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Increased incorporation of terrestrial organic matter (t-OM) into consumer biomass (allochthony) is believed to reduce growth capacity. In this study, we examined the relationship between crustacean zooplankton allochthony and production in a boreal lake that displays strong seasonal variability in t-OM inputs. Contrary to our hypotheses, we found no effect of allochthony on production at the community and the species levels. The high-frequency seasonal sampling (time-for-space) allowed for estimating the efficiency of zooplankton in converting this external carbon source to growth. From the daily t-OM inputs in the lake (57-3,027 kg C/d), the zooplankton community transferred 0.2% into biomass (0.01-2.36 kg C/d); this level was of the same magnitude as the carbon transfer efficiency for algal-derived carbon (0.4%). In the context of the boundless carbon cycle, which integrates inland waters as a biologically active component of the terrestrial landscape, the use of the time-for-space approach for the quantifying of t-OM trophic transfer efficiency by zooplankton is a critical step toward a better understanding of the effects of increasing external carbon fluxes on pelagic food webs.

Increased incorporation of terrestrial organic matter (t-OM) into consumer biomass (allochthony) is believed to reduce growth capacity. In this study, we examined the relationship between crustacean zooplankton allochthony and production in a boreal lake that displays strong seasonal variability in t-OM inputs. Contrary to our hypotheses, we found no effect of allochthony on production at the community and the species levels. The high-frequency seasonal sampling (time-for-space) allowed for estimating the efficiency of zooplankton in converting this external carbon source to growth. From the daily t-OM inputs in the lake (57-3,027 kg C/d), the zooplankton community transferred 0.2% into biomass (0.01-2.36 kg C/d); this level was of the same magnitude as the carbon transfer efficiency for algal-derived carbon (0.4%). In the context of the boundless carbon cycle, which integrates inland waters as a biologically active component of the terrestrial landscape, the use of the time-for-space approach for the quantifying of t-OM trophic transfer efficiency by zooplankton is a critical step toward a better understanding of the effects of increasing external carbon fluxes on pelagic food webs.

Increased incorporation of terrestrial organic matter (t-OM) into consumer biomass (allochthony) is believed to reduce growth capacity. In this study, we examined the relationship between crustacean zooplankton allochthony and production in a boreal lake that displays strong seasonal variability in t-OM inputs. Contrary to our hypotheses, we found no effect of allochthony on production at the community and the species levels. The high-frequency seasonal sampling (time-for-space) allowed for estimating the efficiency of zooplankton in converting this external carbon source to growth. From the daily t-OM inputs in the lake (57-3,027 kg C/d), the zooplankton community transferred 0.2% into biomass (0.01-2.36 kg C/d); this level was of the same magnitude as the carbon transfer efficiency for algal-derived carbon (0.4%). In the context of the boundless carbon cycle, which integrates inland waters as a biologically active component of the terrestrial landscape, the use of the time-for-space approach for the quantifying of t-OM trophic transfer efficiency by zooplankton is a critical step toward a better understanding of the effects of increasing external carbon fluxes on pelagic food webs.

Increased incorporation of terrestrial organic matter (t-OM) into consumer biomass (allochthony) is believed to reduce growth capacity. In this study, we examined the relationship between crustacean zooplankton allochthony and production in a boreal lake that displays strong seasonal variability in t-OM inputs. Contrary to our hypotheses, we found no effect of allochthony on production at the community and the species levels. The high-frequency seasonal sampling (time-for-space) allowed for estimating the efficiency of zooplankton in converting this external carbon source to growth. From the daily t-OM inputs in the lake (57-3,027 kg C/d), the zooplankton community transferred 0.2% into biomass (0.01-2.36 kg C/d); this level was of the same magnitude as the carbon transfer efficiency for algal-derived carbon (0.4%). In the context of the boundless carbon cycle, which integrates inland waters as a biologically active component of the terrestrial landscape, the use of the time-for-space approach for the quantifying of t-OM trophic transfer efficiency by zooplankton is a critical step toward a better understanding of the effects of increasing external carbon fluxes on pelagic food webs.

Increased incorporation of terrestrial organic matter (t-OM) into consumer biomass (allochthony) is believed to reduce growth capacity. In this study, we examined the relationship between crustacean zooplankton allochthony and production in a boreal lake that displays strong seasonal variability in t-OM inputs. Contrary to our hypotheses, we found no effect of allochthony on production at the community and the species levels. The high-frequency seasonal sampling (time-for-space) allowed for estimating the efficiency of zooplankton in converting this external carbon source to growth. From the daily t-OM inputs in the lake (57-3,027 kg C/d), the zooplankton community transferred 0.2% into biomass (0.01-2.36 kg C/d); this level was of the same magnitude as the carbon transfer efficiency for algal-derived carbon (0.4%). In the context of the boundless carbon cycle, which integrates inland waters as a biologically active component of the terrestrial landscape, the use of the time-for-space approach for the quantifying of t-OM trophic transfer efficiency by zooplankton is a critical step toward a better understanding of the effects of increasing external carbon fluxes on pelagic food webs.

