839 results on '"C. Buck"'
Search Results
2. Contribution of Xpert® MTB/RIF to pediatric TB diagnosis in Mozambique
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C. M. Mutemba, A. Schindele, I. Munyangaju, N. Ramanlal, I. Manhiça, B. José, and W. C. Buck
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Pulmonary and Respiratory Medicine ,Infectious Diseases - Published
- 2023
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3. A critical review of the application of polymer of low concern regulatory criteria to fluoropolymers II: Fluoroplastics and fluoroelastomers
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Stephen H. Korzeniowski, Robert C. Buck, Robin M. Newkold, Ahmed El kassmi, Evan Laganis, Yasuhiko Matsuoka, Bertrand Dinelli, Severine Beauchet, Frank Adamsky, Karl Weilandt, Vijay Kumar Soni, Deepak Kapoor, Priyanga Gunasekar, Marco Malvasi, Giulio Brinati, and Stefana Musio
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Geography, Planning and Development ,General Medicine ,General Environmental Science - Abstract
Fluoropolymers are a distinct class of per- and polyfluoroalkyl substances (PFAS), high molecular weight (MW) polymers with fluorine attached to their carbon-only backbone. Fluoropolymers possess a unique combination of properties and unmatched functional performance critical to the products and manufacturing processes they enable and are irreplaceable in many uses. Fluoropolymers have documented safety profiles; are thermally, biologically, and chemically stable, negligibly soluble in water, nonmobile, nonbioavailable, nonbioaccumulative, and nontoxic. Although fluoropolymers fit the PFAS structural definition, they have very different physical, chemical, environmental, and toxicological properties when compared with other PFAS. This study describes the composition, uses, performance properties, and functionalities of 14 fluoropolymers, including fluoroplastics and fluoroelastomers, and presents data to demonstrate that they satisfy the widely accepted polymer hazard assessment criteria to be considered polymers of low concern (PLC). The PLC criteria include physicochemical properties, such as molecular weight, which determine bioavailability and warn of potential hazard. Fluoropolymers are insoluble (e.g., water, octanol) solids too large to migrate into the cell membrane making them nonbioavailable, and therefore, of low concern from a human and environmental health standpoint. Further, the study results demonstrate that fluoropolymers are a distinct and different group of PFAS and should not be grouped with other PFAS for hazard assessment or regulatory purposes. When combined with an earlier publication by Henry et al., this study demonstrates that commercial fluoropolymers are available from the seven participating companies that meet the criteria to be considered PLC, which represent approximately 96% of the global commercial fluoropolymer market. Integr Environ Assess Manag 2022;00:1-29. © 2022 The Authors. Integrated Environmental Assessment and Management published by Wiley Periodicals LLC on behalf of Society of Environmental ToxicologyChemistry (SETAC).
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- 2022
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4. Evaluation of a Novel Digital Stethoscope Prototype in a Low-resource Setting: Expert Listening Panel Agreement With Conventional Auscultation in Hospitalized Malawian Children With Severe Pneumonia
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Z. Smith, N. Hoekstra, T. Mvalo, I. McLane, A. Kala, M. Chiume, C. Verwey, D. Olson, C. Buck, J. Mulindwa, E. Fitzgerald, M. Chagomerana, M. Elhilali, M. Hosseinipour, and E.D. McCollum
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- 2023
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5. Supplementary Methods from AXL Inhibition in Macrophages Stimulates Host-versus-Leukemia Immunity and Eradicates Naïve and Treatment-Resistant Leukemia
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Hind Medyouf, Sourav Ghosh, Carla V. Rothlin, Katharina S. Götze, Halvard Bonig, Jacques Ghysdael, Vladimir Benes, Uwe Platzbecker, Tobias Schmid, Andreas Weigert, Marc Schmitz, Omar Abdel-Wahab, Christine Tran Quang, Elisabeth Strack, Eiman Elwakeel, Jörn Meinel, Anne-Sophie Kubasch, Patrick N. Harter, Jenny Roesler, Julia Slotta-Huspenina, Bianka Baying, Jonathan JM. Landry, Michèle C. Buck, Emily Alberto, Petra Dinse, Maresa Weitmann, Anna-Lena Schäfer, Luise Müller, Ioanna Tsoukala, Carolin Wachtel, Ewelina Czlonka, Ivan-Maximilano Kur, Alexander Schäffer, Aleksandra Nevmerzhitskaya, Devona Soetopo, Arnaud Descot, and Irene Tirado-Gonzalez
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Supplementary Methods
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- 2023
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6. Data from AXL Inhibition in Macrophages Stimulates Host-versus-Leukemia Immunity and Eradicates Naïve and Treatment-Resistant Leukemia
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Hind Medyouf, Sourav Ghosh, Carla V. Rothlin, Katharina S. Götze, Halvard Bonig, Jacques Ghysdael, Vladimir Benes, Uwe Platzbecker, Tobias Schmid, Andreas Weigert, Marc Schmitz, Omar Abdel-Wahab, Christine Tran Quang, Elisabeth Strack, Eiman Elwakeel, Jörn Meinel, Anne-Sophie Kubasch, Patrick N. Harter, Jenny Roesler, Julia Slotta-Huspenina, Bianka Baying, Jonathan JM. Landry, Michèle C. Buck, Emily Alberto, Petra Dinse, Maresa Weitmann, Anna-Lena Schäfer, Luise Müller, Ioanna Tsoukala, Carolin Wachtel, Ewelina Czlonka, Ivan-Maximilano Kur, Alexander Schäffer, Aleksandra Nevmerzhitskaya, Devona Soetopo, Arnaud Descot, and Irene Tirado-Gonzalez
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Acute leukemias are systemic malignancies associated with a dire outcome. Because of low immunogenicity, leukemias display a remarkable ability to evade immune control and are often resistant to checkpoint blockade. Here, we discover that leukemia cells actively establish a suppressive environment to prevent immune attacks by co-opting a signaling axis that skews macrophages toward a tumor-promoting tissue repair phenotype, namely the GAS6/AXL axis. Using aggressive leukemia models, we demonstrate that ablation of the AXL receptor specifically in macrophages, or its ligand GAS6 in the environment, stimulates antileukemic immunity and elicits effective and lasting natural killer cell– and T cell–dependent immune response against naïve and treatment-resistant leukemia. Remarkably, AXL deficiency in macrophages also enables PD-1 checkpoint blockade in PD-1–refractory leukemias. Finally, we provide proof-of-concept that a clinical-grade AXL inhibitor can be used in combination with standard-of-care therapy to cure established leukemia, regardless of AXL expression in malignant cells.Significance:Alternatively primed myeloid cells predict negative outcome in leukemia. By demonstrating that leukemia cells actively evade immune control by engaging AXL receptor tyrosine kinase in macrophages and promoting their alternative priming, we identified a target which blockade, using a clinical-grade inhibitor, is vital to unleashing the therapeutic potential of myeloid-centered immunotherapy.This article is highlighted in the In This Issue feature, p. 2659
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- 2023
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7. Supplementary Figures from AXL Inhibition in Macrophages Stimulates Host-versus-Leukemia Immunity and Eradicates Naïve and Treatment-Resistant Leukemia
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Hind Medyouf, Sourav Ghosh, Carla V. Rothlin, Katharina S. Götze, Halvard Bonig, Jacques Ghysdael, Vladimir Benes, Uwe Platzbecker, Tobias Schmid, Andreas Weigert, Marc Schmitz, Omar Abdel-Wahab, Christine Tran Quang, Elisabeth Strack, Eiman Elwakeel, Jörn Meinel, Anne-Sophie Kubasch, Patrick N. Harter, Jenny Roesler, Julia Slotta-Huspenina, Bianka Baying, Jonathan JM. Landry, Michèle C. Buck, Emily Alberto, Petra Dinse, Maresa Weitmann, Anna-Lena Schäfer, Luise Müller, Ioanna Tsoukala, Carolin Wachtel, Ewelina Czlonka, Ivan-Maximilano Kur, Alexander Schäffer, Aleksandra Nevmerzhitskaya, Devona Soetopo, Arnaud Descot, and Irene Tirado-Gonzalez
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Supplementary Figures and Figure legends
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- 2023
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8. A Review of Bismuth(III)-Based Materials for Remediation of Contaminated Sites
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Tatiana G. Levitskaia, Nikolla P. Qafoku, Mark E. Bowden, R. Matthew Asmussen, Edgar C. Buck, Vicky L. Freedman, and Carolyn I. Pearce
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Atmospheric Science ,Space and Planetary Science ,Geochemistry and Petrology - Published
- 2022
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9. Autophagy in mesenchymal progenitors protects mice against bone marrow failure after severe intermittent stress
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Dirk Strunk, Terry P Yamaguchi, Sandra Romero Marquez, Rouzanna Istvanffy, Michèle C. Buck, Jennifer Rivière, Katharina Brandstetter, Franziska Hettler, Matthias Kieslinger, Akiko Shimamura, Florian Bassermann, Mehmet Sacma, Hartmut Geiger, Erik Hameister, Jürgen Ruland, Christina Schreck, Heinrich Leonhardt, Theresa Landspersky, Robert A.J. Oostendorp, Judith S. Hecker, Kasiani C. Myers, Matthias Schiemann, Marilena Götz, Romina Ludwig, Martin Wolf, and Katharina Götze
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Stress fiber ,Immunology ,Biology ,Biochemistry ,Wnt-5a Protein ,Mice ,Autophagy ,medicine ,Animals ,Humans ,Progenitor cell ,Cells, Cultured ,Progenitor ,Mesenchymal stem cell ,Mesenchymal Stem Cells ,Cell Biology ,Hematology ,Bone Marrow Failure Disorders ,Hematopoietic Stem Cells ,Hematopoiesis ,Cell biology ,Oxidative Stress ,Haematopoiesis ,medicine.anatomical_structure ,Blood Commentary ,Bone marrow ,Stem cell - Abstract
The cellular mechanisms required to ensure homeostasis of the hematopoietic niche and the ability of this niche to support hematopoiesis upon stress remain elusive. We here identify Wnt5a in Osterix+ mesenchymal progenitor and stem cells (MSPCs) as a critical factor for niche-dependent hematopoiesis. Mice lacking Wnt5a in MSPCs suffer from stress-related bone marrow (BM) failure and increased mortality. Niche cells devoid of Wnt5a show defective actin stress fiber orientation due to an elevated activity of the small GTPase CDC42. This results in incorrect positioning of autophagosomes and lysosomes, thus reducing autophagy and increasing oxidative stress. In MSPCs from patients from BM failure states which share features of peripheral cytopenia and hypocellular BM, we find similar defects in actin stress fiber orientation, reduced and incorrect colocalization of autophagosomes and lysosomes, and CDC42 activation. Strikingly, a short pharmacological intervention to attenuate elevated CDC42 activation in vivo in mice prevents defective actin-anchored autophagy in MSPCs, salvages hematopoiesis and protects against lethal cytopenia upon stress. In summary, our study identifies Wnt5a as a restriction factor for niche homeostasis by affecting CDC42-regulated actin stress-fiber orientation and autophagy upon stress. Our data further imply a critical role for autophagy in MSPCs for adequate support of hematopoiesis by the niche upon stress and in human diseases characterized by peripheral cytopenias and hypocellular BM.
