1,802 results on '"Matthew, G."'
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2. Abundances of Neutron-capture Elements in 62 Stars in the Globular Cluster Messier 15
- Author
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Garcia, Jonathan Cabrera, Garcia, Jonathan Cabrera, Sakari, Charli M, Roederer, Ian U, Evans, Donavon W, Silva, Pedro, Mateo, Mario, Song, Ying-Yi, Kremin, Anthony, Bailey, John I, Walker, Matthew G, Garcia, Jonathan Cabrera, Garcia, Jonathan Cabrera, Sakari, Charli M, Roederer, Ian U, Evans, Donavon W, Silva, Pedro, Mateo, Mario, Song, Ying-Yi, Kremin, Anthony, Bailey, John I, and Walker, Matthew G
- Abstract
M15 is a globular cluster with a known spread in neutron-capture elements. This paper presents abundances of neutron-capture elements for 62 stars in M15. Spectra were obtained with the Michigan/Magellan Fiber System spectrograph, covering a wavelength range from ∼4430 to 4630 Å. Spectral lines from Fe i, Fe ii, Sr i, Zr ii, Ba ii, La ii, Ce ii, Nd ii, Sm ii, Eu ii, and Dy ii were measured, enabling classifications and neutron-capture abundance patterns for the stars. Of the 62 targets, 44 are found to be highly Eu-enhanced r-II stars, another 17 are moderately Eu-enhanced r-I stars, and one star is found to have an s-process signature. The neutron-capture patterns indicate that the majority of the stars are consistent with enrichment by the r-process. The 62 target stars are found to show significant star-to-star spreads in Sr, Zr, Ba, La, Ce, Nd, Sm, Eu, and Dy, but no significant spread in Fe. The neutron-capture abundances are further found to have slight correlations with sodium abundances from the literature, unlike what has been previously found; follow-up studies are needed to verify this result. The findings in this paper suggest that the Eu-enhanced stars in M15 were enhanced by the same process, that the nucleosynthetic source of this Eu pollution was the r-process, and that the r-process source occurred as the first generation of cluster stars was forming.
- Published
- 2024
3. Effects of Cannabis Use on Cigarette Smoking Cessation in LGBTQ+ Individuals
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Pang, Raina D, Pang, Raina D, Schuler, Lucy A, Blosnich, John R, Allem, Jon-Patrick, Kirkpatrick, Matthew G, Pang, Raina D, Pang, Raina D, Schuler, Lucy A, Blosnich, John R, Allem, Jon-Patrick, and Kirkpatrick, Matthew G
- Abstract
ObjectiveSexual and gender minority individuals are more likely to use tobacco and cannabis and have lower cigarette cessation. This study examined cannabis use associations with daily cigarettes smoked in sexual and gender minority individuals before and during a quit attempt.MethodParticipants included dual smoking same-sex/gender couples from California that were willing to make a quit attempt (individual n = 205, 68.3% female sex). Participants reported baseline past 30-day cannabis use and number of cigarettes smoked and cannabis use (yes/no) during 35 nightly surveys. Individuals with current cannabis use reported baseline cannabis use and/or nightly survey cannabis use. Multilevel linear models predicted number of cigarettes smoked by cannabis use.ResultsNumber of cigarettes decreased from before to during a quit attempt, but this decrease was smaller in individuals with current cannabis use compared to no current cannabis use (p < .001). In individuals with current cannabis use, number of cigarettes smoked was greater on days with cannabis use (p < .001). Furthermore, cannabis use that day increased overall number of cigarettes in those with relatively high overall cannabis use but only during a quit attempt in those with relatively low cannabis use (Within-Subject Cannabis Use × Between-Subject Cannabis Use × Quit Attempt interaction; p < .001).ConclusionsSexual and gender minority individuals with cannabis and cigarette use may have a harder time quitting smoking than those who do not use cannabis. For those with cannabis use, guidance on not using cannabis during a quit attempt may improve cigarette cessation outcomes. (PsycInfo Database Record (c) 2024 APA, all rights reserved).
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- 2024
4. Widespread exposure to SARS-CoV-2 in wildlife communities
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Goldberg, Amanda R., Langwig, Kate E., Brown, Katherine L., Marano, Jeffrey M., Rai, Pallavi, King, Kelsie M., Sharp, Amanda K., Ceci, Alessandro, Kailing, Christopher D., Kailing, Macy J., Briggs, Russell, Urbano, Matthew G., Roby, Clinton, Brown, Anne M., Weger-Lucarelli, James, Finkielstein, Carla V., Hoyt, Joseph R., Goldberg, Amanda R., Langwig, Kate E., Brown, Katherine L., Marano, Jeffrey M., Rai, Pallavi, King, Kelsie M., Sharp, Amanda K., Ceci, Alessandro, Kailing, Christopher D., Kailing, Macy J., Briggs, Russell, Urbano, Matthew G., Roby, Clinton, Brown, Anne M., Weger-Lucarelli, James, Finkielstein, Carla V., and Hoyt, Joseph R.
- Abstract
Pervasive SARS-CoV-2 infections in humans have led to multiple transmission events to animals. While SARS-CoV-2 has a potential broad wildlife host range, most documented infections have been in captive animals and a single wildlife species, the white-tailed deer. The full extent of SARS-CoV-2 exposure among wildlife communities and the factors that influence wildlife transmission risk remain unknown. We sampled 23 species of wildlife for SARS-CoV-2 and examined the effects of urbanization and human use on seropositivity. Here, we document positive detections of SARS-CoV-2 RNA in six species, including the deer mouse, Virginia opossum, raccoon, groundhog, Eastern cottontail, and Eastern red bat between May 2022–September 2023 across Virginia and Washington, D.C., USA. In addition, we found that sites with high human activity had three times higher seroprevalence than low human-use areas. We obtained SARS-CoV-2 genomic sequences from nine individuals of six species which were assigned to seven Pango lineages of the Omicron variant. The close match to variants circulating in humans at the time suggests at least seven recent human-to-animal transmission events. Our data support that exposure to SARS-CoV-2 has been widespread in wildlife communities and suggests that areas with high human activity may serve as points of contact for cross-species transmission.
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- 2024
5. Phylogenomics and the rise of the angiosperms
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Zuntini, Alexandre R., Carruthers, Tom, Maurin, Olivier, Bailey, Paul C., Leempoel, Kevin, Brewer, Grace E., Epitawalage, Niroshini, Françoso, Elaine, Gallego-Paramo, Berta, McGinnie, Catherine, Negrão, Raquel, Roy, Shyamali R., Simpson, Lalita, Toledo Romero, Eduardo, Barber, Vanessa M. A., Botigué, Laura, Clarkson, James J., Cowan, Robyn S., Dodsworth, Steven, Johnson, Matthew G., Kim, Jan T., Pokorny, Lisa, Wickett, Norman J., Antar, Guilherme M., DeBolt, Lucinda, Gutierrez, Karime, Hendriks, Kasper P., Hoewener, Alina, Hu, Ai-Qun, Joyce, Elizabeth M., Kikuchi, Izai A. B. S., Larridon, Isabel, Larson, Drew A., de Lírio, Elton John, Liu, Jing-Xia, Malakasi, Panagiota, Przelomska, Natalia A. S., Shah, Toral, Viruel, Juan, Allnutt, Theodore R., Ameka, Gabriel K., Andrew, Rose L., Appelhans, Marc S., Arista, Montserrat, Ariza, María Jesús, Arroyo, Juan, Arthan, Watchara, Bachelier, Julien B., Bailey, C. Donovan, Barnes, Helen F., Barrett, Matthew D., Barrett, Russell L., Bayer, Randall J., Bayly, Michael J., Biffin, Ed, Biggs, Nicky, Birch, Joanne L., Bogarín, Diego, Borosova, Renata, Bowles, Alexander M. C., Boyce, Peter C., Bramley, Gemma L. C., Briggs, Marie, Broadhurst, Linda, Brown, Gillian K., Bruhl, Jeremy J., Bruneau, Anne, Buerki, Sven, Burns, Edie, Byrne, Margaret, Cable, Stuart, Calladine, Ainsley, Callmander, Martin W., Cano, Ángela, Cantrill, David J., Cardinal-McTeague, Warren M., Carlsen, Mónica M., Carruthers, Abigail J. A., de Castro Mateo, Alejandra, Chase, Mark W., Chatrou, Lars W., Cheek, Martin, Chen, Shilin, Christenhusz, Maarten J. M., Christin, Pascal-Antoine, Clements, Mark A., Coffey, Skye C., Conran, John G., Cornejo, Xavier, Couvreur, Thomas L. P., Cowie, Ian D., Csiba, Laszlo, Darbyshire, Iain, Davidse, Gerrit, Davies, Nina M. J., Davis, Aaron P., van Dijk, Kor-jent, Downie, Stephen R., Duretto, Marco F., Duvall, Melvin R., Edwards, Sara L., Eggli, Urs, Erkens, Roy H. J., Escudero, Marcial, de la Estrella, Manuel, Fabriani, Federico, Fay, Michael F., Ferreira, Paola de L., Ficinski, Sarah Z., Fowler, Rachael M., Frisby, Sue, Fu, Lin, Fulcher, Tim, Galbany-Casals, Mercè, Gardner, Elliot M., German, Dmitry A., Giaretta, Augusto, Gibernau, Marc, Gillespie, Lynn J., González, Cynthia C., Goyder, David J., Graham, Sean W., Grall, Aurélie, Green, Laura, Gunn, Bee F., Gutiérrez, Diego G., Hackel, Jan, Haevermans, Thomas, Haigh, Anna, Hall, Jocelyn C., Hall, Tony, Harrison, Melissa J., Hatt, Sebastian A., Hidalgo, Oriane, Hodkinson, Trevor R., Holmes, Gareth D., Hopkins, Helen C. F., Jackson, Christopher J., James, Shelley A., Jobson, Richard W., Kadereit, Gudrun, Kahandawala, Imalka M., Kainulainen, Kent, Kato, Masahiro, Kellogg, Elizabeth A., King, Graham J., Klejevskaja, Beata, Klitgaard, Bente B., Klopper, Ronell R., Knapp, Sandra, Koch, Marcus A., Leebens-Mack, James H., Lens, Frederic, Leon, Christine J., Léveillé-Bourret, Étienne, Lewis, Gwilym P., Li, De-Zhu, Li, Lan, Liede-Schumann, Sigrid, Livshultz, Tatyana, Lorence, David, Lu, Meng, Lu-Irving, Patricia, Luber, Jaquelini, Lucas, Eve J., Luján, Manuel, Lum, Mabel, Macfarlane, Terry D., Magdalena, Carlos, Mansano, Vidal F., Masters, Lizo E., Mayo, Simon J., McColl, Kristina, McDonnell, Angela J., McDougall, Andrew E., McLay, Todd G. B., McPherson, Hannah, Meneses, Rosa I., Merckx, Vincent S. F. T., Michelangeli, Fabián A., Mitchell, John D., Monro, Alexandre K., Moore, Michael J., Mueller, Taryn L., Mummenhoff, Klaus, Munzinger, Jérôme, Muriel, Priscilla, Murphy, Daniel J., Nargar, Katharina, Nauheimer, Lars, Nge, Francis J., Nyffeler, Reto, Orejuela, Andrés, Ortiz, Edgardo M., Palazzesi, Luis, Peixoto, Ariane Luna, Pell, Susan K., Pellicer, Jaume, Penneys, Darin S., Perez-Escobar, Oscar A., Persson, Claes, Pignal, Marc, Pillon, Yohan, Pirani, José R., Plunkett, Gregory M., Powell, Robyn F., Prance, Ghillean T., Puglisi, Carmen, Qin, Ming, Rabeler, Richard K., Rees, Paul E. J., Renner, Matthew, Roalson, Eric H., Rodda, Michele, Rogers, Zachary S., Rokni, Saba, Rutishauser, Rolf, de Salas, Miguel F., Schaefer, Hanno, Schley, Rowan J., Schmidt-Lebuhn, Alexander, Shapcott, Alison, Al-Shehbaz, Ihsan, Shepherd, Kelly A., Simmons, Mark P., Simões, André O., Simões, Ana Rita G., Siros, Michelle, Smidt, Eric C., Smith, James F., Snow, Neil, Soltis, Douglas E., Soltis, Pamela S., Soreng, Robert J., Sothers, Cynthia A., Starr, Julian R., Stevens, Peter F., Straub, Shannon C. K., Struwe, Lena, Taylor, Jennifer M., Telford, Ian R. H., Thornhill, Andrew H., Tooth, Ifeanna, Trias-Blasi, Anna, Udovicic, Frank, Utteridge, Timothy M. A., Del Valle, Jose C., Verboom, G. Anthony, Vonow, Helen P., Vorontsova, Maria S., de Vos, Jurriaan M., Al-Wattar, Noor, Waycott, Michelle, Welker, Cassiano A. D., White, Adam J., Wieringa, J.J. (Jan), Williamson, Luis T., Wilson, Trevor C., Wong, Sin Yeng, Woods, Lisa A., Woods, Roseina, Worboys, Stuart, Xanthos, Martin, Yang, Ya, Zhang, Yu-Xiao, Zhou, Meng-Yuan, Zmarzty, Sue, Zuloaga, Fernando O., Antonelli, Alexandre, Bellot, Sidonie, Crayn, Darren M., Grace, Olwen M., Kersey, Paul J., Leitch, Ilia J., Sauquet, Hervé, Smith, Stephen A., Eiserhardt, Wolf L., Forest, Félix, Baker, William J., Zuntini, Alexandre R., Carruthers, Tom, Maurin, Olivier, Bailey, Paul C., Leempoel, Kevin, Brewer, Grace E., Epitawalage, Niroshini, Françoso, Elaine, Gallego-Paramo, Berta, McGinnie, Catherine, Negrão, Raquel, Roy, Shyamali R., Simpson, Lalita, Toledo Romero, Eduardo, Barber, Vanessa M. A., Botigué, Laura, Clarkson, James J., Cowan, Robyn S., Dodsworth, Steven, Johnson, Matthew G., Kim, Jan T., Pokorny, Lisa, Wickett, Norman J., Antar, Guilherme M., DeBolt, Lucinda, Gutierrez, Karime, Hendriks, Kasper P., Hoewener, Alina, Hu, Ai-Qun, Joyce, Elizabeth M., Kikuchi, Izai A. B. S., Larridon, Isabel, Larson, Drew A., de Lírio, Elton John, Liu, Jing-Xia, Malakasi, Panagiota, Przelomska, Natalia A. S., Shah, Toral, Viruel, Juan, Allnutt, Theodore R., Ameka, Gabriel K., Andrew, Rose L., Appelhans, Marc S., Arista, Montserrat, Ariza, María Jesús, Arroyo, Juan, Arthan, Watchara, Bachelier, Julien B., Bailey, C. Donovan, Barnes, Helen F., Barrett, Matthew D., Barrett, Russell L., Bayer, Randall J., Bayly, Michael J., Biffin, Ed, Biggs, Nicky, Birch, Joanne L., Bogarín, Diego, Borosova, Renata, Bowles, Alexander M. C., Boyce, Peter C., Bramley, Gemma L. C., Briggs, Marie, Broadhurst, Linda, Brown, Gillian K., Bruhl, Jeremy J., Bruneau, Anne, Buerki, Sven, Burns, Edie, Byrne, Margaret, Cable, Stuart, Calladine, Ainsley, Callmander, Martin W., Cano, Ángela, Cantrill, David J., Cardinal-McTeague, Warren M., Carlsen, Mónica M., Carruthers, Abigail J. A., de Castro Mateo, Alejandra, Chase, Mark W., Chatrou, Lars W., Cheek, Martin, Chen, Shilin, Christenhusz, Maarten J. M., Christin, Pascal-Antoine, Clements, Mark A., Coffey, Skye C., Conran, John G., Cornejo, Xavier, Couvreur, Thomas L. P., Cowie, Ian D., Csiba, Laszlo, Darbyshire, Iain, Davidse, Gerrit, Davies, Nina M. J., Davis, Aaron P., van Dijk, Kor-jent, Downie, Stephen R., Duretto, Marco F., Duvall, Melvin R., Edwards, Sara L., Eggli, Urs, Erkens, Roy H. J., Escudero, Marcial, de la Estrella, Manuel, Fabriani, Federico, Fay, Michael F., Ferreira, Paola de L., Ficinski, Sarah Z., Fowler, Rachael M., Frisby, Sue, Fu, Lin, Fulcher, Tim, Galbany-Casals, Mercè, Gardner, Elliot M., German, Dmitry A., Giaretta, Augusto, Gibernau, Marc, Gillespie, Lynn J., González, Cynthia C., Goyder, David J., Graham, Sean W., Grall, Aurélie, Green, Laura, Gunn, Bee F., Gutiérrez, Diego G., Hackel, Jan, Haevermans, Thomas, Haigh, Anna, Hall, Jocelyn C., Hall, Tony, Harrison, Melissa J., Hatt, Sebastian A., Hidalgo, Oriane, Hodkinson, Trevor R., Holmes, Gareth D., Hopkins, Helen C. F., Jackson, Christopher J., James, Shelley A., Jobson, Richard W., Kadereit, Gudrun, Kahandawala, Imalka M., Kainulainen, Kent, Kato, Masahiro, Kellogg, Elizabeth A., King, Graham J., Klejevskaja, Beata, Klitgaard, Bente B., Klopper, Ronell R., Knapp, Sandra, Koch, Marcus A., Leebens-Mack, James H., Lens, Frederic, Leon, Christine J., Léveillé-Bourret, Étienne, Lewis, Gwilym P., Li, De-Zhu, Li, Lan, Liede-Schumann, Sigrid, Livshultz, Tatyana, Lorence, David, Lu, Meng, Lu-Irving, Patricia, Luber, Jaquelini, Lucas, Eve J., Luján, Manuel, Lum, Mabel, Macfarlane, Terry D., Magdalena, Carlos, Mansano, Vidal F., Masters, Lizo E., Mayo, Simon J., McColl, Kristina, McDonnell, Angela J., McDougall, Andrew E., McLay, Todd G. B., McPherson, Hannah, Meneses, Rosa I., Merckx, Vincent S. F. T., Michelangeli, Fabián A., Mitchell, John D., Monro, Alexandre K., Moore, Michael J., Mueller, Taryn L., Mummenhoff, Klaus, Munzinger, Jérôme, Muriel, Priscilla, Murphy, Daniel J., Nargar, Katharina, Nauheimer, Lars, Nge, Francis J., Nyffeler, Reto, Orejuela, Andrés, Ortiz, Edgardo M., Palazzesi, Luis, Peixoto, Ariane Luna, Pell, Susan K., Pellicer, Jaume, Penneys, Darin S., Perez-Escobar, Oscar A., Persson, Claes, Pignal, Marc, Pillon, Yohan, Pirani, José R., Plunkett, Gregory M., Powell, Robyn F., Prance, Ghillean T., Puglisi, Carmen, Qin, Ming, Rabeler, Richard K., Rees, Paul E. J., Renner, Matthew, Roalson, Eric H., Rodda, Michele, Rogers, Zachary S., Rokni, Saba, Rutishauser, Rolf, de Salas, Miguel F., Schaefer, Hanno, Schley, Rowan J., Schmidt-Lebuhn, Alexander, Shapcott, Alison, Al-Shehbaz, Ihsan, Shepherd, Kelly A., Simmons, Mark P., Simões, André O., Simões, Ana Rita G., Siros, Michelle, Smidt, Eric C., Smith, James F., Snow, Neil, Soltis, Douglas E., Soltis, Pamela S., Soreng, Robert J., Sothers, Cynthia A., Starr, Julian R., Stevens, Peter F., Straub, Shannon C. K., Struwe, Lena, Taylor, Jennifer M., Telford, Ian R. H., Thornhill, Andrew H., Tooth, Ifeanna, Trias-Blasi, Anna, Udovicic, Frank, Utteridge, Timothy M. A., Del Valle, Jose C., Verboom, G. Anthony, Vonow, Helen P., Vorontsova, Maria S., de Vos, Jurriaan M., Al-Wattar, Noor, Waycott, Michelle, Welker, Cassiano A. D., White, Adam J., Wieringa, J.J. (Jan), Williamson, Luis T., Wilson, Trevor C., Wong, Sin Yeng, Woods, Lisa A., Woods, Roseina, Worboys, Stuart, Xanthos, Martin, Yang, Ya, Zhang, Yu-Xiao, Zhou, Meng-Yuan, Zmarzty, Sue, Zuloaga, Fernando O., Antonelli, Alexandre, Bellot, Sidonie, Crayn, Darren M., Grace, Olwen M., Kersey, Paul J., Leitch, Ilia J., Sauquet, Hervé, Smith, Stephen A., Eiserhardt, Wolf L., Forest, Félix, and Baker, William J.
- Abstract
Angiosperms are the cornerstone of most terrestrial ecosystems and human livelihoods(1,2). A robust understanding of angiosperm evolution is required to explain their rise to ecological dominance. So far, the angiosperm tree of life has been determined primarily by means of analyses of the plastid genome(3,4). Many studies have drawn on this foundational work, such as classification and first insights into angiosperm diversification since their Mesozoic origins(5-7). However, the limited and biased sampling of both taxa and genomes undermines confidence in the tree and its implications. Here, we build the tree of life for almost 8,000 (about 60%) angiosperm genera using a standardized set of 353 nuclear genes(8). This 15-fold increase in genus-level sampling relative to comparable nuclear studies(9) provides a critical test of earlier results and brings notable change to key groups, especially in rosids, while substantiating many previously predicted relationships. Scaling this tree to time using 200 fossils, we discovered that early angiosperm evolution was characterized by high gene tree conflict and explosive diversification, giving rise to more than 80% of extant angiosperm orders. Steady diversification ensued through the remaining Mesozoic Era until rates resurged in the Cenozoic Era, concurrent with decreasing global temperatures and tightly linked with gene tree conflict. Taken together, our extensive sampling combined with advanced phylogenomic methods shows the deep history and full complexity in the evolution of a megadiverse clade.
- Published
- 2024
- Full Text
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6. Oxygen Fugacity of Global Ocean Island Basalts
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Willhite, Lori N., Willhite, Lori N., Arevalo, Ricardo Jr., Piccoli, Philip, Lassiter, John C., Rand, Devin, Jackson, Matthew G., Day, James M. D., Nicklas, Robert W., Locmelis, Marek, Ireland, Thomas J., Puchtel, Igor S., Willhite, Lori N., Willhite, Lori N., Arevalo, Ricardo Jr., Piccoli, Philip, Lassiter, John C., Rand, Devin, Jackson, Matthew G., Day, James M. D., Nicklas, Robert W., Locmelis, Marek, Ireland, Thomas J., and Puchtel, Igor S.