Les sols gelés en permanence du paysage circumpolaire constituent l’un des plus grands gisements de carbone organique sur Terre. Le réchauffement climatique et le dégel du pergélisol qu’il entraîne ont accru le risque qu'une grande partie de ce carbone soit libérée dans l'atmosphère sous forme de gaz à effet de serre, notamment sous forme de méthane depuis les nombreux écosystèmes aquatiques présents dans les régions subarctiques et arctiques. Ce scénario a attiré l'attention de la communauté scientifique sur le cycle du carbone dans les écosystèmes circumpolaires. Cependant, les changements induits par ces apports croissants de matière terrestre sur le réservoir de carbone organique et sur le réseau alimentaire des lacs et des étangs nordiques ont été peu étudiés. Ce projet de thèse vise à explorer l'influence du dégel du pergélisol sur les lacs de haute latitude. Premièrement, nous avons évalué les effets du dégel du pergélisol sur la matière organique dissoute (MOD) par des analyses optiques de 253 étangs couvrant 200 degrés de longitude à travers l’Arctique. Pour un sous-échantillon de dix plans d’eau subarctiques, nous avons également quantifié la contribution terrestre à la MOD en utilisant l’approche des isotopes stables. Dans un second temps, en mesurant la concentration en nutriments et en chlorophylle a, et en utilisant des approches basées sur les acides gras et les isotopes stables, nous avons étudié l’influence du dégel du pergélisol sur les producteurs et les consommateurs primaires de la chaîne alimentaire planctonique au sein de huit étangs subarctiques impactés différemment par les apports terrestres venant du bassin versant. Enfin, nous avons exploré la communauté et la biomasse de zooplancton dans huit étangs de dégel subarctiques, ainsi que la manière avec laquelle la stratification thermique et les variables environnementales associées déterminent la distribution verticale du zooplancton dans ces mares arctiques fortement affectées par le dégel

Stream ecological theory predicts that the use of allochthonous resources declines with increasing channel width, while at the same time primary production and autochthonous carbon use by consumers increase. Although these expectations have found support in several studies, it is not well known how terrestrial runoff and/or inputs of primary production from lakes alter these longitudinal patterns. To investigate this, we analyzed the diet of filter-feeding black fly and caddisfly larvae from 23 boreal streams, encompassing gradients in drainage area, land cover and land use, and distance to nearest upstream lake outlet. In five of these streams, we also sampled repeatedly during autumn to test if allochthony of filter feeders increases over time as new litter inputs are processed. Across sites, filter-feeder autochthony was 21.1-75.1%, did not differ between black fly and caddisfly larvae, was not positively related to drainage area, and did not decrease with distance from lakes. Instead, lake and wetland cover promoted filter-feeder autochthony independently of stream size, whereas catchment-scale forest cover and forestry reduced autochthony. Further, we found no seasonal increase in allochthony, indicating low assimilation of particles derived from autumn litter fall. Hence, catchment properties, rather than local conditions, can influence levels of autochthony in boreal streams.

Stream ecological theory predicts that the use of allochthonous resources declines with increasing channel width, while at the same time primary production and autochthonous carbon use by consumers increase. Although these expectations have found support in several studies, it is not well known how terrestrial runoff and/or inputs of primary production from lakes alter these longitudinal patterns. To investigate this, we analyzed the diet of filter-feeding black fly and caddisfly larvae from 23 boreal streams, encompassing gradients in drainage area, land cover and land use, and distance to nearest upstream lake outlet. In five of these streams, we also sampled repeatedly during autumn to test if allochthony of filter feeders increases over time as new litter inputs are processed. Across sites, filter-feeder autochthony was 21.1-75.1%, did not differ between black fly and caddisfly larvae, was not positively related to drainage area, and did not decrease with distance from lakes. Instead, lake and wetland cover promoted filter-feeder autochthony independently of stream size, whereas catchment-scale forest cover and forestry reduced autochthony. Further, we found no seasonal increase in allochthony, indicating low assimilation of particles derived from autumn litter fall. Hence, catchment properties, rather than local conditions, can influence levels of autochthony in boreal streams.