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- 2022
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10. A microfluidic electrochemical cell for studying the corrosion of uranium dioxide (UO2)
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Jennifer Yao, Nabajit Lahiri, Shalini Tripathi, Shawn L. Riechers, Eugene S. Ilton, Sayandev Chatterjee, and Edgar C. Buck
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General Chemical Engineering ,General Chemistry - Abstract
Highlight of the multimodal characterization of corrosion behaviour of microgram quantities of UO2, enabled by a novel particle-attached microfluidic electrochemical cell.
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- 2022
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11. CubeSat Altimeter Constellation Systems: Performance Analysis and Methodology
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Peter Hoogeboom, Jian Guo, Paco Lopez Dekker, C. Buck, Sung-Hoon Mok, and Yuanhao Li
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Computer science ,Weather forecasting ,Sampling (statistics) ,Sea-surface height ,computer.software_genre ,law.invention ,Radar altimeter ,law ,General Earth and Planetary Sciences ,CubeSat ,Altimeter ,Electrical and Electronic Engineering ,Image resolution ,computer ,Remote sensing ,Constellation - Abstract
Multiple CubeSat altimeters can work independently or corporately to form altimeter constellations. Different configurations of the constellations can acquire distinguished advantages: improved spatial/temporal sampling and high cross-track resolution, which will be helpful for observations of oceanic small-scale structures and weather forecasting. Compared to single conventional altimeters, CubeSat altimeter constellations may achieve better performances with lower costs. To fully understand these systems, this article focuses on the performance analysis and methodology for CubeSat altimeter constellations. Besides the typical analyses of the resolution, revisit, and absolute sea surface height (SSH) accuracy, the performance analysis was conducted by considering the characteristics of multiple measurements provided by CubeSat altimeter constellations. Local and global spatial sampling performances are investigated for various constellations and compared by sampling density and swath size. Moreover, relative SSH accuracy is introduced and evaluated based on the spatial structure functions of errors to effectively evaluate the measurement performance. Related system requirements on power, delta-v, etc., to achieve the performance are also discussed, which ensures that the analysis fits the boundary conditions of implementation. Finally, different concepts of the CubeSat altimeter constellations are compared, where their limitations and possible solutions are also discussed.
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- 2022
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12. Choosing the source of healthy controls for studies on myeloid malignancies: all bone marrow cells are created equal, but some are more equal than others
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Jennifer Rivière, Jennifer Hock, Michèle C. Buck, Judith S. Hecker, Katharina S. Götze, and Mark van der Garde
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Molecular Medicine ,Medicine (miscellaneous) ,Cell Biology ,Biochemistry, Genetics and Molecular Biology (miscellaneous) - Abstract
Bone marrow samples from discarded femoral heads are often used as healthy controls in studies investigating the in vitro characteristics of cells from patients with hematologic malignancies. Since patient samples are usually derived from iliac crest aspirates, this carries the risk that the properties of the cells from both sources might be different due to the site and method of harvesting. Comparing BM cells from iliac crest aspirates and femoral heads from age-matched healthy donors, we show that, while mesenchymal stromal cells have indistinguishable properties between both sources, hematopoietic stem and progenitor cells (HSPC) from femoral heads show a considerable proliferative advantage in vitro. These data therefore suggest that experiments comparing leukemic cells from the iliac crest to healthy HSPC obtained from femoral heads should be interpreted with caution.
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- 2023
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13. Grass shrimp parasites use complimentary life histories to avoid a conflict of interest
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Robert P Finn and Julia C Buck
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A conflict of interest occurs when parasites manipulate the behavior of their host in contradictory ways. In grass shrimp (Palaemonetes pugio), trematode parasites cause the shrimp to be more active than usual around predators, while bopyrid isopod parasites elicit the opposite response. Since these parasites are altering the host’s behavior in opposing directions, a conflict of interest should occur in doubly infected shrimp. Natural selection should favor attempts to resolve this conflict through avoidance, killing, or sabotage. In a field survey of shrimp populations in four tidal creeks in the Cape Fear River, we found a significant negative association between the two parasites. Parasite abundance was negatively correlated in differently sized hosts, suggesting avoidance as a mechanism. Subsequent mortality experiments showed no evidence of early death of doubly infected hosts. In behavior trials, doubly infected shrimp did not show significantly different behavior from other infection statuses, suggesting that neither parasite sabotages the manipulation of the other. Taken together, our results suggest that rather than sabotaging one another directly, bopyrid and trematode parasites reduce conflict by preferentially infecting differently sized hosts. Because grass shrimp exist at high biomass in salt marsh ecosystems and are infected at high prevalence, our findings have implications for ecosystem structure and function.
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- 2023
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14. CHIP and hips: clonal hematopoiesis is common in patients undergoing hip arthroplasty and is associated with autoimmune disease
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Martina Rauner, Lorenz C. Hofbauer, Judith S. Hecker, Katharina Götze, Elena Tsourdi, A. Roth, Martin Nolde, Luise Hartmann, Karsten Spiekermann, Carsten Marr, Susann Winter, Bianka Ksienzyk, Marie Schneider, Uwe Platzbecker, Katja Sockel, Klaus H. Metzeler, Dominikus Hausmann, Luise Fischer, Florian Bassermann, Mark van der Garde, Maria Solovey, Frank Ziemann, A.S. Kubasch, Maja Rothenberg-Thurley, Alexander C. Paulus, Michèle C. Buck, Jörg Lützner, and Jennifer Rivière
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Adult ,Male ,medicine.medical_specialty ,Arthroplasty, Replacement, Hip ,Immunology ,Disease ,Osteoarthritis ,Biochemistry ,Gastroenterology ,Autoimmune Diseases ,DNA Methyltransferase 3A ,Dioxygenases ,Pathogenesis ,Young Adult ,Immune system ,Gene Frequency ,Internal medicine ,medicine ,Humans ,Mean corpuscular volume ,Cells, Cultured ,Aged ,Aged, 80 and over ,Autoimmune disease ,medicine.diagnostic_test ,business.industry ,Cell Biology ,Hematology ,Odds ratio ,Middle Aged ,medicine.disease ,DNA-Binding Proteins ,Hematologic disease ,Mutation ,Clonal Hematopoiesis ,business - Abstract
Clonal hematopoiesis (CH) is an age-related condition predisposing to blood cancer and cardiovascular disease (CVD). Murine models demonstrate CH-mediated altered immune function and proinflammation. Low-grade inflammation has been implicated in the pathogenesis of osteoarthritis (OA), the main indication for total hip arthroplasty (THA). THA-derived hip bones serve as a major source of healthy hematopoietic cells in experimental hematology. We prospectively investigated frequency and clinical associations of CH in 200 patients without known hematologic disease who were undergoing THA. Prevalence of CH was 50%, including 77 patients with CH of indeterminate potential (CHIP, defined as somatic variant allele frequencies [VAFs] ≥2%), and 23 patients harboring CH with lower mutation burden (VAF, 1% to 2%). Most commonly mutated genes were DNMT3A (29.5%), TET2 (15.0%), and ASXL1 (3.5%). CHIP is significantly associated with lower hemoglobin, higher mean corpuscular volume, previous or present malignant disease, and CVD. Strikingly, we observed a previously unreported association of CHIP with autoimmune diseases (AIDs; multivariable adjusted odds ratio, 6.6; 95% confidence interval, 1.7-30; P = .0081). These findings underscore the association between CH and inflammatory diseases. Our results have considerable relevance for managing patients with OA and AIDs or mild anemia and question the use of hip bone–derived cells as healthy experimental controls.
