106 results on '"Giovanni, Gherardi"'
Search Results
2. A urinary tract infection caused by Escherichia coli mucoid phenotype progresses to a pneumonia and respiratory failure
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Federica Quarata, Diana Lelli, Davide Maria Biancone, Giovanni Gherardi, and Raffaele Antonelli Incalzi
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General Medicine - Published
- 2023
3. Laboratory breakpoints for assessing high level gentamicin resistance in Streptococcus agalactiae: it is the time for a consensus
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Roberta Creti, Monica Imperi, Alberto Berardi, Silvia Angeletti, and Giovanni Gherardi
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Microbiology (medical) ,Aminoglycosides ,Antibiotic resistance ,Group B streptococci ,High level gentamicin resistance ,Streptococcus agalactiae ,Consensus ,General Medicine ,Microbial Sensitivity Tests ,Anti-Bacterial Agents ,Infectious Diseases ,Streptococcal Infections ,Humans ,Gentamicins - Published
- 2022
4. Meet the Editorial Board Member
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Giovanni Gherardi
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Pharmacology ,Infectious Diseases - Published
- 2022
5. Preface
- Author
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Giovanni Gherardi
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Pharmacology ,Infectious Diseases - Published
- 2022
6. Preface
- Author
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Giovanni Gherardi
- Subjects
Pharmacology ,Infectious Diseases - Published
- 2023
7. Microbiological Laboratory Diagnosis of Human Brucellosis: An Overview
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Giovanni Di Bonaventura, Silvia Angeletti, Andrea Ianni, Tommasangelo Petitti, and Giovanni Gherardi
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Microbiology (medical) ,serological test ,Infectious Diseases ,General Immunology and Microbiology ,nucleic acid amplification test ,brucellosis ,culture method ,Immunology and Allergy ,Medicine ,Review ,Molecular Biology ,laboratory diagnosis - Abstract
Brucella spp. are Gram-negative, non-motile, non-spore-forming, slow-growing, facultative intracellular bacteria causing brucellosis. Brucellosis is an endemic of specific geographic areas and, although underreported, represents the most common zoonotic infection, with an annual global incidence of 500,000 cases among humans. Humans represent an occasional host where the infection is mainly caused by B. melitensis, which is the most virulent; B. abortus; B. suis; and B. canis. A microbiological analysis is crucial to identifying human cases because clinical symptoms of human brucellosis are variable and aspecific. The laboratory diagnosis is based on three different microbiological approaches: (i) direct diagnosis by culture, (ii) indirect diagnosis by serological tests, and (iii) direct rapid diagnosis by molecular PCR-based methods. Despite the established experience with serological tests and highly sensitive nucleic acid amplification tests (NAATs), a culture is still considered the “gold standard” in the laboratory diagnosis of brucellosis due to its clinical and epidemiological relevance. Moreover, the automated BC systems now available have increased the sensitivity of BCs and shortened the time to detection of Brucella species. The main limitations of serological tests are the lack of common interpretative criteria, the suboptimal specificity due to interspecies cross-reactivity, and the low sensitivity during the early stage of disease. Despite that, serological tests remain the main diagnostic tool, especially in endemic areas because they are inexpensive, user friendly, and have high negative predictive value. Promising serological tests based on new synthetic antigens have been recently developed together with novel point-of-care tests without the need for dedicated equipment and expertise. NAATs are rapid tests that can help diagnose brucellosis in a few hours with high sensitivity and specificity. Nevertheless, the interpretation of NAAT-positive results requires attention because it may not necessarily indicate an active infection but rather a low bacterial inoculum, DNA from dead bacteria, or a patient that has recovered. Refined NAATs should be developed, and their performances should be compared with those of commercial and home-made molecular tests before being commercialized for the diagnosis of brucellosis. Here, we review and report the most common and updated microbiological diagnostic methods currently available for the laboratory diagnosis of brucellosis.
- Published
- 2021
8. Repurposing the Veterinary Antibiotic Apramycin for Antibacterial and Antibiofilm Activity Against
- Author
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Giovanni, Di Bonaventura, Veronica, Lupetti, Fabio, Verginelli, Sara, Giancristofaro, Rosemary, Barbieri, Giovanni, Gherardi, and Arianna, Pompilio
- Abstract
To evaluate theThe activity of antibiotics against planktonic cells was assessed by performing MIC, MBC, and time-kill assays. The activity against mature biofilms was evaluated, in a microtiter plate, both in terms of dispersion (crystal violet assay) and residual viability (viable cell count). The effect of drug exposure on selectedApramycin MICOur results warrant future pharmacokinetic and pharmacodynamic studies for supporting the rationale to repurpose apramycin, a veterinary aminoglycoside, for CF lung infections.
- Published
- 2021
9. Remote Battery Monitoring System enforcing safety features in Electric Vehicles
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Adriana Theodorakopoulou, Eleonora Montanari, Giovanni Gherardi, Ioannis Deligiannis, and Valerio Piccini
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MQTT ,Battery (electricity) ,business.product_category ,Computer science ,business.industry ,End user ,Powertrain ,Electric vehicle ,Automotive industry ,business ,Original equipment manufacturer ,Automotive engineering ,Voltage - Abstract
As a consequence of the current developments in the automotive industry and especially in electric vehicle manufacturing, new legitimate aspects regarding the safety of people, systems and infrastructures must be addressed. The need for higher powertrain power density is driving battery voltages up to 1200 Vdc, which poses significant safety challenges. Fatigue and instantaneous loads on battery and high voltage components in the form of historical data can support OEMs' efforts to improve safety and production effectiveness. Therefore, it is essential to monitor vehicle batteries individually and acknowledge them when necessary. This paper describes a wireless monitoring system that collects battery data and transmits it wirelessly (LoRa/Wi-Fi/4G) to end users to inform them about battery status while also generating historical data about battery profile. The purpose of this application is to ensure safer battery practices (charging/storage/maintenance) by informing the end-user of any abnormal condition, as well as to store historical data that can be used for battery behavior analysis under different operating conditions. Finally, we present a practical example of this system applied by Energica Motor Company in the FIM Enel MotoE World Cup.
- Published
- 2021
10. Collection, transport and storage procedures for blood culture specimens in adult patients: recommendations from a board of Italian experts
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Giovanni Gherardi, Vincenzo Puro, Pierluigi Viale, Roberto Rigoli, Bruno Viaggi, Francesca De Plato, Gaetano Pierpaolo Privitera, and Carla Fontana
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Adult ,0301 basic medicine ,Quality management ,Quality Assurance, Health Care ,030106 microbiology ,Clinical Biochemistry ,Storage ,Transport ,03 medical and health sciences ,0302 clinical medicine ,Humans ,Medicine ,Blood culture ,030212 general & internal medicine ,Blood culture collection ,Blood Specimen Collection ,Adult patients ,medicine.diagnostic_test ,business.industry ,Biochemistry (medical) ,Blood cultures ,Bloodstream infections ,General Medicine ,Gold standard (test) ,Blood collection ,medicine.disease ,Italy ,Blood Culture ,Medical emergency ,business ,Quality assurance - Abstract
Bloodstream infections (BSIs) remain a potentially life-threatening condition. The gold standard for the diagnosis of BSI is still blood cultures (BCs), and the diagnostic yield depends on clinical and technical factors that have an impact on collection and transportation. Hence, monitoring of the entire pre-analytical process from blood collection to transportation to the microbiology laboratory is critical. To optimize the clinical impact of the diagnostic and therapeutic procedures, a multidisciplinary approach and univocal protocols are mandatory. A board of specialists discussed the available evidence on the pre-analytical process and produced the present document to guide physicians and nurses on the ideal execution of BC: (1) timing and preparation for blood collection; (2) skin antisepsis; (3) blood volume; (4) sampling method and safety; (5) medium to be used; (6) time to BC transportation; and (7) quality assurance and quality management.