- Abstract
Mantle plumes contain heterogenous chemical components and sample variable depths of the mantle, enabling glimpses into the compositional structure of Earth's interior. In this study, we evaluated ocean island basalts (OIB) from nine plume locations to provide a global and systematic assessment of the relationship between fO2 and He-Sr-Nd-Pb-W-Os isotopic compositions. Ocean island basalts from the Pacific (Austral Islands, Hawaii, Mangaia, Samoa, Pitcairn), Atlantic (Azores, Canary Islands, St. Helena), and Indian Oceans (La Réunion) reveal that fO2 in OIB is heterogeneous both within and among hotspots. Taken together with previous studies, global OIB have elevated and heterogenous fO2 (average = +0.5 ∆FMQ; 2SD = 1.5) relative to prior estimates of global mid-ocean ridge basalts (MORB; average = −0.1 ∆FMQ; 2SD = 0.6), though many individual OIB overlap MORB. Specific mantle components, such as HIMU and enriched mantle 2 (EM2), defined by radiogenic Pb and Sr isotopic compositions compared to other OIB, respectively, have distinctly high fO2 based on statistical analysis. Elevated fO2 in OIB samples of these components is associated with higher whole-rock CaO/Al2O3 and olivine CaO content, which may be linked to recycled carbonated oceanic crust. EM1-type and geochemically depleted OIB are generally not as oxidized, possibly due to limited oxidizing potential of the recycled material in the enriched mantle 1 (EM1) component (e.g., sediment) or lack of recycled materials in geochemically depleted OIB. Despite systematic offset of the fO2 among EM1-, EM2-, and HIMU-type OIB, geochemical indices of lithospheric recycling, such as Sr-Nd-Pb-Os isotopic systems, generally do not correlate with fO2.
- Published
- 2024
7. PCM4EU and PRIME-ROSE:Collaboration for implementation of precision cancer medicine in Europe
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Taskén, Kjetil, F Haj Mohammad, Soemeya, Fagereng, Gro Live, Sørum Falk, Ragnhild, Helland, Åslaug, Barjesteh van Waalwijk van Doorn-Khosrovani, Sahar, Steen Carlsson, Katarina, Ryll, Bettina, Jalkanen, Katriina, Edsjö, Anders, Russnes, Hege G., Lassen, Ulrik, Hallersjö Hult, Ebba, Lugowska, Iwona, Blay, Jean Yves, Verlingue, Loic, Abel, Edvard, Lowery, Maeve A., Krebs, Matthew G., Staal Rohrberg, Kristoffer, Ojamaa, Kristiina, Oliveira, Julio, Verheul, Henk M.W., Voest, Emile E., Gelderblom, Hans, Taskén, Kjetil, F Haj Mohammad, Soemeya, Fagereng, Gro Live, Sørum Falk, Ragnhild, Helland, Åslaug, Barjesteh van Waalwijk van Doorn-Khosrovani, Sahar, Steen Carlsson, Katarina, Ryll, Bettina, Jalkanen, Katriina, Edsjö, Anders, Russnes, Hege G., Lassen, Ulrik, Hallersjö Hult, Ebba, Lugowska, Iwona, Blay, Jean Yves, Verlingue, Loic, Abel, Edvard, Lowery, Maeve A., Krebs, Matthew G., Staal Rohrberg, Kristoffer, Ojamaa, Kristiina, Oliveira, Julio, Verheul, Henk M.W., Voest, Emile E., and Gelderblom, Hans
- Abstract
Background: In the two European Union (EU)-funded projects, PCM4EU (Personalized Cancer Medicine for all EU citizens) and PRIME-ROSE (Precision Cancer Medicine Repurposing System Using Pragmatic Clinical Trials), we aim to facilitate implementation of precision cancer medicine (PCM) in Europe by leveraging the experience from ongoing national initiatives that have already been particularly successful. Patients and methods: PCM4EU and PRIME-ROSE gather 17 and 24 partners, respectively, from 19 European countries. The projects are based on a network of Drug Rediscovery Protocol (DRUP)-like clinical trials that are currently ongoing or soon to start in 11 different countries, and with more trials expected to be established soon. The main aims of both the projects are to improve implementation pathways from molecular diagnostics to treatment, and reimbursement of diagnostics and tumour-tailored therapies to provide examples of best practices for PCM in Europe. Results: PCM4EU and PRIME-ROSE were launched in January and July 2023, respectively. Educational materials, including a podcast series, are already available from the PCM4EU website (http://www.pcm4eu. eu). The first reports, including an overview of requirements for the reimbursement systems in participating countries and a guide on patient involvement, are expected to be published in 2024. Conclusion: European collaboration can facilitate the implementation of PCM and thereby provide affordable and equitable access to precision diagnostics and matched therapies for more patients.
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- 2024
8. Matthew Gaber: Peekaboo Transformer Models
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Gaber, Matthew G., Ahmed, Mohiuddin, Janicke, Helge, Gaber, Matthew G., Ahmed, Mohiuddin, and Janicke, Helge
- Abstract
Finding automated AI techniques to proactively defend against malware has become increasingly critical. The ability of an AI model to correctly classify novel malware is dependent on the quality of the features it is trained with. In turn, the authenticity and quality of the features is dependent on the analysis tool and the dataset. Peekaboo, a Dynamic Binary Instrumentation tool defeats evasive malware to capture its genuine behavior. Transformer models trained with Peekaboo data excel in detecting new malicious functions, outperforming prior approaches in novel ransomware detection.This dataset contains the fine tuned models and the Colab scripts used for training and testing.
- Published
- 2024
9. Global disparities in surgeons’ workloads, academic engagement and rest periods: the on-calL shIft fOr geNEral SurgeonS (LIONESS) study
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Podda, M, Di Martino, M, Pata, F, Nigri, G, Pisanu, A, Di Saverio, S, Pellino, G, Ielpo, B, Null, N, Tolla, A, Abdelkhalek, M, Emile, S, Dinagde, T, Bouzid, C, Mansour, A, Garzali, I, Aregawi, A, Zaghloul, T, Kchaou, A, Awad, S, Souadka, A, Ted, T, Saumtally, M, Ahmed, B, Bayileyegn, N, Nunziante, M, Shalaby, M, Debena, D, Zena, A, Adewunmi, O, Negasa, T, Bourguiba, M, Feituri, N, Kebede, K, Elfeki, H, Anas, A, Awad, A, Ermias, N, Hailemariam, D, Bejiga, G, Imana, R, Taffese, A, Feleke, T, Elghadban, H, Debela, B, Shiferaw, D, Tadesse, R, Chukwu, I, Mohammed, A, Hassen, K, Obiagwu, N, Tense, T, Taeme, M, Biniam, E, Tesfay, G, Tegegn, A, Teddy, T, Bekana, B, Nidaw, M, Ali, M, Gonfa, K, Kiros, S, Belay, T, Yallew, G, Wassie, C, Ayalew, A, Asfaw, F, Aimal, A, Casas, M, Madrid, F, Diaz-Elizondo, J, Merlo, I, De Campos, T, Schlottmann, F, Gomes, C, Hernández, E, Moncada-Ortega, A, Ramos-De la Medina, A, Vanerio, P, Morales, E, Stringfield, S, Gallardo, C, Fonseca, V, Muriel, M, Cantarino, F, Fichera, A, Rodriguez, A, Salinas, R, Crosbie, G, Menegozzo, C, Avellaneda, N, Briones, C, Varela, C, Lichliter, W, Koppel, D, Lenz, J, Pascual, F, Sibaja-Matamoros, D, Johnson, B, Mercado, O, Tita, A, Mukherjee, I, Lorenzo, I, Rueda, E, Rico, D, Terwes, N, Visag-Castillo, V, Escalante, K, Salvador, A, Pio, L, Rodas, E, Aguilar, J, Neri, I, Barzola, E, Barba, L, Zuchini, A, Acevedo, A, Gachabayov, M, Gonsaga, R, Bonilla, F, Knickerbocker, C, Tsouknidas, I, Salamea, J, Travers, L, Nari, G, Pachajoa, D, Valadez, M, Hale, L, Perez, G, Choudhry, A, Foreman, M, Brito, I, Ciro, M, Newton, C, Souza, H, Davis, D, Ferreira, R, Keller, D, Miguel, G, Singh-Ranger, G, Linares, N, Singares, E, Valdivieso, X, Teran, A, Vargas, L, Valinoti, A, Milne, D, Fleming, A, Quiroga-Garza, A, Espino, E, Bedros, N, Funk, G, Neves, F, Supit, T, Baba, A, Chalkoo, M, Kucuk, G, Sarmiento, R, Galeev, S, Korkoman, M, Yang, W, Medappil, N, Athar, R, Subramaniam, R, Chia, C, Alhazmi, A, Halder, S, Rusli, S, Rashid, A, Gülcü, B, Nagarajan, P, Rida, K, Jamiri, A, Batıkan, O, Khan, H, Mitul, A, Efetov, S, Junior, M, Gulcu, B, Farooqui, M, Mulpuri, V, Bagaria, D, Yusoff, A, Wani, R, Younis, M, Khobragade, K, Marwat, M, Bains, L, Kobe, Y, Koh, P, Tantravahi, U, Mohamad Mohamad, I, Abu-Arish, H, Yildirim, A, Ibrahim, A, Tan, J, Siagian, D, Bhattacharya, N, Chiu, J, Paramasvaran, G, Voon, K, Göktepe, B, Lee, L, Gupta, A, Rasheed, F, Al-Shehari, M, Syed, S, Bhat, P, Erdoğan, E, Roat, R, Nacion, A, Saraiya, S, Afolabi, A, Chai, F, Ghannam, W, Bhattacharya, K, Nl, H, Aloun, A, Bhatti, H, Koneti, A, Klib, M, Qureshi, A, Syn, N, Wani, A, Saeidi, S, Zeb, M, Bandaru, K, Menna, M, Morales-Conde, S, Gessa, E, Sánchez-Cabús, S, Spartalis, E, Antropoli, C, Manigrasso, M, Sica, G, Ercolani, G, Chitul, A, Bacchiocchi, G, Azevedo, J, Karamarkovic, A, Bonavina, L, Piozzi, G, Migueláñez, I, Merlini, D, Major, P, Grimaldi, L, Calu, V, Curro, G, Cotsoglou, C, Baldini, E, Delis, S, Kovacevic, B, Masetti, M, Selvaggi, F, Scabini, S, Reiti, A, Zullo, A, Giuliani, A, Alesina, P, Massey, L, Slesser, A, Neary, P, Sahnan, K, Colucci, G, Brady, R, Mihailescu, A, Adamina, M, Gerogiannis, I, van Ramshorst, G, Paradiso, G, Poto, G, Massaro, D, Nazir, F, Stubbs, B, Tasselli, F, Muñoz-Cruzado, V, Sabia, D, Vannelli, A, Marsella, V, Tomada, E, Giambusso, M, Davies, J, Uzzau, A, Balla, A, Scaringi, S, Lancellotti, F, Douka, E, Argenio, G, Cassese, G, Ammendola, M, Morelli, L, Francone, E, Bala, M, Thambi, P, Iacobone, M, Campisi, A, Tejedor, P, Spoletini, G, Mascherini, M, Belia, F, Idiz, U, Colak, E, Peters, P, Ros, E, Aytac, E, Vilallonga, R, Serrablo, A, Muttillo, E, Di Franco, G, Vanni, G, Isik, A, Sbacco, V, Tropeano, F, Porcellini, I, Butler, R, Fernandez, C, Papadopoulos, A, Salvans, S, Khan, J, Bellver, P, Mc Farlane, S, Apostolou, K, Tur-Martinez, J, Castellano, J, Santoliquido, M, Tallon-Aguilar, L, Celentano, V, Aliyev, V, al-Najami, I, Grama, F, Masior, Ł, Ciesielski, W, Luberto, A, Sparavigna, M, Klimczak, T, Negoi, I, Serradilla-Martín, M, Marinis, A, Cammarat, R, Bellido-luque, J, Manzo, C, Milana, F, Luglio, G, Zarnescu, N, Martínez, I, Olmi, S, Costea, R, Cerdán-Santacruz, C, Gica, N, Rompianesi, G, Gallo, G, Ridolfi, C, Sahid, S, Cc, T, López-Soler, G, Díaz, C, Mccawley, N, Luzzi, A, Abelló, D, Bonito, A, Ntomi, V, Gourgiotis, S, Pazos, N, Toscano, M, Zafra, D, Beisani, M, Oliva, A, Guler, M, Gómez, M, Oddis, L, Montcusí, B, Delgado, A, Lasarte, M, Antonacci, N, Sartori, A, Taylor, J, de Santos Iglesias, F, Mastronardi, M, Gunay, E, Yiu, A, Cano-Valderrama, O, Costantini, G, Digne-Malcolm, H, Petropoulou, T, Horesh, N, Kelly, M, Ahmed, N, Wyroslak-Najs, J, Naik, P, Vigorita, V, Michael, M, Castro, E, Paspala, A, D'Ambrosio, M, Pangeni, A, Dziakova, J, Terés, L, Lorente-Poch, L, Di Carlo, I, Spartalis, M, Moro-Valdezate, D, Davey, M, Turrado-Rodriguez, V, Tryliskyy, Y, Calussi, M, Farré, S, Labat, M, Marafante, C, Takkenberg, M, Brookes, C, Soares, A, Gialamas, E, Caputo, D, Corrons, L, Capitano, S, Charalabopoulos, A, Don, C, Marrano, E, Giuffrida, M, Tomasicchio, G, Bellato, V, Stijns, J, Creavin, B, Schizas, D, Blanco-Antona, F, Kykalos, S, Tartaglia, N, Pelegrina, A, Barranquero, A, Schena, C, Cremona, S, Baili, E, Cianci, P, Di Bella, A, Forcignanò, E, Fabbrizio, T, Salvetti, F, Inama, M, Campagnaro, T, Deerenberg, E, Reccia, I, Rocca, A, Fazio, F, Tampakis, A, Tepelenis, K, Di Meo, G, Konstantoudakis, G, Manatakis, D, Mineccia, M, Delvecchio, A, Faro, C, Rosso, E, Bandyopadhyay, S, Queffurus, M, Marin, J, Corvasce, A, Chillarge, G, Mohammed, M, Reid, R, Gherardi, D, Naeem, A, Pandanaboyana, S, Tayeh, S, Chevallay, M, Sergeant, G, Cuccomarino, S, Salimian, N, Kapsampelis, P, Ferretti, C, Glasbey, J, Harvitkar, R, Iqbal, M, de Oliveira, G, Pérez-Bertólez, S, Bergna, A, Brisinda, G, Rottoli, M, Roscio, F, Pedrazzani, C, Meyer, J, Marino, M, Brasset, C, Daniel, C, Devriendt, S, Soldini, G, Pennisi, D, Richards, C, Fiore, F, Bocchino, A, Au, S, Hernandez-Garcia, M, Frontali, A, Grossi, U, Lolis, E, Miotto, M, Di Filippo, G, Seretis, C, Barberis, A, De Luca, R, Levi Sandri, G, Reitano, E, Mattioli, M, Sciaudone, G, Fuschillo, G, Schiltz, B, Low, J, Bointas, G, Cozza, V, Delaune, V, Vescio, F, Curcio, S, Sevik, H, Santocchi, P, Stecca, T, Balaphas, A, Chessa, A, Leo, C, di Mola, F, Tarallo, M, Martini, F, Lisi, G, Khan, M, Nicolazzi, M, Pinotti, E, Morini, A, Esposito, G, Buonomo, O, Corallino, D, Demir, A, Roesel, R, De Lucia, C, Maruccia, M, Tekin, O, Pavone, G, Pradelle, I, Chrysikos, M, Farrukh, M, Baiocchi, G, Piras, C, Abellán, A, Olivieri, L, Materazzo, M, Carbone, L, Dulskas, A, Mulita, F, Corronca, F, Cappuccio, M, Smerieri, E, Sotiropoulu, M, Violante, T, Moletta, L, Rutegård, M, Brillantino, A, Landaluce-Olavarria, A, Ossola, P, Bono, D, Rosés, H, Perez-Sanchez, L, Sabbatini, S, Scotti, M, Cammarata, R, Ibáñez, N, Marano, A, Palmisano, S, Cascales-Sanchez, P, Mosca, V, Ballester, C, Iordache-Petrescu, M, Pozza, G, Akay, O, Bollino, R, Toti, J, Mascianà, G, Pach, R, Sensi, B, Natalia, S, Coppola, A, Altinel, Y, Brucchi, F, Guitart, M, Salido, A, Tamini, N, Garoufalia, Z, Mifsut, P, Wilkins, A, Navarro-Sánchez, A, Cestaro, G, Conti, L, Carvas, J, Gazia, C, Alonso, P, Spiezio, G, Maggi, G, Juloski, J, Braccio, B, Pañella, C, Freixa, C, Petrakis, G, Folliero, C, De Andrés-Asenjo, B, Iodice, A, Jansson, H, González, T, Ortega, I, Castro, M, Fernicola, A, Aparicio, A, Ortega, N, Chouliaras, C, Tura, M, Sidiropoulou, Z, Gonzalez, A, Augustin, G, Segura-Sampedro, J, Cuk, V, Piccolo, G, Ingallinella, S, Ortenzi, M, Uggeri, F, Carrabetta, S, Tolonen, M, Formisano, G, Manfredelli, S, Perra, T, Esposito, F, Perrone, G, Zacharis, G, Menéndez, J, Bottcher, S, Ioannidis, O, Borges, N, Sousa, X, Colombari, R, Tellez, C, Capolupo, G, Giuliani, G, Mastella, F, González, L, Merlini, I, Ghignone, F, de Sa, T, Mangana, O, Rodriguez-Lopez, M, Alvarez-Gallego, M, Chowdhury, A, Di Lascio, P, Carneros, V, Angrisani, M, Conte, L, Montiel, C, Ascari, F, Dajti, I, Lapolla, P, Sperotto, B, Mazzarella, G, Capuano, M, Lopez, M, Ferrario, L, Bulte, J, López, M, Guerci, C, Marra, A, Belkacem, A, Pérez, R, Panyko, A, Dimitrov, E, Luque, E, Manrique, M, Paranyak, M, Kaur, M, Barugola, G, Farazi-Chongouki, C, Estaire-Gómez, M, del Olmo, J, Nardo, B, Mutlu, A, Rubio, A, Marchegiani, F, Cereda, M, Vinci, D, Komaei, I, Petrucciani, N, Seyfried, S, Krsicka, P, Medas, F, Lesko, D, Murzi, V, Siragusa, L, Guerrero, M, Iranzo, M, Cestino, L, Pasculli, A, Smerieri, N, Benzoni, I, Festa, F, Jordão, D, Licardie, E, Nicolaescu, D, Balassone, V, La Vaccara, V, Romano, F, Adamovich, D, Papatheodorou, P, Maroni, N, Colás-Ruiz, E, Melberga, L, Chimenti, F, Ferrari, D, Arcudi, C, Police, A, De Simone, B, Sánchez-Guillén, L, Parreño-Manchado, F, Rachadell, J, Coletta, D, Saroglu, A, Pattacini, G, Antonelli, A, Anania, M, Litta, F, Lafranceschina, S, Bottari, A, Pavlovic, M, Rojas-Bonet, N, Tampaki, E, Kosir, J, Anelli, F, de las Casas, S, Kucukarslan, R, Pierobon, E, Milanesi, M, Drogouti, M, Sotiropoulou, M, Di Marco, F, Bannone, E, Sliwinski, S, Yildiz, I, Pellicciaro, M, Celotti, A, Malerba, M, Marino, F, Bourmpouteli, E, Bianco, G, Charitaki, E, Pascale, M, Ioannidis, A, Maraska, F, Petagna, L, Turri, G, Vailas, M, Romanzi, A, Pouwels, S, Rosa, F, Clocchiatti, L, Andreuccetti, J, Machairas, N, Frountzas, M, Lasithiotakis, K, Barone, M, Christodoulou, P, Potkonjak, D, Aiolfi, A, de Vries, H, Napetti, S, Castaldi, A, Botelho, P, Marziali, I, Uccelli, M, Pisano, M, Veroux, M, Locci, E, Romano, A, Cero, M, Cicerchia, P, Baldi, C, Russo, I, Tenconi, S, Saliu, F, Bondurri, A, Cardinali, L, Laracca, G, Martín-Pérez, B, Felsenreich, D, Cunha, M, Zerbo, D, Clementi, M, Delogu, D, Iossa, A, Bavikatte, A, Saracoglu, C, Pecorelli, N, Tufo, A, Biloslavo, A, Lianos, G, Carannante, F, Costanzo, A, Montuori, M, Cigognini, M, Silvestro, R, Atici, S, Milito, P, Ferronetti, A, Güngör, M, Di Venere, B, Puccioni, C, De Nobili, G, Selvaggi, L, Farolfi, T, Aeschbacher, P, Olivier, J, Frazzetta, G, Andriola, V, Giordano, A, De Luca, A, Ferrara, F, Casagranda, B, Sammartano, F, Russo, A, Rossi, S, Pacilli, M, Synekidou, E, Tutino, R, Ceresoli, M, De Rosa, M, Di Santo Albini, A, Vincenzi, P, Vellei, S, Benzoni, E, Murillo, G, Izzo, G, Scotto, B, Caruso, R, Colombo, F, D'Acapito, F, Lostoridis, E, Saladino, E, Poillucci, G, Moeckli, B, Manto, O, Kara, Y, Tatar, C, Cioffi, S, Mambrilla, S, Bianchi, V, Scopelliti, M, Agresta, F, Nava, A, Franchi, E, Fransvea, P, Prieto, M, Picardi, B, Rizzuto, A, Panaccio, P, Gussago, S, Marra, E, Addeo, P, Fernández