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- 2021
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15. Comprehensive characterization of central BCL-2 family members in aberrant eosinophils and their impact on therapeutic strategies
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Michèle C. Buck, Philipp Moog, Knut Brockow, Andreas Reiter, Lars Buschhorn, Veronika Dill, Caterina Branca, Celina Wagner, Katharina Götze, Khalid Shoumariyeh, Ulrike Höckendorf, Timo O Odinius, Richard T. Hauch, Juliana Schwaab, Philipp J. Jost, Florian Bassermann, Stefanie Jilg, and Marta Dechant
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Cancer Research ,Myeloid ,Hypereosinophilia ,Apoptosis ,Antineoplastic Agents ,HL-60 Cells ,Thiophenes ,Hypereosinophilic syndrome ,Venetoclax ,Original Article - Cancer Research ,CEL-NOS ,EGPA ,BH3-mimetics ,MCL1 ,S63845 ,hemic and lymphatic diseases ,Eosinophilia ,medicine ,Humans ,Myeloproliferative neoplasm ,Cells, Cultured ,Chronic eosinophilic leukemia ,Sulfonamides ,Myeloproliferative Disorders ,Bcl-2-Like Protein 11 ,business.industry ,Granulomatosis with Polyangiitis ,Antibodies, Monoclonal ,General Medicine ,Eosinophil ,medicine.disease ,Bridged Bicyclo Compounds, Heterocyclic ,ddc ,Eosinophils ,medicine.anatomical_structure ,Pyrimidines ,Oncology ,Proto-Oncogene Proteins c-bcl-2 ,Case-Control Studies ,Immunology ,Bone marrow ,medicine.symptom ,business ,Original Article – Cancer Research - Abstract
PurposeHypereosinophilia represents a heterogenous group of severe medical conditions characterized by elevated numbers of eosinophil granulocytes in peripheral blood, bone marrow or tissue. Treatment options for hypereosinophilia remain limited despite recent approaches including IL-5-targeted monoclonal antibodies and tyrosine kinase inhibitors.MethodsTo understand aberrant survival patterns and options for pharmacologic intervention, we characterized BCL-2-regulated apoptosis signaling by testing for BCL-2 family expression levels as well as pharmacologic inhibition using primary patient samples from diverse subtypes of hypereosinophilia (hypereosinophilic syndromen = 18, chronic eosinophilic leukemia not otherwise specifiedn = 9, lymphocyte-variant hypereosinophilian = 2, myeloproliferative neoplasm with eosinophilian = 2, eosinophilic granulomatosis with polyangiitisn = 11, reactive eosinophilian = 3).ResultsContrary to published literature, we found no difference in the levels of the lncRNAMorrbidand its targetBIM. Yet, we identified a near complete loss of expression of pro-apoptoticPUMAas well as a reduction in anti-apoptoticBCL-2. Accordingly,BCL-2inhibition using venetoclax failed to achieve cell death induction in eosinophil granulocytes and bone marrow mononuclear cells from patients with hypereosinophilia. In contrast,MCL1inhibition using S63845 specifically decreased the viability of bone marrow progenitor cells in patients with hypereosinophilia. In patients diagnosed with Chronic Eosinophilic Leukemia (CEL-NOS) or Myeloid and Lymphatic Neoplasia with hypereosinophilia (MLN-Eo) repression of survival was specifically powerful.ConclusionOur study shows thatMCL1inhibition might be a promising therapeutic option for hypereosinophilia patients specifically for CEL-NOS and MLN-Eo.
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- 2021
16. Ab initio modeling and thermodynamics of hydrated plutonium oxalates
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Michael D. LaCount, David E. Meier, Andrew M. Ritzmann, Scott E. Muller, Richard A. Clark, Edgar C. Buck, and David G. Abrecht
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Nuclear and High Energy Physics ,Nuclear Energy and Engineering ,General Materials Science - Published
- 2023
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17. Grand challenges in nuclear materials new insights into nuclear materials using ion irradiation, CryoEM, and in-situ liquid cell microscopy
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Edgar C. Buck
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- 2022
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18. Timescale reverses the relationship between host density and infection risk
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Tara E. Stewart Merrill, Carla E. Cáceres, Samantha Gray, Veronika R. Laird, Zoe T. Schnitzler, and Julia C. Buck
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Daphnia ,General Immunology and Microbiology ,Reproduction ,Animals ,Parasites ,General Medicine ,General Agricultural and Biological Sciences ,Zooplankton ,General Biochemistry, Genetics and Molecular Biology ,Host-Parasite Interactions ,General Environmental Science - Abstract
Host density shapes infection risk through two opposing phenomena. First, when infective stages are subdivided among multiple hosts, greater host densities decrease infection risk through ‘safety in numbers’. Hosts, however, represent resources for parasites, and greater host availability also fuels parasite reproduction. Hence, host density increases infection risk through ‘density-dependent transmission’. Theory proposes that these phenomena are not disparate outcomes but occur over different timescales. That is, higher host densities may reduce short-term infection risk, but because they support parasite reproduction, may increase long-term risk. We tested this theory in a zooplankton-disease system with laboratory experiments and field observations. Supporting theory, we found that negative density–risk relationships (safety in numbers) sometimes emerged over short timescales, but these relationships reversed to ‘density-dependent transmission’ within two generations. By allowing parasite numerical responses to play out, time can shift the consequences of host density, from reduced immediate risk to amplified future risk.
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- 2022
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19. Improved FIFRELIN de-excitation model for neutrino applications
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H. Almazán, L. Bernard, A. Blanchet, A. Bonhomme, C. Buck, A. Chalil, A. Chebboubi, P. del Amo Sanchez, I. El Atmani, L. Labit, J. Lamblin, A. Letourneau, D. Lhuillier, M. Licciardi, M. Lindner, O. Litaize, T. Materna, H. Pessard, J.-S. Réal, J.-S. Ricol, C. Roca, R. Rogly, T. Salagnac, V. Savu, S. Schoppmann, T. Soldner, A. Stutz, L. Thulliez, M. Vialat, Laboratoire de Physique Subatomique et de Cosmologie (LPSC), Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes (UGA)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP ), Université Grenoble Alpes (UGA), Institut de Recherches sur les lois Fondamentales de l'Univers (IRFU), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay, CEA Cadarache, Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Laboratoire d'Annecy de Physique des Particules (LAPP), Institut National de Physique Nucléaire et de Physique des Particules du CNRS (IN2P3)-Université Savoie Mont Blanc (USMB [Université de Savoie] [Université de Chambéry])-Centre National de la Recherche Scientifique (CNRS), and Institut Laue-Langevin (ILL)
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electron ,Nuclear and High Energy Physics ,energy: high ,angular correlation ,scintillation counter: liquid ,FOS: Physical sciences ,anisotropy ,[PHYS.NEXP]Physics [physics]/Nuclear Experiment [nucl-ex] ,programming ,cascade ,High Energy Physics - Experiment ,High Energy Physics - Experiment (hep-ex) ,efficiency ,gamma ray ,[PHYS.HEXP]Physics [physics]/High Energy Physics - Experiment [hep-ex] ,STEREO ,X-ray: emission ,data management ,Nuclear Experiment (nucl-ex) ,n: capture ,numerical calculations: Monte Carlo ,Nuclear Experiment - Abstract
The precise modeling of the de-excitation of Gd isotopes is of great interest for experimental studies of neutrinos using Gd-loaded organic liquid scintillators. The FIFRELIN code was recently used within the purposes of the STEREO experiment for the modeling of the Gd de-excitation after neutron capture in order to achieve a good control of the detection efficiency. In this work, we report on the recent additions in the FIFRELIN de-excitation model with the purpose of enhancing further the de-excitation description. Experimental transition intensities from EGAF database are now included in the FIFRELIN cascades, in order to improve the description of the higher energy part of the spectrum. Furthermore, the angular correlations between {\gamma} rays are now implemented in FIFRELIN, to account for the relative anisotropies between them. In addition, conversion electrons are now treated more precisely in the whole spectrum range, while the subsequent emission of X rays is also accounted for. The impact of the aforementioned improvements in FIFRELIN is tested by simulating neutron captures in various positions inside the STEREO detector. A repository of up-to-date FIFRELIN simulations of the Gd isotopes is made available for the community, with the possibility of expanding for other isotopes which can be suitable for different applications., Comment: Corrected typos on author names on arXiv metadata
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- 2022
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20. Environmental Persistence of the World's Most Burdensome Infectious and Parasitic Diseases
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Skylar R. Hopkins, Isabel J. Jones, Julia C. Buck, Christopher LeBoa, Laura H. Kwong, Kim Jacobsen, Chloe Rickards, Andrea J. Lund, Nicole Nova, Andrew J. MacDonald, Miles Lambert-Peck, Giulio A. De Leo, and Susanne H. Sokolow
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human–environment interaction ,Public Health, Environmental and Occupational Health ,Water ,DALYs ,environmental control ,human health ,Global Health ,Communicable Diseases ,Vector-Borne Diseases ,Emerging Infectious Diseases ,Infectious Diseases ,Good Health and Well Being ,Clean Water and Sanitation ,Genetics ,Public Health and Health Services ,Parasitic Diseases ,2.2 Factors relating to the physical environment ,human-environment interaction ,Humans ,Aetiology ,Infection ,disease dynamics ,Ecosystem - Abstract
Humans live in complex socio-ecological systems where we interact with parasites and pathogens that spend time in abiotic and biotic environmental reservoirs (e.g., water, air, soil, other vertebrate hosts, vectors, intermediate hosts). Through a synthesis of published literature, we reviewed the life cycles and environmental persistence of 150 parasites and pathogens tracked by the World Health Organization's Global Burden of Disease study. We used those data to derive the time spent in each component of a pathogen's life cycle, including total time spent in humans versus all environmental stages. We found that nearly all infectious organisms were “environmentally mediated” to some degree, meaning that they spend time in reservoirs and can be transmitted from those reservoirs to human hosts. Correspondingly, many infectious diseases were primarily controlled through environmental interventions (e.g., vector control, water sanitation), whereas few (14%) were primarily controlled by integrated methods (i.e., combining medical and environmental interventions). Data on critical life history attributes for most of the 150 parasites and pathogens were difficult to find and often uncertain, potentially hampering efforts to predict disease dynamics and model interactions between life cycle time scales and infection control strategies. We hope that this synthetic review and associated database serve as a resource for understanding both common patterns among parasites and pathogens and important variability and uncertainty regarding particular infectious diseases. These insights can be used to improve systems-based approaches for controlling environmentally mediated diseases of humans in an era where the environment is rapidly changing.
