27 results on '"Akalin, E."'
Search Results
2. Influence of chemical process on structural and optical properties of as-grown and thermal annealed GaAsBi alloys
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Dönmez, Ömer, Kara, K., Erol, Ayse, AKALIN, E., Makhloufi, Hajer, Arnoult, Alexandre, Fontaine, Chantal, Université d'Istanbul, Équipe Photonique (LAAS-PHOTO), Laboratoire d'analyse et d'architecture des systèmes (LAAS), Université Toulouse Capitole (UT Capitole), Université de Toulouse (UT)-Université de Toulouse (UT)-Institut National des Sciences Appliquées - Toulouse (INSA Toulouse), Institut National des Sciences Appliquées (INSA)-Université de Toulouse (UT)-Institut National des Sciences Appliquées (INSA)-Université Toulouse - Jean Jaurès (UT2J), Université de Toulouse (UT)-Université Toulouse III - Paul Sabatier (UT3), Université de Toulouse (UT)-Centre National de la Recherche Scientifique (CNRS)-Institut National Polytechnique (Toulouse) (Toulouse INP), Université de Toulouse (UT)-Université Toulouse Capitole (UT Capitole), Université de Toulouse (UT), Service Techniques et Équipements Appliqués à la Microélectronique (LAAS-TEAM), Prof. Kirstin Volz, Université Toulouse - Jean Jaurès (UT2J)-Université Toulouse 1 Capitole (UT1), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Institut National des Sciences Appliquées - Toulouse (INSA Toulouse), Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Institut National Polytechnique (Toulouse) (Toulouse INP), Université Fédérale Toulouse Midi-Pyrénées-Université Toulouse - Jean Jaurès (UT2J)-Université Toulouse 1 Capitole (UT1), and Université Fédérale Toulouse Midi-Pyrénées
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[PHYS.COND.CM-MS]Physics [physics]/Condensed Matter [cond-mat]/Materials Science [cond-mat.mtrl-sci] ,[SPI.OPTI]Engineering Sciences [physics]/Optics / Photonic ,ComputingMilieux_MISCELLANEOUS ,[SPI.MAT]Engineering Sciences [physics]/Materials - Abstract
International audience
- Published
- 2017
3. Effects of DNA methylation on progression to interstitial fibrosis and tubular atrophy in renal allograft biopsies: a multi-omics approach
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Bontha, S V, Maluf, D G, Archer, K J, Dumur, C I, Dozmorov, M G, King, A L, Akalin, E, Mueller, T F, Gallon, L, Mas, V R, University of Zurich, and Mas, V R
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2747 Transplantation ,fibrosis ,2723 Immunology and Allergy ,genomics ,graft survival ,2736 Pharmacology (medical) ,molecular biology ,610 Medicine & health ,10035 Clinic for Nephrology ,translational research / science ,kidney transplantation / nephrology - Published
- 2017
4. Omuz Problemi Olan Hastaların Genel Özellikleri
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AKALIN, E., EL, Ö., BİRCAN, Ç., GÜLBAHAR, S., ÖZKAN, M., BACAKOĞLU, K., YILMAZ, S., KANER, B., ŞAHİN, E., EKİN, A., and ÖNCEL, S.
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Omuz ağrısı,rotator kaf rüptürü,subakromiyal sıkışma sendromu - Abstract
Amaç: Omuz ekleminden ve özellikle de eklem çevresindeki yumuşak dokulardan kökenalan problemler üst ekstremite ağrılarının en önemli nedenini oluşturur. Çalışmamızın amacıomuz ağrısı yakınması ile başvuran hastaların klinik özelliklerinin değerlendirilmesidir.Gereç ve yöntem: Omuz ağrısı yakınması ile başvuran 709 hastanın 744 omuzuretrospektif olarak değerlendirildi. Bulgular: Hastaların yaş ortalaması 55,16 10,88 yıl idi ve 395 hastada sağ, 279 hastadasol ve 35 hastada her iki omuz etkilenmişti. Vakaların %35,4’ünde travma öyküsü mevcuttu.Klinik ve radyolojik olarak yapılan değerlendirmelerde hastaların %45’inde subakromiyalsıkışma sendromu, %39,4’ünde rotator kaf rüptürü, %1,5’inde bisipital tendinit, %6,5’indeakromioklavikuler eklem dejenerasyonu, %2,2’sinde kalsifik tendinit, %5’inde donuk omuzve %0,4’ünde glenohumeral eklem artrozu saptandı. Subakromiyal sıkışma sendromu olanhastalar ile rotator kaf rüptürü olan hastaların karşılaştırılmasında rüptürü olan hastalarınyaş ortalamalarının daha yüksek ve “American Shoulder Elbow Score” (ASES) skorlarınındaha düşük olduğu ancak “Constant” skorları arasında herhangi bir fark olmadığı görüldü.Bu iki grup etiolojideki travma açısından değerlendirildiğinde rotator kaf rüptürü olan gruptatravma öyküsünün subakromiyal sıkışma sendromlu hastalara göre anlamlı olarak dahafazla olduğu ve travma öyküsünün rotator kafta rüptür riskini 2,9 kat arttırdığı görüldü. Sonuç: Omuz ağrısı nedenleri arasında rotator kaf sorunları çok önemli bir yer tutmaktadır.Travma ve yaş rotator kafta rüptür insidansını arttırmaktadır