Fernández, J, Gulmez, M, Pisaniello, D, Cannavo, M, López-López, V, Avella, P, Peloso, A, Bellanova, G, Candilio, G, Perotti, B, Granata, R, Florio, G, Ioia, G, Iannone, I, Ammerata, G, Zambon, M, Del Monte, S, Sasia, D, Fortuna, L, Litvin, A, Cannistra, M, De Padua, C, Sánchez, T, Paniagua-Garcia-Señorans, M, Guevara, J, Perfecto, A, Alconchel, F, Campanelli, M, Keci, L, Cricrì, M, Kampouroglou, G, Bagaglini, G, Farrarons, S, Greco, A, Walędziak, M, Serrano-Navidad, M, Van Doorn, B, Schiavo, C, Fabbri, N, Wani, I, Mondi, I, Anestiadou, E, Mendes, B, Verdi, D, Dorovinis, P, Cacciaguerra, A, Caldeira, B, Canonico, G, Dardanov, D, D'Ugo, S, Francis, F, Meneghini, S, Pesce, A, Puglisi, S, Bellini, M, Giordano, M, Fleres, F, Campus, F, Cillara, N, Moggia, E, Ciarleglio, F, Calini, G, Gravante, G, De Carlis, R, Altomare, M, Martines, G, Miggino, M, Marano, L, Stocco, A, Porcu, A, Pham, T, Gervasi, M, Pilia, T, Palomba, G, Picchetto, A, Spampinato, M, Tandoi, F, Piccoli, M, Gall, M, Santos, B, Agastra, E, Koëter, T, Samadov, E, Marsanic, P, Serena, D, Uzunoglu, M, Zanus, G, Braholli, E, Giovine, G, Galiffa, G, Lauricella, S, Lukmonov, S, Leventoglu, S, Chooklin, S, Dudi-Venkata, N, Gauci, C, Podda, Mauro, Di Martino, Marcello, Pata, Francesco, Nigri, Giuseppe, Pisanu, Adolfo, Di Saverio, Salomone, Pellino, Gianluca, Ielpo, Benedetto, null, null, Tolla, Ashenafi Negash, Abdelkhalek, Mohamed, Emile, Sameh, Dinagde, Tesfaye Aga, Bouzid, Chafik, Mansour, Ahmed Mohammed Farid Mahmoud, Garzali, Ibrahim Umar, Aregawi, Alazar Berhe, Zaghloul, Tarek M., Kchaou, Ali, Awad, Selmy S., Souadka, Amine, Ted, Tedla Gebretsadik, Saumtally, Mohammad Saad, Ahmed, Bensaad, Bayileyegn, Nebiyou Simegnew, Nunziante, Marco, Shalaby, Mostafa, Debena, Dawit Gebregiorgis, Zena, Alemayehu Shanko, Adewunmi, Olayinka Lukman, Negasa, Tolera A., Bourguiba, Mohamed Aboulkacem, Feituri, Nura, Kebede, Kirubel Abebe, Elfeki, Hossam, Anas, Abdelhmed, Awad, Ahmed K., Ermias, Nebiyou, Hailemariam, Dagnachew H., Bejiga, Gosa Hundie, Imana, Ruhama Yoseph, Taffese, Abebe, Feleke, Tsega Terefe, Elghadban, Hosam Mohamed, Debela, Bizuneh Sime, Shiferaw, Desta, Tadesse, Robel, Chukwu, Isaac Sunday, Mohammed, Abdullahi Ibrahim, Hassen, Khalid Arebo, Obiagwu, Ndubuisi K., Tense, Tadesse H., Taeme, Mulugeta, Biniam, Ewnte, Tesfay, Goytom Knfe, Tegegn, Ayenachew Getachew, Teddy, Tewodros Abule Bilata, Bekana, Bekana L., Nidaw, Melkamu Kibret, Ali, Mahmoud Ibrahim, Gonfa, Kebebe Bekele, Kiros, Samuel, Belay, Tatek, Yallew, Gebeyaw Mengist, Wassie, Chekol, Ayalew, Alem Mekete, Asfaw, Fitsum Terefe, Aimal, Aimal Khan, Casas, Maria Agustina, Madrid, Fausto A., Diaz-Elizondo, Jose Antonio, Merlo, Ignacio Guillermo, De Campos, Tercio, Schlottmann, Francisco, Gomes, Carlos Augusto, Hernández, Edgard Efrén Lozada, Moncada-Ortega, Augusto, Ramos-De la Medina, Antonio, Vanerio, Patricio, Morales, Emilio J., Stringfield, Sarah Beth, Gallardo, Cristian, Fonseca, Vinicius Cordeiro, Muriel, Maria Emilia, Cantarino, Frederico, Fichera, Alessandro, Rodriguez, Agustin E., Salinas, Roberto Paúl Andrade, Crosbie, Gonzalo Gabriel, Menegozzo, Carlos Augusto Metidieri, Avellaneda, Nicolas, Briones, Cristhian Gonzalo Aspiazu, Varela, Cristopher, Lichliter, Warren E., Varela, Cristopher L., Koppel, Darren, Lenz, Jorge Godoy, Pascual, Franco, Sibaja-Matamoros, Dauber A., Johnson, Benjamin E., Mercado, Octavio Avila, Tita, Agustín, Mukherjee, Indraneil, Lorenzo, Irving, Rueda, Erick, Rico, Douglas, Terwes, Natasha Loria, Visag-Castillo, Victor, Escalante, Karol S., Salvador, Alan Francisco Alfaro, Pio, Luca, Rodas, Edgar B., Aguilar, Juan Carlos Cardozo, Neri, Ignacio, Barzola, Ernesto J., Barba, Leonardo A., Zuchini, Andrés Mendoza, Acevedo, Ana Karen Radilla, Gachabayov, Mahir, Gonsaga, Ricardo Alessandro Teixeira, Bonilla, Fernando, Knickerbocker, Chase Barrett, Tsouknidas, Ioannis, Salamea, Juan C., Travers, Lawrence Albert Salter, Nari, Gustavo Adrian, Pachajoa, Diana Alejandra Pantoja, Valadez, Michel Hernandez, Hale, Lyman Lansing, Perez, Guillermo, Choudhry, Asad, Foreman, Michaael L., Brito, Ismael, Ciro, Mauricio Pedraza, Newton, Carla Joyce, Souza, Hamilton Petry, Davis, Daniel G., Ferreira, Rodrigo Vaz, Keller, Deborah S., Miguel, Gustavo Machain, Singh-Ranger, Gurpreet, Linares, Neiling Massiel Oviedo, Singares, Eduardo Smith, Valdivieso, Xavier HGarcía, Teran, Alfonso Ivan Sanchez, Vargas, Luis Felipe Cabrera, Valinoti, Agustín, Milne, David M., Fleming, Andrew Martin, Quiroga-Garza, Alejandro, Espino, Eduardo Morales, Bedros, Nicole Mary, Funk, Geoffrey A., Neves, Fernanda V. S., Supit, Tommy, Baba, Arshad Ahmed, Chalkoo, Mushtaq A., Kucuk, Gultekin Ozan, Sarmiento, Ray Inocencio, Galeev, Shamil I., Korkoman, Mohammed J., Yang, Wah, Medappil, Noushif, Athar, Rahmatullah, Subramaniam, Ravichandran, Chia, Chi Fung, Alhazmi, Ahmad, Halder, Subhadip, Rusli, Siti Mayuha, Rashid, Arshad, Gülcü, Barış, Nagarajan, Prasanth, Rida, Khaled, Jamiri, Al-Radjid, Batıkan, Oğuzkağan, Khan, Huma Ahmed, Mitul, Ashrarur Rahman, Efetov, Sergey, Junior, Marcelo A. F. Ribeiro, Gulcu, Baris, Farooqui, Marryam Riaz, Mulpuri, Venu Bhargava, Bagaria, Dinesh, Yusoff, Ahmad Ramzi, Wani, Rauf, Younis, Muhammad Umar, Khobragade, Krunal H., Marwat, Muhammad Ibrahim, Bains, Lovenish, Kobe, Yoshiro, Koh, Peng Soon, Tantravahi, Umasankar, Mohamad Mohamad, Ikhwan Sani, Abu-Arish, Hamdoon, Yildirim, Ali Cihat, Ibrahim, Aini Fahriza, Tan, Jih Huei, Siagian, Dumaria Ketty, Bhattacharya, Neela, Chiu, Jennifer H. F., Paramasvaran, Ganendra, Voon, Kelvin, Göktepe, Berk, Lee, Lee Yeong Sing, Gupta, Amit, Rasheed, Faaiz, Al-Shehari, Mohammed, Syed, Syed Muhammad Ali, Bhat, Pawan Singh, Erdoğan, Emre, Roat, Rajesh, Nacion, Aeris Jane D., Saraiya, Swapnil Mukesh, Afolabi, Akinwale Ibrahim, Chai, Feng Yih, Ghannam, Wagih, Bhattacharya, Kaushik, NL, Harish, Aloun, Ali, Bhatti, Hamza Waqar, Koneti, Akshadhar J., Klib, Mohamad, Qureshi, Ahmad Uzair, Syn, Nicholas L., Wani, Ajaz, Saeidi, Sara, Zeb, Muhammad, Bandaru, Kalyan Vijay Kumar, Menna, Maria Paola, Morales-Conde, Salvador, Gessa, Emanuela, Sánchez-Cabús, Santiago, Spartalis, Eleftherios, Antropoli, Carmine, Manigrasso, Michele, Sica, Giuseppe S., Ercolani, Giorgio, Chitul, Andrei, Bacchiocchi, Giulia, Azevedo, José, Karamarkovic, Aleksandar, Bonavina, Luigi, Piozzi, Guglielmo N., Migueláñez, Isabel Pascual, Merlini, David, Major, Piotr, Grimaldi, Luciano, Calu, Valentin, Curro, Giuseppe, Cotsoglou, Christian, Baldini, Edoardo, Delis, Spiros, Kovacevic, Bojan, Masetti, Michele, Selvaggi, Francesco, Scabini, Stefano, Reiti, Andrian, Zullo, Alessia, Giuliani, Antonio, Alesina, Pier Francesco, Massey, Lisa H., Slesser, Alistair A. P., Neary, Peter M., Sahnan, Kapil, Tan, Jessica J., Colucci, Gianluca, Brady, Richard R. W., Mihailescu, Andrei, Adamina, Michel, Gerogiannis, Ioannis, van Ramshorst, Gabrielle, Paradiso, Giulia, Poto, Gianmario Edoardo, Massaro, Daniele, Nazir, Fozia, Stubbs, Benjamin M., Tasselli, Francesco Menegon, Muñoz-Cruzado, Virginia Durán, Sabia, Domenico, Vannelli, Alberto, Marsella, Valentina Enrica, Tomada, Elisa Paoluzzi, Giambusso, Mauro, Davies, Justin, Uzzau, Alessandro, Balla, Andrea, Scaringi, Stefano, Lancellotti, Francesco, Douka, Eleftheria, Argenio, Giulio, Cassese, Gianluca, Ammendola, Michele, Morelli, Luca, Francone, Elisa, Bala, Miklosh, Thambi, Prem, Iacobone, Maurizio, Campisi, Andrea, Tejedor, Patricia, Spoletini, Gabriele, Mascherini, Matteo, Belia, Francesco, Idiz, Ufuk Oguz, Colak, Elif, Peters, Paul Adewunmi, Ros, Emilio Peña, Aytac, Erman, Vilallonga, Ramon, Serrablo, Alejandro, Muttillo, Edoardo Maria, Di Franco, Gregorio, Vanni, Gianluca, Isik, Arda, Sbacco, Valentina, Tropeano, Francesca Paola, Porcellini, Iride, Butler, Rebecca Jayne, Fernandez, Carmen Cagigas, Papadopoulos, Aristeidis, Salvans, Silvia, Khan, Jan Sher, Bellver, Pedro Palazón, Mc Farlane, Sebastian Jeri, Apostolou, Konstantinos, Tur-Martinez, Jaume, Castellano, Javier Rivera, Santoliquido, Matteo, Tallon-Aguilar, Luis, Celentano, Valerio, Aliyev, Vusal, al-Najami, Issam, Grama, Florin A., Masior, Łukasz, Ciesielski, Wojciech J., Luberto, Antonio, Sparavigna, Marco, Klimczak, Tomasz Jerzy, Negoi, Ionut, Serradilla-Martín, Mario, Marinis, Athanasios, Cammarat, Roberto, Bellido-luque, Juan, Manzo, Carlo Alberto, Milana, Flavio, Luglio, Gaetano, Zarnescu, Narcis Octavian, Martínez, Isidro, Olmi, Stefano, Costea, Radu V., Cerdán-Santacruz, Carlos, Gica, Nicolae, Rompianesi, Gianluca, Gallo, Gaetano, Ridolfi, Cristina, Sahid, Saidah, CC, Tommaso, López-Soler, Guillermo, Díaz, Carlos JGómez, Mccawley, Niamh, Luzzi, Andrea Pierre, Abelló, David, Bonito, Alba Correa, Ntomi, Vasileia, Gourgiotis, Stavros, Pazos, Natalia Suárez, Toscano, Marta Jiménez, Zafra, David Ambrona, Beisani, Marc, Oliva, Alba, Guler, Mert, Gómez, Marta Jiménez, Oddis, Lidia, Montcusí, Blanca, Delgado, Ander Timoteo, Lasarte, Mateusz PJęckowski Aingeru Sarriuga, Antonacci, Nicola, Sartori, Alberto, Taylor, John Vincent, de Santos Iglesias, Francisco Juan, Mastronardi, Manuela, Gunay, Emre, Yiu, Andrew, Cano-Valderrama, Oscar, Costantini, Giulia, Digne-Malcolm, Holly Jane, Petropoulou, Thalia, Horesh, Nir, Kelly, Michael E., Ahmed, Nauman, Wyroslak-Najs, Justyna, Naik, Prashant, Vigorita, Vincenzo, Michael, Michael, Castro, Ernest, Paspala, Anna, D'Ambrosio, Marco, Pangeni, Anang, Dziakova, Jana, Terés, Lara Blanco, Lorente-Poch, Leyre, Di Carlo, Isidoro, Spartalis, Michael, Moro-Valdezate, David, Davey, Matthew G., Turrado-Rodriguez, Victor, Tryliskyy, Yegor, Calussi, Marco, Farré, Silvia Pérez, Labat, Miriam Cazador, Marafante, Chiara, Takkenberg, Marijn, Brookes, Charlotte Elisabeth, Soares, Antonio S., Gialamas, Eleftherios, Caputo, Damiano, Corrons, Laia Codina, Capitano, Sante, Charalabopoulos, Alexandros, Don, Cristine Brooke Pathirannehalage, Marrano, Enrico, Giuffrida, Maria Carmela, Tomasicchio, Giovanni, Bellato, Vittoria, Stijns, Jasper, Creavin, Ben, Schizas, Dimitrios, Blanco-Antona, Francisco, Kykalos, Stylianos, Tartaglia, Nicola, Pelegrina, Amalia, Barranquero, Alberto G., Schena, Carlo Alberto, Cremona, Simone, Baili, Efstratia, Cianci, Pasquale, Di Bella, Annamaria, Forcignanò, Edoardo, Fabbrizio, Tiziana, Salvetti, Francesco, Inama, Marco, Campagnaro, Tommaso, Deerenberg, Eva B., Reccia, Isabella, Rocca, Aldo, Fazio, Federico, Tampakis, Athanasios, Tepelenis, Kostas, Di Meo, Giovanna, Konstantoudakis, Georgios, Manatakis, Dimitrios K., Mineccia, Michela, Delvecchio, Antonella, Faro, Carmelo Lo, Rosso, Edoardo, Bandyopadhyay, Samik K., Queffurus, Michael, Marin, Jacopo Nicolò, Corvasce, Arianna, Chillarge, Gauri, Mohammed, Mohammed Mustafa, Reid, Rebecca, Gherardi, Dario, Naeem, Awais, Pandanaboyana, Sanjay, Tayeh, Salim, Chevallay, Mickael, Sergeant, Gregory, Cuccomarino, Salvatore, Salimian, Nick, Kapsampelis, Panagiotis, Ferretti, Carlotta, Glasbey, James, Harvitkar, Rafique Umer, Iqbal, Muhammad Rafaih, de Oliveira, Gabriel Paiva, Pérez-Bertólez, Sonia, Bergna, Alessandro, Brisinda, Giuseppe, Rottoli, Matteo, Roscio, Francesco, Pedrazzani, Corrado, Meyer, Jeremy, Marino, Marco V., Brasset, Camille, Daniel, Clerc, Devriendt, Stefanie, Soldini, Gabriele, Pennisi, Damiano, Richards, Chris B., Fiore, Felicia, Bocchino, Antonio, Au, Stephanie, Hernandez-Garcia, Miguel, Frontali, Alice, Grossi, Ugo, Lolis, Evangelos, Miotto, Marco, Di Filippo, Giacomo, Seretis, Charalampos, Barberis, Andrea, De Luca, Raffaele, Levi Sandri, Giovanni Battista, Reitano, Elisa, Mattioli, Marco, Sciaudone, Guido, Fuschillo, Giacomo, Schiltz, Boris, Low, Juin, Bointas, Georgios, Cozza, Valerio, Delaune, Vaihere, Vescio, Francesca, Curcio, Silvia, Sevik, Husnu, Santocchi, Pietro, Stecca, Tommaso, Balaphas, Alexandre, Chessa, Antonella, Leo, Cosimo Alex, di Mola, Fabio F., Tarallo, Mariarita, Martini, Francesco, Lisi, Giorgio, Khan, Mansoor, Nicolazzi, Marco, Pinotti, Enrico, Morini, Andrea, Esposito, Giuseppe, Buonomo, Oreste Claudio, Corallino, Diletta, Demir, Anıl, Roesel, Raffaello, De Lucia, Chiara, Maruccia, Michele, Tekin, Oguzhan, Pavone, Giovanna, Gupta, Ashish, Pradelle, Irene, Chrysikos, Michael, Farrukh, Maira, Baiocchi, Gian Luca, Piras, Carla, Abellán, Antonio Melero, Olivieri, Laura, Materazzo, Marco, Carbone, Ludovico, Dulskas, Audrius, Mulita, Francesk, Corronca, Federico, Cappuccio, Micaela, Smerieri, Elia, Sotiropoulu, Maria, Violante, Tommaso, Moletta, Lucia, Rutegård, Martin, Brillantino, Antonio, Landaluce-Olavarria, Aitor, Ossola, Paolo, Bono, Dario, Rosés, Helena Salvador, Perez-Sanchez, Luis E., Sabbatini, Sonia, Scotti, Mauro Alessandro, Cammarata, Roberto, Ibáñez, Noelia, Marano, Alessandra, Palmisano, Silvia, Cascales-Sanchez, Pedro, Mosca, Vinicio, Ballester, Cristina, Iordache-Petrescu, Madalina Ionela, Pozza, Gioia, Akay, Omer, Bollino, Ruggero, Toti, Johannes M. A., Mascianà, Gianluca, Pach, Radoslaw, Sensi, Bruno, Natalia, Savvala N., Coppola, Alessandro, Altinel, Yuksel, Brucchi, Francesco, Guitart, Marc Pérez, Salido, Andrea Jiménez, Tamini, Nicolò, Garoufalia, Zoe, Mifsut, Patricia, Wilkins, Alex, Navarro-Sánchez, Antonio, Cestaro, Giovanni, Conti, Luigi, Carvas, João M. B., Gazia, Carlo, Alonso, Patricia, Spiezio, Giovanni, Maggi, Giulia, Juloski, Jovan, Braccio, Bartolomeo, Pañella, Clara, Freixa, Celia Caula, Petrakis, Georgios, Folliero, Cristina, De Andrés-Asenjo, Beatriz, Iodice, Alessandra, Jansson, Hannes, González, Tomas Elosua, Ortega, Irene, Castro, Maria J., Fernicola, Agostino, Aparicio, Antonio Carlos Maya, Ortega, Nuria, Chouliaras, Christos, Tura, Marina Vila, Sidiropoulou, Zacharoula, Gonzalez, Ana, Augustin, Goran, Segura-Sampedro, Juan J., Cuk, Vladica, Piccolo, Gaetano, Ingallinella, Sara, Ortenzi, Monica, Uggeri, Fabio, Carrabetta, Salvatore, Tolonen, Matti, Formisano, Giampaolo, Manfredelli, Simone, Perra, Teresa, Esposito, Francesco, Perrone, Gennaro, Zacharis, Georgios, Menéndez, Jaime Iturbe, Bottcher, Sofia Maria Jaume, Ioannidis, Orestis, Borges, Nuno, Sousa, Xavier, Colombari, Renan C., Tellez, Clara, Capolupo, Gabriella Teresa, Giuliani, Giuseppe, Mastella, Federica, González, Lluis García, Merlini, Ilenia, Ghignone, Federico, de Sa, Tiago Correia, Mangana, Orsalia, Rodriguez-Lopez, Mario, Alvarez-Gallego, Mario, Chowdhury, Ashim, Di Lascio, Pierpaolo, Carneros, Virginia Jiménez, Angrisani, Marco, Conte, Luigi E., Montiel, Carmen Galiana, Ascari, Francesca, Dajti, Irida, Lapolla, Pierfrancesco, Sperotto, Beatrice, Mazzarella, Gennaro, Capuano, Marianna, Lopez, Maria Martinez, Ferrario, Luca, Bulte, Joris P., López, María Martínez, Guerci, Claudio, Marra, Angelo Alessandro, Belkacem, Acidi, Pérez, Raquel Escalera, Panyko, Arpád, Dimitrov, Evgeni, Luque, Eduardo J., Manrique, Mario Montes, Paranyak, Mykola, Kaur, Mandeep, Barugola, Giuliano, Farazi-Chongouki, Christos, Estaire-Gómez, Mercedes, del Olmo, Juan Carlos Martín, Nardo, Bruno, Mutlu, Arda Ulaş, Rubio, Ainhoa Valle, Merlini, David A., Marchegiani, Francesco, Cereda, Marco Angelo, Vinci, Danilo, Komaei, Iman, Petrucciani, Niccolo, Seyfried, Steffen, Krsicka, Petr, Medas, Fabio, Lesko, Dusan, Murzi, Valentina, Siragusa, Leandro, Guerrero, María Alejandra, Iranzo, Marina Alarcón, Cestino, Luca, Pasculli, Alessandro, Smerieri, Nazareno, Benzoni, Ilaria, Festa, Federico, Jordão, Daniel Filipe Martins, Licardie, Eugenio, Nicolaescu, Diana C., Balassone, Valerio, La Vaccara, Vincenzo, Romano, Fabrizio, Adamovich, Dmitry Mikhailovich, Papatheodorou, Panayiotis, Maroni, Norvana, Colás-Ruiz, Enrique, Melberga, Liene, Chimenti, Federica, Ferrari, Davide, Arcudi, Claudio, Police, Andrea, De Simone, Belinda, Sánchez-Guillén, Luis, Parreño-Manchado, Felipe Carlos, Rachadell, Juan José, Coletta, Diego, Saroglu, Azize, Pattacini, Gianmaria Casoni, Antonelli, Amedeo, Anania, Marco, Litta, Francesco, Lafranceschina, Stefano, Bottari, Andrea, Pavlovic, Mladen, Rojas-Bonet, Noel, Tampaki, Ekaterini Christina, Kosir, Jurij A., Anelli, Ferdinando M., de las