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- 2022
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21. Monitoring the dead as an ecosystem indicator
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Thomas M. Newsome, Philip S. Barton, William J. Ripple, Emma E. Spencer, Julia C. Buck, Jennifer M. DeBruyn, and Brandon T. Barton
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0106 biological sciences ,0303 health sciences ,Ecosystem health ,Biomass (ecology) ,decomposition ,Ecology ,Hypotheses ,Biology ,010603 evolutionary biology ,01 natural sciences ,Food web ,indicators ,03 medical and health sciences ,Abundance (ecology) ,Ecosystem management ,Ecosystem ,Carrion ,Terrestrial ecosystem ,carrion ,Ecology, Evolution, Behavior and Systematics ,QH540-549.5 ,030304 developmental biology ,Nature and Landscape Conservation ,ecosystem health - Abstract
Dead animal biomass (carrion) is present in all terrestrial ecosystems, and its consumption, decomposition, and dispersal can have measurable effects on vertebrates, invertebrates, microbes, parasites, plants, and soil. But despite the number of studies examining the influence of carrion on food webs, there has been no attempt to identify how general ecological processes around carrion might be used as an ecosystem indicator. We suggest that knowledge of scavenging and decomposition rates, scavenger diversity, abundance, and behavior around carrion, along with assessments of vegetation, soil, microbe, and parasite presence, can be used individually or in combination to understand food web dynamics. Monitoring carrion could also assist comparisons of ecosystem processes among terrestrial landscapes and biomes. Although there is outstanding research needed to fully integrate carrion ecology and monitoring into ecosystem management, we see great potential in using carrion as an ecosystem indicator of an intact and functional food web., We argue that information about the processes and organisms involved with the consumption and decomposition of dead animal matter (carrion) can provide insights into the broader health and integrity of ecosystems.
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- 2021
22. Signaling-Biased and Constitutively Active Dopamine D2 Receptor Variant
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Timothy M. Dore, Naeem Asad, David C. Buck, Dineke S. Verbeek, Marina A. J. Tijssen, Kim A. Neve, John T. Williams, Alec F. Condon, Ujwal Shinde, Dayana Rodriguez-Contreras, Movement Disorder (MD), and Molecular Neuroscience and Ageing Research (MOLAR)
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Quinpirole ,Physiology ,G protein ,Cognitive Neuroscience ,Biochemistry ,Article ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Dopamine ,Dopamine receptor D2 ,Cyclic AMP ,medicine ,Arrestin ,Animals ,Humans ,Inverse agonist ,Receptor ,030304 developmental biology ,0303 health sciences ,Receptors, Dopamine D2 ,Chemistry ,Cell Biology ,General Medicine ,Cell biology ,HEK293 Cells ,Dopamine Agonists ,Sulpiride ,030217 neurology & neurosurgery ,Signal Transduction ,medicine.drug - Abstract
A dopamine D2 receptor mutation was recently identified in a family with a novel hyperkinetic movement disorder. Compared to the wild type D2 receptor, the novel allelic variant D2-I(212)F activates a Gα(i1)β(1)γ(2) heterotrimer with higher potency and modestly enhanced basal activity in human embryonic kidney (HEK) 293 cells, and has decreased capacity to recruit arrestin3. We now report that omitting overexpressed G protein-coupled receptor kinase-2 (GRK2) decreased the potency and efficacy of quinpirole for arrestin recruitment. The relative efficacy of quinpirole for arrestin recruitment to D2-I(212)F compared to D2-WT was considerably lower without overexpressed GRK2 than with added GRK2. D2-I(212)F exhibited higher basal activation of Gα(oA) than Gα(i1), but little or no increase in the potency of quinpirole relative to D2-WT. Other signs of D2-I(212)F constitutive activity for G protein-mediated signaling, in addition to basal activation of Gα(i/o), were enhanced basal inhibition of forskolin-stimulated cyclic AMP accumulation that was reversed by the inverse agonists sulpiride and spiperone and a ~4-fold increase in the apparent affinity of D2-I(212)F for quinpirole, determined from competition binding assays. In mouse midbrain slices, inhibition of tonic current by the inverse agonist sulpiride in dopamine neurons expressing D2-I(212)F was consistent with our hypothesis of enhanced constitutive activity and sensitivity to dopamine relative to D2-WT. Molecular dynamics simulations with D2 receptor models suggested that an ionic lock between the cytoplasmic ends of the third and sixth α-helices that constrains many G protein-coupled receptors in an inactive conformation spontaneously breaks in D2-I(212)F. Overall, these results confirm that D2-I(212)F is a constitutively active and signaling-biased D2 receptor mutant, and also suggest that the effect of the likely pathogenic variant in a given brain region will depend on the nature of G protein and GRK expression.
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- 2021
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23. Solubility controls on plutonium and americium release in subsurface environments exposed to acidic processing wastes
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Hilary P. Emerson, Sergey I. Sinkov, Carolyn I. Pearce, Kirk J. Cantrell, Calvin H. Delegard, Michelle M.V. Snyder, May-Lin Thomas, Dallas D. Reilly, Edgar C. Buck, Lucas E. Sweet, Amanda J. Casella, Jennifer C. Carter, Jordan F. Corbey, Ian J. Schwerdt, Richard Clark, Forrest D. Heller, David Meier, Mavrik Zavarin, Annie B. Kersting, and Vicky L. Freedman
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Geochemistry and Petrology ,Environmental Chemistry ,Pollution - Published
- 2023
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24. Changes to spotted turtle (Clemmys guttata) habitat selection in response to a salt marsh restoration
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Karen C. Beattie, Danielle I. O’Dell, Jennifer M. Karberg, Elizabeth C. Buck, and Kelly A. Omand
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0106 biological sciences ,Marsh ,010504 meteorology & atmospheric sciences ,Population ,Clemmys guttata ,Wetland ,Management, Monitoring, Policy and Law ,Aquatic Science ,01 natural sciences ,Swamp ,law.invention ,law ,Turtle (robot) ,education ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences ,geography ,education.field_of_study ,geography.geographical_feature_category ,biology ,Ecology ,010604 marine biology & hydrobiology ,biology.organism_classification ,Habitat ,Salt marsh ,Environmental science - Abstract
Development of coastal New England has led to the replacement of up to 37% of salt marshes with degraded freshwater wetlands, primarily through tidal restrictions. Removing these restrictions to restore salt marsh ecology would improve water quality, increase flood and storm protection, nutrient filtration, erosion control, and carbon sequestration. However, such restorations replace functional freshwater wetlands and could potentially impact freshwater species. Freshwater-dependent wildlife species such as the spotted turtle (Clemmys guttata), may be especially vulnerable to rapid changes in habitat resulting from tidal reintroduction due to their high site fidelity and limited ability to disperse quickly. Conservation of genetically and physically isolated spotted turtle populations as well as the restoration of salt marshes to mitigate climate change impacts are both high priorities on Nantucket Island. These two priorities conflicted in a project to restore tidal hydrology to an impounded freshwater marsh known to host a robust spotted turtle population. We evaluated changes to spotted turtle home range size and location and habitat use in response to salt marsh restoration over eight years. Home range size did not change but the location of home ranges shifted into bordering wetlands landward of the tidal salt water influence. Spotted turtles selected remaining freshwater marshes and shrub swamps while avoiding developed land and areas of establishing salt marsh within areas that had previously been high quality habitat. This study suggests prioritizing conservation of wetlands adjacent to planned salt marsh restoration to provide habitat for freshwater species to migrate.