Stream ecological theory predicts that the use of allochthonous resources declines with increasing channel width, while at the same time primary production and autochthonous carbon use by consumers increase. Although these expectations have found support in several studies, it is not well known how terrestrial runoff and/or inputs of primary production from lakes alter these longitudinal patterns. To investigate this, we analyzed the diet of filter-feeding black fly and caddisfly larvae from 23 boreal streams, encompassing gradients in drainage area, land cover and land use, and distance to nearest upstream lake outlet. In five of these streams, we also sampled repeatedly during autumn to test if allochthony of filter feeders increases over time as new litter inputs are processed. Across sites, filter-feeder autochthony was 21.1-75.1%, did not differ between black fly and caddisfly larvae, was not positively related to drainage area, and did not decrease with distance from lakes. Instead, lake and wetland cover promoted filter-feeder autochthony independently of stream size, whereas catchment-scale forest cover and forestry reduced autochthony. Further, we found no seasonal increase in allochthony, indicating low assimilation of particles derived from autumn litter fall. Hence, catchment properties, rather than local conditions, can influence levels of autochthony in boreal streams.

Stream ecological theory predicts that the use of allochthonous resources declines with increasing channel width, while at the same time primary production and autochthonous carbon use by consumers increase. Although these expectations have found support in several studies, it is not well known how terrestrial runoff and/or inputs of primary production from lakes alter these longitudinal patterns. To investigate this, we analyzed the diet of filter-feeding black fly and caddisfly larvae from 23 boreal streams, encompassing gradients in drainage area, land cover and land use, and distance to nearest upstream lake outlet. In five of these streams, we also sampled repeatedly during autumn to test if allochthony of filter feeders increases over time as new litter inputs are processed. Across sites, filter-feeder autochthony was 21.1-75.1%, did not differ between black fly and caddisfly larvae, was not positively related to drainage area, and did not decrease with distance from lakes. Instead, lake and wetland cover promoted filter-feeder autochthony independently of stream size, whereas catchment-scale forest cover and forestry reduced autochthony. Further, we found no seasonal increase in allochthony, indicating low assimilation of particles derived from autumn litter fall. Hence, catchment properties, rather than local conditions, can influence levels of autochthony in boreal streams.

Stream ecological theory predicts that the use of allochthonous resources declines with increasing channel width, while at the same time primary production and autochthonous carbon use by consumers increase. Although these expectations have found support in several studies, it is not well known how terrestrial runoff and/or inputs of primary production from lakes alter these longitudinal patterns. To investigate this, we analyzed the diet of filter-feeding black fly and caddisfly larvae from 23 boreal streams, encompassing gradients in drainage area, land cover and land use, and distance to nearest upstream lake outlet. In five of these streams, we also sampled repeatedly during autumn to test if allochthony of filter feeders increases over time as new litter inputs are processed. Across sites, filter-feeder autochthony was 21.1-75.1%, did not differ between black fly and caddisfly larvae, was not positively related to drainage area, and did not decrease with distance from lakes. Instead, lake and wetland cover promoted filter-feeder autochthony independently of stream size, whereas catchment-scale forest cover and forestry reduced autochthony. Further, we found no seasonal increase in allochthony, indicating low assimilation of particles derived from autumn litter fall. Hence, catchment properties, rather than local conditions, can influence levels of autochthony in boreal streams.

This thesis is structured in 3 chapters, the 1st chapter explores the link between crustacean zooplankton biomass from terrestrial origin (i.e. allochthony) using stable isotopes and the production of crustacean zooplankton community. This chapter is the result of a collaborative work between my supervisor Dr. Milla Rautio, my co-supervisor Dr. Paul del Giorgio, his PhD student Dr. Dominic Vachon and I. DV provided the gross primary production and river flow data. I carried out the sampling, data and statistical analysis as well as zooplankton identification and production calculations. I wrote the article together with MR while DV revised the final version. PdG will provide comments before submitting the paper to a journal. The second chapter uses fatty acid analyses, a complementary method to stable isotopes to study lipid reserves of the same zooplankton community. It allows a better understanding of how life history strategies influence the building of lipid reserves and how different food sources (phytoplankton, terrestrial organic matter, bacteria) are used in zooplankton life cycle and winter survival. This study has been possible thanks to the collaborative effort of Dr. M. Rautio and her post-doc fellow Dr. Heather Mariash who carried out the survival experiment, as well as MR’s PhD student Dr. Tobias Schneider who provided some of the seston fatty acid data. I designed the study with my supervisor’s help, carried out the sampling, lab work, data and statistical analysis. I wrote the manuscript with MR. All authors participated to the manuscript revision that is now submitted to Scientific Reports (February 2017). The third chapter looked at the spatial distribution of the allochthony in the most abundant copepod, Leptodiaptomus minutus in Lake Simoncouche and explained it ecologically with the carbon source distribution. This chapter has been published in Freshwater Biology (March 2017) thanks to the collaboration of Dr. M Rautio, Dr. P. del Giorgio and I.