Casas, Sara Gortázar, Kucukarslan, Rabia, Pierobon, Elisa Sefora, Milanesi, Maria, Drogouti, Maria, Sotiropoulou, Maria, Di Marco, Federica, Bannone, Elisa, Sliwinski, Svenja Christin, Yildiz, Ishak, Pellicciaro, Marco, Celotti, Andrea, Malerba, Michele, Marino, Fabio, Bourmpouteli, Eirini, Bianco, Giuseppe, Charitaki, Evgenia, Pascale, Marco Maria, Ioannidis, Argyrios, Maraska, Fatlum, Petagna, Lorenzo, Turri, Giulia, Vailas, Michail, Romanzi, Andrea, Pouwels, Sjaak, Rosa, Fausto, Clocchiatti, Lucrezia, Andreuccetti, Jacopo, Machairas, Nikolaos, Frountzas, Maximos, Lasithiotakis, Konstantinos, Barone, Mirko, Christodoulou, Prokopis, Potkonjak, Dario, Aiolfi, Alberto, de Vries, Hilbert S., Napetti, Sara, Castaldi, Antonio, Botelho, Pedro, Marziali, Irene, Uccelli, Matteo, Pisano, Michele, Veroux, Massimiliano, Locci, Eleonora, Romano, Angela, Cero, Mariagiulia Dal, Cicerchia, Pierfranco Maria, Baldi, Caterina, Russo, Iris Shari, Tenconi, Silvia Maria, Saliu, Fatmir, Bondurri, Andrea, Cardinali, Luca, Laracca, Giovanni Guglielmo, Martín-Pérez, Beatriz, Felsenreich, Daniel M., Cunha, Miguel, Zerbo, Domenico, Clementi, Marco, Delogu, Daniele, Iossa, Angelo, Bavikatte, Akshay Prasannakumar, Saracoglu, Can, Pecorelli, Nicolò, Tufo, Andrea, Biloslavo, Alan, Lianos, Georgios D., Carannante, Filippo, Costanzo, Antonio, Montuori, Mauro, Cigognini, Maria, Silvestro, Roberto, Atici, Semra Demirli, Milito, Pamela, Ferronetti, Antonio, Güngör, Mert, Di Venere, Beatrice, Puccioni, Caterina, De Nobili, Giovanni, Selvaggi, Lucio, Farolfi, Tommaso, Aeschbacher, Pauline, Olivier, James B., Frazzetta, Giuseppe, Andriola, Valeria, Giordano, Alessio, De Luca, Alessandro, Ferrara, Francesco, Casagranda, Biagio, Sammartano, Fabrizio, Russo, Alfio Alessandro, Rossi, Stefano, Pacilli, Mario, Synekidou, Eirini, Tutino, Roberta, Ceresoli, Marco, De Rosa, Michele, Di Santo Albini, Andrea G., Vincenzi, Paolo, Vellei, Samantha, Benzoni, Enrico, Murillo, Gabriela Aracelly Arroyo, Izzo, Giuliano, Scotto, Bruno, Caruso, Riccardo, Colombo, Francesco, D'Acapito, Fabrizio, Lostoridis, Eftychios, Saladino, Edoardo, Poillucci, Gaetano, Moeckli, Beat, Manto, Ottavia, Kara, Yasin, Tatar, Cihad, Cioffi, Stefano Piero Bernardo, Mambrilla, Sara, Bianchi, Valentina, Scopelliti, Michele, Agresta, Ferdinando, Nava, Andrea Kazemi, Franchi, Eloisa, Fransvea, Pietro, Prieto, Mikel, Picardi, Biagio, Rizzuto, Antonia, Panaccio, Paolo, Gussago, Stefano, Marra, Ester, Addeo, Pietro, Fernández Fernández, June, Gulmez, Mehmet, Pisaniello, Donatella, Cannavo, Maurizio, López-López, Victor, Avella, Pasquale, Peloso, Andrea, Bellanova, Giovanni, Candilio, Giuseppe, Perotti, Bruno, Granata, Roberta, Florio, Gaetano, Ioia, Giovanna, Iannone, Immacolata, Ammerata, Giorgio, Zambon, Martina, Romano, Francesco Maria, Del Monte, Simone Rossi, Sasia, Diego, Fortuna, Laura, Giuffrida, Mario, Litvin, Andrey, Cannistra, Marco, De Padua, Cristina, Sánchez, Tatiana Gómez, Paniagua-Garcia-Señorans, Marta, Guevara, Jenny, Perfecto, Arkaitz, Alconchel, Felipe, Campanelli, Michela, Keci, Laura, Cricrì, Michele, Kampouroglou, Georgios, Bagaglini, Giulia, Farrarons, Sara Sentí, Greco, Antonio, Walędziak, Maciej, Carvas, João M., Serrano-Navidad, Monica, Van Doorn, Berend, Schiavo, Ciro, Fabbri, Nicolò, Wani, Ishfaq Ahmad, Mondi, Isabella, Anestiadou, Elissavet, Mendes, Beatriz ISilva, Verdi, Daunia, Dorovinis, Panagiotis, Cacciaguerra, Andrea Benedetti, Caldeira, Beatriz, Canonico, Giuseppe, Dardanov, Dragomir, D'Ugo, Stefano, Francis, Fayez Maged, Meneghini, Simona, Pesce, Antonio, Puglisi, Silvana Bernadetta, Bellini, Maria Irene, Pisano, Marcello, Giordano, Marco, Fleres, Francesco, Campus, Federica, Cillara, Nicola, Moggia, Elisabetta, Ciarleglio, Francesco A., Calini, Giacomo, Gravante, Gianpiero, De Carlis, Riccardo, Altomare, Michele, Martines, Gennaro, Miggino, Marco, Marano, Luigi, Stocco, Alberto, Porcu, Alberto, Pham, Thuy Vy, Gervasi, Maria Clelia, Pilia, Tiziana, Palomba, Giuseppe, Picchetto, Andrea, Spampinato, Marcello Giuseppe, Tandoi, Francesco, Piccoli, Micaela, Gall, Malina ECaraiman, Santos, Bárbara Ribeiro, Agastra, Ervis, Koëter, Tijmen, Samadov, Elgun, Marsanic, Patrizia, Serena, De Fatico Gilda, Uzunoglu, Mustafa Yener, Zanus, Giacomo, Braholli, Eriol, Giovine, Gennaro, Galiffa, Giampaolo, Lauricella, Sara, Lukmonov, Saidrakhim, Leventoglu, Sezai, Chooklin, Serge, Dudi-Venkata, Nagendra N., Gauci, Chahaya M., Podda, M, Di Martino, M, Pata, F, Nigri, G, Pisanu, A, Di Saverio, S, Pellino, G, Ielpo, B, Null, N, Tolla, A, Abdelkhalek, M, Emile, S, Dinagde, T, Bouzid, C, Mansour, A, Garzali, I, Aregawi, A, Zaghloul, T, Kchaou, A, Awad, S, Souadka, A, Ted, T, Saumtally, M, Ahmed, B, Bayileyegn, N, Nunziante, M, Shalaby, M, Debena, D, Zena, A, Adewunmi, O, Negasa, T, Bourguiba, M, Feituri, N, Kebede, K, Elfeki, H, Anas, A, Awad, A, Ermias, N, Hailemariam, D, Bejiga, G, Imana, R, Taffese, A, Feleke, T, Elghadban, H, Debela, B, Shiferaw, D, Tadesse, R, Chukwu, I, Mohammed, A, Hassen, K, Obiagwu, N, Tense, T, Taeme, M, Biniam, E, Tesfay, G, Tegegn, A, Teddy, T, Bekana, B, Nidaw, M, Ali, M, Gonfa, K, Kiros, S, Belay, T, Yallew, G, Wassie, C, 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Giovine, G, Galiffa, G, Lauricella, S, Lukmonov, S, Leventoglu, S, Chooklin, S, Dudi-Venkata, N, Gauci, C, Podda, Mauro, Di Martino, Marcello, Pata, Francesco, Nigri, Giuseppe, Pisanu, Adolfo, Di Saverio, Salomone, Pellino, Gianluca, Ielpo, Benedetto, null, null, Tolla, Ashenafi Negash, Abdelkhalek, Mohamed, Emile, Sameh, Dinagde, Tesfaye Aga, Bouzid, Chafik, Mansour, Ahmed Mohammed Farid Mahmoud, Garzali, Ibrahim Umar, Aregawi, Alazar Berhe, Zaghloul, Tarek M., Kchaou, Ali, Awad, Selmy S., Souadka, Amine, Ted, Tedla Gebretsadik, Saumtally, Mohammad Saad, Ahmed, Bensaad, Bayileyegn, Nebiyou Simegnew, Nunziante, Marco, Shalaby, Mostafa, Debena, Dawit Gebregiorgis, Zena, Alemayehu Shanko, Adewunmi, Olayinka Lukman, Negasa, Tolera A., Bourguiba, Mohamed Aboulkacem, Feituri, Nura, Kebede, Kirubel Abebe, Elfeki, Hossam, Anas, Abdelhmed, Awad, Ahmed K., Ermias, Nebiyou, Hailemariam, Dagnachew H., Bejiga, Gosa Hundie, Imana, Ruhama Yoseph, Taffese, Abebe, Feleke, Tsega Terefe, Elghadban, Hosam Mohamed, Debela, Bizuneh Sime, Shiferaw, Desta, Tadesse, Robel, Chukwu, Isaac Sunday, Mohammed, Abdullahi Ibrahim, Hassen, Khalid Arebo, Obiagwu, Ndubuisi K., Tense, Tadesse H., Taeme, Mulugeta, Biniam, Ewnte, Tesfay, Goytom Knfe, Tegegn, Ayenachew Getachew, Teddy, Tewodros Abule Bilata, Bekana, Bekana L., Nidaw, Melkamu Kibret, Ali, Mahmoud Ibrahim, Gonfa, Kebebe Bekele, Kiros, Samuel, Belay, Tatek, Yallew, Gebeyaw Mengist, Wassie, Chekol, Ayalew, Alem Mekete, Asfaw, Fitsum Terefe, Aimal, Aimal Khan, Casas, Maria Agustina, Madrid, Fausto A., Diaz-Elizondo, Jose Antonio, Merlo, Ignacio Guillermo, De Campos, Tercio, Schlottmann, Francisco, Gomes, Carlos Augusto, Hernández, Edgard Efrén Lozada, Moncada-Ortega, Augusto, Ramos-De la Medina, Antonio, Vanerio, Patricio, Morales, Emilio J., Stringfield, Sarah Beth, Gallardo, Cristian, Fonseca, Vinicius Cordeiro, Muriel, Maria Emilia, Cantarino, Frederico, Fichera, Alessandro, Rodriguez, Agustin E., Salinas, Roberto Paúl Andrade, Crosbie, Gonzalo Gabriel, Menegozzo, Carlos Augusto Metidieri, Avellaneda, Nicolas, Briones, Cristhian Gonzalo Aspiazu, Varela, Cristopher, Lichliter, Warren E., Varela, Cristopher L., Koppel, Darren, Lenz, Jorge Godoy, Pascual, Franco, Sibaja-Matamoros, Dauber A., Johnson, Benjamin E., Mercado, Octavio Avila, Tita, Agustín, Mukherjee, Indraneil, Lorenzo, Irving, Rueda, Erick, Rico, Douglas, Terwes, Natasha Loria, Visag-Castillo, Victor, Escalante, Karol S., Salvador, Alan Francisco Alfaro, Pio, Luca, Rodas, Edgar B., Aguilar, Juan Carlos Cardozo, Neri, Ignacio, Barzola, Ernesto J., Barba, Leonardo A., Zuchini, Andrés Mendoza, Acevedo, Ana Karen Radilla, Gachabayov, Mahir, Gonsaga, Ricardo Alessandro Teixeira, Bonilla, Fernando, Knickerbocker, Chase Barrett, Tsouknidas, Ioannis, Salamea, Juan C., Travers, Lawrence Albert Salter, Nari, Gustavo Adrian, Pachajoa, Diana Alejandra Pantoja, Valadez, Michel Hernandez, Hale, Lyman Lansing, Perez, Guillermo, Choudhry, Asad, Foreman, Michaael L., Brito, Ismael, Ciro, Mauricio Pedraza, Newton, Carla Joyce, Souza, Hamilton Petry, Davis, Daniel G., Ferreira, Rodrigo Vaz, Keller, Deborah S., Miguel, Gustavo Machain, Singh-Ranger, Gurpreet, Linares, Neiling Massiel Oviedo, Singares, Eduardo Smith, Valdivieso, Xavier HGarcía, Teran, Alfonso Ivan Sanchez, Vargas, Luis Felipe Cabrera, Valinoti, Agustín, Milne, David M., Fleming, Andrew Martin, Quiroga-Garza, Alejandro, Espino, Eduardo Morales, Bedros, Nicole Mary, Funk, Geoffrey A., Neves, Fernanda V. S., Supit, Tommy, Baba, Arshad Ahmed, Chalkoo, Mushtaq A., Kucuk, Gultekin Ozan, Sarmiento, Ray Inocencio, Galeev, Shamil I., Korkoman, Mohammed J., Yang, Wah, Medappil, Noushif, Athar, Rahmatullah, Subramaniam, Ravichandran, Chia, Chi Fung, Alhazmi, Ahmad, Halder, Subhadip, Rusli, Siti Mayuha, Rashid, Arshad, Gülcü, Barış, Nagarajan, Prasanth, Rida, Khaled, Jamiri, Al-Radjid, Batıkan, Oğuzkağan, Khan, Huma Ahmed, Mitul, Ashrarur Rahman, Efetov, Sergey, Junior, Marcelo A. F. Ribeiro, Gulcu, Baris, Farooqui, Marryam Riaz, Mulpuri, Venu Bhargava, Bagaria, Dinesh, Yusoff, Ahmad Ramzi, Wani, Rauf, Younis, Muhammad Umar, Khobragade, Krunal H., Marwat, Muhammad Ibrahim, Bains, Lovenish, Kobe, Yoshiro, Koh, Peng Soon, Tantravahi, Umasankar, Mohamad Mohamad, Ikhwan Sani, Abu-Arish, Hamdoon, Yildirim, Ali Cihat, Ibrahim, Aini Fahriza, Tan, Jih Huei, Siagian, Dumaria Ketty, Bhattacharya, Neela, Chiu, Jennifer H. F., Paramasvaran, Ganendra, Voon, Kelvin, Göktepe, Berk, Lee, Lee Yeong Sing, Gupta, Amit, Rasheed, Faaiz, Al-Shehari, Mohammed, Syed, Syed Muhammad Ali, Bhat, Pawan Singh, Erdoğan, Emre, Roat, Rajesh, Nacion, Aeris Jane D., Saraiya, Swapnil Mukesh, Afolabi, Akinwale Ibrahim, Chai, Feng Yih, Ghannam, Wagih, Bhattacharya, Kaushik, NL, Harish, Aloun, Ali, Bhatti, Hamza Waqar, Koneti, Akshadhar J., Klib, Mohamad, Qureshi, Ahmad Uzair, Syn, Nicholas L., Wani, Ajaz, Saeidi, Sara, Zeb, Muhammad, Bandaru, Kalyan Vijay Kumar, Menna, Maria Paola, Morales-Conde, Salvador, Gessa, Emanuela, Sánchez-Cabús, Santiago, Spartalis, Eleftherios, Antropoli, Carmine, Manigrasso, Michele, Sica, Giuseppe S., Ercolani, Giorgio, Chitul, Andrei, Bacchiocchi, Giulia, Azevedo, José, Karamarkovic, Aleksandar, Bonavina, Luigi, Piozzi, Guglielmo N., Migueláñez, Isabel Pascual, Merlini, David, Major, Piotr, Grimaldi, Luciano, Calu, Valentin, Curro, Giuseppe, Cotsoglou, Christian, Baldini, Edoardo, Delis, Spiros, Kovacevic, Bojan, Masetti, Michele, Selvaggi, Francesco, Scabini, Stefano, Reiti, Andrian, Zullo, Alessia, Giuliani, Antonio, Alesina, Pier Francesco, Massey, Lisa H., Slesser, Alistair A. P., Neary, Peter M., Sahnan, Kapil, Tan, Jessica J., Colucci, Gianluca, Brady, Richard R. W., Mihailescu, Andrei, Adamina, Michel, Gerogiannis, Ioannis, van Ramshorst, Gabrielle, Paradiso, Giulia, Poto, Gianmario Edoardo, Massaro, Daniele, Nazir, Fozia, Stubbs, Benjamin M., Tasselli, Francesco Menegon, Muñoz-Cruzado, Virginia Durán, Sabia, Domenico, Vannelli, Alberto, Marsella, Valentina Enrica, Tomada, Elisa Paoluzzi, Giambusso, Mauro, Davies, Justin, Uzzau, Alessandro, Balla, Andrea, Scaringi, Stefano, Lancellotti, Francesco, Douka, Eleftheria, Argenio, Giulio, Cassese, Gianluca, Ammendola, Michele, Morelli, Luca, Francone, Elisa, Bala, Miklosh, Thambi, Prem, Iacobone, Maurizio, Campisi, Andrea, Tejedor, Patricia, Spoletini, Gabriele, Mascherini, Matteo, Belia, Francesco, Idiz, Ufuk Oguz, Colak, Elif, Peters, Paul Adewunmi, Ros, Emilio Peña, Aytac, Erman, Vilallonga, Ramon, Serrablo, Alejandro, Muttillo, Edoardo Maria, Di Franco, Gregorio, Vanni, Gianluca, Isik, Arda, Sbacco, Valentina, Tropeano, Francesca Paola, Porcellini, Iride, Butler, Rebecca Jayne, Fernandez, Carmen Cagigas, Papadopoulos, Aristeidis, Salvans, Silvia, Khan, Jan Sher, Bellver, Pedro Palazón, Mc Farlane, Sebastian Jeri, Apostolou, Konstantinos, Tur-Martinez, Jaume, Castellano, Javier Rivera, Santoliquido, Matteo, Tallon-Aguilar, Luis, Celentano, Valerio, Aliyev, Vusal, al-Najami, Issam, Grama, Florin A., Masior, Łukasz, Ciesielski, Wojciech J., Luberto, Antonio, Sparavigna, Marco, Klimczak, Tomasz Jerzy, Negoi, Ionut, Serradilla-Martín, Mario, Marinis, Athanasios, Cammarat, Roberto, Bellido-luque, Juan, Manzo, Carlo Alberto, Milana, Flavio, Luglio, Gaetano, Zarnescu, Narcis Octavian, Martínez, Isidro, Olmi, Stefano, Costea, Radu V., Cerdán-Santacruz, Carlos, Gica, Nicolae, Rompianesi, Gianluca, Gallo, Gaetano, Ridolfi, Cristina, Sahid, Saidah, CC, Tommaso, López-Soler, Guillermo, Díaz, Carlos JGómez, Mccawley, Niamh, Luzzi, Andrea Pierre, Abelló, David, Bonito, Alba Correa, Ntomi, Vasileia, Gourgiotis, Stavros, Pazos, Natalia Suárez, Toscano, Marta Jiménez, Zafra, David Ambrona, Beisani, Marc, Oliva, Alba, Guler, Mert, Gómez, Marta Jiménez, Oddis, Lidia, Montcusí, Blanca, Delgado, Ander Timoteo, Lasarte, Mateusz PJęckowski Aingeru Sarriuga, Antonacci, Nicola, Sartori, Alberto, Taylor, John Vincent, de Santos Iglesias, Francisco Juan, Mastronardi, Manuela, Gunay, Emre, Yiu, Andrew, Cano-Valderrama, Oscar, Costantini, Giulia, Digne-Malcolm, Holly Jane, Petropoulou, Thalia, Horesh, Nir, Kelly, Michael E., Ahmed, Nauman, Wyroslak-Najs, Justyna, Naik, Prashant, Vigorita, Vincenzo, Michael, Michael, Castro, Ernest, Paspala, Anna, D'Ambrosio, Marco, Pangeni, Anang, Dziakova, Jana, Terés, Lara Blanco, Lorente-Poch, Leyre, Di Carlo, Isidoro, Spartalis, Michael, Moro-Valdezate, David, Davey, Matthew G., Turrado-Rodriguez, Victor, Tryliskyy, Yegor, Calussi, Marco, Farré, Silvia Pérez, Labat, Miriam Cazador, Marafante, Chiara, Takkenberg, Marijn, Brookes, Charlotte Elisabeth, Soares, Antonio S., Gialamas, Eleftherios, Caputo, Damiano, Corrons, Laia Codina, Capitano, Sante, Charalabopoulos, Alexandros, Don, Cristine Brooke Pathirannehalage, Marrano, Enrico, Giuffrida, Maria Carmela, Tomasicchio, Giovanni, Bellato, Vittoria, Stijns, Jasper, Creavin, Ben, Schizas, Dimitrios, Blanco-Antona, Francisco, Kykalos, Stylianos, Tartaglia, Nicola, Pelegrina, Amalia, Barranquero, Alberto G., Schena, Carlo Alberto, Cremona, Simone, Baili, Efstratia, Cianci, Pasquale, Di Bella, Annamaria, Forcignanò, Edoardo, Fabbrizio, Tiziana, Salvetti, Francesco, Inama, Marco, Campagnaro, Tommaso, Deerenberg, Eva B., Reccia, Isabella, Rocca, Aldo, Fazio, Federico, Tampakis, Athanasios, Tepelenis, Kostas, Di Meo, Giovanna, Konstantoudakis, Georgios, Manatakis, Dimitrios K., Mineccia, Michela, Delvecchio, Antonella, Faro, Carmelo Lo, Rosso, Edoardo, Bandyopadhyay, Samik K., Queffurus, Michael, Marin, Jacopo Nicolò, Corvasce, Arianna, Chillarge, Gauri, Mohammed, Mohammed Mustafa, Reid, Rebecca, Gherardi, Dario, Naeem, Awais, Pandanaboyana, Sanjay, Tayeh, Salim, Chevallay, Mickael, Sergeant, Gregory, Cuccomarino, Salvatore, Salimian, Nick, Kapsampelis, Panagiotis, Ferretti, Carlotta, Glasbey, James, Harvitkar, Rafique Umer, Iqbal, Muhammad Rafaih, de Oliveira, Gabriel Paiva, Pérez-Bertólez, Sonia, Bergna, Alessandro, Brisinda, Giuseppe, Rottoli, Matteo, Roscio, Francesco, Pedrazzani, Corrado, Meyer, Jeremy, Marino, Marco V., Brasset, Camille, Daniel, Clerc, Devriendt, Stefanie, Soldini, Gabriele, Pennisi, Damiano, Richards, Chris B., Fiore, Felicia, Bocchino, Antonio, Au, Stephanie, Hernandez-Garcia, Miguel, Frontali, Alice, Grossi, Ugo, Lolis, Evangelos, Miotto, Marco, Di Filippo, Giacomo, Seretis, Charalampos, Barberis, Andrea, De Luca, Raffaele, Levi Sandri, Giovanni Battista, Reitano, Elisa, Mattioli, Marco, Sciaudone, Guido, Fuschillo, Giacomo, Schiltz, Boris, Low, Juin, Bointas, Georgios, Cozza, Valerio, Delaune, Vaihere, Vescio, Francesca, Curcio, Silvia, Sevik, Husnu, Santocchi, Pietro, Stecca, Tommaso, Balaphas, Alexandre, Chessa, Antonella, Leo, Cosimo Alex, di Mola, Fabio F., Tarallo, Mariarita, Martini, Francesco, Lisi, Giorgio, Khan, Mansoor, Nicolazzi, Marco, Pinotti, Enrico, Morini, Andrea, Esposito, Giuseppe, Buonomo, Oreste