- Published
- 2015
5. The role of regulatory T-cells, FOXP3 and transforming growth factor beta in gliomas – insights into immunosuppressive mechanisms
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Schipmann, S, Akalin, E, Warneke, N, Schroeteler, J, Schwake, M, Stummer, W, Brunner, G, and Ewelt, C
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Tumour microenvironment ,ddc: 610 ,animal diseases ,bacteria ,chemical and pharmacologic phenomena ,Glioma ,biochemical phenomena, metabolism, and nutrition ,610 Medical sciences ,Medicine ,regulatory T cells - Abstract
Objective: Not only are regulatory T cells (Tregs) an essential component of the immune system in maintaining immunologic self-tolerance by suppressing expansion of immune cells but they are also involved in the suppression of anti-tumour immune responses. The transcription factor forkhead box P3 (FOXP3)[for full text, please go to the a.m. URL], 66. Jahrestagung der Deutschen Gesellschaft für Neurochirurgie (DGNC)
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- 2015
- Full Text
- View/download PDF
6. Brown tumor mimicking bone metastases in a patient with chronic renal failure: A case report
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Kizmazoglu, C, Sevin, IE, Akalin, E, Uzunoglu, I, Rezanko, TA, and Yüceer, N
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ddc: 610 ,chronic renal failure ,Brown tumor ,paraparesis ,610 Medical sciences ,Medicine - Abstract
Objective: Brown tumor is as a result of untreated primary or secondary hyperparathyroidism. A “brown tumor” is known as osteitis fibrosa cystica or von Recklinghausen disease, is not a true neoplasm. Patients with chronic renal failure (CRF) on long-term haemodialysis are at risk of secondary[for full text, please go to the a.m. URL], 65. Jahrestagung der Deutschen Gesellschaft für Neurochirurgie (DGNC)
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- 2014
- Full Text
- View/download PDF
7. New Ring-Like Models and ab Initio DFT Study of the Medium-Range Structures, Energy and Electronic Properties of GeSe2 Glass
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Holomb, R., Mitsa, V., Akyuz, S., and Akalin, E.
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Ab Initio ,GeSe2 Glass ,Sonlu Kümeler ,Finite Clusters ,DFT - Abstract
Ab initio DFT calculations were performed on GenSem nanoclusters (n=2, 3, 5, 6, 12; m=6-9, 14, 16, 30) that represent the local structure of GeSe2 glass and on some defect' GenSem clusters that are thought to be related to the inhomogeneity of the structure at the nanoscale. The optimal geometries, total energies and their derivatives as well as the electronic properties of GenSem nanoclusters were calculated using traditional DFT method. In addition, the TD-DFT method has been applied to calculate the electronic band gaps of the clusters. The calculated physico-chemical properties of GenSem nanoclusters and their couplings with the local-and medium-range order structure formations in GeSe2 glass are analysed and discussed.
- Published
- 2013
8. RARE AND ENDEMIC TAXA OF APIACEAE IN TURKEY AND THEIR CONSERVATION SIGNIFICANCE
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N. ÖZHATAY, E. AKALIN1, E. ÖZHATAY, S. ÜNLÜ, N. Özhatay, E. Akalin, E. Özhatay
- Abstract
Apiaceae (Umbellİferae) familyası Türkiye'deki sekizinci büyük familyadır ve 53'ü sadece bir tür taşıyan 101 cinse ait 451 türle temsil edilir. P. H. Davis' "Flora of Turkey and the East Aegean Islands, vol. 4 in 1972" adlı eserinden sonar Türkiye florasına 4 cins 53 tür ilave edilmiştir. 37'i tehlike altında 159 endemik türle familya'nın Türkiye'deki endemism oranı %33'tür. Oldukça local 4 monotipik endemik cins bulunur: Ekimia bornmuelleri, Microsciadium mimttum, Olymposciadium caespitosum ve Crenosciadium siifolium. Diğer endemic cinsler (Vo\QQ endemik): Rhabdosciadium (2 sp.), Muretia (1 sp.), Kundmannia (2 sp.), Froriepia (1 sp.), Stenotaenia (1 sp.).Ferula hahphila ve F. Orientalis Bern Sözleşmesi Ek I'de kayıtlı, habitatı mutlaka korunması gereken türlerdir.
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- 2013
9. CD28-B7 costimulatory blockade by CTLA4Ig prevents actively induced experimental autoimmune encephalomyelitis and inhibits Th1 but spares Th2 cytokines in the central nervous system
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samia khoury, Akalin, E., Chandraker, A., Turka, L. A., Linsley, P. S., Sayegh, M. H., and Hancock, W. W.