- Published
- 2019
11. Evaluation of in vitro activity of ceftolozane-tazobactam compared to other antimicrobial agents against Pseudomonas aeruginosa isolates from cystic fibrosis patients
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Giovanni Di Bonaventura, Ersilia Fiscarelli, Arianna Pompilio, Giulia Linardos, and Giovanni Gherardi
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Adult ,Male ,0301 basic medicine ,Microbiology (medical) ,Tazobactam ,Adolescent ,Cystic Fibrosis ,medicine.drug_class ,030106 microbiology ,Antibiotics ,Drug resistance ,medicine.disease_cause ,Meropenem ,Microbiology ,Young Adult ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Humans ,Pseudomonas Infections ,030212 general & internal medicine ,Child ,Antiinfective agent ,business.industry ,Pseudomonas aeruginosa ,Infant, Newborn ,Infant ,General Medicine ,Middle Aged ,Antimicrobial ,Anti-Bacterial Agents ,Cephalosporins ,Multiple drug resistance ,Infectious Diseases ,Child, Preschool ,Colistin ,Female ,beta-Lactamase Inhibitors ,business ,medicine.drug - Abstract
The in vitro activity of ceftolozane-tazobactam (C-T) was evaluated comparatively to other antibiotics against 188 Pseudomonas aeruginosa isolates collected from cystic fibrosis (CF) patients. Overall, the activity of C-T was comparable to colistin (susceptibility rate: 85.1% vs. 89.4%) but significantly higher than other antimicrobials. Particularly, C-T was active against 70% of meropenem nonsusceptible isolates and 64.1% of those nonsusceptible to beta-lactams. C-T was active against 70%, 58.1%, and 100% of multidrug-resistant, extensively drug-resistant (XDR), and pandrug-resistant isolates, respectively. No differences in C-T activity were found between isolates from children and adult patients, except for XDR ones significantly more susceptible in older patients. C-T and colistin exhibited comparable susceptibility rate (91.1% vs. 86.7%) also against 68 isolates collected during pulmonary exacerbations. Activity of C-T towards mucoid isolates was less than colistin (82.9% vs. 97.6%) but higher compared with other antibiotics. C-T represents a promising agent for treating CF lung infections.
- Published
- 2019
12. Rapid Detection of Methicillin-Resistant Staphylococcus aureus Directly from Blood for the Diagnosis of Bloodstream Infections: A Mini-Review
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Giovanni Di Bonaventura, Giovanni Gherardi, Anna Rita Buonomini, and Elisabetta Riva
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0301 basic medicine ,Staphylococcus aureus ,bloodstream infections ,030106 microbiology ,Clinical Biochemistry ,Human pathogen ,Review ,medicine.disease_cause ,Rapid detection ,Microbiology ,03 medical and health sciences ,0302 clinical medicine ,methicillin resistance ,Antimicrobial stewardship ,Medicine ,Blood culture ,030212 general & internal medicine ,rapid tests ,lcsh:R5-920 ,medicine.diagnostic_test ,business.industry ,Gold standard (test) ,biochemical phenomena, metabolism, and nutrition ,Antimicrobial ,bacterial infections and mycoses ,Methicillin-resistant Staphylococcus aureus ,lcsh:Medicine (General) ,business - Abstract
Staphylococcus aureus represents a major human pathogen able to cause a number of infections, especially bloodstream infections (BSI). Clinical use of methicillin has led to the emergence of methicillin-resistant S. aureus (MRSA) and MRSA-BSI have been reported to be associated with high morbidity and mortality. Clinical diagnosis of BSI is based on the results from blood culture that, although considered the gold standard method, is time-consuming. For this reason, rapid diagnostic tests to identify the presence of methicillin-susceptible S. aureus (MSSA) and MRSA isolates directly in blood cultures are being used with increasing frequency to rapidly commence targeted antimicrobial therapy, also in the light of antimicrobial stewardship efforts. Here, we review and report the most common rapid non-molecular and molecular methods currently available to detect the presence of MRSA directly from blood.
- Published
- 2020
13. Whole genome sequencing of carbapenem-resistant
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Carla, Fontana, Silvia, Angeletti, Walter, Mirandola, Eleonora, Cella, Lai, Alessia, Gianguglielmo, Zehender, Marco, Favaro, Davide, Leoni, Diego Delle, Rose, Giovanni, Gherardi, Lucia De, Florio, Marco, Salemi, Massimo, Andreoni, Loredana, Sarmati, and Massimo, Ciccozzi
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Adult ,Aged, 80 and over ,Male ,Molecular Epidemiology ,Whole Genome Sequencing ,Bacteremia ,Middle Aged ,beta-Lactam Resistance ,beta-Lactamases ,Anti-Bacterial Agents ,Disease Outbreaks ,Klebsiella Infections ,Evolution, Molecular ,Klebsiella pneumoniae ,Young Adult ,Carbapenem-Resistant Enterobacteriaceae ,Bacterial Proteins ,Carbapenems ,Humans ,Female ,Genome, Bacterial ,Phylogeny ,Aged ,Multilocus Sequence Typing - Published
- 2020
14. Whole genome sequencing of carbapenem-resistant Klebsiella pneumoniae: evolutionary analysis for outbreak investigation
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Diego Delle Rose, Davide Leoni, Gianguglielmo Zehender, Carla Fontana, Marco Salemi, Lai Alessia, Lucia Florio, Marco Favaro, Massimo Ciccozzi, Giovanni Gherardi, Eleonora Cella, Loredana Sarmati, Silvia Angeletti, Massimo Andreoni, and Walter Mirandola
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Microbiology (medical) ,Whole genome sequencing ,Genetics ,whole genome sequencing ,Molecular epidemiology ,Phylogenetic tree ,phylogenetic analysis ,Biology ,medicine.disease ,Microbiology ,Genome ,Settore MED/17 ,Klebsiella pneumoniae ,carabapenemase resistance ,Phylogenesis ,nosocomial infection ,medicine ,Multilocus sequence typing ,Klebsiella pneumonia ,Clade - Abstract
Aim: Carbapenemase-resistant Enterobacteriaceae represents a major concern in hospital setting. Materials & methods: The evolutionary history of carbapenem-resistant Klebsiella pneumonia strains was analyzed by core genome multilocus sequence typing and Bayesian phylogenesis by whole genomes sequencing. Results: A great increase carbapenem-resistant K. pneumoniae causing blood stream infection was observed in the years 2015–2016. At multilocus sequence typing (MLST), they were prevalently ST512 and ST101. ST512 were core genome (cg)MLST 53, while ST101 mainly cgMLST453. The minimum-spanning tree, based on cgMLST, showed strains clustering based on the different STs. By Bayesian phylogenetic analysis, maximum clade credibility tree showed that strains were introduced in the year 2005 with the most probable location in the ICU ward. Two outbreaks by ST101 and ST512 strains with Tower T8 as the probable location were evidenced. Conclusion: Molecular epidemiology is a powerful tool to track the way of transmission of resistant bacteria within the hospital setting.
- Published
- 2020
15. Clonal Diversity, Biofilm Formation, and Antimicrobial Resistance among Stenotrophomonas maltophilia Strains from Cystic Fibrosis and Non-Cystic Fibrosis Patients
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Ersilia Fiscarelli, Vincenzo Savini, Giovanni Di Bonaventura, Arianna Pompilio, and Giovanni Gherardi
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Microbiology (medical) ,antibiotic resistance ,Stenotrophomonas maltophilia ,Population ,Drug resistance ,Biochemistry ,Microbiology ,Tazobactam ,Antibiotic resistance ,medicine ,Pharmacology (medical) ,General Pharmacology, Toxicology and Pharmaceutics ,education ,education.field_of_study ,biology ,lcsh:RM1-950 ,Biofilm ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,Multiple drug resistance ,Infectious Diseases ,lcsh:Therapeutics. Pharmacology ,biofilm formation ,stenotrophomonas maltophilia ,Piperacillin ,medicine.drug - Abstract
The intrinsic antibiotic resistance of Stenotrophomonas maltophilia, along with its ability to form biofilm both on abiotic surfaces and host tissues, dramatically affects the efficacy of the antibiotic therapy. In this work, 85 S. maltophilia strains isolated in several hospital of central Italy and from several clinical settings were evaluated for their genetic relatedness (by pulsed-field gel electrophoresis, PFGE), biofilm formation (by microtiter plate assay), and planktonic antibiotic resistance (by Kirby&ndash, Bauer disk diffusion technique). The S. maltophilia population showed a high genetic heterogeneity: 64 different PFGE types were identified, equally distributed in cystic fibrosis (CF) and non-CF strains, and some consisted of multiple strains. Most of the strains (88.2%) were able to form biofilm, although non-CF strains were significantly more efficient than CF strains. CF strains produced lower biofilm amounts than non-CF strains, both those from respiratory tracts and blood. Non-CF PFGE types 3 and 27 consisted of strong-producers only. Cotrimoxazole and levofloxacin were the most effective antibiotics, being active respectively against 81.2% and 72.9% of strains. CF strains were significantly more resistant to piperacillin/tazobactam compared to non-CF strains (90% vs. 53.3%), regardless of sample type. Among respiratory strains, cotrimoxazole was more active against non-CF than CF strains (susceptibility rates: 86.7% versus 75%). The multidrug resistant phenotype was significantly more prevalent in CF than non-CF strains (90% versus 66.7%). Overall, the multidrug-resistance level was negatively associated with efficiency in biofilm formation. Our results showed, for the first time, that in S. maltophilia both classical planktonic drug resistance and the ability of biofilm formation might favor its dissemination in the hospital setting. Biofilm formation might act as a survival mechanism for susceptible bacteria, suggesting that clinical isolates should be routinely assayed for biofilm formation in diagnostic laboratories.