Claudio, Corallino, Diletta, Demir, Anıl, Roesel, Raffaello, De Lucia, Chiara, Maruccia, Michele, Tekin, Oguzhan, Pavone, Giovanna, Gupta, Ashish, Pradelle, Irene, Chrysikos, Michael, Farrukh, Maira, Baiocchi, Gian Luca, Piras, Carla, Abellán, Antonio Melero, Olivieri, Laura, Materazzo, Marco, Carbone, Ludovico, Dulskas, Audrius, Mulita, Francesk, Corronca, Federico, Cappuccio, Micaela, Smerieri, Elia, Sotiropoulu, Maria, Violante, Tommaso, Moletta, Lucia, Rutegård, Martin, Brillantino, Antonio, Landaluce-Olavarria, Aitor, Ossola, Paolo, Bono, Dario, Rosés, Helena Salvador, Perez-Sanchez, Luis E., Sabbatini, Sonia, Scotti, Mauro Alessandro, Cammarata, Roberto, Ibáñez, Noelia, Marano, Alessandra, Palmisano, Silvia, Cascales-Sanchez, Pedro, Mosca, Vinicio, Ballester, Cristina, Iordache-Petrescu, Madalina Ionela, Pozza, Gioia, Akay, Omer, Bollino, Ruggero, Toti, Johannes M. A., Mascianà, Gianluca, Pach, Radoslaw, Sensi, Bruno, Natalia, Savvala N., Coppola, Alessandro, Altinel, Yuksel, Brucchi, Francesco, Guitart, Marc Pérez, Salido, Andrea Jiménez, Tamini, Nicolò, Garoufalia, Zoe, Mifsut, Patricia, Wilkins, Alex, Navarro-Sánchez, Antonio, Cestaro, Giovanni, Conti, Luigi, Carvas, João M. B., Gazia, Carlo, Alonso, Patricia, Spiezio, Giovanni, Maggi, Giulia, Juloski, Jovan, Braccio, Bartolomeo, Pañella, Clara, Freixa, Celia Caula, Petrakis, Georgios, Folliero, Cristina, De Andrés-Asenjo, Beatriz, Iodice, Alessandra, Jansson, Hannes, González, Tomas Elosua, Ortega, Irene, Castro, Maria J., Fernicola, Agostino, Aparicio, Antonio Carlos Maya, Ortega, Nuria, Chouliaras, Christos, Tura, Marina Vila, Sidiropoulou, Zacharoula, Gonzalez, Ana, Augustin, Goran, Segura-Sampedro, Juan J., Cuk, Vladica, Piccolo, Gaetano, Ingallinella, Sara, Ortenzi, Monica, Uggeri, Fabio, Carrabetta, Salvatore, Tolonen, Matti, Formisano, Giampaolo, Manfredelli, Simone, Perra, Teresa, Esposito, Francesco, Perrone, Gennaro, Zacharis, Georgios, Menéndez, Jaime Iturbe, Bottcher, Sofia Maria Jaume, Ioannidis, Orestis, Borges, Nuno, Sousa, Xavier, Colombari, Renan C., Tellez, Clara, Capolupo, Gabriella Teresa, Giuliani, Giuseppe, Mastella, Federica, González, Lluis García, Merlini, Ilenia, Ghignone, Federico, de Sa, Tiago Correia, Mangana, Orsalia, Rodriguez-Lopez, Mario, Alvarez-Gallego, Mario, Chowdhury, Ashim, Di Lascio, Pierpaolo, Carneros, Virginia Jiménez, Angrisani, Marco, Conte, Luigi E., Montiel, Carmen Galiana, Ascari, Francesca, Dajti, Irida, Lapolla, Pierfrancesco, Sperotto, Beatrice, Mazzarella, Gennaro, Capuano, Marianna, Lopez, Maria Martinez, Ferrario, Luca, Bulte, Joris P., López, María Martínez, Guerci, Claudio, Marra, Angelo Alessandro, Belkacem, Acidi, Pérez, Raquel Escalera, Panyko, Arpád, Dimitrov, Evgeni, Luque, Eduardo J., Manrique, Mario Montes, Paranyak, Mykola, Kaur, Mandeep, Barugola, Giuliano, Farazi-Chongouki, Christos, Estaire-Gómez, Mercedes, del Olmo, Juan Carlos Martín, Nardo, Bruno, Mutlu, Arda Ulaş, Rubio, Ainhoa Valle, Merlini, David A., Marchegiani, Francesco, Cereda, Marco Angelo, Vinci, Danilo, Komaei, Iman, Petrucciani, Niccolo, Seyfried, Steffen, Krsicka, Petr, Medas, Fabio, Lesko, Dusan, Murzi, Valentina, Siragusa, Leandro, Guerrero, María Alejandra, Iranzo, Marina Alarcón, Cestino, Luca, Pasculli, Alessandro, Smerieri, Nazareno, Benzoni, Ilaria, Festa, Federico, Jordão, Daniel Filipe Martins, Licardie, Eugenio, Nicolaescu, Diana C., Balassone, Valerio, La Vaccara, Vincenzo, Romano, Fabrizio, Adamovich, Dmitry Mikhailovich, Papatheodorou, Panayiotis, Maroni, Norvana, Colás-Ruiz, Enrique, Melberga, Liene, Chimenti, Federica, Ferrari, Davide, Arcudi, Claudio, Police, Andrea, De Simone, Belinda, Sánchez-Guillén, Luis, Parreño-Manchado, Felipe Carlos, Rachadell, Juan José, Coletta, Diego, Saroglu, Azize, Pattacini, Gianmaria Casoni, Antonelli, Amedeo, Anania, Marco, Litta, Francesco, Lafranceschina, Stefano, Bottari, Andrea, Pavlovic, Mladen, Rojas-Bonet, Noel, Tampaki, Ekaterini Christina, Kosir, Jurij A., Anelli, Ferdinando M., de las Casas, Sara Gortázar, Kucukarslan, Rabia, Pierobon, Elisa Sefora, Milanesi, Maria, Drogouti, Maria, Sotiropoulou, Maria, Di Marco, Federica, Bannone, Elisa, Sliwinski, Svenja Christin, Yildiz, Ishak, Pellicciaro, Marco, Celotti, Andrea, Malerba, Michele, Marino, Fabio, Bourmpouteli, Eirini, Bianco, Giuseppe, Charitaki, Evgenia, Pascale, Marco Maria, Ioannidis, Argyrios, Maraska, Fatlum, Petagna, Lorenzo, Turri, Giulia, Vailas, Michail, Romanzi, Andrea, Pouwels, Sjaak, Rosa, Fausto, Clocchiatti, Lucrezia, Andreuccetti, Jacopo, Machairas, Nikolaos, Frountzas, Maximos, Lasithiotakis, Konstantinos, Barone, Mirko, Christodoulou, Prokopis, Potkonjak, Dario, Aiolfi, Alberto, de Vries, Hilbert S., Napetti, Sara, Castaldi, Antonio, Botelho, Pedro, Marziali, Irene, Uccelli, Matteo, Pisano, Michele, Veroux, Massimiliano, Locci, Eleonora, Romano, Angela, Cero, Mariagiulia Dal, Cicerchia, Pierfranco Maria, Baldi, Caterina, Russo, Iris Shari, Tenconi, Silvia Maria, Saliu, Fatmir, Bondurri, Andrea, Cardinali, Luca, Laracca, Giovanni Guglielmo, Martín-Pérez, Beatriz, Felsenreich, Daniel M., Cunha, Miguel, Zerbo, Domenico, Clementi, Marco, Delogu, Daniele, Iossa, Angelo, Bavikatte, Akshay Prasannakumar, Saracoglu, Can, Pecorelli, Nicolò, Tufo, Andrea, Biloslavo, Alan, Lianos, Georgios D., Carannante, Filippo, Costanzo, Antonio, Montuori, Mauro, Cigognini, Maria, Silvestro, Roberto, Atici, Semra Demirli, Milito, Pamela, Ferronetti, Antonio, Güngör, Mert, Di Venere, Beatrice, Puccioni, Caterina, De Nobili, Giovanni, Selvaggi, Lucio, Farolfi, Tommaso, Aeschbacher, Pauline, Olivier, James B., Frazzetta, Giuseppe, Andriola, Valeria, Giordano, Alessio, De Luca, Alessandro, Ferrara, Francesco, Casagranda, Biagio, Sammartano, Fabrizio, Russo, Alfio Alessandro, Rossi, Stefano, Pacilli, Mario, Synekidou, Eirini, Tutino, Roberta, Ceresoli, Marco, De Rosa, Michele, Di Santo Albini, Andrea G., Vincenzi, Paolo, Vellei, Samantha, Benzoni, Enrico, Murillo, Gabriela Aracelly Arroyo, Izzo, Giuliano, Scotto, Bruno, Caruso, Riccardo, Colombo, Francesco, D'Acapito, Fabrizio, Lostoridis, Eftychios, Saladino, Edoardo, Poillucci, Gaetano, Moeckli, Beat, Manto, Ottavia, Kara, Yasin, Tatar, Cihad, Cioffi, Stefano Piero Bernardo, Mambrilla, Sara, Bianchi, Valentina, Scopelliti, Michele, Agresta, Ferdinando, Nava, Andrea Kazemi, Franchi, Eloisa, Fransvea, Pietro, Prieto, Mikel, Picardi, Biagio, Rizzuto, Antonia, Panaccio, Paolo, Gussago, Stefano, Marra, Ester, Addeo, Pietro, Fernández Fernández, June, Gulmez, Mehmet, Pisaniello, Donatella, Cannavo, Maurizio, López-López, Victor, Avella, Pasquale, Peloso, Andrea, Bellanova, Giovanni, Candilio, Giuseppe, Perotti, Bruno, Granata, Roberta, Florio, Gaetano, Ioia, Giovanna, Iannone, Immacolata, Ammerata, Giorgio, Zambon, Martina, Romano, Francesco Maria, Del Monte, Simone Rossi, Sasia, Diego, Fortuna, Laura, Giuffrida, Mario, Litvin, Andrey, Cannistra, Marco, De Padua, Cristina, Sánchez, Tatiana Gómez, Paniagua-Garcia-Señorans, Marta, Guevara, Jenny, Perfecto, Arkaitz, Alconchel, Felipe, Campanelli, Michela, Keci, Laura, Cricrì, Michele, Kampouroglou, Georgios, Bagaglini, Giulia, Farrarons, Sara Sentí, Greco, Antonio, Walędziak, Maciej, Carvas, João M., Serrano-Navidad, Monica, Van Doorn, Berend, Schiavo, Ciro, Fabbri, Nicolò, Wani, Ishfaq Ahmad, Mondi, Isabella, Anestiadou, Elissavet, Mendes, Beatriz ISilva, Verdi, Daunia, Dorovinis, Panagiotis, Cacciaguerra, Andrea Benedetti, Caldeira, Beatriz, Canonico, Giuseppe, Dardanov, Dragomir, D'Ugo, Stefano, Francis, Fayez Maged, Meneghini, Simona, Pesce, Antonio, Puglisi, Silvana Bernadetta, Bellini, Maria Irene, Pisano, Marcello, Giordano, Marco, Fleres, Francesco, Campus, Federica, Cillara, Nicola, Moggia, Elisabetta, Ciarleglio, Francesco A., Calini, Giacomo, Gravante, Gianpiero, De Carlis, Riccardo, Altomare, Michele, Martines, Gennaro, Miggino, Marco, Marano, Luigi, Stocco, Alberto, Porcu, Alberto, Pham, Thuy Vy, Gervasi, Maria Clelia, Pilia, Tiziana, Palomba, Giuseppe, Picchetto, Andrea, Spampinato, Marcello Giuseppe, Tandoi, Francesco, Piccoli, Micaela, Gall, Malina ECaraiman, Santos, Bárbara Ribeiro, Agastra, Ervis, Koëter, Tijmen, Samadov, Elgun, Marsanic, Patrizia, Serena, De Fatico Gilda, Uzunoglu, Mustafa Yener, Zanus, Giacomo, Braholli, Eriol, Giovine, Gennaro, Galiffa, Giampaolo, Lauricella, Sara, Lukmonov, Saidrakhim, Leventoglu, Sezai, Chooklin, Serge, Dudi-Venkata, Nagendra N., and Gauci, Chahaya M.
- Abstract
The workload of general surgeons is multifaceted, encompassing not only surgical procedures but also a myriad of other responsibilities. From April to May 2023, we conducted a CHERRIES-compliant internet-based survey analyzing clinical practice, academic engagement, and post-on-call rest. The questionnaire featured six sections with 35 questions. Statistical analysis used Chi-square tests, ANOVA, and logistic regression (SPSS (R) v. 28). The survey received a total of 1.046 responses (65.4%). Over 78.0% of responders came from Europe, 65.1% came from a general surgery unit; 92.8% of European and 87.5% of North American respondents were involved in research, compared to 71.7% in Africa. Europe led in publishing research studies (6.6 +/- 8.6 yearly). Teaching involvement was high in North America (100%) and Africa (91.7%). Surgeons reported an average of 6.7 +/- 4.9 on-call shifts per month, with European and North American surgeons experiencing 6.5 +/- 4.9 and 7.8 +/- 4.1 on-calls monthly, respectively. African surgeons had the highest on-call frequency (8.7 +/- 6.1). Post-on-call, only 35.1% of respondents received a day off. Europeans were most likely (40%) to have a day off, while African surgeons were least likely (6.7%). On the adjusted multivariable analysis HDI (Human Development Index) (aOR 1.993) hospital capacity > 400 beds (aOR 2.423), working in a specialty surgery unit (aOR 2.087), and making the on-call in-house (aOR 5.446), significantly predicted the likelihood of having a day off after an on-call shift. Our study revealed critical insights into the disparities in workload, access to research, and professional opportunities for surgeons across different continents, underscored by the HDI.
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- 2024
10. Widespread exposure to SARS-CoV-2 in wildlife communities
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Goldberg, Amanda R., Langwig, Kate E., Brown, Katherine L., Marano, Jeffrey M., Rai, Pallavi, King, Kelsie M., Sharp, Amanda K., Ceci, Alessandro, Kailing, Christopher D., Kailing, Macy J., Briggs, Russell, Urbano, Matthew G., Roby, Clinton, Brown, Anne M., Weger-Lucarelli, James, Finkielstein, Carla V., Hoyt, Joseph R., Goldberg, Amanda R., Langwig, Kate E., Brown, Katherine L., Marano, Jeffrey M., Rai, Pallavi, King, Kelsie M., Sharp, Amanda K., Ceci, Alessandro, Kailing, Christopher D., Kailing, Macy J., Briggs, Russell, Urbano, Matthew G., Roby, Clinton, Brown, Anne M., Weger-Lucarelli, James, Finkielstein, Carla V., and Hoyt, Joseph R.
- Abstract
Pervasive SARS-CoV-2 infections in humans have led to multiple transmission events to animals. While SARS-CoV-2 has a potential broad wildlife host range, most documented infections have been in captive animals and a single wildlife species, the white-tailed deer. The full extent of SARS-CoV-2 exposure among wildlife communities and the factors that influence wildlife transmission risk remain unknown. We sampled 23 species of wildlife for SARS-CoV-2 and examined the effects of urbanization and human use on seropositivity. Here, we document positive detections of SARS-CoV-2 RNA in six species, including the deer mouse, Virginia opossum, raccoon, groundhog, Eastern cottontail, and Eastern red bat between May 2022–September 2023 across Virginia and Washington, D.C., USA. In addition, we found that sites with high human activity had three times higher seroprevalence than low human-use areas. We obtained SARS-CoV-2 genomic sequences from nine individuals of six species which were assigned to seven Pango lineages of the Omicron variant. The close match to variants circulating in humans at the time suggests at least seven recent human-to-animal transmission events. Our data support that exposure to SARS-CoV-2 has been widespread in wildlife communities and suggests that areas with high human activity may serve as points of contact for cross-species transmission.
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- 2024
11. Malware detection with artificial intelligence: A systematic literature review
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Gaber, Matthew G., Ahmed, Mohiuddin, Janicke, Helge, Gaber, Matthew G., Ahmed, Mohiuddin, and Janicke, Helge
- Abstract
In this survey, we review the key developments in the field of malware detection using AI and analyze core challenges. We systematically survey state-of-the-art methods across five critical aspects of building an accurate and robust AI-powered malware-detection model: malware sophistication, analysis techniques, malware repositories, feature selection, and machine learning vs. deep learning. The effectiveness of an AI model is dependent on the quality of the features it is trained with. In turn, the quality and authenticity of these features is dependent on the quality of the dataset and the suitability of the analysis tool. Static analysis is fast but is limited by the widespread use of obfuscation. Dynamic analysis is not impacted by obfuscation but is defeated by ubiquitous anti-analysis techniques and requires more computational power. Sophisticated and evasive malware is challenging to extract authentic discriminatory features from and, combined with poor quality datasets, this can lead to a situation where a model achieves high accuracy with only one specific dataset.
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- 2024
12. The association between lateral hip muscle size/intramuscular fat infiltration and hip strength in active young adults with long standing hip/groin pain
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Perraton, Zuzana, Mosler, Andrea B., Lawrenson, Peter R., Weber II, Kenneth, Elliott, James M., Wesselink, Evert O., Crossley, Kay M., Kemp, Joanne L., Stewart, Christopher, Girdwood, Michael, King, Matthew G., Heerey, Joshua J., Scholes, Mark J., Mentiplay, Benjamin F., Semciw, Adam I., Perraton, Zuzana, Mosler, Andrea B., Lawrenson, Peter R., Weber II, Kenneth, Elliott, James M., Wesselink, Evert O., Crossley, Kay M., Kemp, Joanne L., Stewart, Christopher, Girdwood, Michael, King, Matthew G., Heerey, Joshua J., Scholes, Mark J., Mentiplay, Benjamin F., and Semciw, Adam I.
- Abstract
Objectives: To investigate associations between lateral hip muscle size/intramuscular fat infiltration (MFI) and hip strength in active young adults with longstanding hip/groin pain. Design: Cross-sectional study. Setting: University/Clinical. Participants: Sub-elite soccer and Australian Football players (n = 180; 37 female) with long standing hip/groin pain. Main outcome measures: Muscle size (volume) and MFI of gluteus maximus, medius, and minimis, and tensor fascia latae (TFL) were assessed using magnetic resonance imaging. Isometric hip strength was measured with handheld dynamometry. Associations between muscle size/MFI were assessed using linear regression models, adjusted for body mass index and age, with sex-specific interactions. Results: Positive associations were identified between lateral hip muscle volume and hip muscle strength, particularly for gluteus maximus and gluteus minimus volume. For all muscles, hip abduction was associated with an increase in strength by up to 0.69 N (R2 ranging from 0.29 to 0.39). These relationships were consistent across sexes with no sex interactions observed. No associations were found between MFI and strength measures. Conclusion: Greater lateral hip muscle volumes are associated with greater hip strength in active young adults with long standing hip/groin pain, irrespective of sex. Gluteus maximus and minimus volume showed the most consistent relationships with hip strength across multiple directions.
