Online. The molecular subtyping of the 28-gene signature was also compared with immunohistochemistry (IHC) status. In the future analysis, we will report the clinical decisions and outcomes of these patients. Results: The 28-gene signature classified 86.8% (n = 315/363) of patients as genomic Low Risk (LR) and 13.2% (n = 48/363) as genomic High Risk (HR) for local recurrence; 83.7% (n = 304/363) and 16.3% (n = 59/363) for distant recurrence. Among clinical HR patient, a total of 72 patients (64.9%) were deemed to be genomic LR of distant recurrence, and a total of 88 patients (79.3%) were deemed to be genomic LR of local recurrence. The concordance of luminal type identified by IHC or 28-gene based molecular subtyping was 99.1% (n = 327/330); TNBC type was 25% (n = 4/16), and HER2 enriched was 70.6% (n = 12/17). Conclusions: This study showed that in clinical HR patients, 64.9% 28-gene LR patients who could waive their adjuvant chemotherapy and 79.3% who could have the adjuvant radiotherapy adjusted. Additionally, the results of IHC and 28-gene signature-based molecular subtyping were highly consistent in luminal type, while the potential value of TNBC and HER2 enriched subtyping identified by the 28-gene signature needs to be further explored in the future.[Table: see text]
- Published
- 2022
37. PCV2 infection aggravates OTA-induced immunotoxicity in vivo and in vitro
- Author
-
Fang, Gan, Lili, Hou, Haibin, Xu, Yunhuan, Liu, Xingxiang, Chen, and Kehe, Huang
- Subjects
Circovirus ,Swine ,Health, Toxicology and Mutagenesis ,Macrophages, Alveolar ,Public Health, Environmental and Occupational Health ,Animals ,General Medicine ,Ochratoxins ,Pollution ,Signal Transduction - Abstract
Ochratoxin A (OTA), frequently existing in the food and feeds, could induce immunotoxicity. Porcine circovirus type 2 (PCV2), as a primary causative agent of porcine circovirus-associated disease, also could induce immunosuppression. However, it is still unknown whether PCV2 infection impacts OTA-induced immunotoxicity. The pigs and porcine alveolar macrophages (PAMs) were used as the model in the present experiment. The results in vivo indicated that PCV2 infection exacerbated OTA-induced immunotoxicity, NF-κB p65 phosphorylation, and TLR4 and MyD88 mRNA and protein expression in spleen. The results in vitro showed that OTA at 7.0 and 9.0 μM decreased cell viability and increased LDH release of PAMs without PCV2 infection. However, with PCV2 infection, OTA at 5.0, 7.0 and 9.0 μM significantly decreased cell viability and increased LDH release compared with absence of PCV2 infection. In addition, OTA at 5.0 and 7.0 μM significantly increased Annexin V/PI-positive rate, apoptosis of nuclear, γ-H2AX foci, IL-1α and TNF-α expression in PAMs with PCV2 infection compared with absence of PCV2 infection. In addition, PCV2 infection enhanced OTA-induced TLR4 and MyD88 mRNA and protein expression and NF-κB p65 phosphorylation. Knockdown of TLR4 alleviated the exacerbating effects of PCV2 infection on OTA-induced cytotoxicity, apoptosis and DNA damage in PAMs. These results indicated that PCV2 infection aggravated OTA-induced immunotoxicity and reduced the dose of OTA-induced immunotoxicity via TLR4/NF-κB p65 signaling pathway, which could provide basis for establishing limits for OTA.