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- 2021
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25. Targeting Extracellular Vesicle Secretion in Combination with Venetoclax Synergistically Induces Apoptosis in FLT3-ITD+ AML
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Judith S. Hecker, Jennifer Rivière, Mark van der Garde, Michèle C. Buck, Rupert Öllinger, Florian Bassermann, Bernd Giebel, Robert A.J. Oostendorp, Roland Rad, and Katharina S. Goetze
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Immunology ,Cell Biology ,Hematology ,Biochemistry - Published
- 2022
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26. Single Cell Transcriptomic Analysis of the Bone Marrow Microenvironment Uncovers a Role for Antigen Presentation Processes in MDS/AML Relapse after Allogeneic Hematopoietic Stem Cell Transplantation
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Jennifer Rivière, Mark van der Garde, Judith S. Hecker, Michèle C. Buck, Florian Bassermann, Mareike Verbeek, and Katharina S. Goetze
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Immunology ,Cell Biology ,Hematology ,Biochemistry - Published
- 2022
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27. Compartment-specific mutational landscape of clonal hematopoiesis
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Luise Hartmann, Judith S. Hecker, Maja Rothenberg-Thurley, Jennifer Rivière, Madlen Jentzsch, Bianka Ksienzyk, Michèle C. Buck, Mark van der Garde, Luise Fischer, Susann Winter, Martina Rauner, Elena Tsourdi, Heike Weidner, Katja Sockel, Marie Schneider, Anne S. Kubasch, Martin Nolde, Dominikus Hausmann, Jörg Lützner, Szymon Goralski, Florian Bassermann, Karsten Spiekermann, Lorenz C. Hofbauer, Sebastian Schwind, Uwe Platzbecker, Katharina S. Götze, and Klaus H. Metzeler
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Cancer Research ,Myeloproliferative Disorders ,Oncology ,Mutation ,Humans ,Hematology ,Clonal Hematopoiesis ,Hematopoiesis ,Clone Cells - Abstract
Clonal hematopoiesis (CH) is characterized by somatic mutations in blood cells of individuals without hematologic disease. While the mutational landscape of CH in peripheral blood (PB) has been well characterized, detailed analyses addressing its spatial and cellular distribution in the bone marrow (BM) compartment are sparse. We studied CH driver mutations in healthy individuals (n = 261) across different anatomical and cellular compartments. Variant allele frequencies were higher in BM than PB and positively correlated with the number of driver variants, yet remained stable during a median of 12 months of follow-up. In CH carriers undergoing simultaneous bilateral hip replacement, we detected ASXL1-mutant clones in one anatomical location but not the contralateral side, indicating intra-patient spatial heterogeneity. Analyses of lineage involvement in ASXL1-mutated CH showed enriched clonality in BM stem and myeloid progenitor cells, while lymphocytes were particularly involved in individuals carrying the c.1934dupG variant, indicating different ASXL1 mutations may have distinct lineage distribution patterns. Patients with overt myeloid malignancies showed higher mutation numbers and allele frequencies and a shifting mutation landscape, notably characterized by increasing prevalence of DNMT3A codon R882 variants. Collectively, our data provide novel insights into the genetics, evolution, and spatial and lineage-specific BM involvement of CH.
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- 2022
28. A microfluidic electrochemical cell for studying the corrosion of uranium dioxide (UO
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Jennifer, Yao, Nabajit, Lahiri, Shalini, Tripathi, Shawn L, Riechers, Eugene S, Ilton, Sayandev, Chatterjee, and Edgar C, Buck
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We have developed a specialized microfluidic electrochemical cell that enables
- Published
- 2022
29. Making electrodes by particle stamping for microscopic and electrochemical analysis
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Edgar C. Buck, Jiyoung Son, Xiao-Ying Yu, and Shawn L. Riechers
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Materials science ,Electrode ,Particle ,Stamping ,Composite material ,Electrochemistry ,Instrumentation - Published
- 2021
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30. How to identify win–win interventions that benefit human health and conservation
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Isabel J. Jones, Christopher LeBoa, Julia C. Buck, Andrew J. MacDonald, Skylar R. Hopkins, Nicole Nova, Kevin D. Lafferty, Chelsea L. Wood, Laura H. Kwong, Giulio A. De Leo, Alison J. Peel, Sarah H. Olson, Susanne H. Sokolow, and Andrea J. Lund
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Sustainable development ,Global and Planetary Change ,Ecology ,Public economics ,Renewable Energy, Sustainability and the Environment ,Geography, Planning and Development ,Perspective (graphical) ,Psychological intervention ,Management, Monitoring, Policy and Law ,Affect (psychology) ,Dual (category theory) ,Urban Studies ,Win-win game ,Human health ,Nature and Landscape Conservation ,Food Science - Abstract
To reach the Sustainable Development Goals, we may need to act on synergies between some targets while mediating trade-offs between other targets. But what, exactly, are synergies and trade-offs, and how are they related to other outcomes, such as ‘win–win’ solutions? Finding limited guidance in the existing literature, we developed an operational method for distinguishing win–wins from eight other possible dual outcomes (lose–lose, lose–neutral and so on). Using examples related to human health and conservation, we illustrate how interdisciplinary problem-solvers can use this framework to assess relationships among targets and compare multi-target interventions that affect people and nature. Reaching the Sustainable Development Goals requires recognizing trade-offs and synergies among targets. Focusing on conservation and human health, this Perspective suggests how to productively distinguish win–wins from other outcomes.
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- 2020
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31. Silk fibroin as an additive for cell-free protein synthesis
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Daniel A. Phillips, Chia-Suei Hung, Marilyn S. Lee, Maneesh K. Gupta, Matthew W. Lux, and Chelsea C. Buck
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0106 biological sciences ,CFPS, Cell-free Protein Synthesis ,lcsh:Biotechnology ,Biomedical Engineering ,Silk fibroin ,Fibroin ,macromolecular substances ,Protein aggregation ,01 natural sciences ,Applied Microbiology and Biotechnology ,Article ,03 medical and health sciences ,Structural Biology ,Bombyx mori ,lcsh:TP248.13-248.65 ,010608 biotechnology ,Genetics ,HRP, horse radish peroxidase ,SF, Silk Fibroin ,SEM, Scanning Electron Microscopy ,lcsh:QH301-705.5 ,CFPS ,030304 developmental biology ,0303 health sciences ,Cell-free protein synthesis ,biology ,Chemistry ,fungi ,technology, industry, and agriculture ,biology.organism_classification ,Biocompatible material ,Preservation ,SILK ,lcsh:Biology (General) ,Self-healing hydrogels ,Biophysics ,Cell-free systems ,sfGFP, superfolder green fluorescent protein ,Macromolecular crowding - Abstract
Cell-free systems contain many proteins and metabolites required for complex functions such as transcription and translation or multi-step metabolic conversions. Research into expanding the delivery of these systems by drying or by embedding into other materials is enabling new applications in sensing, point-of-need manufacturing, and responsive materials. Meanwhile, silk fibroin from the silk worm, Bombyx mori, has received attention as a protective additive for dried enzyme formulations and as a material to build biocompatible hydrogels for controlled localization or delivery of biomolecular cargoes. In this work, we explore the effects of silk fibroin as an additive in cell-free protein synthesis (CFPS) reactions. Impacts of silk fibroin on CFPS activity and stability after drying, as well as the potential for incorporation of CFPS into hydrogels of crosslinked silk fibroin are assessed. We find that simple addition of silk fibroin increased productivity of the CFPS reactions by up to 42%, which we attribute to macromolecular crowding effects. However, we did not find evidence that silk fibroin provides a protective effects after drying as previously described for purified enzymes. Further, the enzymatic crosslinking transformations of silk fibroin typically used to form hydrogels are inhibited in the presence of the CFPS reaction mixture. Crosslinking attempts did not impact CFPS activity, but did yield localized protein aggregates rather than a hydrogel. We discuss the mechanisms at play in these results and how the silk fibroin-CFPS system might be improved for the design of cell-free devices.