Increasing input of terrestrial dissolved organic carbon (DOC) has been identified as a widespread environmental phenomenon in many aquatic ecosystems. Terrestrial DOC influences basal trophic levels: it can subsidize pelagic bacterial production and impede benthic primary production via light attenuation. However, little is known about the impacts of elevated DOC concentrations on higher trophic levels, especially on top consumers. Here, we used Eurasian perch (Perca fluviatilis) to investigate the effects of increasing DOC concentrations on top predator populations. We applied stable isotope analysis and geometric morphometrics to estimate long-term resource and habitat utilization of perch. Habitat coupling, the ability to exploit littoral and pelagic resources, strongly decreased with increasing DOC concentrations due to a shift toward feeding predominantly on pelagic resources. Simultaneously, resource use and body morphology became increasingly alike for littoral and pelagic perch populations with increasing DOC, suggesting more intense competition in lakes with high DOC. Eye size of perch increased with increasing DOC concentrations, likely as a result of deteriorating visual conditions, suggesting a sensory response to environmental change. Increasing input of DOC to aquatic ecosystems is a common result of environmental change and might affect top predator populations in multiple and complex ways.

Increasing input of terrestrial dissolved organic carbon (DOC) has been identified as a widespread environmental phenomenon in many aquatic ecosystems. Terrestrial DOC influences basal trophic levels: it can subsidize pelagic bacterial production and impede benthic primary production via light attenuation. However, little is known about the impacts of elevated DOC concentrations on higher trophic levels, especially on top consumers. Here, we used Eurasian perch (Perca fluviatilis) to investigate the effects of increasing DOC concentrations on top predator populations. We applied stable isotope analysis and geometric morphometrics to estimate long-term resource and habitat utilization of perch. Habitat coupling, the ability to exploit littoral and pelagic resources, strongly decreased with increasing DOC concentrations due to a shift toward feeding predominantly on pelagic resources. Simultaneously, resource use and body morphology became increasingly alike for littoral and pelagic perch populations with increasing DOC, suggesting more intense competition in lakes with high DOC. Eye size of perch increased with increasing DOC concentrations, likely as a result of deteriorating visual conditions, suggesting a sensory response to environmental change. Increasing input of DOC to aquatic ecosystems is a common result of environmental change and might affect top predator populations in multiple and complex ways.

1. The zooplankton is a key link in the transfer of energy from primary producers up through aquatic food webs. Previous efforts to quantify the importance of basal resources to aquatic consumers have used stable isotopes (SI) and simple ternary models, including only 'bulk' phytoplankton, bacteria or terrestrial particulate organic matter (t-POM). 2. We used a novel Bayesian mixing model based on fatty acids (FA) to quantify the dietary assimilation of seven basal resources, including five phytoplankton groups, pelagic bacteria and t-POM, to Cladocera in large boreal lakes in Finland. To account for trophic enrichment of FA from the diet to consumers, we parameterised the model with a resource library, from many feeding trials, consisting of Daphnia magna fed 22 diverse basal taxa. 3. The results of the feeding trials show that the distinctive FA profiles of algal groups are transferred to consumers. Moreover, the large number of FA variables (n = 22) used in the model avoids the limitations of underdetermined mixing problems, common to SI modelling, in cases when the number of resources outnumbers the tracer variables. 4. We show that cladocerans were generally supported by phytoplankton (86-94%), with little use of t-POM (1-9%) and bacteria (1-3%). Cladocerans used primarily high-quality phytoplankton (cryptophytes, diatoms and dinoflagellates) in both summer (51 +/- 22%) and autumn (79 +/- 12%), and the relative importance of medium-quality resources (cyanobacteria, chlorophytes and chrysophytes) declined from 37 +/- 23% in the summer to 8 +/- 2% in the autumn. 5. High-quality resources, rich in essential biochemical compounds, are critical in fuelling food webs in large lakes, even those with high concentrations of allochthonous organic matter., AuthorCount:7

Ecology Letters (2010) Abstract Carbon of terrestrial origin often makes up a significant share of consumer biomass in unproductive lake ecosystems. However, the mechanisms for terrestrial support of lake secondary production are largely unclear. By using a modelling approach, we show that terrestrial export of dissolved labile low molecular weight carbon (LMWC) compounds supported 80% (34-95%), 54% (19-90%) and 23% (7-45%) of the secondary production by bacteria, protozoa and metazoa, respectively, in a 7-km(2) boreal lake (conservative to liberal estimates in brackets). Bacterial growth on LMWC was of similar magnitude as that of primary production (PP), and grazing on bacteria effectively channelled the LMWC carbon to higher trophic levels. We suggest that rapid turnover of forest LMWC pools enables continuous export of fresh photosynthates and other labile metabolites to aquatic systems, and that substantial transfer of LMWC from terrestrial sources to lake consumers can occur within a few days. Sequestration of LMWC of terrestrial origin, thus, helps explain high shares of terrestrial carbon in lake organisms and implies that lake food webs can be closely dependent on recent terrestrial PP.