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Immunology ,Immunology and Allergy - Abstract
We studied the contribution of the CD28-B7 costimulatory T cell activation pathway to the pathogenesis of experimental autoimmune encephalomyelitis in the Lewis rat model. Systemic administration of CTLA4Ig suppressed clinical disease and was effective even when CTLA4Ig was delayed until day 10 postimmunization, a time when pathologic disease is evident. This protection was not reversible by systemic administration of high doses of IL-2. Detailed immunohistologic studies showed that CTLA4Ig therapy resulted in suppression of the inflammatory response with inhibition of Th1 (IL-2 and IFN-gamma) and sparing of Th2 (IL-4, IL-10, and IL-13) cytokines in the central nervous system. These results indicate that the CD28-B7 T cell costimulatory pathway plays an important role in experimental autoimmune encephalomyelitis, a Th1-mediated disease, and suggest that blockade of this costimulatory pathway protects against active disease by causing a state of immune deviation towards Th2 function. The ability of CTLA4Ig to treat animals with pathologically established disease may have important clinical implications for patients with multiple sclerosis.
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- 1995
10. Functional Magnetic Resonance Imaging of the Effects of Low-frequency
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Kocyigit, F, Akalin, E, Gezer, NS, Orbay, O, Kocyigit, A, and Ada, E
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resonance imaging ,pain ,transcutaneous electric nerve stimulation ,functional magnetic - Abstract
Objectives: Transcutaneous electrical nerve stimulation (TENS) is an analgesic current that is used in many acute and chronic painful states. The aim of this study was to investigate central pain modulation by low-frequency TENS. Methods: Twenty patients diagnosed with subacromial impingement syndrome of the shoulder were enrolled in the study. Patients were randomized into 2 groups: low-frequency TENS and sham TENS. Painful stimuli were delivered during which functional magnetic resonance imaging scans were performed, both before and after treatment. Ten central regions of interest that were reported to have a role in pain perception were chosen and analyzed bilaterally on functional magnetic resonance images. Perceived pain intensity during painful stimuli was evaluated using visual analog scale (VAS). Results: In the low-frequency TENS group, there was a statistically significant decrease in the perceived pain intensity and pain-specific activation of the contralateral primary sensory cortex, bilateral caudal anterior cingulate cortex, and of the ipsilateral supplementary motor area. There was a statistically significant correlation between the change of VAS value and the change of activity in the contralateral thalamus, prefrontal cortex, and the ipsilateral posterior parietal cortex. In the sham TENS group, there was no significant change in VAS value and activity of regions of interest. Discussion: We suggest that a 1-session low-frequency TENS may induce analgesic effect through modulation of discriminative, affective, and motor aspects of central pain perception.
- Published
- 2012
11. Resorption of a sequestered cervical disc confirmed by magnetic resonance imaging: long term follow-up. Case report
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Kocyigit, F., Kocyigit, A., Manisali, M., Akalin, E., and MANİSALI, METİN
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Male ,Spinal cord ,intervertebral disk ,Hernia ,Remission, Spontaneous ,article ,cervical spine ,Middle Aged ,Magnetic Resonance Imaging ,remission ,Cervical Vertebrae ,case report ,Humans ,pathology ,human ,nuclear magnetic resonance imaging - Abstract
In literature cervical disc extrusions are considered by most neurosurgeons a definitive indication for surgery. This approach may stem from a fear of disc fragment migration with neurological deterioration. We report a rare case of cervical disc sequestration with a seldom prognosis which resolved spontaneously in a two-month follow-up on magnetic resonance imaging (MRI), emphasizing the efficacy and applicability of conservative treatment in cervical disc herniations. Even with the basic conservative treatment methods we observed the prominent decrease in symptoms and spontaneous total resorption of the sequestered fragment. Conservative treatment in sequestered cervical discs with no neurological deficit can be an alternative therapeutic approach with the guidence of MRI.
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- 2011
12. resonance imaging: long term follow-up. Case report
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Kocyigit, F, Kocyigit, A, Manisali, M, and Akalin, E
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Magnetic resonance imaging ,Hernia ,Spinal cord - Abstract
In literature cervical disc extrusions are considered by most neurosurgeons a definitive indication for surgery. This approach may stem from a fear of disc fragment migration with neurological deterioration. We report a rare case of cervical disc sequestration with a seldom prognosis which resolved spontaneously in a two-month follow-up on magnetic resonance imaging (MRI), emphasizing the efficacy and applicability of conservative treatment in cervical disc herniations. Even with the basic conservative treatment methods we observed the prominent decrease in symptoms and spontaneous total resorption of the sequestered fragment. Conservative treatment in sequestered cervical discs with no neurological deficit can be an alternative therapeutic approach with the guidence of MRI.
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- 2011
13. Internal medicine in Europe: How to cope with the future? An official EFIM strategy document
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Kramer, M.H.H., Akalin, E., Soto, M.A.D., Bitterman, H., Ferreira, F., Higgens, C., Schumm-Draeger, P.M., Koberling, J., Tanriover, M.D., Bauer, W., Internal medicine, and ICaR - Ischemia and repair
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- 2010
14. Musculoskeletal problems in pathologist
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Akalin, E., El, Ö, Baydar, M., Ergör, A., Yörükoǧlu, K., Gülbahar, S., Kizil, R., ÇIGDEM BIRCAN, and Alper, S.