- Published
- 2022
38. The u-p analytical solution for impedances of saturated soil to a laterally vibrating pile considering radial inhomogeneity
- Author
-
Xiaoling Zhang, Yingduo Xu, Piguang Wang, Haibin Xu, and Xiuli Du
- Subjects
Soil Science ,Geotechnical Engineering and Engineering Geology ,Civil and Structural Engineering - Published
- 2022
39. Liriodendron genome sheds light on angiosperm phylogeny and species–pair differentiation
- Author
-
Pengkai Wang, Liang-Jiao Xue, Lanhua Guan, Qihui Zhu, Jinhui Chen, Yanwei Zhou, Na Liu, Ye Peng, Hongqing Xie, Song Ge, Qiang Gao, Xuanmin Guang, Haibin Xu, Siqin Liu, Cheng Tielong, Xiaofei Long, Zhaodong Hao, Thomas Laux, Jin Zhang, Jisen Shi, Liming Yang, Mingming Shi, Yu Sheng, Ye Lu, Zhangrong Wang, Linfeng Yang, Chenxi Zhao, Qianhua Zhu, and Sihai Yang
- Subjects
0106 biological sciences ,0301 basic medicine ,China ,Chromosomes, Artificial, Bacterial ,Letter ,Liriodendron ,Genetic Linkage ,Population genetics ,Lineage (evolution) ,Population ,Plant Science ,Biology ,Polymorphism, Single Nucleotide ,01 natural sciences ,Liriodendron chinense ,Magnoliids ,Magnoliopsida ,Plant evolution ,03 medical and health sciences ,Mesangiospermae ,Author Correction ,education ,Eudicots ,Phylogeny ,Plant Proteins ,education.field_of_study ,Asia, Eastern ,biology.organism_classification ,Biological Evolution ,Genome evolution ,Genetic divergence ,Phylogeography ,030104 developmental biology ,Evolutionary biology ,North America ,DNA Transposable Elements ,Next-generation sequencing ,Genome, Plant ,010606 plant biology & botany - Abstract
The genus Liriodendron belongs to the family Magnoliaceae, which resides within the magnoliids, an early diverging lineage of the Mesangiospermae. However, the phylogenetic relationship of magnoliids with eudicots and monocots has not been conclusively resolved and thus remains to be determined1–6. Liriodendron is a relict lineage from the Tertiary with two distinct species—one East Asian (L. chinense (Hemsley) Sargent) and one eastern North American (L. tulipifera Linn)—identified as a vicariad species pair. However, the genetic divergence and evolutionary trajectories of these species remain to be elucidated at the whole-genome level7. Here, we report the first de novo genome assembly of a plant in the Magnoliaceae, L. chinense. Phylogenetic analyses suggest that magnoliids are sister to the clade consisting of eudicots and monocots, with rapid diversification occurring in the common ancestor of these three lineages. Analyses of population genetic structure indicate that L. chinense has diverged into two lineages—the eastern and western groups—in China. While L. tulipifera in North America is genetically positioned between the two L. chinense groups, it is closer to the eastern group. This result is consistent with phenotypic observations that suggest that the eastern and western groups of China may have diverged long ago, possibly before the intercontinental differentiation between L. chinense and L. tulipifera. Genetic diversity analyses show that L. chinense has tenfold higher genetic diversity than L. tulipifera, suggesting that the complicated regions comprising east–west-orientated mountains and the Yangtze river basin (especially near 30° N latitude) in East Asia offered more successful refugia than the south–north-orientated mountain valleys in eastern North America during the Quaternary glacial period., A high-quality reference genome for the plant Liriodendron chinense places magnoliids as sister to the clade consisting of eudicots and monocots. Population genomic analyses unravel the evolution of two distinct species in the genus Liriodendron.
- Published
- 2018
40. Identification and genetic characterization of a novel parvovirus associated with serum hepatitis in horses in China
- Author
-
Lingshuang Sun, Shoujun Li, Jiajun Ou, Haibin Xu, Liyan Wu, and Gang Lu
- Subjects
0301 basic medicine ,Male ,China ,Epidemiology ,Immunology ,lcsh:QR1-502 ,Hepatitis, Animal ,medicine.disease_cause ,Microbiology ,Virus ,Article ,lcsh:Microbiology ,lcsh:Infectious and parasitic diseases ,Parvoviridae Infections ,Parvovirus ,03 medical and health sciences ,Liver disease ,Virology ,Drug Discovery ,medicine ,Animals ,lcsh:RC109-216 ,Horses ,Phylogeny ,Equine pegivirus ,Hepatitis ,Genetic diversity ,biology ,General Medicine ,medicine.disease ,biology.organism_classification ,030104 developmental biology ,Infectious Diseases ,Coinfection ,Parasitology ,Female ,Horse Diseases ,Nested polymerase chain reaction - Abstract
A novel equine parvovirus, equine parvovirus-hepatitis (EqPV-H), was first discovered in a horse that died of equine serum hepatitis in the USA in 2018. EqPV-H was shown to be a novel etiological agent associated with equine serum hepatitis. Following this initial report, no additional studies on EqPV-H have been published. In this study, a total of 143 serum samples were collected from racehorses at 5 separate farms in China and were analyzed to detect EqPV-H DNA via nested PCR. The results indicated a high prevalence of EqPV-H (11.9%, 17/143) in the studied animals. In addition, a remarkably high coinfection rate (58.8%, 10/17) with 2 equine flaviviruses (equine hepacivirus and equine pegivirus) was observed in the EqPV-H positive equines. However, all equines tested negative for Theiler’s disease-associated virus, an etiological agent associated with equine serum hepatitis. The genomes of six field EqPV-H strains were sequenced and analyzed, with the results indicating that the Chinese EqPV-H strains have low genetic diversity and high genetic similarity with the USA EqPV-H strain BCT-01. A phylogenetic analysis demonstrated that the Chinese EqPV-H strains clustered with BCT-01 in the genus Copiparvovirus but were distantly related to another equine parvovirus identified in horse cerebrospinal fluid. In addition, liver enzyme levels were detected in the EqPV-H positive serum samples, and all the values were in the normal range, indicating that infection can occur without concurrent liver disease. This study will promote an understanding of the geographical distribution, genetic diversity, and pathogenicity of EqPV-H.
