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7. Imaging outcome measures of neuroprotection and repair in MS: A consensus statement from NAIMS.

Author

Oh, Jiwon, Oh, Jiwon, Ontaneda, Daniel, Azevedo, Christina, Klawiter, Eric C, Absinta, Martina, Arnold, Douglas L, Bakshi, Rohit, Calabresi, Peter A, Crainiceanu, Ciprian, Dewey, Blake, Freeman, Leorah, Gauthier, Susan, Henry, Roland, Inglese, Mathilde, Kolind, Shannon, Li, David KB, Mainero, Caterina, Menon, Ravi S, Nair, Govind, Narayanan, Sridar, Nelson, Flavia, Pelletier, Daniel, Rauscher, Alexander, Rooney, William, Sati, Pascal, Schwartz, Daniel, Shinohara, Russell T, Tagge, Ian, Traboulsee, Anthony, Wang, Yi, Yoo, Youngjin, Yousry, Tarek, Zhang, Yunyan, Sicotte, Nancy L, Reich, Daniel S, North American Imaging in Multiple Sclerosis Cooperative, Oh, Jiwon, Oh, Jiwon, Ontaneda, Daniel, Azevedo, Christina, Klawiter, Eric C, Absinta, Martina, Arnold, Douglas L, Bakshi, Rohit, Calabresi, Peter A, Crainiceanu, Ciprian, Dewey, Blake, Freeman, Leorah, Gauthier, Susan, Henry, Roland, Inglese, Mathilde, Kolind, Shannon, Li, David KB, Mainero, Caterina, Menon, Ravi S, Nair, Govind, Narayanan, Sridar, Nelson, Flavia, Pelletier, Daniel, Rauscher, Alexander, Rooney, William, Sati, Pascal, Schwartz, Daniel, Shinohara, Russell T, Tagge, Ian, Traboulsee, Anthony, Wang, Yi, Yoo, Youngjin, Yousry, Tarek, Zhang, Yunyan, Sicotte, Nancy L, Reich, Daniel S, and North American Imaging in Multiple Sclerosis Cooperative

Abstract

ObjectiveTo summarize current and emerging imaging techniques that can be used to assess neuroprotection and repair in multiple sclerosis (MS), and to provide a consensus opinion on the potential utility of each technique in clinical trial settings.MethodsClinicians and scientists with expertise in the use of MRI in MS convened in Toronto, Canada, in November 2016 at a North American Imaging in Multiple Sclerosis (NAIMS) Cooperative workshop meeting. The discussion was compiled into a manuscript and circulated to all NAIMS members in attendance. Edits and feedback were incorporated until all authors were in agreement.ResultsA wide spectrum of imaging techniques and analysis methods in the context of specific study designs were discussed, with a focus on the utility and limitations of applying each technique to assess neuroprotection and repair. Techniques were discussed under specific themes, and included conventional imaging, magnetization transfer ratio, diffusion tensor imaging, susceptibility-weighted imaging, imaging cortical lesions, magnetic resonance spectroscopy, PET, advanced diffusion imaging, sodium imaging, multimodal techniques, imaging of special regions, statistical considerations, and study design.ConclusionsImaging biomarkers of neuroprotection and repair are an unmet need in MS. There are a number of promising techniques with different strengths and limitations, and selection of a specific technique will depend on a number of factors, notably the question the trial seeks to answer. Ongoing collaborative efforts will enable further refinement and improved methods to image the effect of novel therapeutic agents that exert benefit in MS predominately through neuroprotective and reparative mechanisms.