- Abstract
Microscope work is straining both the visual and the musculoskeletal systems. Many ergonomic risk factors are presented in the microscope work for musculoskeletal system complaints. Awkward and static posture, high repetition, contact stresses and working for a prolonged time are the risk factors. A survey investigating musculoskeletal pain and ergonomic arrangement was developed and sent to pathologists who work in various hospitals in İzmir and the cities nearby to investigate the frequency of musculoskeletal problems and its relationship with some ergonomic factors and duration of work in pathologists. Neck, upper back and finger pain was significantly higher in subjects who worked more than 4 hours a day when compared with subjects who work less than 4 hours. The effects of microscope work on the occurrence of musculoskeletal disorders should be taken seriously in pathologists.
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- 2006
15. Rehabilitation and functional results after prosthetic knee replacement following resection of a malignant tumor: a report of four cases
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Gülbahar, S., Baran, Ö, Keskin Pehlivan, E., ÇIGDEM BIRCAN, El, Ö, Kizil, R., Akalin, E., and Havitçioǧlu, H.
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- 2006
16. On the principles of B-smooth discontinuous flows
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Akalin, E. and Akhmet, M. U.
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37-99, 34A37 ,FOS: Mathematics ,Dynamical Systems (math.DS) ,Mathematics - Dynamical Systems - Abstract
In this paper, we define B-smooth discontinuous dynamical systems which can be used as models of various processes in mechanics, electronics, biology and medicine. We find sufficient conditions to guarantee the existence of such systems. These conditions are easy to verify. Appropriate examples are constructed., Comment: This paper has been withdrawn by the second author, since precised results of the paper are published in the book: Principles of discontinuous dynamical systems, Springer, 2010
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- 2004
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17. Susceptibility testing of Klebsiella spp - an international collaborative study in quality assessment
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Jenks, PJ Akalin, E Bergan, T Dornbusch, K Howard, AJ and Hryniewicz, W Jones, JRN King, A McLaughlin, JC and Ozkuyumcu, C Percival, A Phillips, I Reeves, DS Spencer, R Vatopoulos, AC Warren, R Williams, JD
- Abstract
In order to compare the prevalence of antibiotic resistance in different geographical areas, it is necessary to ensure agreement between laboratories on the assignment of strains to ‘susceptible’ and ‘resistant’ categories. An international quality assessment was performed to investigate the performance of susceptibility testing of Klebsiella spp. Ninety-five strains of klebsiellae were selected from clinical isolates at the London Hospital Medical College (LHMC). These included strains with a diversity of susceptibility profiles to amoxycillin/clavulanate, piperacillin, ceftazidime, cefuroxime, ciprofloxacin, gentamicin and trimethoprim. The strains were sent to 13 participating laboratories in Europe and the USA and laboratories were asked to test the susceptibility of these strains to these antibiotics by their usual methods. They were also asked to provide details of the method used to test susceptibility. Several different standard recommended testing methods were used. Reporting of susceptibilities was generally accurate, but a number of anomalies were noted. Discrepancies of reporting between the LHMC and the participating laboratories was more marked for resistant strains, particularly in the detection of resistance to cefuroxime and ciprofloxacin, as well as the assignment of susceptibility and resistance to piperacillin and amoxycillin/clavulanate. Some discrepancies could be attributed to the use of different breakpoints, leading to differing assignment of susceptibility. Methodological variations including disc content, inoculum and failure to measure and interpret zone sizes consistently also led to anomalies. This quality assessment programme has helped to identify problems in susceptibility testing which should be investigated further.
- Published
- 1998
18. Susceptibility testing of Haemophilus influenzae - An international collaborative study in quality assessment
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Yeo, S.F. Akalin, E. Arikan, S. Auckenthaler, R. Bergan, T. Dornbusch, K. Howard, A.J. Hryniewicz, W. Jones, R.N. Koupari, G. Legakis, N.J. McLaughlin, J. Ozkuyumcu, C. Percival, A. Phillips, I. Reeves, D. Spencer, R. Warren, R.E. Williams, J.D.
- Abstract
In order to compare the prevalence of antibiotic resistance in different geographical areas, it is necessary to ensure that agreement is achieved between laboratories on the assignment of strains to 'susceptible' and 'resistant' categories. An international quality assessment study, involving 15 laboratories in eight countries, was performed to investigate the standard of performance of the susceptibility testing of Haemophilus influenzae. One hundred and fifty strains of H. influenzae were distributed from the London Hospital Medical College (LHMC) to all laboratories who were asked to test the susceptibility of the strains to ampicillin, chloramphenicol, tetracycline, trimethoprim, cephalosporins and ciprofloxacin. Laboratories were also asked to provide the details of methodology to test the susceptibility. Significant discrepancy between the LHMC and the participating laboratories appeared in the detection of resistance to ampicillin (especially β-lactamase-negative strains resistant to ampicillin) as well as the assignment of susceptibility and resistance to chloramphenicol, tetracycline and trimethoprim. Often these reflected the use of inappropriate breakpoints which led to erroneous assignment of susceptibility. Other variations including disc content, medium and supplement, inoculum as well as failure to measure zone sizes properly also led to some repeating anomalies.