- Published
- 2020
16. To be capsulated or not be capsulated: that is the GAS question
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Monica Imperi, Roberta Creti, and Giovanni Gherardi
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Microbiology (medical) ,Genetics ,Virulence ,Streptococcus pyogenes ,Operon ,General Medicine ,Biology ,Infectious Diseases ,Bacterial Proteins ,Streptococcal Infections ,Mutation ,Mutation (genetic algorithm) ,Humans ,Hyaluronic Acid ,Bacterial Capsules - Published
- 2019
17. Impact of pneumococcal conjugate vaccine (PCV7 and PCV13) on pneumococcal invasive diseases in Italian children and insight into evolution of pneumococcal population structure
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Fortunato D'Ancona, Fernanda Pimentel de Araujo, Annalisa Pantosti, Fabio D'Ambrosio, Romina Camilli, Maria Del Grosso, Maria Grazia Caporali, Martina Del Manso, and Giovanni Gherardi
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Male ,0301 basic medicine ,Serotype ,medicine.medical_specialty ,Heptavalent Pneumococcal Conjugate Vaccine ,medicine.drug_class ,030106 microbiology ,Population ,Antibiotics ,Population structure ,Biology ,Serogroup ,medicine.disease_cause ,Pneumococcal Infections ,Pneumococcal conjugate vaccine ,Pneumococcal Vaccines ,03 medical and health sciences ,0302 clinical medicine ,Antibiotic resistance ,Drug Resistance, Multiple, Bacterial ,Internal medicine ,Streptococcus pneumoniae ,medicine ,Humans ,Public Health Surveillance ,030212 general & internal medicine ,Serotyping ,education ,education.field_of_study ,General Veterinary ,General Immunology and Microbiology ,Incidence ,Incidence (epidemiology) ,Vaccination ,Public Health, Environmental and Occupational Health ,Infant ,bacterial infections and mycoses ,Anti-Bacterial Agents ,Molecular Typing ,Infectious Diseases ,Italy ,Child, Preschool ,Immunology ,Molecular Medicine ,Female ,medicine.drug - Abstract
The use of PCV7 for children immunization was gradually implemented in the Italian regions starting from 2006 and was replaced by PCV13 in 2010-2011. In this study we aimed to assess the PCV impact on invasive pneumococcal diseases (IPD) incidence, serotype distribution and antibiotic resistance in Italian children under 5years old.All IPD cases in children from 5 Italian regions (Emilia-Romagna, Lombardia, A. P. Bolzano, A. P. Trento, and Piemonte) reported through the nationwide surveillance system during 2008-2014 were included in this study. Pneumococcal isolates were subjected to serotyping, antibiotic susceptibility testing, and clonal analysis according to standard methods.During the study period overall IPD incidence decreased from 7.8 cases/100,000 inhabitants in 2008 to 3.0 cases/100,000 in 2014 (61% decrease, P0.001). In particular, from 2008 to 2014, PCV7-type IPD decreased from 2.92 to 0.13 cases/100,000 inhabitants (95% decrease, P0.001) while PCV13-non-PCV7 type IPD decreased from 3.2 to 0.89 cases/100,000 inhabitants (72% decrease, P=0.008). Conversely, non-vaccine serotype (NVS) IPD increased overtime, becoming more common than PCV13 serotype IPD in 2013-2014. Emergent NVS 24F and 12F were the most prevalent in 2014. Antibiotic resistance testing revealed an overall increasing trend in penicillin resistance, from 14% in 2008 to 23% in 2014. Erythromycin resistance showed a downward trend, from 38% in 2008 to 27% in 2014. While in 2008 PCV13 serotypes were the major responsible for antibiotic resistance, during the following years antimicrobial resistance due to NVS increased, mainly as a result of expansion of pre-existing clones.Both PCVs led to a substantial decrease in vaccine-related IPD incidence in the children population. However NVS-related IPD increased, becoming the most prevalent in the last two-years period. Continuous surveillance is an essential tool to monitor evolution of pneumococcal population causing IPD in children.
- Published
- 2017
18. Clonal Diversity, Biofilm Formation, and Antimicrobial Resistance among
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Arianna, Pompilio, Vincenzo, Savini, Ersilia, Fiscarelli, Giovanni, Gherardi, and Giovanni, Di Bonaventura
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antibiotic resistance ,Stenotrophomonas maltophilia ,biofilm formation ,biochemical phenomena, metabolism, and nutrition ,Article - Abstract
The intrinsic antibiotic resistance of Stenotrophomonas maltophilia, along with its ability to form biofilm both on abiotic surfaces and host tissues, dramatically affects the efficacy of the antibiotic therapy. In this work, 85 S. maltophilia strains isolated in several hospital of central Italy and from several clinical settings were evaluated for their genetic relatedness (by pulsed-field gel electrophoresis, PFGE), biofilm formation (by microtiter plate assay), and planktonic antibiotic resistance (by Kirby–Bauer disk diffusion technique). The S. maltophilia population showed a high genetic heterogeneity: 64 different PFGE types were identified, equally distributed in cystic fibrosis (CF) and non-CF strains, and some consisted of multiple strains. Most of the strains (88.2%) were able to form biofilm, although non-CF strains were significantly more efficient than CF strains. CF strains produced lower biofilm amounts than non-CF strains, both those from respiratory tracts and blood. Non-CF PFGE types 3 and 27 consisted of strong-producers only. Cotrimoxazole and levofloxacin were the most effective antibiotics, being active respectively against 81.2% and 72.9% of strains. CF strains were significantly more resistant to piperacillin/tazobactam compared to non-CF strains (90% versus 53.3%), regardless of sample type. Among respiratory strains, cotrimoxazole was more active against non-CF than CF strains (susceptibility rates: 86.7% versus 75%). The multidrug resistant phenotype was significantly more prevalent in CF than non-CF strains (90% versus 66.7%). Overall, the multidrug-resistance level was negatively associated with efficiency in biofilm formation. Our results showed, for the first time, that in S. maltophilia both classical planktonic drug resistance and the ability of biofilm formation might favor its dissemination in the hospital setting. Biofilm formation might in fact act as a survival mechanism for susceptible bacteria, suggesting that clinical isolates should be routinely assayed for biofilm formation in diagnostic laboratories.
- Published
- 2019
19. TrustNet: Ensuring Normal-world and Trusted-world CAN-bus Networking
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Giovanni Gherardi, Othon Tomoutzoglou, George Kornaros, Dimitris Bakoyiannis, and Marcello Coppola
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0508 media and communications ,Computer science ,0502 economics and business ,05 social sciences ,Legacy system ,050801 communication & media studies ,050211 marketing ,Computer security ,computer.software_genre ,Replay attack ,computer ,CAN bus - Abstract
As the cybersecurity risks in automotives grow due to vehicles increasing connectivity, enhancing the cybersecurity cognition of automotive networks has become an urgent requirement in industry. While modern microcontrollers offer ARM’s based Trustzone feature to secure critical applications, secure intra-vehicular protocols are required to design next generation vehicles. With standard security solutions not being practical to vehicles due to resource constraints and compatibility issues, in this work we present a lightweight technique to enable both a virtual trusted channel and a normal untrusted channel over the same physical CAN-bus network, which we call TrustNet. The goal of TrustNet is to secure CAN-bus sensitive communications by protecting against masquerade and replay attacks with minimum overhead and full legacy support, and at the same time to provide normal-world communications.