- Published
- 2018
41. SNHG16 promotes cell proliferation and inhibits cell apoptosis via regulation of the miR-1303p/STARD9 axis in renal cell carcinoma
- Author
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Tao Cheng, Weibing Shuang, Dawen Ye, Haibin Xu, Chao Guan, Wenge Fang, Mingli Gu, Zhao Yang, Weiqiang Xu, and Wenzhi Zhang
- Subjects
medicine.diagnostic_test ,Chemistry ,Competing endogenous RNA ,Cell growth ,Cell ,urologic and male genital diseases ,female genital diseases and pregnancy complications ,Flow cytometry ,Real-time polymerase chain reaction ,medicine.anatomical_structure ,Downregulation and upregulation ,Apoptosis ,microRNA ,Cancer research ,medicine - Abstract
BackgroundRenal cell carcinoma (RCC) is a fatal malignant tumor with high morbidity. Numerous medical studies have suggested that long noncoding RNAs (lncRNAs) exert their biological function on various cancerous progresses. Herein, functions of lncRNA SNHG16 in RCC cells and the mechanism medicated by SNHG16 were investigated.MethodsThe expression levels of SNHG16 and its downstream genes in RCC cells and tissues were examined utilizing reverse transcription quantitative polymerase chain reaction analyses. Cell counting kit-8 and 5-Ethynyl-2’-deoxyuridine assays were carried out to evaluate the proliferation of RCC cells, and flow cytometry analyses were employed to determine the apoptosis of RCC cells. Western blot analysis was applied to examine protein levels associated with cell proliferation and apoptosis. The combination between SNHG16 and miRNA as well as miRNA and its target gene were explored by luciferase reporter, RNA pull down, and RNA immunoprecipitation assays.ResultsThe significant upregulation of SNHG16 was observed in RCC tissues and cells. SNHG16 downregulation inhibited the proliferation and promoted the apoptosis of RCC cells. In addition, SNHG16 served as a competing endogenous RNA for miR-1301-3p, and STARD9 was a target gene of miR-1301-3p in RCC cells. SNHG16 upregulated STARD9 expression by binding with miR-1301-3p in RCC cells. Rescue assays validated that SNHG16 promoted RCC cell promotion and induced RCC cell apoptosis by upregulating STARD9 expression.ConclusionsSNHG16 promotes RCC cell proliferation and suppresses RCC cell apoptosis via interaction with miR-1301-3p to upregulate STARD9 expression in RCC cells.