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- 1996
19. Serum bactericidal and opsonic activities in chronic lymphocytic leukemia and multiple myeloma
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Dincer Firat, Emin Kansu, Civelek C, Tekesin O, Y. Laleli, and Akalin E
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Blood Bactericidal Activity ,biology ,business.industry ,Incidence (epidemiology) ,Chronic lymphocytic leukemia ,Immunoglobulins ,Hematology ,Complement System Proteins ,Opsonin Proteins ,medicine.disease ,behavioral disciplines and activities ,Leukemia, Lymphoid ,Antibody opsonization ,hemic and lymphatic diseases ,Immunopathology ,Immunology ,biology.protein ,Medicine ,Humans ,Risk factor ,Antibody ,business ,Multiple Myeloma ,Opsonin ,Multiple myeloma - Abstract
Susceptibility to infection is widely recognized as the major cause of morbidity and mortality in patients with CLL and MM. The present study was designed to investigate the serum bactericidal (SBA) and serum opsonic activities (SOA) in 12 CLL and 12 MM patients, and results were compared to 20 normals. SBA and SOA were measured by a new radiometric assay. SBA was found to be normal in 11 patients with CLL and in all 12 patients with MM. In contrast, SOA was significantly lower in 11 out of 12 patients with CLL. Ten of twelve patients with MM also had significantly lower SOA compared to those of controls. No correlation was detected between the serum immunoglobulin and complement levels of the patients or between the degree of the opsonic defect and the incidence of infection. In mixture experiments, untreated normal serum partially corrected the opsonic activity of CLL and MM serum. The results suggest the presence of a possible inhibitor in the serum of patients with two well-known B-lymphocyte-derived disorders.
- Published
- 1986
20. Generalized joint hypermobility in patients with traumatic anterior shoulder instability
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El, Ö, Yilmaz, S., Özkan, M., Bacakoǧlu, A. K., Akalin, E., Gülbahar, S., ÇIGDEM BIRCAN, and Kizil, R.
- Abstract
The aim of this study is to evaluate the relationship between traumatic unilateral shoulder instability with Bankart lesion and generalized joint hypermobility. Twenty eight patients and 28 control subjects were included in the study. All of the patients had had their first episode of dislocation during a single definite trauma and had traumatic Bankart lesion which was detected with magnetic resonance imaging. All patients and control subjects were evaluated using Beighton scoring system for generalized joint hypermobility. The mean age of the shoulder instability group and the control group was 26.10 ± 7.60 and 26.64 ± 7.47 years, respectively. Beighton score was found as 3.21 ± 2.11 in the patient group and 2.39 ± 2.06 in the control group. Thirteen cases (46.4%) in the instability group and nine cases (32.1%) in the control group were found to be hypermobile. This difference was not statistically significant. Two patients were reoperated because of recurrence. Both of them had generalized joint hypermobility. Hypermobility may be a predisposing factor to acute traumatic anterior instability and this hypothesis can be investigated in larger series.
21. The effect of knee joint hypermobility on joint position sense,Di̇z eklem hi̇permobi̇li̇tesi̇ni̇n eklem pozi̇syon hi̇ssi̇ne etki̇si̇
- Author
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Gülbahar, S., Torun, B., Bircan, Ç, El, Ö, Akalin, E., Yucel Demiral, Kizil, R., Baydar, M., and Alper, S.
22. Cathelicidin as a link between sarcoidosis and tuberculosis
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Korucu, E., Ozyigit, L. P., Ortakoylu, M. G., Bahadir, A., Akalin, E. S., Kara, A., Hafize Uzun, Onal, B., and Caglar, E.
23. Clinical outcomes after conversion from brand-name tacrolimus (Prograf) to a generic formulation in renal transplant recipients: A retrospective cohort study
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Marfo K, Samuel Aitken, and Akalin E
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surgical procedures, operative ,chemical and pharmacologic phenomena ,Features - Abstract
After kidney transplant recipients who received Prograf were switched to generic tacrolimus, most differences in the safety and effectiveness of the medications were not considered clinically relevant.
24. Diagnostic Efficacy of Aspergillus Galactomannan Lateral Flow Assay in Patients with Hematological Malignancies: A Prospective Multicenter Study
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ODABAŞI, ZEKAVER and Alhan O., Saba R., Akalin E. H., Ener B., Ture Yuce Z., Deveci B., Guncu M. M., Kahveci H. N., Yilmaz A. F., Odabasi Z.