Published
2019

8. An Open Resource for Non-human Primate Imaging.

Author

Milham, Michael P, Milham, Michael P, Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G, Blezer, Erwin LA, Brochier, Thomas, Chen, Aihua, Croxson, Paula L, Damatac, Christienne G, Dehaene, Stanislas, Everling, Stefan, Fair, Damian A, Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D, Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P Christiaan, Kwok, Sze Chai, Laland, Kevin N, Leopold, David A, Lindenfors, Patrik, Mars, Rogier B, Menon, Ravi S, Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H, Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I, Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M, Roelfsema, Pieter R, Rudko, David A, Rushworth, Matthew FS, Russ, Brian E, Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M, Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L, Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S, Tsao, Doris, Wang, Zheng, Wilson, Charles RE, Yacoub, Essa, Ye, Frank Q, Zarco, Wilbert, Zhou, Yong-di, Margulies, Daniel S, Schroeder, Charles E, Milham, Michael P, Milham, Michael P, Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G, Blezer, Erwin LA, Brochier, Thomas, Chen, Aihua, Croxson, Paula L, Damatac, Christienne G, Dehaene, Stanislas, Everling, Stefan, Fair, Damian A, Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D, Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P Christiaan, Kwok, Sze Chai, Laland, Kevin N, Leopold, David A, Lindenfors, Patrik, Mars, Rogier B, Menon, Ravi S, Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H, Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I, Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M, Roelfsema, Pieter R, Rudko, David A, Rushworth, Matthew FS, Russ, Brian E, Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M, Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L, Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S, Tsao, Doris, Wang, Zheng, Wilson, Charles RE, Yacoub, Essa, Ye, Frank Q, Zarco, Wilbert, Zhou, Yong-di, Margulies, Daniel S, and Schroeder, Charles E

Abstract

Non-human primate neuroimaging is a rapidly growing area of research that promises to transform and scale translational and cross-species comparative neuroscience. Unfortunately, the technological and methodological advances of the past two decades have outpaced the accrual of data, which is particularly challenging given the relatively few centers that have the necessary facilities and capabilities. The PRIMatE Data Exchange (PRIME-DE) addresses this challenge by aggregating independently acquired non-human primate magnetic resonance imaging (MRI) datasets and openly sharing them via the International Neuroimaging Data-sharing Initiative (INDI). Here, we present the rationale, design, and procedures for the PRIME-DE consortium, as well as the initial release, consisting of 25 independent data collections aggregated across 22 sites (total = 217 non-human primates). We also outline the unique pitfalls and challenges that should be considered in the analysis of non-human primate MRI datasets, including providing automated quality assessment of the contributed datasets.

Published
2018

9. An Open Resource for Non-human Primate Imaging

Author

Milham, Michael P., Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G., Blezer, Erwin L.A., Brochier, Thomas, Chen, Aihua, Croxson, Paula L., Damatac, Christienne G., Dehaene, Stanislas, Everling, Stefan, Fair, Damian A., Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D., Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P. Christiaan, Kwok, Sze Chai, Laland, Kevin N., Leopold, David A., Lindenfors, Patrik, Mars, Rogier B., Menon, Ravi S., Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H., Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I., Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M., Roelfsema, Pieter R., Rudko, David A., Rushworth, Matthew F.S., Russ, Brian E., Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M., Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L., Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S., Tsao, Doris, Wang, Zheng, Wilson, Charles R.E., Yacoub, Essa, Ye, Frank Q., Zarco, Wilbert, Zhou, Yong di, Margulies, Daniel S., Schroeder, Charles E., Milham, Michael P., Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G., Blezer, Erwin L.A., Brochier, Thomas, Chen, Aihua, Croxson, Paula L., Damatac, Christienne G., Dehaene, Stanislas, Everling, Stefan, Fair, Damian A., Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D., Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P. Christiaan, Kwok, Sze Chai, Laland, Kevin N., Leopold, David A., Lindenfors, Patrik, Mars, Rogier B., Menon, Ravi S., Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H., Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I., Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M., Roelfsema, Pieter R., Rudko, David A., Rushworth, Matthew F.S., Russ, Brian E., Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M., Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L., Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S., Tsao, Doris, Wang, Zheng, Wilson, Charles R.E., Yacoub, Essa, Ye, Frank Q., Zarco, Wilbert, Zhou, Yong di, Margulies, Daniel S., and Schroeder, Charles E.