- Published
- 2021
42. Classification and Recognition of Crops Based on GIS Image
- Author
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Haibin Xu and Zhaohai Wang
- Subjects
Geographic information system ,Feature data ,Geospatial analysis ,Computer science ,business.industry ,Agricultural engineering ,computer.software_genre ,Normalized Difference Vegetation Index ,Agriculture ,Remote sensing (archaeology) ,Feature (machine learning) ,Precision agriculture ,business ,computer - Abstract
Today, due to the rapid development of science and technology, new science and technology constantly change the status of agriculture, precision agriculture is developing rapidly. Precision agriculture is the combination of three new technologies: Global Positioning System (GPS), Remote Sensing Technology (RS) and Geographic Information System (GIS). In the 3S technology, GIS technology is the basis of realizing the other two technologies. It is a platform to achieve precision agriculture, supporting the input, analysis and output of agricultural resources data and other functions of precision agriculture. Classification and recognition of crop types is one of the most basic applications of precision agriculture. It can extract information from remote sensing images, accurately identify crop types and determine crop growth. In this paper, 7200 remote sensing image samples are divided into two groups: learning group and testing group. Combined with GIS image and RS technology, the characteristics of these four crops were summarized and counted through feature image extraction and feature data analysis of 5200 study group samples in GIS system. 2000 samples in the test group were used to calculate the recognition rate. Through experiments, we can know the recognition rate of peanut, spring maize, sweet potato and summer maize. The highest recognition rate is 98.60%, the lowest recognition rate is 90.20%, and the total recognition rate is 94.10%. It shows that in this experiment, the crop recognition rate of remote sensing image is very high in the application of classification and recognition based on GIS crop images. During the period when the spectral characteristics are very obvious, the recognition rate of crops in remote sensing images is higher, and the total recognition rate is increased by 3.98%. The NDVI values of crops in remote sensing images were analyzed and calculated, and the NDVI values of four crops in each growing period were obtained. By studying the NDVI value, we can determine the types of four crops and their growth period, and the accuracy of determining the types of crops is higher than that of determining the growth period of crops. Through the classification and identification of crop species and crop growth period, two experiments verify that the combination of GIS image and remote sensing image can improve the recognition accuracy of crop classification and identification, and the use of geospatial data in GIS can identify the differences between crops. By combining GIS images with remote sensing images, the development of precision agriculture can be promoted, and the reference for agricultural production and agricultural structure adjustment in designated areas can be provided.
- Published
- 2021
43. Growth differentiation factor-5-gelatin methacryloyl injectable microspheres laden with adipose-derived stem cells for repair of disc degeneration
- Author
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Linwei Chen, Ye Wang, Shining Xiao, Yong He, Miao Sun, Kaishun Xia, Quanming Yang, An Liu, Liwei Ying, Chenggui Wang, Haibin Xu, and Chao Yu
- Subjects
food.ingredient ,0206 medical engineering ,Biomedical Engineering ,Adipose tissue ,Bioengineering ,02 engineering and technology ,Intervertebral Disc Degeneration ,Biochemistry ,Gelatin ,Degenerative disc disease ,Biomaterials ,Extracellular matrix ,food ,medicine ,Animals ,Chemistry ,Regeneration (biology) ,Stem Cells ,Growth differentiation factor ,Intervertebral disc ,General Medicine ,021001 nanoscience & nanotechnology ,medicine.disease ,020601 biomedical engineering ,Microspheres ,Cell biology ,Rats ,medicine.anatomical_structure ,Adipose Tissue ,Stem cell ,0210 nano-technology ,Biotechnology - Abstract
Nucleus pulposus (NP) degeneration is the major cause of degenerative disc disease (DDD). This condition cannot be treated or attuned by traditional open or minimally invasive surgical options. However, a combination of stem cells, growth factors (GFs) and biomaterials present a viable option for NP regeneration. Injectable biomaterials act as carriers for controlled release of GFs and deliver stem cells to target tissues through a minimally invasive approach. In this study, injectable Gelatin methacryloyl (GelMA) microspheres (GMs) with controllable, uniform particle sizes were rapidly biosythesized through a low-cost electrospraying method. The GMs were used as delivery vehicles for cells and GFs and they exhibited good mechanical properties, biocompatibilities and enhanced the in vitro differentiation of laden cells into NP-like phenotypes. Furthermore, this integrated system attenuated the in vivo degeneration of rat intervertebral disc, maintained NP tissue integrity and accelerated the synthesis of extracellular matrix (ECM). Therefore, this novel therapeutic system is a promising option for the treatment of Degenerative disc disease (DDD).