- Subjects
Hematological malignancy ,Galactomannan ,Invasive aspergillosis ,Lateral flow assay ,Enzyme immunoassay - Abstract
Background A rapid and reliable diagnostic test is needed to reduce mortality through early diagnosis of invasive aspergillosis (IA) in patients with hematological malignancies. Objective To evaluate the efficacy of serum and bronchoalveolar lavage (BAL) Aspergillus galactomannan lateral flow assay (GM-LFA) in IA diagnosis and determine the correlation of GM-LFA with GM enzyme immunoassay (GM-EIA) in patients with hematological malignancies. Methods In this prospective multicenter study, we used serum and BAL fluid samples from patients with hematological malignancies and suspected IA and performed GM-LFA and GM-EIA. According to the EORTC/MSGERC criteria, patients were grouped as proven (n = 6), probable (n = 22), possible IA (n = 55), or no IA (n = 88). The performance of serum GM-LFA at 0.5 optical density index (ODI) and area under the curve (AUC) were calculated. Spearman’s correlation analysis and kappa statistics were performed to determine the agreement between the tests. Results GM-LFA showed an AUC of 0.832 in proven/probable IA (sensitivity [SEN], specificity [SPE], negative predictive value [NPV], and diagnostic accuracy were 75%, 100%, 92.6%, and 93.9%, respectively, at a 0.5 ODI) versus that in no IA. A moderate positive correlation was noted between the GM-LFA and GM-EIA scores (p = 0.01). The observed agreement between the tests at 0.5 ODI was almost perfect (p \0.001). After excluding patients who received mold-active antifungal prophylaxis or treatment, the SEN, SPE, NPV, and diagnostic accuracy for proven/probable IA were 76.2%, 100%, 93.3%, and 94.5%, respectively. Conclusions Serum GM-LFA demonstrated high discriminatory power and good diagnostic performance for IA in patients with hematological malignancies.
- Published
- 2023
25. Recurrence of iga nephropathy after kidney transplantation in adults
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Pitchaphon Nissaisorakarn, Xingxing S. Cheng, Claudia Bini, Audrey Uffing, Andrea Carla Bauer, Paolo Malvezzi, Fabiana Agena, Samira Farouk, Gaetano La Manna, Jesse D. Schold, Gianna Mastroianni-Kirsztajn, Marie-Camille Lafargue, Stefan P Berger, Thomas Jouve, Nikhil Agrawal, Marilda Mazzali, Mathilde Bugnazet, Roman Reindl-Schwaighofer, Saif A. Muhsin, Giorgia Comai, Carlucci Gualberto Ventura, Rainer Oberbauer, Leonardo V. Riella, Alina Morlock, Aileen X. Wang, Enver Akalin, Julio Pascual, Seraina von Moos, Paolo Cravedi, María José Pérez-Sáez, Elias David-Neto, Anna Buxeda, Helio Tedesco-Silva, Carla Burballa, Roberto Ceratti Manfro, Harald Seeger, Het Patel, Juliana Mansur, Luis Sanchez Russo, Omar Alani, Groningen Kidney Center (GKC), Groningen Institute for Organ Transplantation (GIOT), Uffing A., Perez-Saez M.J., Jouve T., Bugnazet M., Malvezzi P., Muhsin S.A., Lafargue M.-C., Reindl-Schwaighofer R., Morlock A., Oberbauer R., Buxeda A., Burballa C., Pascual J., Von Moos S., Seeger H., La Manna G., Comai G., Bini C., Russo L.S., Farouk S., Nissaisorakarn P., Patel H., Agrawal N., Mastroianni-Kirsztajn G., Mansur J., Tedesco-Silva H., Venturae C.G., Agena F., David-Neto E., Akalin E., Alani O., Mazzali M., Manfro R.C., Bauer A.C., Wang A.X., Cheng X.S., Schold J.D., Berger S.P., Cravedi P., and Riella L.V.
- Subjects
Adult ,Male ,medicine.medical_specialty ,recurrence ,Epidemiology ,Biopsy ,glomerular disease ,graft survival ,kidney transplantation ,Kidney ,IgA deposition ,Critical Care and Intensive Care Medicine ,Gastroenterology ,Antibodies ,Nephropathy ,Risk Factors ,Internal medicine ,medicine ,Humans ,Cumulative incidence ,Kidney transplantation ,Retrospective Studies ,Transplantation ,Proportional hazards model ,business.industry ,Incidence ,Incidence (epidemiology) ,Hazard ratio ,Glomerulonephritis, IGA ,Retrospective cohort study ,Original Articles ,IgA nephropathy ,Middle Aged ,Allografts ,medicine.disease ,United States ,Confidence interval ,Europe ,Nephrology ,Kidney Failure, Chronic ,Female ,business ,Brazil - Abstract
Background and objectives: In patients with kidney failure due to IgA nephropathy, IgA deposits can recur in a subsequent kidney transplant. The incidence, effect, and risk factors of IgA nephropathy recurrence is unclear, because most studies have been single center and sample sizes are relatively small.Design, setting, participants, & measurements: We performed a multicenter, international, retrospective study to determine the incidence, risk factors, and treatment response of recurrent IgA nephropathy after kidney transplantation. Data were collected from all consecutive patients with biopsy-proven IgA nephropathy transplanted between 2005 and 2015, across 16 “The Post-Transplant Glomerular Disease” study centers in Europe, North America, and South America.Results: Out of 504 transplant recipients with IgA nephropathy, recurrent IgA deposits were identified by kidney biopsy in 82 patients; cumulative incidence of recurrence was 23% at 15 years (95% confidence interval, 14 to 34). Multivariable Cox regression revealed a higher risk for recurrence of IgA deposits in patients with a pre-emptive kidney transplant (hazard ratio, 3.45; 95% confidence interval, 1.31 to 9.17) and in patients with preformed donorspecific antibodies (hazardratio, 2.59; 95%confidence interval, 1.09 to 6.19).Afterkidneytransplantation,development of de novo donor-specific antibodies was associated with subsequent higher risk of recurrence of IgA nephropathy (hazard ratio, 6.65; 95% confidence interval, 3.33 to 13.27). Immunosuppressive regimen was not associated with recurrent IgA nephropathy in multivariable analysis, including steroid use. Graft loss was higher in patients with recurrence of IgA nephropathy compared with patients without (hazard ratio, 3.69; 95% confidence interval, 2.04 to 6.66), resulting in 32% (95% confidence interval, 50 to 82) graft loss at 8 years after diagnosis of recurrence.Conclusions: In our international cohort, cumulative risk of IgA nephropathy recurrence increased after transplant and was associated with a 3.7-fold greater risk of graft loss.