- Published
- 2019
20. An Overview on Streptococcus bovis/Streptococcus equinus Complex Isolates: Identification to the Species/Subspecies Level and Antibiotic Resistance
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Giovanni Di Bonaventura, Arianna Pompilio, and Giovanni Gherardi
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0301 basic medicine ,antibiotic resistance ,030106 microbiology ,Erythromycin ,Review ,Microbial Sensitivity Tests ,Catalysis ,Microbiology ,Inorganic Chemistry ,lcsh:Chemistry ,03 medical and health sciences ,S. bovis/S. equinus complex ,Antibiotic resistance ,Streptococcal Infections ,medicine ,Animals ,Humans ,Physical and Theoretical Chemistry ,Molecular Biology ,lcsh:QH301-705.5 ,Spectroscopy ,biology ,Organic Chemistry ,Streptococcus ,Clindamycin ,Drug Resistance, Microbial ,Gene Expression Regulation, Bacterial ,General Medicine ,medicine.disease ,biology.organism_classification ,Streptococcus bovis ,Anti-Bacterial Agents ,Computer Science Applications ,Penicillin ,030104 developmental biology ,lcsh:Biology (General) ,lcsh:QD1-999 ,Infective endocarditis ,Vancomycin ,identification ,Streptococcus equinus ,medicine.drug - Abstract
Streptococcus bovis/Streptococcus equinus complex (SBSEC), a non-enterococcal group D Streptococcus spp. complex, has been described as commensal bacteria in humans and animals, with a fecal carriage rate in humans varying from 5% to over 60%. Among streptococci, SBSEC isolates represent the most antibiotic-resistant species—with variable resistance rates reported for clindamycin, erythromycin, tetracycline, and levofloxacin—and might act as a reservoir of multiple acquired genes. Moreover, reduced susceptibility to penicillin and vancomycin associated with mobile genetic elements have also been detected, although rarely. Since the association of SBSEC bacteremia and colon lesions, infective endocarditis and hepatobiliary diseases has been established, particularly in elderly individuals, an accurate identification of SBSEC isolates to the species and subspecies level, as well as the evaluation of antibiotic resistance, are needed. In this paper, we reviewed the major methods used to identify SBSEC isolates and the antimicrobial resistance rates reported in the scientific literature among SBSEC species.
- Published
- 2019
21. Adhesion and biofilm formation by Staphylococcus aureus clinical isolates under conditions relevant to the host: relationship with macrolide resistance and clonal lineages
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Giovanni Di Bonaventura, Monica Monaco, Giovanni Gherardi, Arianna Pompilio, Lucilla Baldassarri, Annalisa Pantosti, and Fernanda Pimentel de Araujo
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0301 basic medicine ,Microbiology (medical) ,Adult ,Male ,Methicillin-Resistant Staphylococcus aureus ,Ketolides ,Staphylococcus aureus ,Adolescent ,Genotype ,030106 microbiology ,Biology ,medicine.disease_cause ,Microbiology ,Bacterial Adhesion ,03 medical and health sciences ,Young Adult ,Antibiotic resistance ,Bacterial Proteins ,Drug Resistance, Bacterial ,Pulsed-field gel electrophoresis ,medicine ,Humans ,Penicillin-Binding Proteins ,Aged ,Gel electrophoresis ,Aged, 80 and over ,Genetic heterogeneity ,Clindamycin ,Biofilm ,General Medicine ,Middle Aged ,Staphylococcal Infections ,Anti-Bacterial Agents ,Electrophoresis, Gel, Pulsed-Field ,Erythromycin ,030104 developmental biology ,Phenotype ,A549 Cells ,Biofilms ,Multilocus sequence typing ,Female ,Macrolides ,Multilocus Sequence Typing - Abstract
Purpose. Staphylococcus aureus isolates, collected from various clinical samples, were analysed to evaluate the contribution of the genetic background of both erythromycin-resistant (ERSA) and -susceptible (ESSA) S. aureus strains to biofilm formation. Methods. A total of 66 ESSA and 43 ERSA clinical isolates were studied for adhesiveness and biofilm formation under different atmospheres. All isolates were evaluated for phenotypic and genotypic macrolide resistance, and for clonal relatedness by pulsed-field gel electrophoresis (PFGE), and by spa typing on representative isolates. Results. A high genetic heterogeneity was encountered, although 10 major PFGE types accounted for 86 % with a few small spatially and temporally related clusters. Overall, biofilm formation under anoxia was significantly lower than under oxic and micro-aerophilic atmospheres. Biofilm formation by ESSA was significantly higher compared to ERSA under oxic and micro-aerophilic conditions. Adhesiveness to plastic was significantly higher among respiratory tract infection isolates under micro-aerophilic conditions, while surgical site infection isolates formed significantly higher biomass of biofilm under oxic and micro-aerophilic atmospheres compared to anoxia. Pulsotype 2 and 4 strains formed significantly higher biofilm biomass than pulsotype 1, with strains belonging to CC8 forming significantly more compared to those belonging to CC5, under both oxic and micro-aerophilic atmospheres. Conclusions. S. aureus biofilm formation appears to be more efficient in ESSA than ERSA, associated with specific S. aureus lineages, mainly CC8 and CC15, and affected by atmosphere. Further studies investigating the relationship between antibiotic resistance and biofilm formation could prove useful in the development of new strategies for the management of S. aureus infections.
- Published
- 2018
22. Preface
- Author
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Giovanni Gherardi
- Subjects
Pharmacology ,Infectious Diseases - Published
- 2021
23. Towards holistic secure networking in connected vehicles through securing CAN-bus communication and firmware-over-the-air updating
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Dimitrios Mbakoyiannis, Nikolas Karadimitriou, Giovanni Gherardi, Eleonora Montanari, Othon Tomoutzoglou, Marcello Coppola, Ioannis Deligiannis, and George Kornaros
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010302 applied physics ,060102 archaeology ,Firmware ,business.industry ,Computer science ,Automotive industry ,06 humanities and the arts ,computer.software_genre ,Computer security ,01 natural sciences ,CAN bus ,Firewall (construction) ,Software ,Hardware and Architecture ,Software deployment ,0103 physical sciences ,0601 history and archaeology ,Confidentiality ,Architecture ,business ,computer - Abstract
With the increasing connectivity in modern vehicle infrastructure, solutions are required to harden the vehicle’s electronic architecture against potential attacks. One of the most important concerns is to ensure vehicle systems take appropriate and safe actions to diminish the probability of cyber-attacks success and mitigate the ramifications of potential unauthorized access. In this work, we present a layered systematic approach to achieve these goals along with a real implementation on an electric motorcycle. The developed secure infrastructure involves secure interconnection mechanisms to ensure trustworthy communications for electronic control nodes; hardware firewall to prevent interference and unauthorized access from untrusted applications/firmware; separated OS instances for different execution environments to provide best possible support for apps with different requirements and to further isolate apps from each other; and finally secure deployment of apps/firmware to ensure that apps are deployed unaltered to the automotive platform. In particular, considering both in-vehicle’s units resource-constraints, in terms of cost and size, and security needs that emerge in open bus-based networks, we introduce a secure technology that helps to prevent cyber-attacks in automotive Controller Area Network (CAN) protocol which is often used in in-vehicle networks. This technology, which we call secure CAN (sCAN), respects standard CAN-bus and realizes security mechanisms implemented in software or hardware, while adding less than 1 ms latency on the communication. sCAN in synergy with on-chip hardware firewalling which controls authorization level of on-chip accesses, and finally, together with securing the deployment of firmware updating over the air, build a fully-layered approach for connected vehicles to protect system assets, such as application and device authenticity, integrity, confidentiality, and availability.