- Published
- 2020
44. A novel high-accuracy genome assembly method utilizing a high-throughput workflow
- Author
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Hana Šimková, Annapurna Chitikineni, Wanquan Ji, Qingdong Zeng, Liping Xing, Hongxiang Ma, Qiang Cheng, Jiansong Tang, Xiaojun Nie, Xiaoting Wang, Shilin Chen, Xiangqian Lu, Qin Xiong, Jianhui Wu, Aizhong Cao, Zhensheng Kang, Jinhui Chen, Yunxin Yu, Jisen Shi, Hong Zhang, Shengjie Liu, Jiang Xu, Jan Šafář, Zhonghua Wang, Zhaodong Hao, Weining Song, Baozhu Guo, Wenjin Cao, Dejun Han, Changfa Wang, Prasad Bajaj, Jiajie Liu, Yan Zhou, Liming Yang, Lin Huang, Fengping Yuan, Shouping Yang, Michael Nagle, Jianguo Liang, Guowei Qin, Qiang Wang, Jaroslav Doležel, Rajeev K. Varshney, and Haibin Xu
- Subjects
Whole genome sequencing ,Bacterial artificial chromosome ,Chromosome (genetic algorithm) ,Computer science ,Genetic variation ,RefSeq ,Sequence assembly ,Chromosome ,Computational biology ,Genome ,Phenotype ,Reference genome ,Genomic organization - Abstract
Across domains of biological research using genome sequence data, high-quality reference genome sequences are essential for characterizing genetic variation and understanding the genetic basis of phenotypes. However, the construction of genome assemblies for various species is often hampered by complexities of genome organization, especially repetitive and complex sequences, leading to mis-assembly and missing regions. Here, we describe a high-throughput gold standard genome assembly workflow using a large-scale bacterial artificial chromosome (BAC) library with a refined two-step pooling strategy and the Lamp assembler algorithm. This strategy minimizes the laborious processes of physical map construction and clone-by-clone sequencing, enabling inexpensive sequencing of several thousand BAC clones. By applying this strategy with a minimum tiling path BAC clone library for the short arm of chromosome 2D (2DS) of bread wheat, 98% of BAC sequences, covering 92.7% of the 2DS chromosome, were assembled correctly for this species with a highly complex and repetitive genome. We also identified 48 large mis-assemblies in the reference wheat genome assembly (IWGSC RefSeq v1.0) and corrected these large mis-assemblies in addition to filling 92.2% of the gaps in RefSeq v1.0. Our 2DS assembly represents a new benchmark for the assembly of complex genomes with both high accuracy and efficiency.
- Published
- 2020
45. Comparison of Pathogenicity of Different Infectious Doses of H3N2 Canine Influenza Virus in Dogs
- Author
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Yongbo Liu, Cheng Fu, Gang Lu, Jie Luo, Shaotang Ye, Jiajun Ou, Xiangbin Wang, Haibin Xu, Ji Huang, Liyan Wu, Xin Zhang, Peixin Wu, and Shoujun Li
- Subjects
minimum infectious dose ,lcsh:Veterinary medicine ,General Veterinary ,beagle ,business.industry ,Infectious dose ,Canine influenza ,Outbreak ,H3N2 ,Beagle ,Virus ,Titer ,Immunology ,pathogenicity ,lcsh:SF600-1100 ,Medicine ,Veterinary Science ,Viral shedding ,business ,canine influenza virus ,Pathological ,Original Research - Abstract
The canine influenza virus (CIV) outbreaks have raised concerns as they pose a threat to the health of dogs. The successful construction of a canine influenza (CI) infection model is essential to study the CIV. Here we investigated the pathogenicity of different infectious doses of H3N2 CIV in Beagle dogs. Thirty-seven healthy Beagle dogs were used in the experiment and were infected with 103, 104, 105, and 106 50% egg-infectious doses (EID50). Compared to the dogs in the other three groups, those in the 106 EID50 group presented with obvious clinical symptoms, high virus titer, and typical pathological changes. Considering the ensemble of clinical scores, body temperature, virus shedding, lung lesions, pathological section scores, and visceral virus titers, we determined that 106 EID50 is the minimum infectious dose for the Beagle infection model. The other three infectious doses had almost no clinical symptoms. These results indicate that 106 EID50 is the minimum infectious dose of H3N2 CIV that can cause obvious clinical manifestations and pathological changes associated with CI in Beagle dogs. The theoretical framework developed in this research will guide the establishment of an infection model of CIV for future research.