- Published
- 2021
26. Recurrence of FSGS after Kidney Transplantation in Adults
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Carlos Arias-Cabrales, Thomas Jouve, María José Pérez-Sáez, Leonardo V. Riella, Enver Akalin, Paolo Cravedi, Stefan P Berger, Kuo-Kai Chin, Carlucci Gualberto Ventura, Xingxing S. Cheng, Paolo Malvezzi, Claudia Bini, Silvia Regina Hokazono, Gilberto M.V. Neto, Audrey Uffing, Mathilde Bugnazet, Saif A. Muhsin, Marilda Mazzali, Anna Buxeda, Roberto Ceratti Manfro, Fabiana Agena, Miguel C. Riella, Nikhil Agrawal, Frederico de Sottomaior Drumond, Gaetano La Manna, Giorgia Comai, Omar Alani, Meredith Haverly, Suraj Sarvode Mothi, Samira S. Farouk, Elias David-Neto, Helio Tedesco-Silva, Michelle M. O’Shaughnessy, Juliana Mansur, Gianna Mastroianni Kirsztajn, Andrea Carla Bauer, Groningen Institute for Organ Transplantation (GIOT), Groningen Kidney Center (GKC), Uffing A., Perez-Saez M.J., Mazzali M., Manfro R.C., Bauer A.C., Drumond F.S., O'shaughnessy M.M., Cheng X.S., Chin K.-K., Ventura C.G., Agena F., David-Neto E., Mansur J.B., Kirsztajn G.M., Tedesco-Silva H., Neto G.M.V., Arias-Cabrales C., Buxeda A., Bugnazet M., Jouve T., Malvezzi P., Akalin E., Alani O., Agrawal N., La Manna G., Comai G., Bini C., Muhsin S.A., Riella M.C., Hokazono S.R., Farouk S.S., Haverly M., Mothi S.S., Berger S.P., Cravedi P., and Riella L.V.
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Male ,Time Factors ,Epidemiology ,medicine.medical_treatment ,kidney disease ,030232 urology & nephrology ,graft survival ,CHILDREN ,030230 surgery ,Critical Care and Intensive Care Medicine ,Nephrectomy ,DISEASE ,FOCAL SEGMENTAL GLOMERULOSCLEROSIS ,0302 clinical medicine ,Focal segmental glomerulosclerosis ,rituximab ,cohort studies ,Interquartile range ,THERAPEUTIC PLASMA-EXCHANGE ,Medicine ,risk factors ,humans ,Kidney transplantation ,transplant recipients ,Glomerulosclerosis, Focal Segmental ,RENAL-TRANSPLANTATION ,adult ,Hazard ratio ,Middle Aged ,renal transplantation ,kidney diseases ,sample size ,Europe ,risk factor ,plasmapheresis ,Nephrology ,Retreatment ,Female ,Brazil ,Immunosuppressive Agents ,Cohort study ,medicine.medical_specialty ,kidney ,recurrence ,kidney transplantation ,body mass index ,ALLOGRAFT ,Risk Assessment ,03 medical and health sciences ,transplant recipient ,Internal medicine ,human ,Risk factor ,Retrospective Studies ,plasmapheresi ,Transplantation ,business.industry ,Proportional hazards model ,transplant outcomes ,Editorials ,registries ,transplant outcome ,medicine.disease ,United States ,RECIPIENTS ,registrie ,RESISTANT NEPHROTIC SYNDROME ,focal segmental glomerulosclerosi ,SAMPLE-SIZE ,incidence ,treatment outcome ,RISK-FACTORS ,business ,cohort studie - Abstract
Background and objectives FSGS recurrence after kidney transplantation is a major risk factor for graft loss. However, the natural history, clinical predictors, and response to treatment remain unclear because of small sample sizes and poor generalizability of single-center studies, and disease misclassification in registry-based studies. We therefore aimed to determine the incidence, predictors, and treatment response of recurrent FSGS in a large cohort of kidney transplant recipients. Design, setting, participants, & measurements The Post-Transplant Glomerular Disease (TANGO) project is an observational, multicenter, international cohort study that aims to investigate glomerular disease recurrence post-transplantation. Transplant recipients were screened for the diagnosis of idiopathic FSGS between 2005 and 2015 and details were recorded about the transplant, clinical outcomes, treatments, and other risk factors. Results Among 11,742 kidney transplant recipients screened for FSGS, 176 had a diagnosis of idiopathic FSGS and were included. FSGS recurred in 57 patients (32%; 95% confidence interval [95% CI], 25% to 39%) and 39% of them lost their graft over a median of 5 (interquartile range, 3.0–8.1) years. Multivariable Cox regression revealed a higher risk for recurrence with older age at native kidney disease onset (hazard ratio [HR], 1.37 per decade; 