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- 2024
13. Image-based multiplex immune profiling of cancer tissues: translational implications. A report of the International Immuno-oncology Biomarker Working Group on Breast Cancer
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Pathologie, Cancer, Jahangir, Chowdhury Arif, Page, David B., Broeckx, Glenn, Gonzalez, Claudia A., Burke, Caoimbhe, Murphy, Clodagh, Reis-Filho, Jorge S., Ly, Amy, Harms, Paul W., Gupta, Rajarsi R., Vieth, Michael, Hida, Akira I., Kahila, Mohamed, Kos, Zuzana, van Diest, Paul J., Verbandt, Sara, Thagaard, Jeppe, Khiroya, Reena, Abduljabbar, Khalid, Acosta Haab, Gabriela, Acs, Balazs, Adams, Sylvia, Almeida, Jonas S., Alvarado-Cabrero, Isabel, Azmoudeh-Ardalan, Farid, Badve, Sunil, Baharun, Nurkhairul Bariyah, Bellolio, Enrique R., Bheemaraju, Vydehi, Blenman, Kim R.M., Botinelly Mendonça Fujimoto, Luciana, Burgues, Octavio, Chardas, Alexandros, Cheang, Maggie Chon U., Ciompi, Francesco, Cooper, Lee A.D., Coosemans, An, Corredor, Germán, Dantas Portela, Flavio Luis, Deman, Frederik, Demaria, Sandra, Dudgeon, Sarah N., Elghazawy, Mahmoud, Fernandez-Martín, Claudio, Fineberg, Susan, Fox, Stephen B., Giltnane, Jennifer M., Gnjatic, Sacha, Gonzalez-Ericsson, Paula I., Grigoriadis, Anita, Halama, Niels, Hanna, Matthew G., Harbhajanka, Aparna, Hart, Steven N., Hartman, Johan, Hewitt, Stephen, Horlings, Hugo M., Husain, Zaheed, Irshad, Sheeba, Janssen, Emiel A.M., Kataoka, Tatsuki R., Kawaguchi, Kosuke, Khramtsov, Andrey I., Kiraz, Umay, Kirtani, Pawan, Kodach, Liudmila L., Korski, Konstanty, Akturk, Guray, Scott, Ely, Kovács, Anikó, Lænkholm, Anne Vibeke, Lang-Schwarz, Corinna, Larsimont, Denis, Lennerz, Jochen K., Lerousseau, Marvin, Li, Xiaoxian, Madabhushi, Anant, Maley, Sai K., Manur Narasimhamurthy, Vidya, Marks, Douglas K., McDonald, Elizabeth S., Mehrotra, Ravi, Michiels, Stefan, Kharidehal, Durga, Minhas, Fayyaz ul Amir Afsar, Mittal, Shachi, Moore, David A., Mushtaq, Shamim, Nighat, Hussain, Papathomas, Thomas, Penault-Llorca, Frederique, Perera, Rashindrie D., Pinard, Christopher J., Pinto-Cardenas, Juan Carlos, Pruneri, Giancarlo, Pusztai, Lajos, Rajpoot, Nasir Mahmood, Rapoport, Bernardo Leon, Rau, Tilman T., Ribeiro, Joana M., Rimm, David, Vincent-Salomon, Anne, Saltz, Joel, Sayed, Shahin, Hytopoulos, Evangelos, Mahon, Sarah, Siziopikou, Kalliopi P., Sotiriou, Christos, Stenzinger, Albrecht, Sughayer, Maher A., Sur, Daniel, Symmans, Fraser, Tanaka, Sunao, Taxter, Timothy, Tejpar, Sabine, Teuwen, Jonas, Thompson, E. Aubrey, Tramm, Trine, Tran, William T., van der Laak, Jeroen, Verghese, Gregory E., Viale, Giuseppe, Wahab, Noorul, Walter, Thomas, Waumans, Yannick, Wen, Hannah Y., Yang, Wentao, Yuan, Yinyin, Bartlett, John, Loibl, Sibylle, Denkert, Carsten, Savas, Peter, Loi, Sherene, Specht Stovgaard, Elisabeth, Salgado, Roberto, Gallagher, William M., Rahman, Arman, Pathologie, Cancer, Jahangir, Chowdhury Arif, Page, David B., Broeckx, Glenn, Gonzalez, Claudia A., Burke, Caoimbhe, Murphy, Clodagh, Reis-Filho, Jorge S., Ly, Amy, Harms, Paul W., Gupta, Rajarsi R., Vieth, Michael, Hida, Akira I., Kahila, Mohamed, Kos, Zuzana, van Diest, Paul J., Verbandt, Sara, Thagaard, Jeppe, Khiroya, Reena, Abduljabbar, Khalid, Acosta Haab, Gabriela, Acs, Balazs, Adams, Sylvia, Almeida, Jonas S., Alvarado-Cabrero, Isabel, Azmoudeh-Ardalan, Farid, Badve, Sunil, Baharun, Nurkhairul Bariyah, Bellolio, Enrique R., Bheemaraju, Vydehi, Blenman, Kim R.M., Botinelly Mendonça Fujimoto, Luciana, Burgues, Octavio, Chardas, Alexandros, Cheang, Maggie Chon U., Ciompi, Francesco, Cooper, Lee A.D., Coosemans, An, Corredor, Germán, Dantas Portela, Flavio Luis, Deman, Frederik, Demaria, Sandra, Dudgeon, Sarah N., Elghazawy, Mahmoud, Fernandez-Martín, Claudio, Fineberg, Susan, Fox, Stephen B., Giltnane, Jennifer M., Gnjatic, Sacha, Gonzalez-Ericsson, Paula I., Grigoriadis, Anita, Halama, Niels, Hanna, Matthew G., Harbhajanka, Aparna, Hart, Steven N., Hartman, Johan, Hewitt, Stephen, Horlings, Hugo M., Husain, Zaheed, Irshad, Sheeba, Janssen, Emiel A.M., Kataoka, Tatsuki R., Kawaguchi, Kosuke, Khramtsov, Andrey I., Kiraz, Umay, Kirtani, Pawan, Kodach, Liudmila L., Korski, Konstanty, Akturk, Guray, Scott, Ely, Kovács, Anikó, Lænkholm, Anne Vibeke, Lang-Schwarz, Corinna, Larsimont, Denis, Lennerz, Jochen K., Lerousseau, Marvin, Li, Xiaoxian, Madabhushi, Anant, Maley, Sai K., Manur Narasimhamurthy, Vidya, Marks, Douglas K., McDonald, Elizabeth S., Mehrotra, Ravi, Michiels, Stefan, Kharidehal, Durga, Minhas, Fayyaz ul Amir Afsar, Mittal, Shachi, Moore, David A., Mushtaq, Shamim, Nighat, Hussain, Papathomas, Thomas, Penault-Llorca, Frederique, Perera, Rashindrie D., Pinard, Christopher J., Pinto-Cardenas, Juan Carlos, Pruneri, Giancarlo, Pusztai, Lajos, Rajpoot, Nasir Mahmood, Rapoport, Bernardo Leon, Rau, Tilman T., Ribeiro, Joana M., Rimm, David, Vincent-Salomon, Anne, Saltz, Joel, Sayed, Shahin, Hytopoulos, Evangelos, Mahon, Sarah, Siziopikou, Kalliopi P., Sotiriou, Christos, Stenzinger, Albrecht, Sughayer, Maher A., Sur, Daniel, Symmans, Fraser, Tanaka, Sunao, Taxter, Timothy, Tejpar, Sabine, Teuwen, Jonas, Thompson, E. Aubrey, Tramm, Trine, Tran, William T., van der Laak, Jeroen, Verghese, Gregory E., Viale, Giuseppe, Wahab, Noorul, Walter, Thomas, Waumans, Yannick, Wen, Hannah Y., Yang, Wentao, Yuan, Yinyin, Bartlett, John, Loibl, Sibylle, Denkert, Carsten, Savas, Peter, Loi, Sherene, Specht Stovgaard, Elisabeth, Salgado, Roberto, Gallagher, William M., and Rahman, Arman
- Published
- 2024
14. Neutral and negative effects of policy bundling on support for decarbonization
- Author
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Marshall, Renae, Marshall, Renae, Anderson, Sarah E, Van Boven, Leaf, Al-Shawaf, Laith, Burgess, Matthew G, Marshall, Renae, Marshall, Renae, Anderson, Sarah E, Van Boven, Leaf, Al-Shawaf, Laith, and Burgess, Matthew G
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- 2024
15. Probabilistic genetic identification of wild boar hybridization to support control of invasive wild pigs (Sus scrofa)
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Department of Agriculture (US), Animal and Plant Health Inspection Service (US), Wildlife Services (US), Ministry of Research, Innovation and Digitization (Romania), Amills, Marcel [0000-0002-8999-0770], Smyser, Timothy J., Pfaffelhuber, Peter, Giglio, Rachael M., DeSaix, Matthew G., Davis, Amy J., Bowden, Courtney F., Tabak, Michael A., Manunza, Arianna, Bâlteanu, Valentin Adrian, Amills, Marcel, Iacolina, Laura, Walker, Pamela, Lessard, Carl, Piaggio, Antoinette J., Department of Agriculture (US), Animal and Plant Health Inspection Service (US), Wildlife Services (US), Ministry of Research, Innovation and Digitization (Romania), Amills, Marcel [0000-0002-8999-0770], Smyser, Timothy J., Pfaffelhuber, Peter, Giglio, Rachael M., DeSaix, Matthew G., Davis, Amy J., Bowden, Courtney F., Tabak, Michael A., Manunza, Arianna, Bâlteanu, Valentin Adrian, Amills, Marcel, Iacolina, Laura, Walker, Pamela, Lessard, Carl, and Piaggio, Antoinette J.
- Abstract
The rapid expansion of wild pigs (Sus scrofa) throughout the United States has been fueled by unlawful introductions, with invasive populations causing extensive crop losses, damaging native ecosystems, and serving as a reservoir for disease. Multiple states have passed laws prohibiting the possession or transport of wild pigs. However, genetic and phenotypic similarities between domestic pigs and invasive wild pigs—which overwhelmingly represent domestic pig and wild boar hybrids—pose a challenge for the enforcement of such regulations. We sought to exploit wild boar ancestry as a common attribute among the vast majority of invasive wild pigs as a means of genetically differentiating wild pigs from breeds of domestic pig found within the United States. We organized reference high-density single nucleotide polymorphism genotypes (1039 samples from 33 domestic breeds and 382 samples from 16 wild boar populations) into five genetically cohesive reference groups: mixed-commercial breeds, Durocs, heritage breeds, primitive breeds, and wild boar. Building upon well-established genetic clustering approaches, we structured the test statistic to describe the difference in the likelihood of a given genotype's ancestry vectors (sensu genetic clustering analysis) if derived strictly from the four described domestic pig reference groups versus allowing for admixture from the wild boar group. By fitting statistical distributions to test statistics of reference domestic pigs, we characterized the distribution of the null hypothesis that a given genotype descends strictly from domestic pig reference groups. We tested the approach with simulated genotypes and empirical data from an additional 29 breeds of domestic pig represented by 435 unique genotypes; all associated test statistics for simulated and empirical domestic pig challenge sets fell within the distribution of reference domestic pigs. We then evaluated 6566 invasive wild pigs sampled across the contiguous United States
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- 2024
16. Phylogenomics and the rise of the angiosperms
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Royal Botanical Gardens, Kew, Aarhus University Research Foundation, Zuntini, Alexandre, Carruthers, Tom, Maurin, Olivier, Bailey, Paul, Leempoel, Kevin, Brewer, Grace, Epitawalage, Niroshini, Françoso, Elaine, Gallego-Paramo, Berta, McGinnie, Catherine, Negrão, Raquel, Roy, Shyamali, Simpson, Lalita, Toledo Romero, Eduardo, Barber, Vanessa, Botigué, Laura R., Clarkson, James, Cowan, Robyn S., Dodsworth, Steven, Johnson, Matthew G., Kim, Jan T., Pokorny, Lisa, Wickett, Norman J., Antar, Guilherme M., Pellicer, Jaume, Royal Botanical Gardens, Kew, Aarhus University Research Foundation, Zuntini, Alexandre, Carruthers, Tom, Maurin, Olivier, Bailey, Paul, Leempoel, Kevin, Brewer, Grace, Epitawalage, Niroshini, Françoso, Elaine, Gallego-Paramo, Berta, McGinnie, Catherine, Negrão, Raquel, Roy, Shyamali, Simpson, Lalita, Toledo Romero, Eduardo, Barber, Vanessa, Botigué, Laura R., Clarkson, James, Cowan, Robyn S., Dodsworth, Steven, Johnson, Matthew G., Kim, Jan T., Pokorny, Lisa, Wickett, Norman J., Antar, Guilherme M., and Pellicer, Jaume
- Abstract
Angiosperms are the cornerstone of most terrestrial ecosystems and human livelihoods1,2. A robust understanding of angiosperm evolution is required to explain their rise to ecological dominance. So far, the angiosperm tree of life has been determined primarily by means of analyses of the plastid genome3,4. Many studies have drawn on this foundational work, such as classification and first insights into angiosperm diversification since their Mesozoic origins5,6,7. However, the limited and biased sampling of both taxa and genomes undermines confidence in the tree and its implications. Here, we build the tree of life for almost 8,000 (about 60%) angiosperm genera using a standardized set of 353 nuclear genes8. This 15-fold increase in genus-level sampling relative to comparable nuclear studies9 provides a critical test of earlier results and brings notable change to key groups, especially in rosids, while substantiating many previously predicted relationships. Scaling this tree to time using 200 fossils, we discovered that early angiosperm evolution was characterized by high gene tree conflict and explosive diversification, giving rise to more than 80% of extant angiosperm orders. Steady diversification ensued through the remaining Mesozoic Era until rates resurged in the Cenozoic Era, concurrent with decreasing global temperatures and tightly linked with gene tree conflict. Taken together, our extensive sampling combined with advanced phylogenomic methods shows the deep history and full complexity in the evolution of a megadiverse clade.
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- 2024
17. Key questions for understanding drivers of biodiversity-ecosystem service relationships across spatial scales
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Natural Sciences and Engineering Research Council of Canada, Felipe Lucía, María [0000-0003-1915-8169], Mitchell, Matthew G. E., Qiu, Jiangxiao, Cardinale, Bradley J., Chan, Kai M. A., Eigenbrod, Felix, Felipe Lucía, María, Jacob, Aerin L., Jones, Matthew S., Sonter, Laura J., Natural Sciences and Engineering Research Council of Canada, Felipe Lucía, María [0000-0003-1915-8169], Mitchell, Matthew G. E., Qiu, Jiangxiao, Cardinale, Bradley J., Chan, Kai M. A., Eigenbrod, Felix, Felipe Lucía, María, Jacob, Aerin L., Jones, Matthew S., and Sonter, Laura J.
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[Context] Biodiversity loss is predicted to have significant impacts on ecosystem services based on previous ecological work at small spatial and temporal scales. However, scaling up understanding of biodiversity-ecosystem service (BES) relationships to broader scales is difficult since ecosystem services emerge from complex interactions between ecosystems, people, and technology., [Objectives] In order to inform and direct future BES research, identify and categorise the ecological and social-ecological drivers operating at different spatial scales that could strengthen or weaken BES relationships., [Methods] We developed a conceptual framework to understand the potential drivers across spatial scales that could affect BES relationships and then categorized these drivers to synthesize the current state of knowledge., [Results] Our conceptual framework identifies ecological/supply-side and social-ecological/demand-side drivers, and cross-scale interactions that influence BES relationships at different scales. Different combinations of these drivers in different contexts will lead to a variety of strengths, shape, and directionality in BES relationships across spatial scales., [Conclusions] We put forward four predictions about the spatial scales that the effects of biodiversity, ecosystem service management, ecosystem co-production, and abiotic linkages or effects will be most evident on BES relationships and use these to propose future directions to best advance BES research across scales.
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- 2024
18. Concise Spectrotemporal Studies of Magnetar SGR J1935+2154 Bursts
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Keskin, Ozge, Gogus, Ersin, Kaneko, Yuki, Demirer, Mustafa, Yamasaki, Shotaro, Baring, Matthew G., Lin, Lin, Roberts, Oliver J., Kouveliotou, Chryssa, Keskin, Ozge, Gogus, Ersin, Kaneko, Yuki, Demirer, Mustafa, Yamasaki, Shotaro, Baring, Matthew G., Lin, Lin, Roberts, Oliver J., and Kouveliotou, Chryssa
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SGR J1935+2154 has truly been the most prolific magnetar over the last decade: It has been entering into burst active episodes once every 1-2 years since its discovery in 2014, it emitted the first Galactic fast radio burst associated with an X-ray burst in 2020, and has emitted hundreds of energetic short bursts. Here, we present the time-resolved spectral analysis of 51 bright bursts from SGR J1935+2154. Unlike conventional time-resolved X-ray spectroscopic studies in the literature, we follow a two-step approach to probe true spectral evolution. For each burst, we first extract spectral information from overlapping time segments, fit them with three continuum models, and employ a machine learning based clustering algorithm to identify time segments that provide the largest spectral variations during each burst. We then extract spectra from those non-overlapping (clustered) time segments and fit them again with the three models: the cutoff power-law model, the sum of two blackbody functions, and the model considering the emission of a modified black body undergoing resonant cyclotron scattering, which is applied systematically at this scale for the first time. Our novel technique allowed us to establish the genuine spectral evolution of magnetar bursts. We discuss the implications of our results and compare their collective behavior with the average burst properties of other magnetars., Comment: Accepted for publication in ApJ
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- 2024
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19. Abundances of Neutron-Capture Elements in 62 Stars in the Globular Cluster Messier 15
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Garcia, Jonathan Cabrera, Sakari, Charli M., Roederer, Ian U., Evans, Donavon W., Silva, Pedro, Mateo, Mario, Song, Ying-Yi, Kremin, Anthony, Bailey III, John I., Walker, Matthew G., Garcia, Jonathan Cabrera, Sakari, Charli M., Roederer, Ian U., Evans, Donavon W., Silva, Pedro, Mateo, Mario, Song, Ying-Yi, Kremin, Anthony, Bailey III, John I., and Walker, Matthew G.
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M15 is a globular cluster with a known spread in neutron-capture elements. This paper presents abundances of neutron-capture elements for 62 stars in M15. Spectra were obtained with the Michigan/Magellan Fiber System (M2FS) spectrograph, covering a wavelength range from ~4430-4630 A. Spectral lines from Fe I, Fe II, Sr I, Zr II, Ba II, La II, Ce II, Nd II, Sm II, Eu II, and Dy II, were measured, enabling classifications and neutron-capture abundance patterns for the stars. Of the 62 targets, 44 are found to be highly Eu-enhanced r-II stars, another 17 are moderately Eu-enhanced r-I stars, and one star is found to have an s-process signature. The neutron-capture patterns indicate that the majority of the stars are consistent with enrichment by the r-process. The 62 target stars are found to show significant star-to-star spreads in Sr, Zr, Ba, La, Ce, Nd, Sm, Eu, and Dy, but no significant spread in Fe. The neutron-capture abundances are further found to have slight correlations with sodium abundances from the literature, unlike what has been previously found; follow-up studies are needed to verify this result. The findings in this paper suggest that the Eu-enhanced stars in M15 were enhanced by the same process, that the nucleosynthetic source of this Eu pollution was the r-process, and that the r-process source occurred as the first generation of cluster stars was forming., Comment: Accepted for publication in the Astrophysical Journal
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- 2024
20. Rapid spin changes around a magnetar fast radio burst
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Hu, Chin-Ping, Narita, Takuto, Enoto, Teruaki, Younes, George, Wadiasingh, Zorawar, Baring, Matthew G., Ho, Wynn C. G., Guillot, Sebastien, Ray, Paul S., Guver, Tolga, Rajwade, Kaustubh, Arzoumanian, Zaven, Kouveliotou, Chryssa, Harding, Alice K., Gendreau, Keith C., Hu, Chin-Ping, Narita, Takuto, Enoto, Teruaki, Younes, George, Wadiasingh, Zorawar, Baring, Matthew G., Ho, Wynn C. G., Guillot, Sebastien, Ray, Paul S., Guver, Tolga, Rajwade, Kaustubh, Arzoumanian, Zaven, Kouveliotou, Chryssa, Harding, Alice K., and Gendreau, Keith C.
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Magnetars are neutron stars with extremely high magnetic fields that exhibit various X-ray phenomena such as sporadic sub-second bursts, long-term persistent flux enhancements, and variable rates of rotation period change. In 2020, a fast radio burst (FRB), akin to cosmological millisecond-duration radio bursts, was detected from the Galactic magnetar SGR 1935+2154, confirming the long-suspected association between some FRBs and magnetars. However, the mechanism for FRB generation in magnetars remains unclear. Here we report the X-ray discovery of an unprecedented double glitch in SGR 1935+2154 within a time interval of approximately nine hours, bracketing an FRB that occurred on October 14, 2022. Each glitch involved a significant increase in the magnetar's spin frequency, being among the largest abrupt changes in neutron star rotation ever observed. Between the glitches, the magnetar exhibited a rapid spin-down phase, accompanied by a profound increase and subsequent decline in its persistent X-ray emission and burst rate. We postulate that a strong, ephemeral, magnetospheric wind provides the torque that rapidly slows the star's rotation. The trigger for the first glitch couples the star's crust to its magnetosphere, enhances the various X-ray signals, and spawns the wind that alters magnetospheric conditions that might produce the FRB., Comment: 46 pages, 9figures, 4 tables, a submitted version of Nature 626, 500 (https://www.nature.com/articles/s41586-023-07012-5)
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- 2024
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21. Deciphering cell states and genealogies of human hematopoiesis
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Weng, Chen, Yu, Fulong, Yang, Dian, Poeschla, Michael, Liggett, L. Alexander, Jones, Matthew G., Qiu, Xiaojie, Wahlster, Lara, Caulier, Alexis, Hussmann, Jeffrey A., Schnell, Alexandra, Yost, Kathryn E., Koblan, Luke, Martin-Rufino, Jorge D., Min, Joseph, Hammond, Alessandro, Ssozi, Daniel, Bueno, Raphael, Mallidi, Hari, Kreso, Antonia, Escabi, Javier, Rideout, William M., Jacks, Tyler, Hormoz, Sahand, van Galen, Peter, Weissman, Jonathan S., Sankaran, Vijay G., Weng, Chen, Yu, Fulong, Yang, Dian, Poeschla, Michael, Liggett, L. Alexander, Jones, Matthew G., Qiu, Xiaojie, Wahlster, Lara, Caulier, Alexis, Hussmann, Jeffrey A., Schnell, Alexandra, Yost, Kathryn E., Koblan, Luke, Martin-Rufino, Jorge D., Min, Joseph, Hammond, Alessandro, Ssozi, Daniel, Bueno, Raphael, Mallidi, Hari, Kreso, Antonia, Escabi, Javier, Rideout, William M., Jacks, Tyler, Hormoz, Sahand, van Galen, Peter, Weissman, Jonathan S., and Sankaran, Vijay G.
- Abstract
The human blood system is maintained through the differentiation and massive amplification of a limited number of long-lived hematopoietic stem cells (HSCs)1. Perturbations to this process underlie diverse diseases, but the clonal contributions to human hematopoiesis and how this changes with age remain incompletely understood. While recent insights have emerged from barcoding studies in model systems4,5,16,17, simultaneous detection of cell states and phylogenies from natural barcodes in humans has been challenging. Here, we introduce an improved single-cell lineage tracing system based on deep detection of naturally-occurring mitochondrial DNA (mtDNA) mutations with simultaneous readout of transcriptional states and chromatin accessibility. We use this system to define the clonal architecture of HSCs and map the physiological state and output of clones. We uncover functional heterogeneity in HSC clones, which is stable over months and manifests as differences in total HSC output as well as biases toward the production of different mature cell types. We also find that the diversity of HSC clones decreases dramatically with age leading to an oligoclonal structure with multiple distinct clonal expansions. Our study thus provides the first clonally-resolved and cell-state aware atlas of human hematopoiesis at single-cell resolution revealing an unappreciated functional diversity of human HSC clones and more broadly paves the way for refined studies of clonal dynamics across a range of tissues in human health and disease.
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- 2024
22. Five Considerations for Twenty-First Century Climate Policy
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Burgess, Matthew G. and Burgess, Matthew G.
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As the twenty-first century advances, society is entering a new phase regarding climate change. Impacts of climate change are becoming more salient in the present, rather than being only far-off in the future. Progress on flattening—and in many affluent countries, reducing—greenhouse gas emissions is also becoming salient, though the progress underperforms international targets. Slowing economic growth and major technological and geopolitical disruptions are creating new challenges and uncertainties. One of these challenges is a political climate of deep divisions and rising distrust in fact-finding institutions—a climate that is ripe for demagoguery. In the United States and some other countries, the issue of climate change has become divisive and has been wielded rhetorically by demagogic political figures and movements on both extremes of the political spectrum. This Article outlines five important considerations for climate policy in this new phase of the twenty-first century, focusing on both the global and the U.S. contexts. (1) Mid-range emissions and warming scenarios are most plausible. In contrast, the science and public discourse of climate change has often focused on extremes. Focusing instead on plausible scenarios offers opportunities to consider important nuances and tradeoffs, and to de-polarize the discourse. (2) Economic growth and income convergence will continue but will probably be slower than previously expected. Continuing economic growth and income convergence would portend continuing improvements throughout the century, in many—if not most—measures of human well-being broadly across the world. However, growth and convergence underperforming expectations could create challenges for climate finance, climate politics, and adaptation to climate change impacts. (3) Major investments are needed in mitigation, adaptation, and carbon removal. The public discourse of climate change has often been hyper-focused on reducing greenhouse-gas emissions (i.