- Published
- 2020
24. Preface
- Author
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Giovanni Gherardi
- Subjects
Pharmacology ,Infectious Diseases - Published
- 2020
25. Staphylococcal Taxonomy
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Giovanni Gherardi, Giovanni Di Bonaventura, and Vincenzo Savini
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0403 veterinary science ,040301 veterinary sciences ,0402 animal and dairy science ,04 agricultural and veterinary sciences ,040201 dairy & animal science - Published
- 2018
26. Prevalent emm Types among Invasive GAS in Europe and North America since Year 2000
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Roberta Creti, Luca Agostino Vitali, and Giovanni Gherardi
- Subjects
0301 basic medicine ,medicine.medical_specialty ,Streptococcus pyogenes ,030106 microbiology ,Combined use ,Disease ,03 medical and health sciences ,stomatognathic system ,Emm type ,Epidemiology ,medicine ,otorhinolaryngologic diseases ,Typing ,group A streptococci ,Genotyping ,group A streptococcus invasive disease ,emm types ,lcsh:Public aspects of medicine ,High mortality ,Public Health, Environmental and Occupational Health ,lcsh:RA1-1270 ,Europe ,stomatognathic diseases ,Geography ,North America ,Public Health ,Systematic Review ,Developed country ,Demography - Abstract
Background Streptococcus pyogenes or group A streptococcus (GAS) is an important human pathogen responsible for a broad range of infections, from uncomplicated to more severe and invasive diseases with high mortality and morbidity. Epidemiological surveillance has been crucial to detect changes in the geographical and temporal variation of the disease pattern; for this purpose the M protein gene (emm) gene typing is the most widely used genotyping method, with more than 200 emm types recognized. Molecular epidemiological data have been also used for the development of GAS M protein-based vaccines. Methods The aim of this paper was to provide an updated scenario of the most prevalent GAS emm types responsible for invasive infections in developed countries as Europe and North America (US and Canada), from 1st January 2000 to 31st May 2017. The search, performed in PubMed by the combined use of the terms (“emm”) and (“invasive”) retrieved 264 articles, of which 38 articles (31 from Europe and 7 from North America) met the inclusion criteria and were selected for this study. Additional five papers cited in the European articles but not retrieved by the search were included. Results emm1 represented the dominant type in both Europe and North America, replaced by other emm types in only few occasions. The seven major emm types identified (emm1, emm28, emm89, emm3, emm12, emm4, and emm6) accounted for approximately 50–70% of the total isolates; less common emm types accounted for the remaining 30–50% of the cases. Most of the common emm types are included in either one or both the 26-valent and 30-valent vaccines, though some well-represented emm types found in Europe are not. Conclusion This study provided a picture of the prevalent emm types among invasive GAS (iGAS) in Europe and North America since the year 2000 onward. Continuous surveillance on the emm-type distribution among iGAS infections is strongly encouraged also to determine the potential coverage of the developing multivalent vaccines.
- Published
- 2018
27. Contributors
- Author
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Anna Białecka, Joanna Białecka, Emilia Bonar, Aneta Buda, Michał Bukowski, Edoardo Carretto, Danuta Czernomysy-Furowicz, Giovanni Di Bonaventura, Cristina E. Di Francesco, Barbara Di Martino, Adam Dubin, Grzegorz Dubin, Marco Favaro, Paolo Fazii, Karol Fijałkowski, Carla Fontana, Giovanni Gherardi, Stefania Giedrys-Kalemba, Weronika M. Ilczyszyn, Joanna Jursa-Kulesza, Jolanta Karakulska, Andrzej Kasprowicz, Paweł Kaszycki, Maja Kosecka-Strojek, Beata Krawczyk, Józef Kur, Aldo Lepidi, Clemencia Chaves López, Paweł Mak, Roberta Marrollo, Fulvio Marsilio, Giovanni Mazzarrino, Jacek Międzobrodzki, Paola Nardini, Paweł Nawrotek, Antonello Paparella, Eugenio Pontieri, Chiara Rossi, Barbara Różalska, Beata Sadowska, Vincenzo Savini, Annalisa Serio, Natalia Stach, Rosa Visiello, and Benedykt Władyka
- Published
- 2018
28. 3. Inquiry into the Origins of Florence
- Author
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Giovanni Gherardi
- Published
- 2017
29. 35. Tuscany as the Cradle of Christianity
- Author
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Giovanni Gherardi
- Published
- 2017
30. Berto & More
- Author
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Giovanni Gherardi da Prato
- Published
- 2017
31. Dolcibene
- Author
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Giovanni Gherardi da Prato
- Published
- 2017
32. Meet Our Editor-in-Chief
- Author
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Giovanni Gherardi
- Subjects
Pharmacology ,Infectious Diseases ,Editor in chief ,Management - Published
- 2018
33. Preface
- Author
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Giovanni Gherardi
- Subjects
Pharmacology ,Infectious Diseases - Published
- 2018
34. Corynebacterium glucuronolyticum causing genitourinary tract infection: Case report and review of the literature
- Author
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G. Di Bonaventura, Giovanni Gherardi, Arianna Pompilio, and Vincenzo Savini
- Subjects
business.industry ,Genitourinary system ,Urinary system ,Corynebacterium glucuronolyticum ,Semen ,Infectious and parasitic diseases ,RC109-216 ,medicine.disease ,Article ,Microbiology ,Genitourinary tract infection ,Ciprofloxacin ,Infectious Diseases ,medicine.anatomical_structure ,Medicine ,Abdomen ,Urethritis ,business ,Pathogen ,medicine.drug - Abstract
Corynebacterium species are increasingly recognized as opportunistic pathogens. A growing number of taxonomic studies has yielded a description of numerous new Corynebacterium species, such as those related to the urogenital tract, with Corynebacterium glucuronolyticum found to be rarely involved in genitourinary tract infections, particularly in male individuals.In this report, we describe a urethritis case caused by C. glucuronolyticum in a 37-year-old, apparently healthy male, who complained mild pain in the lower abdomen, with several urinary symptoms. While urethral and semen specimens did not yield positive results for microbiological evaluation, cultures of urine samples revealed the monomicrobial growth on blood-containing media of tiny colonies after 24h of incubation, clearly evident only after 48h of incubation under CO2-enriched atmosphere. Colonies were identified as C. glucuronolyticum both by matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) and 16S rRNA gene sequencing. Oral ciprofloxacin gradually led to clinical improvement and, finally, to a complete recovery, in accordance with microbiological findings. In spite of its infrequent detection, C. glucuronolyticum might be a potential urogenital pathogen in males more commonly that what believed, perhaps due to slow growth leading to underrecognition; we suggest therefore to consider the organism in the differential diagnostics of bacterial diseases of the urinary tract.
- Published
- 2015
35. Stenotrophomonas maltophilia Phenotypic and Genotypic Diversity during a 10-year Colonization in the Lungs of a Cystic Fibrosis Patient
- Author
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Arianna Pompilio, Valentina Crocetta, Dipankar Ghosh, Malabika Chakrabarti, Giovanni Gherardi, Luca Vitali, Fiscarelli Ersilia, and Giovanni Di Bonaventura
- Subjects
0301 basic medicine ,Microbiology (medical) ,Stenotrophomonas maltophilia ,030106 microbiology ,lcsh:QR1-502 ,Virulence ,Biology ,Cystic fibrosis ,Microbiology ,lcsh:Microbiology ,biofilm ,cystic fibrosis ,03 medical and health sciences ,Antibiotic resistance ,Genotype ,medicine ,Colonization ,Original Research ,Genetic heterogeneity ,lung infections ,Biofilm ,medicine.disease ,biology.organism_classification ,chronic infection ,virulence ,antibiotic-resistance - Abstract
The present study was carried out to understand the adaptive strategies developed by S. maltophilia for chronic colonization of the cystic fibrosis (CF) lung. For this purpose, 12 temporally isolated strains from a single CF patient chronically infected over a 10-year period were systematically characterized for growth rate, biofilm formation, motility, mutation frequencies, antibiotic resistance, and pathogenicity. Pulsed-field gel electrophoresis showed over time the presence of 2 distinct groups, each consisting of 2 different pulsotypes. The pattern of evolution followed by S. maltophilia was dependent on pulsotype considered, with strains belonging to pulsotype 1.1 resulting to be the most adapted, being significantly changed in all traits considered. Generally, S. maltophilia adaptation to CF lung leads to increased growth rate and antibiotic resistance, whereas both in vivo and in vitro pathogenicity as well as biofilm formation were decreased. Our results show for the first time that S. maltophilia can successfully adapt to a highly stressful environment such as CF lung by paying a “biological cost”, as suggested by the presence of relevant genotypic and phenotypic heterogeneity within bacterial population. This indicates that S. maltophilia populations are significantly more complex and dynamic than can be described by the analysis of any single isolate and can fluctuate rapidly to changing selective pressures.
