1. Molecular profiling of osteosarcoma in children and adolescents from different age groups using a next-generation sequencing panel
- Author
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F.T. de Lima, G.M. Guimarães, Maria Teresa de Seixas Alves, Francine Tesser-Gamba, C.R.P. Donato-Macedo, Rossimar Laura de Oliveira, Antonio Sergio Petrilli, Silvia Regina Caminada de Toledo, and Reynaldo Jesus Garcia-Filho
- Subjects
Male ,Oncology ,Cancer Research ,medicine.medical_specialty ,Adolescent ,DNA Copy Number Variations ,Somatic cell ,Bone Neoplasms ,PDGFRA ,Biology ,Germline ,DNA sequencing ,Germline mutation ,Internal medicine ,Biomarkers, Tumor ,Genetics ,medicine ,Humans ,Genetic Predisposition to Disease ,Child ,Molecular Biology ,Gene ,Osteosarcoma ,Incidence (epidemiology) ,High-Throughput Nucleotide Sequencing ,Prognosis ,medicine.disease ,Mutation ,Female ,Follow-Up Studies - Abstract
Osteosarcoma (OS) is a malignant bone tumor, with a peak of incidence in the second decade of life and possibly associated with the presence of germline mutations. Besides, clinicians have pointed to a second, rarer group of patients that develops OS before 10 years old. Here we access, through next-generation sequencing (NGS) strategy, the genetic alterations present in OS and blood samples from patients diagnosed before and during the second decade of life. A custom NGS panel, designed for the main alterations described in childhood and adolescence neoplasms, named Oncomine Childhood Cancer Research Assay (OCCRA©), was used. Of all 84 OS samples investigated, 42 (50%) presented some somatic variant, with TP53, MYC, CDK4, RB1 and PDGFRA genes harboring the most observed genetic variants. MYC CNVs were more frequent in tumors from patients diagnosed before 10 years old (X21= 5.18, p = 0.023). Additionally, patients diagnosed during the second decade of life presented a higher percentage of somatic and germline variants. Germline variants in TP53 and RB1 were found in 5 of the 11 (45.5%) patients analyzed. Clinical variables and tumor histopathological characteristics were also collected and correlated with our molecular findings.
- Published
- 2021
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