Published
2018

10. An Open Resource for Non-human Primate Imaging

Author

Milham, Michael P., Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Celine, Balezeau, Fabien, Baxter, Mark G., Blezer, Erwin L. A., Brochier, Thomas, Chen, Aihua, Croxson, Paula L., Damatac, Christienne G., Dehaene, Stanislas, Everling, Stefan, Fair, Damian A., Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D., Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P. Christiaan, Kwok, Sze Chai, Laland, Kevin N., Leopold, David A., Lindenfors, Patrik, Mars, Rogier B., Menon, Ravi S., Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H., Nacef, Jennifer, Nagy, Jamie, Ortiz Rios, Michael, Petkov, Christopher, Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M., Roelfsema, Pieter R., Rudko, David A., Rushworth, Matthew F. S., Russ, Brian E., Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M., Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L., Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S., Tsao, Doris, Wang, Zheng, Wilson, Charles R. E., Yacoub, Essa, Ye, Frank Q., Zarco, Wilbert, Zhou, Yong-di, Margulies, Daniel S., Schroeder, Charles E., Milham, Michael P., Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Celine, Balezeau, Fabien, Baxter, Mark G., Blezer, Erwin L. A., Brochier, Thomas, Chen, Aihua, Croxson, Paula L., Damatac, Christienne G., Dehaene, Stanislas, Everling, Stefan, Fair, Damian A., Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D., Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P. Christiaan, Kwok, Sze Chai, Laland, Kevin N., Leopold, David A., Lindenfors, Patrik, Mars, Rogier B., Menon, Ravi S., Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H., Nacef, Jennifer, Nagy, Jamie, Ortiz Rios, Michael, Petkov, Christopher, Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M., Roelfsema, Pieter R., Rudko, David A., Rushworth, Matthew F. S., Russ, Brian E., Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M., Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L., Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S., Tsao, Doris, Wang, Zheng, Wilson, Charles R. E., Yacoub, Essa, Ye, Frank Q., Zarco, Wilbert, Zhou, Yong-di, Margulies, Daniel S., and Schroeder, Charles E.

Abstract

Non-human primate neuroimaging is a rapidly growing area of research that promises to transform and scale translational and cross-species comparative neuroscience. Unfortunately, the technological and methodological advances of the past two decades have outpaced the accrual of data, which is particularly challenging given the relatively few centers that have the necessary facilities and capabilities. The PRIMatE Data Exchange (PRIME-DE) addresses this challenge by aggregating independently acquired non-human primate magnetic resonance imaging (MRI) datasets and openly sharing them via the International Neuroimaging Data-sharing Initiative (INDI). Here, we present the rationale, design, and procedures for the PRIME-DE consortium, as well as the initial release, consisting of 25 independent data collections aggregated across 22 sites (total = 217 non-human primates). We also outline the unique pitfalls and challenges that should be considered in the analysis of non-human primate MRI datasets, including providing automated quality assessment of the contributed datasets.

Published
2018
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11. An Open Resource for Non-human Primate Imaging

Author

Milham, Michael P., Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G., Blezer, Erwin L.A., Brochier, Thomas, Chen, Aihua, Croxson, Paula L., Damatac, Christienne G., Dehaene, Stanislas, Everling, Stefan, Fair, Damian A., Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D., Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P. Christiaan, Kwok, Sze Chai, Laland, Kevin N., Leopold, David A., Lindenfors, Patrik, Mars, Rogier B., Menon, Ravi S., Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H., Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I., Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M., Roelfsema, Pieter R., Rudko, David A., Rushworth, Matthew F.S., Russ, Brian E., Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M., Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L., Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S., Tsao, Doris, Wang, Zheng, Wilson, Charles R.E., Yacoub, Essa, Ye, Frank Q., Zarco, Wilbert, Zhou, Yong di, Margulies, Daniel S., Schroeder, Charles E., Milham, Michael P., Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G., Blezer, Erwin L.A., Brochier, Thomas, Chen, Aihua, Croxson, Paula L., Damatac, Christienne G., Dehaene, Stanislas, Everling, Stefan, Fair, Damian A., Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D., Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P. Christiaan, Kwok, Sze Chai, Laland, Kevin N., Leopold, David A., Lindenfors, Patrik, Mars, Rogier B., Menon, Ravi S., Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H., Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I., Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M., Roelfsema, Pieter R., Rudko, David A., Rushworth, Matthew F.S., Russ, Brian E., Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M., Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L., Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S., Tsao, Doris, Wang, Zheng, Wilson, Charles R.E., Yacoub, Essa, Ye, Frank Q., Zarco, Wilbert, Zhou, Yong di, Margulies, Daniel S., and Schroeder, Charles E.