- Published
- 2016
36. A new genotyping scheme based on MLVA for inter-laboratory surveillance of Streptococcus pyogenes
- Author
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Valentina Pittiglio, Florigio Lista, Giovanni Gherardi, Lucilla Baldassarri, Christine Pourcel, Giuseppe D'Avenio, Andrea Ciammaruconi, Roberta Creti, Monica Imperi, Dept. of Infectious, Parasitic and Immune-mediated Disease, Istituto Superiore di Sanità [Rome, Italy], Health Corps Italian Army, Department of Molecular Biology, Immunology and Experimental Medicine, Army Medical and Veterinary Research Center, Dept. of Technology and Health, Istituto Superiore di Sanità, Rome, Dept. of Medicine, Università Campus Bio-Medico di Roma / University Campus Bio-Medico of Rome ( UCBM), Institut de Biologie Intégrative de la Cellule (I2BC), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), University Campus Bio-Medico, Rome, Institut de Biologie Intégrative de la Cellule ( I2BC ), Université Paris-Saclay-Centre National de la Recherche Scientifique ( CNRS ) -Commissariat à l'énergie atomique et aux énergies alternatives ( CEA ) -Université Paris-Sud - Paris 11 ( UP11 ), and Istituto Superiore di Sanità (ISS)
- Subjects
0301 basic medicine ,Microbiology (medical) ,Genotyping Techniques ,Streptococcus pyogenes ,[SDV]Life Sciences [q-bio] ,030106 microbiology ,Minisatellite Repeats ,Computational biology ,Biology ,Multiple Loci VNTR Analysis ,medicine.disease_cause ,Microbiology ,03 medical and health sciences ,Bacterial Proteins ,Streptococcal Infections ,medicine ,Pulsed-field gel electrophoresis ,Humans ,Typing ,Inter-laboratory ,Molecular Biology ,Genotyping ,[ SDV ] Life Sciences [q-bio] ,S. pyogenes ,MLVA ,Group A streptococcus ,PFGE ,bacterial infections and mycoses ,Virology ,Electrophoresis, Gel, Pulsed-Field ,emm typing ,Multilocus sequence typing ,Multilocus Sequence Typing ,MLST - Abstract
International audience; A newly developed MLVA seven-loci scheme for Streptococcus pyogenes is described. The method can be successfully applied by using both agarose gel with visual inspections of bands and Lab on Chip technology. The potential of the present MLVA has been tested on a collection of 100 clinical GAS strains representing the most common emm types found in high-income countries plus 18 published gap-free genomes, in comparison to PFGE and MLST. The MLVA analysis defined 30 MLVA types with ten out of the considered 15 emm types exhibiting multiple and specific MLVA types. In only one occasion the same MLVA profile was shared between isolates belonging to two different emm types. A robust congruency between the methods was observed, with MLVA discriminating within clonal complexes as defined by PFGE or MLST. This new MLVA scheme can be adopted as a quick, low-cost and reliable typing method to track the short-term diffusion of GAS clones in inter-laboratory-based surveillance.
- Published
- 2016
37. Identification, antimicrobial resistance and molecular characterization of the human emerging pathogen Streptococcus gallolyticus subsp. pasteurianus
- Author
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Giovanni Di Bonaventura, Giovanni Gherardi, Emanuela Marini, Arianna Pompilio, Bruna Facinelli, Roberta Creti, Claudio Palmieri, and Valentina Crocetta
- Subjects
0301 basic medicine ,Microbiology (medical) ,Adult ,Male ,Streptococcus gallolyticus ,Tetracycline ,030106 microbiology ,Erythromycin ,Biology ,DNA, Ribosomal ,Microbiology ,03 medical and health sciences ,Antibiotic resistance ,RNA, Ribosomal, 16S ,Streptococcal Infections ,Drug Resistance, Bacterial ,Pulsed-field gel electrophoresis ,medicine ,Humans ,Genetic variability ,Aged ,Retrospective Studies ,Aged, 80 and over ,General Medicine ,Sequence Analysis, DNA ,Middle Aged ,Streptococcus bovis ,biology.organism_classification ,16S ribosomal RNA ,Anti-Bacterial Agents ,Bacterial Typing Techniques ,Infectious Diseases ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Female ,medicine.drug - Abstract
This study aimed to retrospectively identify 22 Streptococcus bovis clinical strains based on the new taxonomy, as well as to investigate their antibiotic-resistance and clonality. Strains were identified by Phoenix100 system, 16S rRNA sequencing, and two MALDI-TOF MS platforms (Bruker Biotyper, Vitek MS). Antibiotic resistance was determined both phenotypically and genotypically, and clonality was assessed by PFGE. Most of strains (63.6%) were isolated from urine, and diabetes was the most common underlying disease (31.8%). Phoenix100 system revealed all strains belonged to biotype II, and 16S rRNA sequencing identified all strains as S. gallolyticus subsp pasteurianus (SGSP). Although both MALDI-TOF MS systems correctly identified isolates to the species level, only Bruker Biotyper accurately identified to the subspecies level. Erythromycin-resistant strains (31.8%) were also clindamycin-resistant and positive for erm (B). Strains resistant to tetracycline (68.2%) were also resistant to erythromycin. PFGE showed high genetic variability identifying 17 different pulsotypes, most of which single.
- Published
- 2016
38. Pathogenesis of Streptococcus in Humans
- Author
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Giovanni Gherardi, Lucilla Baldassarri, Roberta Creti, and Alberto Berardi
- Subjects
Pathogenesis ,Streptococcus ,medicine ,Biology ,medicine.disease_cause ,Virology ,Microbiology - Published
- 2016
39. Bacillus cereus Disease Other Than Food-Borne Poisoning
- Author
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Giovanni Gherardi
- Subjects
medicine.medical_specialty ,Food poisoning ,business.industry ,Fulminant ,Surgical wound ,medicine.disease ,Pneumonia ,Endophthalmitis ,Internal medicine ,Bacteremia ,medicine ,Endocarditis ,business ,Intensive care medicine ,Meningitis - Abstract
In addition to food poisoning and airway infections, which are discussed in dedicated chapters, Bacillus cereus has been known to cause a number of systemic and local infections, through the years, involving both immunologically compromised and immunocompetent individuals. Among those most commonly infected, we find neonates, intravenous drug abusers, patients sustaining traumatic or surgical wounds, and those having indwelling catheters. The spectrum of diseases includes fulminant bacteremia, central nervous system involvement (with meningitis and brain abscesses), endophthalmitis, pneumonia, and gas gangrene-like cutaneous infections, just to name a few.
- Published
- 2016
40. Contributors
- Author
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Edoardo Carretto, Stefano Colombo, Paolo Fazii, Giovanni Gherardi, Dallas G. Hoover, Sarah M. Markland, Roberta Marrollo, Daniela Onofrillo, Eugenio Pontieri, Vincenzo Savini, and Rosa Visiello
- Published
- 2016
41. Interspecies mobilization of an erm(T)-carrying plasmid of Streptococcus dysgalactiae subsp. equisimilis by a coresident ICE of the ICESa2603 family
- Author
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Monica Imperi, Bruna Facinelli, Gloria Magi, Roberta Creti, Giovanni Gherardi, Lucilla Baldassarri, and Claudio Palmieri
- Subjects
Microbiology (medical) ,Streptococcus suis ,Streptococcus pyogenes ,Molecular Sequence Data ,Population ,Biology ,medicine.disease_cause ,Streptococcus agalactiae ,Microbiology ,Plasmid ,Bacterial Proteins ,Species Specificity ,medicine ,Humans ,Pharmacology (medical) ,education ,Pharmacology ,Genetics ,education.field_of_study ,Base Sequence ,Streptococcus ,Drug Resistance, Microbial ,Methyltransferases ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,Erythromycin ,Infectious Diseases ,Mobile genetic elements ,Streptococcus dysgalactiae ,Plasmids - Abstract
OBJECTIVES: The recently documented presence of almost identical, small, non-self-transmissible, erm(T)-carrying plasmids in clonally unrelated erythromycin-resistant isolates of Streptococcus pyogenes and Streptococcus agalactiae suggests that these plasmids somehow circulate in the streptococcal population. The objective of this study was to characterize the erm(T)-carrying genetic element in a clinical isolate of Streptococcus dysgalactiae subsp. equisimilis (Sde5580) and to provide a possible explanation for the spread of erm(T)-carrying plasmids in streptococci. METHODS: The erm(T)-carrying element of Sde5580 was investigated by plasmid analysis, PCR experiments and sequencing. Transfer and retransfer experiments were performed using S. pyogenes, S. agalactiae and Streptococcus suis strains as recipients and by selection in the presence of suitable drug concentrations. Transconjugants were analysed by SmaI-macrorestriction analysis. Genetic studies also included PCR-restriction fragment length polymorphism analysis using HindIII endonuclease. RESULTS: Sde5580 contained two mobile genetic elements: a 4950 bp erm(T)-carrying plasmid (p5580) almost identical to the non-self-transmissible erm(T)-carrying plasmids of S. pyogenes and S. agalactiae mentioned above, and an ~63 kb cadC/cadA-carrying integrative and conjugative element (ICESde3396-like) of the ICESa2603 family. p5580 was transferable at high frequency to the recipients of all three species through in trans mobilization by the coresident ICESde3396-like element. p5580 and ICESde3396-like were able to be transferred either separately or together. CONCLUSIONS: This is the first evidence of horizontal transfer of an erm(T)-carrying plasmid between streptococci. In trans mobilization by coresident ICEs may be one mechanism for the spread of erm(T)-carrying plasmids in the streptococcal population.