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- 2020
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32. An Atomic-Scale Understanding of UO2 Surface Evolution during Anoxic Dissolution
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Steven R. Spurgeon, Beng Thye Tan, Bethany E. Matthews, Thomas Gouder, Ian Farnan, Rachel Eloirdi, Edgar C. Buck, Aleksej J. Popel, Matthew J. Olszta, Popel, Aleksej J [0000-0003-4436-9961], Spurgeon, Steven R [0000-0003-1218-839X], and Apollo - University of Cambridge Repository
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Surface (mathematics) ,Materials science ,surface oxidation ,Passivation ,Uranium dioxide ,sub-03 ,UO2 ,Atomic units ,Anoxic waters ,Characterization (materials science) ,anoxic dissolution ,chemistry.chemical_compound ,chemistry ,Chemical engineering ,TEM ,General Materials Science ,passivation ,Surface oxidation ,secondary phases ,Dissolution - Abstract
Our present understanding of surface dissolution of nuclear fuels such as uranium dioxide (UO2) is limited by the use of non-local characterization techniques. Here we discuss the use of state-of-the-art scanning transmission electron microscopy (STEM) to reveal atomic–scale changes occurring to a UO2 thin film subjected to anoxic dissolution in deionised water. No amorphisation of the UO2 film surface during dissolution is observed, and dissolution occurs preferentially at surface reactive sites that present as surface pits which increase in size as the dissolution proceeds. Using a combination of STEM imaging modes, energy-dispersive X-ray spectroscopy (STEM-EDS), and electron energy loss spectroscopy (STEM-EELS), we investigate structural defects and oxygen passivation of the surface that originates from the filling of the octahedral interstitial site in the centre of the unit cells and its associated lattice contraction. Taken together, our results reveal complex pathways for both the dissolution and infiltration of solutions into UO2 surfaces.
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- 2020
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33. Spontaneous redox continuum reveals sequestered technetium clusters and retarded mineral transformation of iron
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Gabriel B. Hall, Edgar C. Buck, Daria Boglaienko, Tatiana G. Levitskaia, Yelena Katsenovich, Vanessa E. Holfeltz, Jennifer A. Soltis, Carlo U. Segre, Lucas E. Sweet, Yingge Du, Ravi K. Kukkadapu, and Hilary P. Emerson
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Pertechnetate ,Inorganic chemistry ,Iron oxide ,chemistry.chemical_element ,02 engineering and technology ,010501 environmental sciences ,Technetium ,01 natural sciences ,Biochemistry ,Redox ,Metal ,lcsh:Chemistry ,Ferrihydrite ,chemistry.chemical_compound ,Materials Chemistry ,Environmental Chemistry ,0105 earth and related environmental sciences ,Magnetite ,Zerovalent iron ,General Chemistry ,021001 nanoscience & nanotechnology ,chemistry ,lcsh:QD1-999 ,visual_art ,visual_art.visual_art_medium ,0210 nano-technology - Abstract
The sequestration of metal ions into the crystal structure of minerals is common in nature. To date, the incorporation of technetium(IV) into iron minerals has been studied predominantly for systems under carefully controlled anaerobic conditions. Mechanisms of the transformation of iron phases leading to incorporation of technetium(IV) under aerobic conditions remain poorly understood. Here we investigate granular metallic iron for reductive sequestration of technetium(VII) at elevated concentrations under ambient conditions. We report the retarded transformation of ferrihydrite to magnetite in the presence of technetium. We observe that quantitative reduction of pertechnetate with a fraction of technetium(IV) structurally incorporated into non-stoichiometric magnetite benefits from concomitant zero valent iron oxidative transformation. An in-depth profile of iron oxide reveals clusters of the incorporated technetium(IV), which account for 32% of the total retained technetium estimated via X-ray absorption and X-ray photoelectron spectroscopies. This corresponds to 1.86 wt.% technetium in magnetite, providing the experimental evidence to theoretical postulations on thermodynamically stable technetium(IV) being incorporated into magnetite under spontaneous aerobic redox conditions. For the geological disposal of radionuclides through immobilization within minerals, naturally aerobic conditions need to be considered. Here the authors report a quantitative reduction of Tc7+ and partial structural incorporation of Tc4+ into in situ formed nonstochiometric magnetite under ambient conditions.
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- 2020
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34. Leukocytoclastic vasculitis as a rare dermatologic manifestation of Crohn’s disease mimicking cellulitis: a case report
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Samarth Dawan, Tamara Milovanovic, Ann Hudson, Andrew R Virata, Wendy R. McDermott, Meredith C. Buck, Terri Nordin, Scott A. Martin, Igor Dumic, and Charles W. Nordstrom
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Crohn’s disease ,medicine.medical_specialty ,Dermatologic manifestation ,Case Report ,Levofloxacin ,Inflammatory bowel disease ,03 medical and health sciences ,0302 clinical medicine ,Crohn Disease ,Ustekinumab ,Humans ,Medicine ,030212 general & internal medicine ,lcsh:RC799-869 ,Aged ,Erythema nodosum ,Crohn's disease ,medicine.diagnostic_test ,business.industry ,Gastroenterology ,Cellulitis ,General Medicine ,Leukocytoclastic vasculitis ,medicine.disease ,Dermatology ,Rash ,Skin biopsy ,Vasculitis, Leukocytoclastic, Cutaneous ,Female ,030211 gastroenterology & hepatology ,lcsh:Diseases of the digestive system. Gastroenterology ,medicine.symptom ,business ,Vasculitis ,Pyoderma gangrenosum ,medicine.drug - Abstract
Background Leukocytoclastic vasculitis (LCV) is an immune-complex mediated vasculitis characterized by neutrophilic inflammation and nuclear debris in post capillary venules. LCV is a rare dermatologic manifestation of Crohn’s disease (CD) and may occur with the onset of the disease or any time after the diagnosis including the period of exacerbation. Case presentation We present a 70 year old woman with history of psoriasis and treatment refractory CD requiring monoclonal antibody therapy with ustekinumab. One month prior to the current admission, she developed abdominal pain, worsening diarrhea and was diagnosed with CD exacerbation for which she was given ustekinumab. While her abdominal symptoms mildly improved with ustekinumab, she developed new bilateral lower extremity rash initially treated with levofloxacin for presumed cellulitis. The rash consisted of mild erythematous, non-scaling patches with scattered non-palpable petechiae on the lower extremities with subsequent involvement of abdomen, lower back and buttocks. Abdominal exam showed diffuse tenderness without mass, guarding or rebound while reminder of physical exam was unremarkable. Following the failure of antimicrobial therapy, she was diagnosed with LCV by skin biopsy. Complete work up was negative for infectious, malignant and inflammatory etiologies of LCV. Patient improved with increased dose of budesonide and subsequently continued to tolerate ustekinumab without recurrence of LCV. Discussion and conclusion LCV is a rare form of vasculitis and one of the rarest dermatologic manifestations of CD, appearing at any stage of the disease. LCV has been associated with autoimmune diseases, infections, specific drugs (levofloxacin, ustekinumab), and malignancy. Clinical presentation of LCV is variable and frequently mistaken for cellulitis. LCV should be considered in differential diagnosis of bilateral lower extremity rash in patients with CD after infectious, malignant and auto-immune/inflammatory etiologies are excluded. Unlike erythema nodosum (EN) and pyoderma gangrenosum (PG), LCV requires biopsy for diagnosis. Most patients respond well to steroids without scarring.