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- 2024
23. A Quick Introduction to Quantum Machine Learning for Non-Practitioners
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Evans, Ethan N., Byrne, Dominic, Cook, Matthew G., Evans, Ethan N., Byrne, Dominic, and Cook, Matthew G.
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This paper provides an introduction to quantum machine learning, exploring the potential benefits of using quantum computing principles and algorithms that may improve upon classical machine learning approaches. Quantum computing utilizes particles governed by quantum mechanics for computational purposes, leveraging properties like superposition and entanglement for information representation and manipulation. Quantum machine learning applies these principles to enhance classical machine learning models, potentially reducing network size and training time on quantum hardware. The paper covers basic quantum mechanics principles, including superposition, phase space, and entanglement, and introduces the concept of quantum gates that exploit these properties. It also reviews classical deep learning concepts, such as artificial neural networks, gradient descent, and backpropagation, before delving into trainable quantum circuits as neural networks. An example problem demonstrates the potential advantages of quantum neural networks, and the appendices provide detailed derivations. The paper aims to help researchers new to quantum mechanics and machine learning develop their expertise more efficiently., Comment: Published as a DTIC report under the title "Quantum Computing for Machine Learning - An Introduction". Distribution Statement A: Approved for Public Release. Distribution is Unlimited
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- 2024
24. Phylogenomic delineation of Physcomitrium (Bryophyta: Funariaceae) based on targeted sequencing of nuclear exons and their flanking regions rejects the retention of Physcomitrella, Physcomitridium and Aphanorrhegma
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Medina Bujalance, Rafael, Matthew G. Johnson, Yang Liu, Norman J. Wickett, A. Jonathan Shaw, Bernard Goffinet, Medina Bujalance, Rafael, Matthew G. Johnson, Yang Liu, Norman J. Wickett, A. Jonathan Shaw, and Bernard Goffinet
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We are grateful to the National Science Foundation for financial support through grants DEB-1240045, DEB-1354631 and DEB-1753811 to BG, DEB-1753800 to MJ, DEB-1239992 to NW, and DEB-1753673 to RM., Selection on spore dispersal mechanisms in mosses is thought to shape the transformation of the sporophyte. The majority of extant mosses develop a sporangium that dehisces through the loss of an operculum, and regulates spore release through the movement of articulate teeth, the peristome, lining the capsule mouth. Such complexity was acquired by the Mesozoic Era, but was lost in some groups during subsequent diversification events, challenging the resolution of the affinities for taxa with reduced architectures. The Funariaceae are a cosmopolitan and diverse lineage of mostly annual mosses, and exhibit variable sporophyte complexities, spanning from long, exerted, operculate capsules with two rings of well-developed teeth, to capsules immersed among maternal leaves, lacking a differentiated line of dehiscence (i.e., inoperculate) and without peristomes. The family underwent a rapid diversification, and the relationships of taxa with reduced sporophytes remain ambiguous. Here, we infer the relationships of five taxa with highly reduced sporophytes based on 648 nuclear loci (exons complemented by their flanking regions), based on inferences from concatenated data and concordance analysis of single gene trees. Physcomitrellopsis is resolved as nested within one clade of Entosthodon. Physcomitrella s. l., is resolved as a polyphyletic assemblage and, along with its putative relative Aphanorrhegma, nested within Physcomitrium. We propose a new monophyletic delineation of Physcomitrium, which accommodates species of Physcomitrella and Aphanorrhegma. The monophyly of Physcomitrium s. l. is supported by a small plurality of exons, but a majority of trees inferred from exons and their adjacent non-coding regions., Division of Environmental Biology. Grant Numbers: 1753800, 1753673, 1240045, 1354631, 1753811, 1239992, Depto. de Biodiversidad, Ecología y Evolución, Fac. de Ciencias Biológicas, TRUE, pub
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- 2024
25. HybPiper: Extracting coding sequence and introns for phylogenetics from high‐throughput sequencing reads using target enrichment
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Matthew G. Johnson, Elliot M. Gardner, Yang Liu, Medina Bujalance, Rafael, Bernard Goffinet, A. Jonathan Shaw, Nyree J. C. Zerega, Norman J. Wickett, Matthew G. Johnson, Elliot M. Gardner, Yang Liu, Medina Bujalance, Rafael, Bernard Goffinet, A. Jonathan Shaw, Nyree J. C. Zerega, and Norman J. Wickett
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This research was funded by National Science Foundation grants to A.J.S. (DEB-1239980), B.G. (DEB-1240045 and DEB-1146295), N.J.W. (DEB-1239992), and N.J.C.Z. (DEB-0919119), and by a grant from the Northwestern University Institute for Sustainability and Energy (N.J.C.Z.). Data generated for this study can be found at www.artocarpusresearch.org, www.datadryad.org( http://dx.doi.org/10.5061/dryad.3293r), and the NCBI Sequence Read Archive (SRA; BioProject PRJNA301299)., Premise of the study: Using sequence data generated via target enrichment for phylogenetics requires reassembly of highthroughput sequence reads into loci, presenting a number of bioinformatics challenges. We developed HybPiper as a userfriendly platform for assembly of gene regions, extraction of exon and intron sequences, and identification of paralogous gene copies. We test HybPiper using baits designed to target 333 phylogenetic markers and 125 genes of functional significance in Artocarpus (Moraceae). Methods and Results: HybPiper implements parallel execution of sequence assembly in three phases: read mapping, contig assembly, and target sequence extraction. The pipeline was able to recover nearly complete gene sequences for all genes in 22 species of Artocarpus. HybPiper also recovered more than 500 bp of nontargeted intron sequence in over half of the phylogenetic markers and identified paralogous gene copies in Artocarpus. Conclusions: HybPiper was designed for Linux and Mac OS X and is freely available at https://github.com/mossmatters/HybPiper., Depto. de Biodiversidad, Ecología y Evolución, Fac. de Ciencias Biológicas, TRUE, pub
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- 2024
26. Rambler: Supporting Writing With Speech via LLM-Assisted Gist Manipulation
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Lin, Susan, Warner, Jeremy, Zamfirescu-Pereira, J. D., Lee, Matthew G., Jain, Sauhard, Huang, Michael Xuelin, Lertvittayakumjorn, Piyawat, Cai, Shanqing, Zhai, Shumin, Hartmann, Björn, Liu, Can, Lin, Susan, Warner, Jeremy, Zamfirescu-Pereira, J. D., Lee, Matthew G., Jain, Sauhard, Huang, Michael Xuelin, Lertvittayakumjorn, Piyawat, Cai, Shanqing, Zhai, Shumin, Hartmann, Björn, and Liu, Can
- Abstract
Dictation enables efficient text input on mobile devices. However, writing with speech can produce disfluent, wordy, and incoherent text and thus requires heavy post-processing. This paper presents Rambler, an LLM-powered graphical user interface that supports gist-level manipulation of dictated text with two main sets of functions: gist extraction and macro revision. Gist extraction generates keywords and summaries as anchors to support the review and interaction with spoken text. LLM-assisted macro revisions allow users to respeak, split, merge and transform dictated text without specifying precise editing locations. Together they pave the way for interactive dictation and revision that help close gaps between spontaneous spoken words and well-structured writing. In a comparative study with 12 participants performing verbal composition tasks, Rambler outperformed the baseline of a speech-to-text editor + ChatGPT, as it better facilitates iterative revisions with enhanced user control over the content while supporting surprisingly diverse user strategies., Comment: To appear at ACM CHI 2024
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- 2024
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27. Efficient N-to-M Checkpointing Algorithm for Finite Element Simulations
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Ham, David A., Hapla, Vaclav, Knepley, Matthew G., Mitchell, Lawrence, Sagiyama, Koki, Ham, David A., Hapla, Vaclav, Knepley, Matthew G., Mitchell, Lawrence, and Sagiyama, Koki
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In this work, we introduce a new algorithm for N-to-M checkpointing in finite element simulations. This new algorithm allows efficient saving/loading of functions representing physical quantities associated with the mesh representing the physical domain. Specifically, the algorithm allows for using different numbers of parallel processes for saving and loading, allowing for restarting and post-processing on the process count appropriate to the given phase of the simulation and other conditions. For demonstration, we implemented this algorithm in PETSc, the Portable, Extensible Toolkit for Scientific Computation, and added a convenient high-level interface into Firedrake, a system for solving partial differential equations using finite element methods. We evaluated our new implementation by saving and loading data involving 8.2 billion finite element degrees of freedom using 8,192 parallel processes on ARCHER2, the UK National Supercomputing Service.
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- 2024
28. Learning how stress changes is necessary to understand how to reduce occupational stress: A dynamic assessment of occupational stressors and wellbeing
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Burgess, Matthew G and Burgess, Matthew G
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Mental ill-health is one of the largest contributors to the global disease burden, affecting over 1 billion people in 2016 (Rehm & Shield, 2019). A substantial proportion of the costs of poor mental health can be attributed directly to work-related stress. Expressed in 2014 dollar terms, the global costs of work-related stress have been estimated at between USD$17.79 and $1,211.84 per worker each year (Hassard et al., 2018). Occupational health psychology (OHP) as a discipline aims to develop a scientific understanding of occupational stress and wellbeing with the dual goals of advancing knowledge and developing methods to improve worker health and wellbeing. The premise of this thesis is that to understand how to change occupational stress and wellbeing, we must first understand how occupational stress and wellbeing changes. [...], Thesis (Professional Doctorate), Doctor of Philosophy in Organisational Psychology (PhD OrgPsych), School of Applied Psychology, Griffith Health, Full Text
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- 2024
29. Image-based multiplex immune profiling of cancer tissues:translational implications. A report of the International Immuno-oncology Biomarker Working Group on Breast Cancer
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Jahangir, Chowdhury Arif, Page, David B., Broeckx, Glenn, Gonzalez, Claudia A., Burke, Caoimbhe, Murphy, Clodagh, Reis-Filho, Jorge S., Ly, Amy, Harms, Paul W., Gupta, Rajarsi R., Vieth, Michael, Hida, Akira I., Kahila, Mohamed, Kos, Zuzana, van Diest, Paul J., Verbandt, Sara, Thagaard, Jeppe, Khiroya, Reena, Abduljabbar, Khalid, Acosta Haab, Gabriela, Acs, Balazs, Adams, Sylvia, Almeida, Jonas S., Alvarado-Cabrero, Isabel, Azmoudeh-Ardalan, Farid, Badve, Sunil, Baharun, Nurkhairul Bariyah, Bellolio, Enrique R., Bheemaraju, Vydehi, Blenman, Kim R.M., Botinelly Mendonça Fujimoto, Luciana, Burgues, Octavio, Chardas, Alexandros, Cheang, Maggie Chon U., Ciompi, Francesco, Cooper, Lee A.D., Coosemans, An, Corredor, Germán, Dantas Portela, Flavio Luis, Deman, Frederik, Demaria, Sandra, Dudgeon, Sarah N., Elghazawy, Mahmoud, Fernandez-Martín, Claudio, Fineberg, Susan, Fox, Stephen B., Giltnane, Jennifer M., Gnjatic, Sacha, Gonzalez-Ericsson, Paula I., Grigoriadis, Anita, Halama, Niels, Hanna, Matthew G., Harbhajanka, Aparna, Hart, Steven N., Hartman, Johan, Hewitt, Stephen, Horlings, Hugo M., Husain, Zaheed, Irshad, Sheeba, Janssen, Emiel A.M., Kataoka, Tatsuki R., Kawaguchi, Kosuke, Khramtsov, Andrey I., Kiraz, Umay, Kirtani, Pawan, Kodach, Liudmila L., Korski, Konstanty, Akturk, Guray, Scott, Ely, Kovács, Anikó, Lænkholm, Anne Vibeke, Lang-Schwarz, Corinna, Larsimont, Denis, Lennerz, Jochen K., Lerousseau, Marvin, Li, Xiaoxian, Madabhushi, Anant, Maley, Sai K., Manur Narasimhamurthy, Vidya, Marks, Douglas K., McDonald, Elizabeth S., Mehrotra, Ravi, Michiels, Stefan, Kharidehal, Durga, Minhas, Fayyaz ul Amir Afsar, Mittal, Shachi, Moore, David A., Mushtaq, Shamim, Nighat, Hussain, Papathomas, Thomas, Penault-Llorca, Frederique, Perera, Rashindrie D., Pinard, Christopher J., Pinto-Cardenas, Juan Carlos, Pruneri, Giancarlo, Pusztai, Lajos, Rajpoot, Nasir Mahmood, Rapoport, Bernardo Leon, Rau, Tilman T., Ribeiro, Joana M., Rimm, David, Vincent-Salomon, Anne, Saltz, Joel, Sayed, Shahin, Hytopoulos, Evangelos, Mahon, Sarah, Siziopikou, Kalliopi P., Sotiriou, Christos, Stenzinger, Albrecht, Sughayer, Maher A., Sur, Daniel, Symmans, Fraser, Tanaka, Sunao, Taxter, Timothy, Tejpar, Sabine, Teuwen, Jonas, Thompson, E. Aubrey, Tramm, Trine, Tran, William T., van der Laak, Jeroen, Verghese, Gregory E., Viale, Giuseppe, Wahab, Noorul, Walter, Thomas, Waumans, Yannick, Wen, Hannah Y., Yang, Wentao, Yuan, Yinyin, Bartlett, John, Loibl, Sibylle, Denkert, Carsten, Savas, Peter, Loi, Sherene, Specht Stovgaard, Elisabeth, Salgado, Roberto, Gallagher, William M., Rahman, Arman, Jahangir, Chowdhury Arif, Page, David B., Broeckx, Glenn, Gonzalez, Claudia A., Burke, Caoimbhe, Murphy, Clodagh, Reis-Filho, Jorge S., Ly, Amy, Harms, Paul W., Gupta, Rajarsi R., Vieth, Michael, Hida, Akira I., Kahila, Mohamed, Kos, Zuzana, van Diest, Paul J., Verbandt, Sara, Thagaard, Jeppe, Khiroya, Reena, Abduljabbar, Khalid, Acosta Haab, Gabriela, Acs, Balazs, Adams, Sylvia, Almeida, Jonas S., Alvarado-Cabrero, Isabel, Azmoudeh-Ardalan, Farid, Badve, Sunil, Baharun, Nurkhairul Bariyah, Bellolio, Enrique R., Bheemaraju, Vydehi, Blenman, Kim R.M., Botinelly Mendonça Fujimoto, Luciana, Burgues, Octavio, Chardas, Alexandros, Cheang, Maggie Chon U., Ciompi, Francesco, Cooper, Lee A.D., Coosemans, An, Corredor, Germán, Dantas Portela, Flavio Luis, Deman, Frederik, Demaria, Sandra, Dudgeon, Sarah N., Elghazawy, Mahmoud, Fernandez-Martín, Claudio, Fineberg, Susan, Fox, Stephen B., Giltnane, Jennifer M., Gnjatic, Sacha, Gonzalez-Ericsson, Paula I., Grigoriadis, Anita, Halama, Niels, Hanna, Matthew G., Harbhajanka, Aparna, Hart, Steven N., Hartman, Johan, Hewitt, Stephen, Horlings, Hugo M., Husain, Zaheed, Irshad, Sheeba, Janssen, Emiel A.M., Kataoka, Tatsuki R., Kawaguchi, Kosuke, Khramtsov, Andrey I., Kiraz, Umay, Kirtani, Pawan, Kodach, Liudmila L., Korski, Konstanty, Akturk, Guray, Scott, Ely, Kovács, Anikó, Lænkholm, Anne Vibeke, Lang-Schwarz, Corinna, Larsimont, Denis, Lennerz, Jochen K., Lerousseau, Marvin, Li, Xiaoxian, Madabhushi, Anant, Maley, Sai K., Manur Narasimhamurthy, Vidya, Marks, Douglas K., McDonald, Elizabeth S., Mehrotra, Ravi, Michiels, Stefan, Kharidehal, Durga, Minhas, Fayyaz ul Amir Afsar, Mittal, Shachi, Moore, David A., Mushtaq, Shamim, Nighat, Hussain, Papathomas, Thomas, Penault-Llorca, Frederique, Perera, Rashindrie D., Pinard, Christopher J., Pinto-Cardenas, Juan Carlos, Pruneri, Giancarlo, Pusztai, Lajos, Rajpoot, Nasir Mahmood, Rapoport, Bernardo Leon, Rau, Tilman T., Ribeiro, Joana M., Rimm, David, Vincent-Salomon, Anne, Saltz, Joel, Sayed, Shahin, Hytopoulos, Evangelos, Mahon, Sarah, Siziopikou, Kalliopi P., Sotiriou, Christos, Stenzinger, Albrecht, Sughayer, Maher A., Sur, Daniel, Symmans, Fraser, Tanaka, Sunao, Taxter, Timothy, Tejpar, Sabine, Teuwen, Jonas, Thompson, E. Aubrey, Tramm, Trine, Tran, William T., van der Laak, Jeroen, Verghese, Gregory E., Viale, Giuseppe, Wahab, Noorul, Walter, Thomas, Waumans, Yannick, Wen, Hannah Y., Yang, Wentao, Yuan, Yinyin, Bartlett, John, Loibl, Sibylle, Denkert, Carsten, Savas, Peter, Loi, Sherene, Specht Stovgaard, Elisabeth, Salgado, Roberto, Gallagher, William M., and Rahman, Arman
- Abstract
Recent advances in the field of immuno-oncology have brought transformative changes in the management of cancer patients. The immune profile of tumours has been found to have key value in predicting disease prognosis and treatment response in various cancers. Multiplex immunohistochemistry and immunofluorescence have emerged as potent tools for the simultaneous detection of multiple protein biomarkers in a single tissue section, thereby expanding opportunities for molecular and immune profiling while preserving tissue samples. By establishing the phenotype of individual tumour cells when distributed within a mixed cell population, the identification of clinically relevant biomarkers with high-throughput multiplex immunophenotyping of tumour samples has great potential to guide appropriate treatment choices. Moreover, the emergence of novel multi-marker imaging approaches can now provide unprecedented insights into the tumour microenvironment, including the potential interplay between various cell types. However, there are significant challenges to widespread integration of these technologies in daily research and clinical practice. This review addresses the challenges and potential solutions within a structured framework of action from a regulatory and clinical trial perspective. New developments within the field of immunophenotyping using multiplexed tissue imaging platforms and associated digital pathology are also described, with a specific focus on translational implications across different subtypes of cancer.
- Published
- 2024
30. Systematic discovery of recombinases for efficient integration of large DNA sequences into the human genome.
- Author
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Durrant, Matthew G, Durrant, Matthew G, Fanton, Alison, Tycko, Josh, Hinks, Michaela, Chandrasekaran, Sita S, Perry, Nicholas T, Schaepe, Julia, Du, Peter P, Lotfy, Peter, Bassik, Michael C, Bintu, Lacramioara, Bhatt, Ami S, Hsu, Patrick D, Durrant, Matthew G, Durrant, Matthew G, Fanton, Alison, Tycko, Josh, Hinks, Michaela, Chandrasekaran, Sita S, Perry, Nicholas T, Schaepe, Julia, Du, Peter P, Lotfy, Peter, Bassik, Michael C, Bintu, Lacramioara, Bhatt, Ami S, and Hsu, Patrick D
- Abstract
Large serine recombinases (LSRs) are DNA integrases that facilitate the site-specific integration of mobile genetic elements into bacterial genomes. Only a few LSRs, such as Bxb1 and PhiC31, have been characterized to date, with limited efficiency as tools for DNA integration in human cells. In this study, we developed a computational approach to identify thousands of LSRs and their DNA attachment sites, expanding known LSR diversity by >100-fold and enabling the prediction of their insertion site specificities. We tested their recombination activity in human cells, classifying them as landing pad, genome-targeting or multi-targeting LSRs. Overall, we achieved up to seven-fold higher recombination than Bxb1 and genome integration efficiencies of 40-75% with cargo sizes over 7 kb. We also demonstrate virus-free, direct integration of plasmid or amplicon libraries for improved functional genomics applications. This systematic discovery of recombinases directly from microbial sequencing data provides a resource of over 60 LSRs experimentally characterized in human cells for large-payload genome insertion without exposed DNA double-stranded breaks.