Published
2018

12. An Open Resource for Non-human Primate Imaging

Author

Milham, Michael P, Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G, Blezer, Erwin L A, Brochier, Thomas, Chen, Aihua, Croxson, Paula L, Damatac, Christienne G, Dehaene, Stanislas, Everling, Stefan, Fair, Damian A, Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D, Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P Christiaan, Kwok, Sze Chai, Laland, Kevin N, Leopold, David A, Lindenfors, Patrik, Mars, Rogier B, Menon, Ravi S, Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H, Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I, Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M, Roelfsema, Pieter R, Rudko, David A, Rushworth, Matthew F S, Russ, Brian E, Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M, Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L, Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S, Tsao, Doris, Wang, Zheng, Wilson, Charles R E, Yacoub, Essa, Ye, Frank Q, Zarco, Wilbert, Zhou, Yong-di, Margulies, Daniel S, Schroeder, Charles E, Milham, Michael P, Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G, Blezer, Erwin L A, Brochier, Thomas, Chen, Aihua, Croxson, Paula L, Damatac, Christienne G, Dehaene, Stanislas, Everling, Stefan, Fair, Damian A, Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D, Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P Christiaan, Kwok, Sze Chai, Laland, Kevin N, Leopold, David A, Lindenfors, Patrik, Mars, Rogier B, Menon, Ravi S, Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H, Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I, Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M, Roelfsema, Pieter R, Rudko, David A, Rushworth, Matthew F S, Russ, Brian E, Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M, Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L, Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S, Tsao, Doris, Wang, Zheng, Wilson, Charles R E, Yacoub, Essa, Ye, Frank Q, Zarco, Wilbert, Zhou, Yong-di, Margulies, Daniel S, and Schroeder, Charles E

Abstract

Non-human primate neuroimaging is a rapidly growing area of research that promises to transform and scale translational and cross-species comparative neuroscience. Unfortunately, the technological and methodological advances of the past two decades have outpaced the accrual of data, which is particularly challenging given the relatively few centers that have the necessary facilities and capabilities. The PRIMatE Data Exchange (PRIME-DE) addresses this challenge by aggregating independently acquired non-human primate magnetic resonance imaging (MRI) datasets and openly sharing them via the International Neuroimaging Data-sharing Initiative (INDI). Here, we present the rationale, design, and procedures for the PRIME-DE consortium, as well as the initial release, consisting of 25 independent data collections aggregated across 22 sites (total = 217 non-human primates). We also outline the unique pitfalls and challenges that should be considered in the analysis of non-human primate MRI datasets, including providing automated quality assessment of the contributed datasets.

Published
2018

13. An Open Resource for Non-human Primate Imaging.

Author

Milham, Michael P, Milham, Michael P, Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G, Blezer, Erwin LA, Brochier, Thomas, Chen, Aihua, Croxson, Paula L, Damatac, Christienne G, Dehaene, Stanislas, Everling, Stefan, Fair, Damian A, Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D, Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P Christiaan, Kwok, Sze Chai, Laland, Kevin N, Leopold, David A, Lindenfors, Patrik, Mars, Rogier B, Menon, Ravi S, Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H, Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I, Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M, Roelfsema, Pieter R, Rudko, David A, Rushworth, Matthew FS, Russ, Brian E, Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M, Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L, Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S, Tsao, Doris, Wang, Zheng, Wilson, Charles RE, Yacoub, Essa, Ye, Frank Q, Zarco, Wilbert, Zhou, Yong-di, Margulies, Daniel S, Schroeder, Charles E, Milham, Michael P, Milham, Michael P, Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G, Blezer, Erwin LA, Brochier, Thomas, Chen, Aihua, Croxson, Paula L, Damatac, Christienne G, Dehaene, Stanislas, Everling, Stefan, Fair, Damian A, Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D, Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P Christiaan, Kwok, Sze Chai, Laland, Kevin N, Leopold, David A, Lindenfors, Patrik, Mars, Rogier B, Menon, Ravi S, Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H, Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I, Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M, Roelfsema, Pieter R, Rudko, David A, Rushworth, Matthew FS, Russ, Brian E, Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M, Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L, Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S, Tsao, Doris, Wang, Zheng, Wilson, Charles RE, Yacoub, Essa, Ye, Frank Q, Zarco, Wilbert, Zhou, Yong-di, Margulies, Daniel S, and Schroeder, Charles E