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- 2020
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35. Conservation implications of disease control
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Georgia Titcomb, Sara B. Weinstein, Julia C. Buck, and Hillary S. Young
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medicine.medical_specialty ,Geography ,Ecology ,medicine ,Intensive care medicine ,Disease control ,Ecology, Evolution, Behavior and Systematics - Published
- 2020
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36. In situ liquid SIMS analysis of uranium oxide
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Edgar C. Buck, Xiao-Ying Yu, Jennifer Yao, and Zihua Zhu
- Subjects
In situ ,Detection limit ,Materials science ,Radiochemistry ,chemistry.chemical_element ,Surfaces and Interfaces ,General Chemistry ,Nuclear material ,Uranium ,Condensed Matter Physics ,Surfaces, Coatings and Films ,Secondary ion mass spectrometry ,chemistry.chemical_compound ,chemistry ,Materials Chemistry ,Uranium oxide - Published
- 2020
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37. Effects of invasive larval bullfrogs (Rana catesbeiana) on disease transmission, growth and survival in the larvae of native amphibians
- Author
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Carmen Harjoe, Trang D. Dang, Jenny Urbina, Ricky D. Cothran, Andrew R. Blaustein, Julia C. Buck, Randall J. Bendis, Brian M. Mattes, Devin K. Jones, Rick A. Relyea, and Stephanie S. Gervasi
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0106 biological sciences ,Amphibian ,0303 health sciences ,education.field_of_study ,Larva ,Disease reservoir ,Ecology ,media_common.quotation_subject ,Population ,Zoology ,Biology ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,Bullfrog ,biology.animal ,sense organs ,Chytridiomycosis ,Metamorphosis ,education ,Ecology, Evolution, Behavior and Systematics ,Overwintering ,030304 developmental biology ,media_common - Abstract
The mechanisms by which invasive species negatively affect native species include competition, predation, and the introduction of novel pathogens. Moreover, if an invasive species is a competent disease reservoir, it may facilitate the long-term maintenance and spread of pathogens in ecological assemblages and drive the extinction of less tolerant or less resistant species. Disease-driven loss of biodiversity is exemplified by the amphibian–chytrid fungus system. The disease chytridiomycosis is caused by the aquatic chytrid fungus Batrachochytrium dendrobatidis (Bd) in anurans and is associated with worldwide amphibian population declines and extinctions. For amphibian species that metamorphose and leave infected aquatic habitats, the mechanisms by which Bd persists over winter in these habitats remains a critical open question. A leading hypothesis is that American bullfrogs (Rana catesbeiana), a worldwide invasive species, are tolerant to Bd and serve as a reservoir host for Bd during winter months and subsequently infect native species that return to breed in spring. Using outdoor mesocosms, we experimentally examined if two strains of Bd could overwinter in aquatic systems, in the presence or absence of bullfrog tadpoles, and if overwintered Bd could be transmitted to tadpoles of two spring-breeding species: Pacific treefrogs (Pseudacris regilla) and Cascades frogs (Rana cascadae). We found that only 4 of 448 total animals (one bullfrog and three spring breeders) tested positive for Bd after overwintering. Moreover, two of the three infected spring breeders emerged from tanks that contained overwintered Bd but in the absence of infected bullfrogs. This suggests that Bd can persist over winter without bullfrogs as a reservoir host. We found no effect of Bd strain on bullfrog survival after overwintering. For Pacific treefrogs, Bd exposure did not significantly affect mass at or time to metamorphosis while exposure to bullfrogs reduced survival. For Cascades frogs, we found an interactive effect of Bd strain and bullfrog presence on time to metamorphosis, but no main or interactive effects on their survival or mass at metamorphosis. In short, bullfrog tadpoles rarely retained and transmitted Bd infection in our experiment and we found limited evidence that Bd successfully overwinters in the absence of bullfrog tadpoles and infects spring-breeding amphibians.
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- 2020
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38. A new non-diffusional gas bubble production route in used nuclear fuel: implications for fission gas release, cladding corrosion, and next generation fuel design
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Richard A.F. Clark, Timothy G. Lach, Bruce K. McNamara, Sean H. Kessler, Jon M. Schwantes, Camille Palmer, Ram Devanathan, Jason M. Lonergan, Jacob Bair, and Edgar C. Buck
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Cladding (metalworking) ,Materials science ,Physics::Instrumentation and Detectors ,Fission ,Bubble ,General Physics and Astronomy ,02 engineering and technology ,engineering.material ,021001 nanoscience & nanotechnology ,010403 inorganic & nuclear chemistry ,01 natural sciences ,Spent nuclear fuel ,0104 chemical sciences ,Corrosion ,Recoil ,engineering ,Noble metal ,Physical and Theoretical Chemistry ,Composite material ,0210 nano-technology ,Radioactive decay - Abstract
A novel relationship between noble metal phase particles and fission gas bubble production in used nuclear fuel is described. The majority of Te atoms within noble metal phase undergo radioactive decay to form stable Xe within a few hours after particle formation. This results in the production of clusters of Xe atoms contained within the solid metal matrix exhibiting an equivalent gas bubble pressure approaching 1 GPa. These high pressure bubbles are stabilized by the UO2 within the bulk of the fuel. However, when these bubbles form near the fuel/cladding interface, in combination with local and temporal damage caused by fission recoil, they are capable of overcoming the fracture strength of the UO2 and rupturing catastrophically. The force of the resulting bubble rupture is sufficient to eject noble metal phase particles several microns into the cladding. This proposed mechanism explains the observance of noble metal phase in cladding and is consistent with a host of morphological features found near the fuel/cladding interface.
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- 2020
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39. Direct measurement of the ionization quenching factor of nuclear recoils in germanium in the keV energy range
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A. Bonhomme, H. Bonet, C. Buck, J. Hakenmüller, G. Heusser, T. Hugle, M. Lindner, W. Maneschg, R. Nolte, T. Rink, E. Pirovano, and H. Strecker
- Subjects
High Energy Physics - Experiment (hep-ex) ,Physics - Instrumentation and Detectors ,Physics and Astronomy (miscellaneous) ,Physics::Instrumentation and Detectors ,FOS: Physical sciences ,High Energy Physics::Experiment ,Instrumentation and Detectors (physics.ins-det) ,Nuclear Experiment (nucl-ex) ,Nuclear Experiment ,Engineering (miscellaneous) ,High Energy Physics - Experiment - Abstract
This article reports the measurement of the ionization quenching factor in germanium for nuclear recoil energies in the keV range. Precise knowledge of this factor in this energy range is highly relevant for coherent elastic neutrino-nucleus scattering and low mass dark matter searches with germanium-based detectors. Nuclear recoils were produced in a thin high-purity germanium target with a very low energy threshold via irradiation using monoenergetic neutron beams. The energy dependence of the ionization quenching factor was directly measured via kinematically constrained coincidences with surrounding liquid scintillator based neutron detectors. The systematic uncertainties of the measurements are discussed in detail. With measured quenching factors between 0.16 and 0.23 in the 0.4 keV$$_{nr}$$ nr to 6.3 keV$$_{nr}$$ nr energy range, the data are compatible with the Lindhard theory with a parameter k of 0.162 $$\pm \,0.004$$ ± 0.004 (stat + sys).
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- 2022
40. Safe liquid scintillators for large scale detectors
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A. Bonhomme, C. Buck, B. Gramlich, and M. Raab
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Physics - Instrumentation and Detectors ,Physics::Instrumentation and Detectors ,FOS: Physical sciences ,Instrumentation and Detectors (physics.ins-det) ,Instrumentation ,Mathematical Physics - Abstract
Many experiments in particle physics, in particular in the field of neutrino searches, rely on organic liquid scintillators as target and detection material. The size of these detectors was continously growing in the last decades, up to the kiloton scale. In several cases these detectors are located at sites with enhanced safety requirements as underground laboratories or in the vicinity of nuclear reactors. Therefore, there is strong demand in liquids which are safe with respect to aspects as fire protection, human health or environmental pollution. In particular, properties as the flash point, the vapor pressure or the toxicity need to be significantly improved as compared to classical solvents such as xylene or pseudocumene. We present and compare the performance and optical properties of scintillators based on high flash point solvents. In particular polysiloxane based scintillators are characterized by outstanding properties in terms of safety., Comment: 13 pages, 4 figures
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- 2022
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41. Studying Corrosion Using Miniaturized Particle Attached Working Electrodes and the Nafion Membrane
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Jiyoung Son, Lyndi E. Strange, Xiao-Ying Yu, Shalini Tripathi, Shawn L. Riechers, Edgar C. Buck, and Mark H. Engelhard
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Working electrode ,Materials science ,Nanoparticle ,Article ,Nafion membrane ,System for Analysis at the Liquid-Vacuum Interface (SALVI) ,Electrochemical cell ,chemistry.chemical_compound ,CeO2 ,microfluidic electrochemical cell ,Nafion ,electrochemical analysis ,particle attached electrode ,TJ1-1570 ,Mechanical engineering and machinery ,Electrical and Electronic Engineering ,working electrode ,Spin coating ,Mechanical Engineering ,nanoparticle ,Secondary ion mass spectrometry ,Chemical engineering ,chemistry ,Control and Systems Engineering ,Electrode ,Particle - Abstract
We developed a new approach to attach particles onto a conductive layer as a working electrode (WE) in a microfluidic electrochemical cell with three electrodes. Nafion, an efficient proton transfer molecule, is used to form a thin protection layer to secure particle electrodes. Spin coating is used to develop a thin and even layer of Nafion membrane. The effects of Nafion (5 wt% 20 wt%) and spinning rates were evaluated using multiple sets of replicates. The electrochemical performance of various devices was demonstrated. Additionally, the electrochemical performance of the devices is used to select and optimize fabrication conditions. The results show that a higher spinning rate and a lower Nafion concentration (5 wt%) induce a better performance, using cerium oxide (CeO2) particles as a testing model. The WE surfaces were characterized using atomic force microscopy (AFM), scanning electron microscopy-focused ion beam (SEM-FIB), time-of-flight secondary ion mass spectrometry (ToF-SIMS), and X-ray photoelectron spectroscopy (XPS). The comparison between the pristine and corroded WE surfaces shows that Nafion is redistributed after potential is applied. Our results verify that Nafion membrane offers a reliable means to secure particles onto electrodes. Furthermore, the electrochemical performance is reliable and reproducible. Thus, this approach provides a new way to study more complex and challenging particles, such as uranium oxide, in the future.