95% CI, 1.09 to 1.56). Other predictors were white race (HR, 2.14; 95% CI, 1.08 to 4.22), body mass index at transplant (HR, 0.89 per kg/m2; 95% CI, 0.83 to 0.95), and native kidney nephrectomies (HR, 2.76; 95% CI, 1.16 to 6.57). Plasmapheresis and rituximab were the most frequent treatments (81%). Partial or complete remission occurred in 57% of patients and was associated with better graft survival. Conclusions Idiopathic FSGS recurs post-transplant in one third of cases and is associated with a five-fold higher risk of graft loss. Response to treatment is associated with significantly better outcomes but is achieved in only half of the cases.
- Published
- 2020
27. Raman and AFM studies on nominally undoped, p- and n-type GaAsBi alloys
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Kamuran Kara, Ryan B. Lewis, Elif Akalin, M. Aslan, Ayse Erol, Thomas Tiedje, Vahid Bahrami-Yekta, Erol, A, Akalin, E, Kara, K, Aslan, M, Bahrami-Yekta, V, Lewis, RB, Tiedje, T, Sakarya Üniversitesi/Tıp Fakültesi/Dahili Tıp Bilimleri Bölümü, Erol, Atila, and Aslan, Metin
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010302 applied physics ,Free electron model ,Photoluminescence ,Materials science ,Band gap ,Mechanical Engineering ,Doping ,Metals and Alloys ,Analytical chemistry ,chemistry.chemical_element ,02 engineering and technology ,021001 nanoscience & nanotechnology ,Plasma oscillation ,01 natural sciences ,Spectral line ,Bismuth ,symbols.namesake ,chemistry ,Mechanics of Materials ,0103 physical sciences ,Materials Chemistry ,symbols ,Metallurgy & Metallurgical Engineering ,0210 nano-technology ,Raman spectroscopy - Abstract
We study structural properties and surface formation of undoped, n- and p-type doped GaAsBi alloys with various bismuth compositions using Micro-Raman, Fourier Transform (FT) Raman, Photoluminescence (PL) and Atomic Force Microscopy (AFM) techniques. PL is used to determine the suitable excitation source for Raman measurements and evaluate the Raman spectroscopy results. Room temperature PL results reveal that the bandgap energy of GaAsBi decreases with increasing bismuth composition at a rate of 82meV/%Bi. In micro-Raman spectra recorded using 532 nm laser line, a peak at around 185 cm(-1) and a broad peak located between 210 and 250 cm(-1) are observed. The absence of these peaks in the Raman spectrum of low temperature (LT) growth GaAs indicates that those peaks are bismuth-induced vibrations. Besides, the forbidden transverse optical (TO) mode (269 cm(-1)) becomes more pronounced for the samples as bismuth composition increases. FT-Raman spectra taken by 1064 nm laser line of the n- and p-type samples exhibit different characteristics; while TO and longitudinal optical (LO) peaks (291 cm(-1)) are present in n-type sample as sharp vibrational peaks, a broad peak located at slightly lower wavenumber than TO mode appears and LO peak is suppressed. The ionised acceptor and free hole system respond incident electromagnetic field as plasma oscillations. Moreover, the amplitude of the plasma oscillations enhances with higher doping density. Therefore, the appearance of the broad peak in FT-Raman spectrum of p-type GaAsBi is explained with an LO-plasmon coupling (LOPC). As for n-type samples, free electrons are compensated by free holes in GaAsBi that originate from Bi-induced acceptor-like defects. Therefore, we do not observe the effects of plasma oscillations in FT-Raman spectrum. AFM results reveal that all samples have surface droplets, and the size of the droplets is not affected from doping density or doping type, but bismuth composition. The surface droplets are removed by a chemical process to investigate the effect of the droplets on Raman spectrum. Our results reveal that removing surface droplets does not change the characteristic of Raman spectrum, but enhances the Raman intensity due to the reflected light by droplets decreases, leading to more photons penetrate and scattered from inside the sample. (C) 2017 Elsevier B.V. All rights reserved.
- Published
- 2017
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