- Published
- 2012
42. Tuberculous Meningoencephalitis in a Patient with Hairy Cell Leukemia in Complete Remission
- Author
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Ombretta Annibali, Giuseppe Avvisati, A Paviglianiti, Elisabetta Cerchiara, A. Onetti Muda, Valeria Tomarchio, Antonella Bianchi, Katia Girardi, Francesco Marchesi, M Cirillo, M.C. Tirindelli, Giovanni Gherardi, and C Miglio
- Subjects
Male ,medicine.medical_specialty ,Tuberculosis ,medicine.medical_treatment ,Antineoplastic Agents ,Gastroenterology ,Mycobacterium tuberculosis ,Fatal Outcome ,Meningoencephalitis ,Internal medicine ,medicine ,Humans ,Hairy cell leukemia ,Cladribine ,Immunosuppression Therapy ,Leukemia, Hairy Cell ,Chemotherapy ,biology ,business.industry ,Immunosuppression ,General Medicine ,Middle Aged ,medicine.disease ,biology.organism_classification ,Virology ,Tuberculosis, Meningeal ,business ,medicine.drug ,Rare disease - Abstract
Tuberculous meningoencephalitis is a rare disease associated with high morbidity and mortality. We report a patient with hairy cell leukemia in complete remission who, after a single cycle of chemotherapy with cladribine, presented fever and neurological deficits. Laboratory diagnosis of tuberculous meningoencephalitis was made by polymerase chain reaction testing for Mycobacterium tuberculosis in cerebrospinal fluid. Despite the prompt institution of antitubercular-therapy, patient's general condition did not improve and he died. Mycobacterial infection should be considered in patients with intra-cranial lesions, affected by hematological malignancies and persistent immunosuppression.
- Published
- 2012
43. Microbiological evaluation of tissue expanders in patients who had first stage breast reconstruction
- Author
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Tommaso Petitti, Giovanni Francesco Marangi, Paolo Persichetti, Marika Langella, Giovanni Gherardi, Pierluigi Gigliofiorito, and Giordano Dicuonzo
- Subjects
Adult ,Reoperation ,medicine.medical_specialty ,Prosthesis-Related Infections ,Mammaplasty ,medicine.medical_treatment ,Breast Neoplasms ,Risk Assessment ,Cohort Studies ,Breast cancer ,Implant Capsular Contracture ,Staphylococcus epidermidis ,medicine ,Humans ,Asymptomatic Infections ,Breast augmentation ,Mastectomy ,Radical mastectomy ,Aged ,Retrospective Studies ,Subclinical infection ,business.industry ,Incidence ,Tissue Expansion Devices ,Radiotherapy Dosage ,Capsular contracture ,Middle Aged ,Staphylococcal Infections ,medicine.disease ,Surgery ,Female ,Radiotherapy, Adjuvant ,business ,Breast reconstruction ,Quadrantectomy ,Follow-Up Studies - Abstract
Capsular contracture is one of the most common complications associated to the use of foreign materials in reconstruction after mastectomy and aesthetic breast augmentation. Many risk factors, causes, and conditions seldom associated with capsular contracture have been identified but none of these have been confirmed by published data. Among these, subclinical infections (particularly those caused by Staphylococcus epidermidis) seem to be one of the most likely. In the present study we analysed the correlation between capsular contracture and the incidence of periprosthetic subclinical infection in two groups of patients who had first-stage breast reconstruction: one group of patients who were not having adjuvant or neoadjuvant radiotherapy for breast cancer (n = 25) and a second group of patients who had had quadrantectomy and radiotherapy (QUART) and successive radical mastectomy for recurrent disease (n = 25). Patients who had radiotherapy had a significantly higher incidence of subclinical infection (n = 13) than patients who did not (n = 1), but there was no statistical correlation between subclinical infection and capsular contracture. Subclinical infections seemed to present at a later stage and under certain local and systemic circumstances that favoured bacterial growth, such as radiotherapy.
- Published
- 2010
44. Analysis of methods commonly used for glycopeptide and oxazolidinone susceptibility testing in Enterococcus faecium isolates
- Author
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G. Lorino, Giordano Dicuonzo, M.C. Ghezzi, Giammarco Raponi, and Giovanni Gherardi
- Subjects
DNA, Bacterial ,Microbiology (medical) ,Enterococcus faecium ,Microbial Sensitivity Tests ,Drug resistance ,Polymerase Chain Reaction ,Microbiology ,chemistry.chemical_compound ,Bacterial Proteins ,Vancomycin ,23S ribosomal RNA ,Acetamides ,medicine ,Humans ,Carbon-Oxygen Ligases ,Oxazolidinones ,Etest ,biology ,Teicoplanin ,Broth microdilution ,Glycopeptides ,Linezolid ,General Medicine ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,biology.organism_classification ,Virology ,Anti-Bacterial Agents ,RNA, Ribosomal, 23S ,chemistry ,bacteria ,Polymorphism, Restriction Fragment Length ,medicine.drug - Abstract
The susceptibility to teicoplanin, vancomycin and linezolid of 30 clinical isolates of Enterococcus faecium was tested by Vitek 2, Phoenix, Etest, broth microdilution and disc diffusion tests. The vanA and vanB resistance genes and the 23S rRNA gene G2576T mutation were detected by PCR and PCR-RFLP, respectively. Resistance rates to teicoplanin ranged from 3 % for Vitek 2 to 57.6 % for the Phoenix test, and those to vancomycin ranged from 56.7 % for Vitek 2 to 86.7 % for the Phoenix test. Only two out of 25 strains carrying the vanA gene were univocally recognized as the VanA phenotype. The only strain with the G2576T mutation did not carry the vanA gene and showed resistance to linezolid by the disc diffusion, Vitek 2 and broth dilution methods (MIC >8 μg ml−1), but was susceptible when tested with the Phoenix test and Etest (MIC ≤4 μg ml−1). Therefore, the resistance to glycopeptides and linezolid was not univocally detected by the susceptibility testing methods used in this study.
- Published
- 2010
45. Preface
- Author
-
Giovanni Gherardi
- Subjects
Pharmacology ,Infectious Diseases - Published
- 2018
46. Comparative Study of Different Techniques for the Sterilization of Poly-L-lactide Electrospun Microfibers: Effectiveness vs. Material Degradation
- Author
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Silvia Licoccia, Giovanni Gherardi, Matteo Centola, Marcella Trombetta, Alberto Rainer, Jorge A. Genovese, and Cristiano Spadaccio
- Subjects
Scaffold ,Hot Temperature ,business.product_category ,Materials science ,Ultraviolet Rays ,Polyesters ,0206 medical engineering ,Biomedical Engineering ,Medicine (miscellaneous) ,Bioengineering ,Nanotechnology ,02 engineering and technology ,Biomaterials ,Tissue engineering ,Material Degradation ,Absorbable Implants ,Spectroscopy, Fourier Transform Infrared ,Microfiber ,Poly-L-lactide ,Humans ,Ethanol ,Tissue Engineering ,Tissue Scaffolds ,Settore CHIM/07 - Fondamenti Chimici delle Tecnologie ,Sterilization ,Biomaterial ,Hydrogen Peroxide ,General Medicine ,Sterilization (microbiology) ,021001 nanoscience & nanotechnology ,020601 biomedical engineering ,Electrospinning ,0210 nano-technology ,business ,Biomedical engineering - Abstract
Electrospinning of biopolymeric scaffolds is a new and effective approach for creating replacement tissues to repair defects and/or damaged tissues with direct clinical application. However, many hurdles and technical concerns regarding biological issues, such as cell retention and the ability to grow, still need to be overcome to gain full access to the clinical arena. Interaction with the host human tissues, immunogenicity, pathogen transmission as well as production costs, technical expertise, and good manufacturing and laboratory practice requirements call for careful consideration when aiming at the production of a material that is available off-the-shelf, to be used immediately in operative settings. The issue of sterilization is one of the most important steps for the clinical application of these scaffolds. Nevertheless, relatively few studies have been performed to systematically investigate how sterilization treatments may affect the properties of electrospun polymers for tissue engineering. This paper presents the results of a comparative study of different sterilization techniques applied to an electrospun poly-L-lactide scaffold: soaking in absolute ethanol, dry oven and autoclave treatments, UV irradiation, and hydrogen peroxide gas plasma treatment. Morphological and chemical characterization was coupled with microbiological sterility assay to validate the examined sterilization techniques in terms of effectiveness and modifications to the scaffold. The results of this study reveal that UV irradiation and hydrogen peroxide gas plasma are the most effective sterilization techniques, as they ensure sterility of the electrospun scaffolds without affecting their chemical and morphological features.