Abstract

Non-human primate neuroimaging is a rapidly growing area of research that promises to transform and scale translational and cross-species comparative neuroscience. Unfortunately, the technological and methodological advances of the past two decades have outpaced the accrual of data, which is particularly challenging given the relatively few centers that have the necessary facilities and capabilities. The PRIMatE Data Exchange (PRIME-DE) addresses this challenge by aggregating independently acquired non-human primate magnetic resonance imaging (MRI) datasets and openly sharing them via the International Neuroimaging Data-sharing Initiative (INDI). Here, we present the rationale, design, and procedures for the PRIME-DE consortium, as well as the initial release, consisting of 25 independent data collections aggregated across 22 sites (total = 217 non-human primates). We also outline the unique pitfalls and challenges that should be considered in the analysis of non-human primate MRI datasets, including providing automated quality assessment of the contributed datasets.

Published
2018

14. An Open Resource for Non-human Primate Imaging

Author

Milham, Michael P., Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G., Blezer, Erwin L.A., Brochier, Thomas, Chen, Aihua, Croxson, Paula L., Damatac, Christienne G., Dehaene, Stanislas, Everling, Stefan, Fair, Damian A., Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D., Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P. Christiaan, Kwok, Sze Chai, Laland, Kevin N., Leopold, David A., Lindenfors, Patrik, Mars, Rogier B., Menon, Ravi S., Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H., Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I., Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M., Roelfsema, Pieter R., Rudko, David A., Rushworth, Matthew F.S., Russ, Brian E., Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M., Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L., Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S., Tsao, Doris, Wang, Zheng, Wilson, Charles R.E., Yacoub, Essa, Ye, Frank Q., Zarco, Wilbert, Zhou, Yong di, Margulies, Daniel S., Schroeder, Charles E., Milham, Michael P., Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G., Blezer, Erwin L.A., Brochier, Thomas, Chen, Aihua, Croxson, Paula L., Damatac, Christienne G., Dehaene, Stanislas, Everling, Stefan, Fair, Damian A., Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D., Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P. Christiaan, Kwok, Sze Chai, Laland, Kevin N., Leopold, David A., Lindenfors, Patrik, Mars, Rogier B., Menon, Ravi S., Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H., Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I., Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M., Roelfsema, Pieter R., Rudko, David A., Rushworth, Matthew F.S., Russ, Brian E., Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M., Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L., Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S., Tsao, Doris, Wang, Zheng, Wilson, Charles R.E., Yacoub, Essa, Ye, Frank Q., Zarco, Wilbert, Zhou, Yong di, Margulies, Daniel S., and Schroeder, Charles E.

Published
2018

15. An Open Resource for Non-human Primate Imaging

Author

In Vivo NMR ISI, Brain, Milham, Michael P., Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G., Blezer, Erwin L.A., Brochier, Thomas, Chen, Aihua, Croxson, Paula L., Damatac, Christienne G., Dehaene, Stanislas, Everling, Stefan, Fair, Damian A., Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D., Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P. Christiaan, Kwok, Sze Chai, Laland, Kevin N., Leopold, David A., Lindenfors, Patrik, Mars, Rogier B., Menon, Ravi S., Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H., Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I., Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M., Roelfsema, Pieter R., Rudko, David A., Rushworth, Matthew F.S., Russ, Brian E., Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M., Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L., Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S., Tsao, Doris, Wang, Zheng, Wilson, Charles R.E., Yacoub, Essa, Ye, Frank Q., Zarco, Wilbert, Zhou, Yong di, Margulies, Daniel S., Schroeder, Charles E., In Vivo NMR ISI, Brain, Milham, Michael P., Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G., Blezer, Erwin L.A., Brochier, Thomas, Chen, Aihua, Croxson, Paula L., Damatac, Christienne G., Dehaene, Stanislas, Everling, Stefan, Fair, Damian A., Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D., Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P. Christiaan, Kwok, Sze Chai, Laland, Kevin N., Leopold, David A., Lindenfors, Patrik, Mars, Rogier B., Menon, Ravi S., Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H., Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I., Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M., Roelfsema, Pieter R., Rudko, David A., Rushworth, Matthew F.S., Russ, Brian E., Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M., Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L., Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S., Tsao, Doris, Wang, Zheng, Wilson, Charles R.E., Yacoub, Essa, Ye, Frank Q., Zarco, Wilbert, Zhou, Yong di, Margulies, Daniel S., and Schroeder, Charles E.