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- 2021
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42. COVID-19-Induced Guillain-Barré Syndrome
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Reid A. Walters, Joseph E. Brooks, Justin C. Buck, and Felicia M. Mix
- Subjects
Pediatrics ,medicine.medical_specialty ,Physical Medicine & Rehabilitation ,Guillain-Barre syndrome ,Coronavirus disease 2019 (COVID-19) ,business.industry ,covid 19 ,General Engineering ,electromyography and electro-stimulation ,medicine.disease ,guillain-barre syndrome (gbs) ,covid induced guillian barre syndrome ,electrodiagnostic study ,Medicine ,business - Abstract
This case report involves a 47-year-old male who presented to the emergency department (ED) with a positive coronavirus disease 2019 (COVID-19) test and symptoms of Guillain-Barré syndrome (GBS). Electrodiagnostic (EDX) studies reported an acute inflammatory demyelinating polyradiculoneuropathy (AIDP). The patient underwent intravenous immune globulin (IVIG) treatment and four weeks of acute inpatient rehabilitation with some functional improvement but remained unable to ambulate independently at discharge.
- Published
- 2021
43. Editorial: Ecology and Evolution of Non-Consumptive Effects in Host-Parasite Interactions
- Author
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Janet Koprivnikar, Sara B. Weinstein, Julia C. Buck, and Lien T. Luong
- Subjects
avoidance ,Ecology ,Evolution ,Host (biology) ,Biology ,infection ,non-consumptive effect ,parasite ,QH359-425 ,Parasite hosting ,Evolutionary ecology ,natural enemy ,QH540-549.5 ,Ecology, Evolution, Behavior and Systematics ,risk - Published
- 2021
- Full Text
- View/download PDF
44. Ecological and socioeconomic factors associated with the human burden of environmentally mediated pathogens: a global analysis
- Author
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Susanne H Sokolow, Nicole Nova, Isabel J Jones, Chelsea L Wood, Kevin D Lafferty, Andres Garchitorena, Skylar R Hopkins, Andrea J Lund, Andrew J MacDonald, Christopher LeBoa, Alison J Peel, Erin A Mordecai, Meghan E Howard, Julia C Buck, David Lopez-Carr, Michele Barry, Matthew H Bonds, Giulio A De Leo, Stanford Woods Institute for the Environment, Stanford University, Department of Biology, Stanford University, Stanford, CA, USA, Hopkins Marine Station [Stanford], School of Aquatic and Fishery Sciences (University of Washington), University of California [Santa Barbara] (UC Santa Barbara), University of California (UC), Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle (MIVEGEC), Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Université de Montpellier (UM), North Carolina State University [Raleigh] (NC State), University of North Carolina System (UNC), Emmett Interdisciplinary Program in Environment and Resources, Department of Biology [Stanford], Centre for planetary Health and Food Security, Griffith University, University of North Carolina [Wilmington] (UNC), Department of Global Health and Social Medicine [Boston, MA,USA], and Harvard Medical School [Boston] (HMS)
- Subjects
Health (social science) ,Socioeconomic Factors ,Health Policy ,Public Health, Environmental and Occupational Health ,Medicine (miscellaneous) ,Humans ,COVID-19 ,Global Health ,Communicable Diseases ,United States ,[SHS]Humanities and Social Sciences ,Global Burden of Disease - Abstract
Billions of people living in poverty are at risk of environmentally mediated infectious diseases-that is, pathogens with environmental reservoirs that affect disease persistence and control and where environmental control of pathogens can reduce human risk. The complex ecology of these diseases creates a global health problem not easily solved with medical treatment alone.We quantified the current global disease burden caused by environmentally mediated infectious diseases and used a structural equation model to explore environmental and socioeconomic factors associated with the human burden of environmentally mediated pathogens across all countries.We found that around 80% (455 of 560) of WHO-tracked pathogen species known to infect humans are environmentally mediated, causing about 40% (129 488 of 359 341 disability-adjusted life years) of contemporary infectious disease burden (global loss of 130 million years of healthy life annually). The majority of this environmentally mediated disease burden occurs in tropical countries, and the poorest countries carry the highest burdens across all latitudes. We found weak associations between disease burden and biodiversity or agricultural land use at the global scale. In contrast, the proportion of people with rural poor livelihoods in a country was a strong proximate indicator of environmentally mediated infectious disease burden. Political stability and wealth were associated with improved sanitation, better health care, and lower proportions of rural poverty, indirectly resulting in lower burdens of environmentally mediated infections. Rarely, environmentally mediated pathogens can evolve into global pandemics (eg, HIV, COVID-19) affecting even the wealthiest communities.The high and uneven burden of environmentally mediated infections highlights the need for innovative social and ecological interventions to complement biomedical advances in the pursuit of global health and sustainability goals.Billamp; Melinda Gates Foundation, National Institutes of Health, National Science Foundation, Alfred P. Sloan Foundation, National Institute for Mathematical and Biological Synthesis, Stanford University, and the US Defense Advanced Research Projects Agency.
- Published
- 2021
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45. Exploring the Model Space of Airborne Electromagnetic Data to Delineate Large‐Scale Structure and Heterogeneity Within an Aquifer System
- Author
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Graham E. Fogg, Rosemary Knight, T. Greene, Seogi Kang, and C. Buck
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airborne electromagnetics ,geography ,geography.geographical_feature_category ,Environmental Engineering ,uncertainty quantification ,Sediment ,Sampling (statistics) ,Aquifer ,Inversion (meteorology) ,Hydrograph ,Soil science ,Space (mathematics) ,Civil Engineering ,Physical Geography and Environmental Geoscience ,Butte ,inversion ,Uncertainty quantification ,Geology ,Water Science and Technology ,vertical connectivity - Abstract
Author(s): Kang, S; Knight, R; Greene, T; Buck, C; Fogg, G | Abstract: Airborne electromagnetic (AEM) data can be inverted to recover models of the electrical resistivity of the subsurface; these, in turn, can be transformed to obtain models of sediment type. AEM data were acquired in Butte and Glenn Counties, California, USA to improve the understanding of the aquifer system. Around 800 line-kilometers of high-quality data were acquired, imaging to a depth of ∼300nm. We developed a workflow designed to obtain, from the AEM data, information about the large-scale structure and heterogeneity of the aquifer system to better understand the vertical connectivity. Using six different inversions incorporating various forms of available information and posterior sampling of the recovered resistivity models, we produced 6,006 resistivity models. These models were transformed to models of sediment type and estimates of percentage of sand/gravel. Exploring the model space, containing the resistivity models and the derived models, allowed us to delineate the large-scale structure of the aquifer system in a way that captures and communicates the uncertainty in the identified sediment type. The uncertainty increased, as expected, with depth, but also served to indicate, as areas of high uncertainty in sediment type, the location of both large-scale and small-scale interfaces between sediment types. A plan view map of the integrated percentage of sand/gravel, when compared to existing hydrographs, revealed the extent of lateral changes in vertical connectivity within the aquifer system throughout the study area.
- Published
- 2021
46. Formation and growth of cerium (III) oxalate nanocrystals by liquid-cell transmission electron microscopy
- Author
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Lili Liu, Karen Kruska, Gabriel B. Hall, Richard A. Clark, David E. Meier, and Edgar C. Buck
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History ,Polymers and Plastics ,Mechanics of Materials ,Mechanical Engineering ,Metals and Alloys ,General Materials Science ,Business and International Management ,Condensed Matter Physics ,Industrial and Manufacturing Engineering - Published
- 2022
- Full Text
- View/download PDF
47. Fiscal Year 2021 Filtration of Hanford Tank 241-AP-107 Supernatant Samples Obtained at Prototypic Tank Level and Filtered at 16 °C
- Author
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Jarrod R. Allred, John Gh Geeting, Reid A. Peterson, Edgar C. Buck, and Amy Westesen
- Subjects
Fiscal year ,Chromatography ,law ,Environmental science ,Filtration ,law.invention - Published
- 2021
- Full Text
- View/download PDF
48. Studying the UO2 Electrochemistry In Situ Using SEM
- Author
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Jiyoung Son, Sayandev Chatterjee, Xiao-Ying Yu, Edgar C. Buck, and Jennifer Yao
- Subjects
In situ ,Materials science ,Nanotechnology ,Electrochemistry ,Instrumentation - Published
- 2020
- Full Text
- View/download PDF
49. Nanoscale Diffusion of Lead in 300Ma Old UTi2O6 Mineral
- Author
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Shalini Tripathi, Jesse Ward, Edgar C. Buck, Dallas D. Reilly, Andrew M. Duffin, and Timothy G. Lach
- Subjects
Mineral ,Materials science ,Lead (geology) ,Chemical engineering ,Diffusion (business) ,Instrumentation ,Nanoscopic scale - Published
- 2020
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50. Unveiling the Early Stages of the F-element Oxalate Growth Evolution with Cryo-TEM
- Author
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Edgar C. Buck, Christopher Armstrong, Jennifer Carter, Gabriel B. Hall, Jennifer Solits, Shalini Tripathi, Cyrena Parker, Bruce K. McNamara, Tenisha Meadows, and Karen Kruska
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Crystallography ,chemistry.chemical_compound ,Cryo tem ,Chemistry ,Instrumentation ,Oxalate - Published
- 2020
- Full Text
- View/download PDF
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