- Published
- 2020
46. Corrigendum to 'Zearalenone causes embryotoxicity and induces oxidative stress and apoptosis in differentiated human embryonic stem cells' [Toxicology in Vitro 54 (2019) 243–250]
- Author
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Xudong Jia, Haiqin Fang, Haibin Xu, Hanwen Cao, and Yuan Zhi
- Subjects
chemistry.chemical_compound ,chemistry ,Apoptosis ,medicine ,General Medicine ,Biology ,Toxicology ,medicine.disease_cause ,Embryonic stem cell ,Zearalenone ,In vitro ,Oxidative stress ,Cell biology - Published
- 2022
47. The role of chemotherapy in patients with T1bN0M0 triple-negative breast cancer: a real-world competing risk analysis
- Author
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Yunyan Lu, Ouou Yang, Junling He, Tian Lan, Zujian Hu, Haibin Xu, and Hua Luo
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Oncology ,Chemotherapy ,medicine.medical_specialty ,business.industry ,medicine.medical_treatment ,chemotherapy ,Competing risks ,survival analysis ,Internal medicine ,Cohort ,Epidemiology ,Propensity score matching ,triple-negative breast cancer ,Medicine ,T1bN0M0 breast cancer ,In patient ,business ,Survival analysis ,Triple-negative breast cancer ,Research Paper - Abstract
The objective of the present study was to implement Kaplan-Meier analysis, competing risk analysis, and propensity score matching to evaluate whether the patients with T1bN0M0 triple-negative breast (TNBC) could benefit from adjuvant chemotherapy. A total of 1849 patients were identified in the Surveillance, Epidemiology, and End Results (SEER) database from 2010 to 2015. All eligible patients were divided into two cohorts, the chemotherapy (1155 patients) and the no-chemotherapy (694 patients) cohorts. Similar 5-year breast cancer-specific survival (BCSS) was observed in the chemotherapy and no-chemotherapy cohorts (96.1% vs. 96.0%, p=0.820). The results of the competing risk analysis showed a comparable 5-year breast cancer-specific death (BCSD) in both groups (chemotherapy 3.6% vs. no-chemotherapy 3.4%, p=0.778). Also, a higher 5-year other causes death (OCD) was observed in the no-chemotherapy cohort (0.7% vs. 5.4%, p
- Published
- 2020
48. Rea regulates microglial polarization and attenuates neuronal apoptosis via inhibition of the NF-κB and MAPK signalings for spinal cord injury repair
- Author
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Haibin Xu, Shining Xiao, Kan Xu, Jinwei Lu, Quanming Yang, and Chenggui Wang
- Subjects
0301 basic medicine ,MAPK/ERK pathway ,neuronal apoptosis ,MAP Kinase Signaling System ,Inflammation ,Apoptosis ,Pharmacology ,Motor Activity ,Neuroprotection ,Models, Biological ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Medicine ,Animals ,Spinal cord injury ,Neuronal apoptosis ,Cells, Cultured ,Spinal Cord Injuries ,Neurons ,business.industry ,Plant Extracts ,NF-kappa B ,NF-κB ,Rehmannioside A ,Cell Biology ,Original Articles ,medicine.disease ,In vitro ,microglia polarization ,spinal cord injury ,Rats ,Rehmannia ,Disease Models, Animal ,030104 developmental biology ,Neuroprotective Agents ,chemistry ,030220 oncology & carcinogenesis ,Molecular Medicine ,Female ,Original Article ,Microglia ,medicine.symptom ,Inflammation Mediators ,business ,Biomarkers ,Signal Transduction - Abstract
Inflammation and neuronal apoptosis aggravate the secondary damage after spinal cord injury (SCI). Rehmannioside A (Rea) is a bioactive herbal extract isolated from Rehmanniae radix with low toxicity and neuroprotection effects. Rea treatment inhibited the release of pro‐inflammatory mediators from microglial cells, and promoted M2 polarization in vitro, which in turn protected the co‐cultured neurons from apoptosis via suppression of the NF‐κB and MAPK signalling pathways. Furthermore, daily intraperitoneal injections of 80 mg/kg Rea into a rat model of SCI significantly improved the behavioural and histological indices, promoted M2 microglial polarization, alleviated neuronal apoptosis, and increased motor function recovery. Therefore, Rea is a promising therapeutic option for SCI and should be clinically explored.