- Published
- 2010
47. Macrolide resistance genotypes and phenotypes among erythromycin-resistant clinical isolates ofStaphylococcus aureusand coagulase-negative staphylococci, Italy: Table 1
- Author
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Giovanni Gherardi, Laura Fico, G. Lorino, Lucia Florio, and Giordano Dicuonzo
- Subjects
Microbiology (medical) ,medicine.drug_class ,Immunology ,Telithromycin ,Clindamycin ,Erythromycin ,General Medicine ,Biology ,medicine.disease_cause ,Microbiology ,Virology ,Macrolide Antibiotics ,Infectious Diseases ,Staphylococcus aureus ,Genotype ,medicine ,Pulsed-field gel electrophoresis ,Immunology and Allergy ,Coagulase ,medicine.drug - Abstract
One hundred macrolide-resistant staphylococcal isolates from clinically relevant infections in Italy during a 19-month period were studied. Four distinct resistance phenotypes were observed using the triple-disk induction test (erythromycin, clindamycin, telithromycin): the cMLS(B) phenotype (24 isolates); the iMLS(B) phenotype (41 isolates); the MS phenotype (three isolates); and the iMTS phenotype (erythromycin-induced telithromycin resistance) (32 isolates). ermC and ermA genes predominated within erythromycin-resistant Staphylococcus aureus isolates with iMLS(B) phenotype and cMLS(B) phenotype, respectively. Among erythromycin-resistant CoNS isolates, half of the strains showed the iMTS or MS/msrA association, and ermC gene predominated among isolates with MLS(B) phenotype. By pulsed-field gel electrophoresis, high genetic heterogeneity was observed among the isolates studied. Both independent acquisition of macrolide resistance genes and spread of specific resistant clones were observed. Association between certain clonal types and specific types of infection could be detected. To our knowledge, this is the first report on characterization of erythromycin-resistant staphylococci in Italy.
- Published
- 2009
48. Pulsed field gel electrophoresis of group A streptococci
- Author
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Luca Agostino, Vitali, Giovanni, Gherardi, and Dezemona, Petrelli
- Subjects
DNA, Bacterial ,Streptococcus pyogenes ,Streptococcal Infections ,Restriction Mapping ,Humans ,Chromosomes, Bacterial ,Serotyping ,Electrophoresis, Gel, Pulsed-Field - Abstract
Here we describe the protocols to perform PFGE analysis of chromosomal DNA from the bacterial species Streptococcus pyogenes (group A streptococcus, GAS) after digestion with the restriction enzyme SmaI. Large parts of the procedures are suitable for application to DNA digested with other restriction enzymes as well. We have put an effort to present extensions to solve possible limitations to the discriminatory power of the method in the specific case of S. pyogenes.
- Published
- 2015
49. Decline in macrolide resistance rates among Streptococcus pyogenes causing pharyngitis in children isolated in Italy
- Author
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Giovanni Gherardi, J. Bellesi, A. Repetto, Dezemona Petrelli, Luca Agostino Vitali, P. Bernaschi, M. C. Di Luca, and F. Pimentel de Araujo
- Subjects
Male ,Microbiology (medical) ,Adolescent ,Tetracycline ,Streptococcus pyogenes ,Erythromycin ,Microbial Sensitivity Tests ,Biology ,medicine.disease_cause ,Article ,law.invention ,Microbiology ,law ,Streptococcal Infections ,Drug Resistance, Bacterial ,medicine ,Pulsed-field gel electrophoresis ,Humans ,Child ,Polymerase chain reaction ,Streptococcus ,Clindamycin ,Pharyngitis ,General Medicine ,Anti-Bacterial Agents ,Infectious Diseases ,Italy ,Child, Preschool ,Female ,medicine.symptom ,medicine.drug - Abstract
Macrolides are often used to treat group A streptococcus (GAS) infections, but their resistance rates reached high proportions worldwide. The aim of the present study was to give an update on the characteristics and contemporary prevalence of macrolide-resistant pharyngeal GAS in Central Italy. A total of 592 isolates causing pharyngitis in children were collected in the period 2012–2013. Clonality was assessed by emm typing and pulsed-field gel electrophoresis (PFGE) for all macrolide-resistant strains and for selected susceptible isolates. Genetic determinants of resistance were screened by polymerase chain reaction (PCR). Forty-four GAS were erythromycin-resistant (7.4 %). Among them, 52.3 % and 50 % were clindamycin- and tetracycline-resistant, respectively. erm(B)-positive isolates (52.3 %) expressed the constitutive cMLSB phenotype. mef(A) and its associated M phenotype were recorded in 40.9 % of the cases. The remaining erm(A)-positive isolates expressed the iMLSB phenotype. Seventeen tetracycline-resistant isolates carried tet(M) and five isolates carried tet(O). Twenty-five emm types were found among all strains, with the predominance of emm types 12, 89, 1, and 4. Eleven emm types and 12 PFGE clusters characterized macrolide-resistant strains, with almost two-thirds belonging to emm12, emm4, and emm11. Macrolide-susceptible and -resistant emm types 12, 89, 11, and 4 shared related PFGE profiles. There was a dramatic decline in macrolide resistance in Central Italy among pharyngeal GAS isolates in 2012–2013 when compared to previous studies from the same region (p
- Published
- 2015
50. Molecular characterisation and clonal analysis of group A streptococci causing pharyngitis among paediatric patients in Palermo, Italy
- Author
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G. Lorino, F. Merlino, Giordano Dicuonzo, M. De Cesaris, Silvia Angeletti, S. Maringhini, N. Graziano, F. Di Bernardo, and Giovanni Gherardi
- Subjects
DNA, Bacterial ,Microbiology (medical) ,Adolescent ,Gene Transfer, Horizontal ,Genotype ,macrolide resistance ,Streptococcus pyogenes ,Exotoxins ,Microbial Sensitivity Tests ,medicine.disease_cause ,Group A ,Polymerase Chain Reaction ,Microbiology ,Bacterial Proteins ,stomatognathic system ,Streptococcal Infections ,Drug Resistance, Bacterial ,medicine ,Humans ,Typing ,group A streptococci ,Child ,Gene ,spe genes ,Antibacterial agent ,Antigens, Bacterial ,biology ,Membrane Proteins ,Pharyngitis ,General Medicine ,Sequence Analysis, DNA ,Streptococcaceae ,biology.organism_classification ,humanities ,stomatognathic diseases ,Phenotype ,Infectious Diseases ,Italy ,emm typing ,Child, Preschool ,Macrolides ,sof genes ,medicine.symptom ,Carrier Proteins ,Bacterial Outer Membrane Proteins ,Peptide Hydrolases - Abstract
Group A streptococci ( n = 123), isolated consecutively from paediatric patients with pharyngitis from Palermo, Italy, were analysed. The emm and sof genes were sequenced, the presence of the speA and speC genes was investigated, and the macrolide resistance phenotypes and genotypes were determined. A limited number of emm /sof genotypes was found, and the most prevalent types were different from those found in a previous study from Rome. Macrolide resistance was found in the most prevalent clones, suggesting that the spread of mobile antibiotic resistance genes among the fittest clones in the community was the main mechanism influencing macrolide resistance rates in different emm types.
- Published
- 2006
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