Published
2018

16. An Open Resource for Non-human Primate Imaging

Author

Milham, Michael P, Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G, Blezer, Erwin L A, Brochier, Thomas, Chen, Aihua, Croxson, Paula L, Damatac, Christienne G, Dehaene, Stanislas, Everling, Stefan, Fair, Damian A, Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D, Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P Christiaan, Kwok, Sze Chai, Laland, Kevin N, Leopold, David A, Lindenfors, Patrik, Mars, Rogier B, Menon, Ravi S, Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H, Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I, Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M, Roelfsema, Pieter R, Rudko, David A, Rushworth, Matthew F S, Russ, Brian E, Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M, Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L, Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S, Tsao, Doris, Wang, Zheng, Wilson, Charles R E, Yacoub, Essa, Ye, Frank Q, Zarco, Wilbert, Zhou, Yong-di, Margulies, Daniel S, Schroeder, Charles E, Milham, Michael P, Ai, Lei, Koo, Bonhwang, Xu, Ting, Amiez, Céline, Balezeau, Fabien, Baxter, Mark G, Blezer, Erwin L A, Brochier, Thomas, Chen, Aihua, Croxson, Paula L, Damatac, Christienne G, Dehaene, Stanislas, Everling, Stefan, Fair, Damian A, Fleysher, Lazar, Freiwald, Winrich, Froudist-Walsh, Sean, Griffiths, Timothy D, Guedj, Carole, Hadj-Bouziane, Fadila, Ben Hamed, Suliann, Harel, Noam, Hiba, Bassem, Jarraya, Bechir, Jung, Benjamin, Kastner, Sabine, Klink, P Christiaan, Kwok, Sze Chai, Laland, Kevin N, Leopold, David A, Lindenfors, Patrik, Mars, Rogier B, Menon, Ravi S, Messinger, Adam, Meunier, Martine, Mok, Kelvin, Morrison, John H, Nacef, Jennifer, Nagy, Jamie, Rios, Michael Ortiz, Petkov, Christopher I, Pinsk, Mark, Poirier, Colline, Procyk, Emmanuel, Rajimehr, Reza, Reader, Simon M, Roelfsema, Pieter R, Rudko, David A, Rushworth, Matthew F S, Russ, Brian E, Sallet, Jerome, Schmid, Michael Christoph, Schwiedrzik, Caspar M, Seidlitz, Jakob, Sein, Julien, Shmuel, Amir, Sullivan, Elinor L, Ungerleider, Leslie, Thiele, Alexander, Todorov, Orlin S, Tsao, Doris, Wang, Zheng, Wilson, Charles R E, Yacoub, Essa, Ye, Frank Q, Zarco, Wilbert, Zhou, Yong-di, Margulies, Daniel S, and Schroeder, Charles E

Abstract

Non-human primate neuroimaging is a rapidly growing area of research that promises to transform and scale translational and cross-species comparative neuroscience. Unfortunately, the technological and methodological advances of the past two decades have outpaced the accrual of data, which is particularly challenging given the relatively few centers that have the necessary facilities and capabilities. The PRIMatE Data Exchange (PRIME-DE) addresses this challenge by aggregating independently acquired non-human primate magnetic resonance imaging (MRI) datasets and openly sharing them via the International Neuroimaging Data-sharing Initiative (INDI). Here, we present the rationale, design, and procedures for the PRIME-DE consortium, as well as the initial release, consisting of 25 independent data collections aggregated across 22 sites (total = 217 non-human primates). We also outline the unique pitfalls and challenges that should be considered in the analysis of non-human primate MRI datasets, including providing automated quality assessment of the contributed datasets.

Published
2018

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