- Published
- 2020
49. Effects of Marital Status on Prognosis in Women with Infiltrating Ductal Carcinoma of the Breast: A Real-World 1: 1 Propensity-Matched Study
- Author
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Zujian Hu, Haibin Xu, Yunyan Lu, Junling He, Tian Lan, Hua Luo, and Jiawei He
- Subjects
Oncology ,Adult ,medicine.medical_specialty ,Multivariate analysis ,Protective factor ,Breast Neoplasms ,Kaplan-Meier Estimate ,030204 cardiovascular system & hematology ,03 medical and health sciences ,0302 clinical medicine ,Breast cancer ,Infiltrating ductal carcinoma ,Risk Factors ,Internal medicine ,medicine ,Carcinoma ,Humans ,Breast ,Propensity Score ,Aged ,Proportional Hazards Models ,Marital Status ,business.industry ,Proportional hazards model ,Carcinoma, Ductal, Breast ,General Medicine ,Middle Aged ,Protective Factors ,medicine.disease ,Prognosis ,United States ,Carcinoma, Ductal ,030220 oncology & carcinogenesis ,Propensity score matching ,Multivariate Analysis ,Database Analysis ,Marital status ,Female ,business ,SEER Program - Abstract
BACKGROUND The effects of marital status on infiltrating ductal carcinoma of breast cancer (IDC) have not been studied in detail. This study investigated the impact of marital status on IDC patients. MATERIAL AND METHODS SEER databases were searched from 2010 to 2015 for subjects who were married, divorced, single, and widowed. The influence of marital status on breast cancer-specific survival (BCSS) and overall survival (OS) of IDC patients was investigated through multivariate Cox regression analysis and Kaplan-Meier analysis. To prevent bias, propensity score matching (PSM) analysis was performed. RESULTS The 5-year OS was 89.6%in married patients, 84.9% in divorced patients, 83.5% in single patients, and 71.3% in widowed patients (p
- Published
- 2020
50. The Role of Adjuvant Chemotherapy in Metaplastic Breast Carcinoma: A Competing Risk Analysis of the SEER Database
- Author
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Tian Lan, Yunyan Lu, Ruzhen Zheng, Xiying Shao, Hua Luo, Junling He, Huifen Yang, Haibin Xu, Xiaojia Wang, and Zujian Hu
- Subjects
0301 basic medicine ,Oncology ,Cancer Research ,medicine.medical_specialty ,medicine.medical_treatment ,Subgroup analysis ,chemotherapy ,survival analysis ,nomogram ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,medicine ,Cumulative incidence ,skin and connective tissue diseases ,Lymph node ,Survival analysis ,RC254-282 ,metaplastic breast carcinoma ,Original Research ,Chemotherapy ,business.industry ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Metaplastic Breast Carcinoma ,Nomogram ,SEER ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Propensity score matching ,business - Abstract
Purpose: Chemotherapy is the clinically recommended treatment for patients with operable metaplastic breast carcinoma (MBC); however, its impact remains controversial. This study investigated the possible role of chemotherapy in the treatment of MBC.Methods: The Surveillance, Epidemiology, and End Results (SEER) database was used to identify the operable MBC patients. The competing risk analysis along with the propensity score matching (PSM) method was performed to evaluate the effect of chemotherapy. Moreover, a competing risk nomogram was built to identify prognosis in patients with MBC.Results: Of the 1137 patients with MBC, 775 received chemotherapy and 362 did not receive chemotherapy. The 5-year cumulative incidence of breast cancer-specific death (BCSD) showed similar outcomes in both the Chemo and No-Chemo groups (21.1 vs. 24.3%, p = 0.57). Chemotherapy showed no apparent association with BCSD (HR, 1.07; 95% CI, 0.72–1.60; p = 0.72), even after subgroup analysis or PSM. Race, tumor size, lymph node status, and radiation were identified as the significant factors for MBC after a penalized variable selection process. In addition, a competing risk nomogram showed relatively good accuracy of prediction with a C-index of 0.766 (95% CI, 0.700–0.824).Conclusion: Our findings demonstrated that chemotherapy did not improve BCSD for operable MBC patients. Thus, it may indicate the need to reduce exposure to the current chemotherapy strategies for patients with resectable MBC. Additionally, some novel treatment strategies are required urgently to identify and target the potential biomarkers.
- Published
- 2020
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