- Published
- 2023
31. Apoptotic cell death in disease—Current understanding of the NCCD 2023
- Author
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Associazione Italiana per la Ricerca sul Cancro, Italian Institute for Genomic Medicine, Compagnia di San Paolo, Vitale, Ilio [0000-0002-5918-1841], Pietrocola, Federico [0000-0002-2930-234X], Guilbaud, Emma [0000-0001-5261-1944], Aaronson, Stuart A. [0000-0002-4643-0474], Dieter, Adam [0000-0002-5668-5032], Agostini, Massimiliano [0000-0003-3124-2072], Agostinis, Patrizia [0000-0003-1314-2115], Alnemri, Emad S. [0000-0002-7295-3383], Altucci, Lucia [0000-0002-7312-5387], Amelio, Ivano [0000-0002-9126-5391], Andrews, David W. [0000-0002-9266-7157], Aqeilan, Rami I. [0000-0002-6034-023X], Arama, Eli [0000-0001-5953-0629], Balachandran, Siddharth [0000-0003-2084-1803], Bano, Daniele [0000-0002-9617-5504], Bartek, Jiri [0000-0003-2013-7525], Bazan, Nicolas G. [0000-0002-9243-5444], Bernassola, Francesca [0000-0002-8883-8654], Bertrand, Mathieu J. M. [0000-0001-9000-0626], Bianchi, Marco Emilio [0000-0002-5329-6445], Blander, J. Magarian [0000-0001-9207-1700], Blandino, Giovanni [0000-0002-6970-2241], Blomgren, Klas [0000-0002-0476-7271], Bortner, Carl D. [0000-0002-5444-6628], Bove, Pierluigi [0000-0002-4788-2982], Boya, Patricia [0000-0003-3045-951X], Broz, Petr [0000-0002-2334-7790], Damgaard, Rune Busk [0000-0002-1709-6534], Calin, George A. [0000-0002-7427-0578], Campanella, Michelangelo [0000-0002-6948-4184], Candi, Eleonora [0000-0001-8332-4825], Carbone, Michele [0000-0001-8928-8474], Carmona-Gutierrez, Didac [0000-0001-7548-7771], Cecconi, Francesco [0000-0002-5614-4359], Chen, Guo‑Qiang [0000-0002-7226-1782], Cheng, Emily H. [0000-0002-3595-2648], Chipuk, Jerry E. [0000-0002-1337-842X], Cidlowski, John A. [0000-0003-1420-0516], Ciechanover, Aaron [0000-0001-9184-8944], Ciliberto, Gennaro [0000-0003-2851-8605], Conrad, Marcus [0000-0003-1140-5612], Czabotar, Peter E. [0000-0002-2594-496X], D’Angiolella, Vincenzo [0000-0001-8365-9094], Daugaard, Mads [0000-0001-8383-055X], Dawson, Valina L. [0000-0002-2915-3970], De Maria, Ruggero [0000-0003-2255-0583], Debatin, Klaus-Michael [0000-0002-8397-1886], Deberardinis, Ralph J. [0000-0002-2705-7432], Degterev, Alexei [0000-0002-8240-7132], Del Sal, Giannino [0000-0003-2185-6003], Deshmukh, Mohanish [0000-0002-2597-5862], Di Virgilio, Francesco [0000-0003-3566-1362], Diederich, Marc [0000-0003-0115-4725], Dixon, Scott J. [0000-0001-6230-8199], El-Deiry, Wafik S. [0000-0002-9577-8266], Elrod, John W. [0000-0003-3925-2224], Engeland, Kurt [0000-0003-3525-0440], Fimia, Gian María [0000-0003-4438-3325], Ganini, Carlo [0000-0002-5839-3965], García-Sáez, Ana J. [0000-0002-3894-5945], Garg, Abhishek D. [0000-0002-9976-9922], Garrido, Carmen [0000-0003-1368-1493], Gavathiotis, Evripidis [0000-0001-6319-8331], Ghosh, Sourav [0000-0001-5990-8708], Green, Douglas R. [0000-0002-7332-1417], Gronemeyer, Hinrich [0000-0001-9454-2449}, Häcker, Georg [0000-0003-1058-5746], Hajnóczky, György [0000-0003-3813-2570], Hardwick, J. Marie [0000-0002-4847-2045], Haupt, Ygal [0000-0001-5925-0096], He, Sudan [0000-0002-0846-1210], Heery, David M. [0000-0002-5035-2392], Hengartner, Michael O. [0000-0002-7584-596X], Hetz, Claudio [0000-0003-1120-7966], Hildeman, David A. [0000-0002-0421-8483], Ichijo, Hidenori [0000-0002-5005-6438], Jäättelä, Marja [0000-0001-5950-7111], Janic, Ana [0000-0002-4200-2560], Joseph, Bertrand [0000-0001-5655-9979], Jost, Philipp J. [0000-0003-2454-0362], Kanneganti, Thirumala-Devi [0000-0002-6395-6443], Karin, Michael [0000-0002-2758-6473], Kashkar, Hamid [0000-0003-2796-1429], Kaufmann, Thomas [0000-0001-9906-874X], Kelly, Gemma L. [0000-0002-6533-1201], Kepp, Oliver [0000-0002-6081-9558], Kimchi, Adi [0000-0002-8236-8989], Klionsky, Daniel J. [0000-0002-7828-8118], Kluck, Ruth [0000-0002-7101-1925], Krysko, Dmitri V. [0000-0002-9692-2047], Kulms, Dagmar [0000-0001-6874-0548], Kumar, Sharad [0000-0001-7126-9814], Lavandero, Sergio [0000-0003-4258-1483], Lavrik, Inna N. [0000-0002-9324-309X], Liccardi, Gianmaria [0000-0002-2662-1281], Linkermann, Andreas [0000-0001-6287-9725], Lipton, Stuart A. [0000-0002-3490-1259], Lockshin, Richard A. [0000-0002-4389-4898], López-Otín, Carlos [0000-0001-6964-1904], Luedde, Tom [0000-0002-6288-8821], MacFarlane, Marion [0000-0001-7886-1159], Madeo, Frank [0000-0002-5070-1329], Malorni, Walter [0000-0002-1223-7000], Manic, Gwenola [0000-0003-3759-8029], Marchi, Saverio [0000-0003-2708-1843], Marine, Jean-Christophe [0000-0003-2433-9837], Martin, Seamus J. [0000-0002-8539-3143], Martinou, Jean-Claude [0000-0002-9847-2051], Mastroberardino, Pier G. [0000-0003-2364-4258], Medema, Jan Paul [0000-0003-3045-2924], Mehlen, Patrick [0000-0003-1743-5417], Meier, Pascal [0000-0003-2760-6523], Melino, Gerry [0000-0001-9428-5972], Melino, Sonia [0000-0001-7694-5279], Miao, Edward A. [0000-0001-7295-3490], Moll, Ute M. [0000-0003-1908-7516], Muñoz-Pinedo, Cristina [0000-0002-9120-664X], Murphy, Daniel J. [0000-0002-5538-5468], Niklison-Chirou, Maria Victoria [0000-0002-2147-370X], Novelli, Flavia [0000-0002-3746-7478], Oberst, Andrew [0000-0002-9500-7912], Ofengeim, Dimitry [0000-0003-2348-3642], Opferman, Joseph T. [0000-0002-1147-5621], Oren, Moshe [0000-0003-4311-7172], Pagano, Michele [0000-0003-3210-2442], Panaretakis, Theocharis [0000-0001-5754-6950], Pasparakis, Manolis [0000-0002-9870-0966], Penninger, Josef M. [0000-0002-8194-3777], Pentimalli, Francesca [0000-0003-4740-6801], Pereira, David M. [0000-0003-0384-7592], Pervaiz, Shazib [0000-0002-4738-019X], Peter, Marcus E. [0000-0003-3216-036X], Pinton, Paolo [0000-0001-7108-6508], Porta, Giovanni [0000-0001-5260-2415], Puthalakath, Hamsa [0000-0001-5178-1175], Rabinovich, Gabriel A. [0000-0002-0947-8735], Rajalingam, Krishnaraj [0000-0002-4175-9633], Ravinchandran, Kodi S. [0000-0001-9049-1410], Rehm, Markus [0000-0001-6149-9261], Ricci, Jean-Ehrland [0000-0003-1585-8117], Rizzuto, Rosario [0000-0001-7044-5097], Robinson, Nirmal [0000-0002-7361-9491], Rotblat, Barak [0000-0003-2985-7115], Rothlin, Carla V. [0000-0002-5693-5572], Rubinsztein, David C. [0000-0001-5002-5263], Rufini, Alessandro [0000-0002-5855-655X], Ryan, Kevin M. [0000-0002-1059-9681], Sarosiek, Kristopher A. [0000-0002-4618-5085], Sawa, Akira [0000-0003-1401-3008], Sayan, Emre [0000-0002-5291-1485], Schroder, Kate [0000-0001-9261-3805], Scorrano, Luca [0000-0002-8515-8928], Sesti, Federico [0000-0002-2761-9693], Shi, Yufang [0000-0001-8964-319X], Sica, Giuseppe [0000-0002-7407-0584], Silke, John [0000-0002-7611-5774], Simon, Hans-Uwe [0000-0002-9404-7736], Sistigu, Antonella [0000-0002-2528-1238], Stockwell, Brent R. [0000-0002-3532-3868], Strappazzon, Flavie [0000-0003-0285-7449], Sun, Liming [0000-0002-0136-5605], Sun, Erwei [0000-0001-5664-513X], Szabadkai, G [0000-0002-3006-3577], Tait, Stephen W. G. [0000-0001-7697-132X], Tang, Daolin [0000-0002-1903-6180], Tavernarakis, Nektarios [0000-0002-5253-1466], Turk, Boris [0000-0002-9007-5764], Urbano, Nicoletta [0000-0003-1822-155X], Vandenabeele, Peter [0000-0002-6669-8822], Vanden Berghe, Tom [0000-0002-1633-0974], Vander Heiden, Matthew G. [0000-0002-6702-4192], Vanderluit, Jacqueline L. [0000-0002-4960-920X], Verkhratsky, A. [0000-0003-2592-9898], Villunger, Andreas [0000-0001-8259-4153], Von Karstedt, Silvia [0000-0002-7816-5919], Voss, Anne K. [0000-0002-3853-9381], Vucic, Domagoj [0000-0003-3614-8093], Vuri, Daniela [0000-0001-8693-3845], Wagner, Erwin F. [0000-0001-7872-0196], Walczak, Henning [0000-0002-6312-4591], Wallach, David [0000-0003-2724-9757], Wang, Ruoning [0000-0001-9798-8032], Weber, Achim [0000-0003-0073-3637], Yamazaki, Takahiro [0000-0002-7420-4394], Zakeri, Zahra [0000-0003-4386-8072], Zawacka-Pankau, Joanna E. [0000-0002-7415-2942], Zhivotovsky, Boris [0000-0002-2238-3482], Piacentini, Mauro [0000-0003-2919-1296], Kroemer, Guido [0000-0002-9334-4405], Galluzzi, Lorenzo [0000-0003-2257-8500 ], Vitale, Ilio, Pietrocola, Federico, Guilbaud, Emma, Aaronson, Stuart A., Abrams, John M., Dieter, Adam, Agostini, Massimiliano, Agostinis, Patrizia, Alnemri, Emad S., Altucci, Lucia, Amelio, Ivano, Andrews, David W., Aqeilan, Rami I., Arama, Eli, Baehrecke, Eric H., Balachandran, Siddharth, Bano, Daniele, Barlev, Nickolai A., Bartek, Jiri, Bazan, Nicolas G., Becker, Christoph, Bernassola, Francesca, Bertrand, Mathieu J. M., Bianchi, Marco Emilio, Blagosklonny, Mikhail V., Blander, J. Magarian, Blandino, Giovanni, Blomgren, Klas, Bomer, Christoph, Bortner, Carl D., Bove, Pierluigi, Boya, Patricia, Brenner, Catherine, Broz, Petr, Brunner, T., Damgaard, Rune Busk, Calin, George A., Campanella, Michelangelo, Candi, Eleonora, Carbone, Michele, Carmona-Gutierrez, Didac, Cecconi, Francesco, Chan, Francis K.-M., Chen, Guo‑Qiang, Chen, Quan, Chen, Youhai H., Cheng, Emily H., Chipuk, Jerry E., Cidlowski, John A., Ciechanover, Aaron, Ciliberto, Gennaro, Conrad, Marcus, Cubillos-Ruiz, Juan R., Czabotar, Peter E., D’Angiolella, Vincenzo, Daugaard, Mads, Dawson, Ted M., Dawson, Valina L., De Maria, Ruggero, De Strooper, B., Debatin, Klaus-Michael, Deberardinis, Ralph J., Degterev, Alexei, Del Sal, Giannino, Deshmukh, Mohanish, Di Virgilio, Francesco, Diederich, Marc, Dixon, Scott J., Dynlacht, Brian D., El-Deiry, Wafik S., Elrod, John W., Engeland, Kurt, Fimia, Gian María, Galassi, Claudia, Ganini, Carlo, García-Sáez, Ana J., Garg, Abhishek D., Garrido, Carmen, Gavathiotis, Evripidis, Gerlic, Motti, Ghosh, Sourav, Green, Douglas R., Greene, Lloyd A., Gronemeyer, Hinrich, Häcker, Georg, Hajnóczky, György, Hardwick, J. Marie, Haupt, Ygal, He, Sudan, Heery, David M., Hengartner, Michael O., Hetz, Claudio, Hildeman, David A., Ichijo, Hidenori, Inoue, Satoshi, Jäättelä, Marja, Janic, Ana, Joseph, Bertrand, Jost, Philipp J., Kanneganti, Thirumala-Devi, Karin, Michael, Kashkar, Hamid, Kaufmann, Thomas, Kelly, Gemma L., Kepp, Oliver, Kimchi, Adi, Kitsis, Richard N., Klionsky, Daniel J., Kluck, Ruth, Krysko, Dmitri V., Kulms, Dagmar, Kumar, Sharad, Lavandero, Sergio, Lavrik, Inna N., Lemasters, John J., Liccardi, Gianmaria, Linkermann, Andreas, Lipton, Stuart A., Lockshin, Richard A., López-Otín, Carlos, Luedde, Tom, MacFarlane, Marion, Madeo, Frank, Malorni, Walter, Manic, Gwenola, Mantovani, Roberto, Marchi, Saverio, Marine, Jean-Christophe, Martin, Seamus J., Martinou, Jean-Claude, Mastroberardino, Pier G., Medema, Jan Paul, Mehlen, Patrick, Meier, Pascal, Melino, Gerry, Melino, Sonia, Miao, Edward A., Moll, Ute M., Muñoz-Pinedo, Cristina, Murphy, Daniel J., Niklison-Chirou, Maria Victoria, Novelli, Flavia, Núñez, Gabriel, Oberst, Andrew, Ofengeim, Dimitry, Opferman, Joseph T., Oren, Moshe, Pagano, Michele, Panaretakis, Theocharis, Pasparakis, Manolis, Penninger, Josef M., Pentimalli, Francesca, Pereira, David M., Pervaiz, Shazib, Peter, Marcus E., Pinton, Paolo, Porta, Giovanni, Prehn, Jochen H. M., Puthalakath, Hamsa, Rabinovich, Gabriel A., Rajalingam, Krishnaraj, Ravinchandran, Kodi S., Rehm, Markus, Ricci, Jean-Ehrland, Rizzuto, Rosario, Robinson, Nirmal, Rodrigues, Cecilia M. P., Rotblat, Barak, Rothlin, Carla V., Rubinsztein, David C., Rudel, Thomas, Rufini, Alessandro, Ryan, Kevin M., Sarosiek, Kristopher A., Sawa, Akira, Sayan, Emre, Schroder, Kate, Scorrano, Luca, Sesti, Federico, Shao, Feng, Shi, Yufang, Sica, Giuseppe, Silke, John, Simon, Hans-Uwe, Sistigu, Antonella, Stephanou, Anastasis, Stockwell, Brent R., Strappazzon, Flavie, Strasser, Andreas, Sun, Liming, Sun, Erwei, Sun, Qiang, Szabadkai, G, Tait, Stephen W. G., Tang, Daolin, Tavernarakis, Nektarios, Troy, Carol M., Turk, Boris, Urbano, Nicoletta, Vandenabeele, Peter, Vanden Berghe, Tom, Vander Heiden, Matthew G., Vanderluit, Jacqueline L., Verkhratsky, A., Villunger, Andreas, Von Karstedt, Silvia, Voss, Anne K., Vousden, Karen H., Vucic, Domagoj, Vuri, Daniela, Wagner, Erwin F., Walczak, Henning, Wallach, David, Wang, Ruoning, Wang, Ying, Weber, Achim, Wood, Will, Yamazaki, Takahiro, Yang, Zahra, Zakeri, Zahra, Zawacka-Pankau, Joanna E., Zhang, Lin, Zhang, Haibin, Zhivotovsky, Boris, Zhou, Wenzhao, Piacentini, Mauro, Kroemer, Guido, Galluzzi, Lorenzo, Associazione Italiana per la Ricerca sul Cancro, Italian Institute for Genomic Medicine, Compagnia di San Paolo, Vitale, Ilio [0000-0002-5918-1841], Pietrocola, Federico [0000-0002-2930-234X], Guilbaud, Emma [0000-0001-5261-1944], Aaronson, Stuart A. [0000-0002-4643-0474], Dieter, Adam [0000-0002-5668-5032], Agostini, Massimiliano [0000-0003-3124-2072], Agostinis, Patrizia [0000-0003-1314-2115], Alnemri, Emad S. [0000-0002-7295-3383], Altucci, Lucia [0000-0002-7312-5387], Amelio, Ivano [0000-0002-9126-5391], Andrews, David W. [0000-0002-9266-7157], Aqeilan, Rami I. [0000-0002-6034-023X], Arama, Eli [0000-0001-5953-0629], Balachandran, Siddharth [0000-0003-2084-1803], Bano, Daniele [0000-0002-9617-5504], Bartek, Jiri [0000-0003-2013-7525], Bazan, Nicolas G. [0000-0002-9243-5444], Bernassola, Francesca [0000-0002-8883-8654], Bertrand, Mathieu J. M. [0000-0001-9000-0626], Bianchi, Marco Emilio [0000-0002-5329-6445], Blander, J. Magarian [0000-0001-9207-1700], Blandino, Giovanni [0000-0002-6970-2241], Blomgren, Klas [0000-0002-0476-7271], Bortner, Carl D. [0000-0002-5444-6628], Bove, Pierluigi [0000-0002-4788-2982], Boya, Patricia [0000-0003-3045-951X], Broz, Petr [0000-0002-2334-7790], Damgaard, Rune Busk [0000-0002-1709-6534], Calin, George A. [0000-0002-7427-0578], Campanella, Michelangelo [0000-0002-6948-4184], Candi, Eleonora [0000-0001-8332-4825], Carbone, Michele [0000-0001-8928-8474], Carmona-Gutierrez, Didac [0000-0001-7548-7771], Cecconi, Francesco [0000-0002-5614-4359], Chen, Guo‑Qiang [0000-0002-7226-1782], Cheng, Emily H. [0000-0002-3595-2648], Chipuk, Jerry E. [0000-0002-1337-842X], Cidlowski, John A. [0000-0003-1420-0516], Ciechanover, Aaron [0000-0001-9184-8944], Ciliberto, Gennaro [0000-0003-2851-8605], Conrad, Marcus [0000-0003-1140-5612], Czabotar, Peter E. [0000-0002-2594-496X], D’Angiolella, Vincenzo [0000-0001-8365-9094], Daugaard, Mads [0000-0001-8383-055X], Dawson, Valina L. [0000-0002-2915-3970], De Maria, Ruggero [0000-0003-2255-0583], Debatin, Klaus-Michael [0000-0002-8397-1886], Deberardinis, Ralph J. [0000-0002-2705-7432], Degterev, Alexei [0000-0002-8240-7132], Del Sal, Giannino [0000-0003-2185-6003], Deshmukh, Mohanish [0000-0002-2597-5862], Di Virgilio, Francesco [0000-0003-3566-1362], Diederich, Marc [0000-0003-0115-4725], Dixon, Scott J. [0000-0001-6230-8199], El-Deiry, Wafik S. [0000-0002-9577-8266], Elrod, John W. [0000-0003-3925-2224], Engeland, Kurt [0000-0003-3525-0440], Fimia, Gian María [0000-0003-4438-3325], Ganini, Carlo [0000-0002-5839-3965], García-Sáez, Ana J. [0000-0002-3894-5945], Garg, Abhishek D. [0000-0002-9976-9922], Garrido, Carmen [0000-0003-1368-1493], Gavathiotis, Evripidis [0000-0001-6319-8331], Ghosh, Sourav [0000-0001-5990-8708], Green, Douglas R. [0000-0002-7332-1417], Gronemeyer, Hinrich [0000-0001-9454-2449}, Häcker, Georg [0000-0003-1058-5746], Hajnóczky, György [0000-0003-3813-2570], Hardwick, J. Marie [0000-0002-4847-2045], Haupt, Ygal [0000-0001-5925-0096], He, Sudan [0000-0002-0846-1210], Heery, David M. [0000-0002-5035-2392], Hengartner, Michael O. [0000-0002-7584-596X], Hetz, Claudio [0000-0003-1120-7966], Hildeman, David A. [0000-0002-0421-8483], Ichijo, Hidenori [0000-0002-5005-6438], Jäättelä, Marja [0000-0001-5950-7111], Janic, Ana [0000-0002-4200-2560], Joseph, Bertrand [0000-0001-5655-9979], Jost, Philipp J. [0000-0003-2454-0362], Kanneganti, Thirumala-Devi [0000-0002-6395-6443], Karin, Michael [0000-0002-2758-6473], Kashkar, Hamid [0000-0003-2796-1429], Kaufmann, Thomas [0000-0001-9906-874X], Kelly, Gemma L. [0000-0002-6533-1201], Kepp, Oliver [0000-0002-6081-9558], Kimchi, Adi [0000-0002-8236-8989], Klionsky, Daniel J. [0000-0002-7828-8118], Kluck, Ruth [0000-0002-7101-1925], Krysko, Dmitri V. [0000-0002-9692-2047], Kulms, Dagmar [0000-0001-6874-0548], Kumar, Sharad [0000-0001-7126-9814], Lavandero, Sergio [0000-0003-4258-1483], Lavrik, Inna N. [0000-0002-9324-309X], Liccardi, Gianmaria [0000-0002-2662-1281], Linkermann, Andreas [0000-0001-6287-9725], Lipton, Stuart A. [0000-0002-3490-1259], Lockshin, Richard A. [0000-0002-4389-4898], López-Otín, Carlos [0000-0001-6964-1904], Luedde, Tom [0000-0002-6288-8821], MacFarlane, Marion [0000-0001-7886-1159], Madeo, Frank [0000-0002-5070-1329], Malorni, Walter [0000-0002-1223-7000], Manic, Gwenola [0000-0003-3759-8029], Marchi, Saverio [0000-0003-2708-1843], Marine, Jean-Christophe [0000-0003-2433-9837], Martin, Seamus J. [0000-0002-8539-3143], Martinou, Jean-Claude [0000-0002-9847-2051], Mastroberardino, Pier G. [0000-0003-2364-4258], Medema, Jan Paul [0000-0003-3045-2924], Mehlen, Patrick [0000-0003-1743-5417], Meier, Pascal [0000-0003-2760-6523], Melino, Gerry [0000-0001-9428-5972], Melino, Sonia [0000-0001-7694-5279], Miao, Edward A. [0000-0001-7295-3490], Moll, Ute M. [0000-0003-1908-7516], Muñoz-Pinedo, Cristina [0000-0002-9120-664X], Murphy, Daniel J. [0000-0002-5538-5468], Niklison-Chirou, Maria Victoria [0000-0002-2147-370X], Novelli, Flavia [0000-0002-3746-7478], Oberst, Andrew [0000-0002-9500-7912], Ofengeim, Dimitry [0000-0003-2348-3642], Opferman, Joseph T. [0000-0002-1147-5621], Oren, Moshe [0000-0003-4311-7172], Pagano, Michele [0000-0003-3210-2442], Panaretakis, Theocharis [0000-0001-5754-6950], Pasparakis, Manolis [0000-0002-9870-0966], Penninger, Josef M. [0000-0002-8194-3777], Pentimalli, Francesca [0000-0003-4740-6801], Pereira, David M. [0000-0003-0384-7592], Pervaiz, Shazib [0000-0002-4738-019X], Peter, Marcus E. [0000-0003-3216-036X], Pinton, Paolo [0000-0001-7108-6508], Porta, Giovanni [0000-0001-5260-2415], Puthalakath, Hamsa [0000-0001-5178-1175], Rabinovich, Gabriel A. [0000-0002-0947-8735], Rajalingam, Krishnaraj [0000-0002-4175-9633], Ravinchandran, Kodi S. [0000-0001-9049-1410], Rehm, Markus [0000-0001-6149-9261], Ricci, Jean-Ehrland [0000-0003-1585-8117], Rizzuto, Rosario [0000-0001-7044-5097], Robinson, Nirmal [0000-0002-7361-9491], Rotblat, Barak [0000-0003-2985-7115], Rothlin, Carla V. [0000-0002-5693-5572], Rubinsztein, David C. [0000-0001-5002-5263], Rufini, Alessandro [0000-0002-5855-655X], Ryan, Kevin M. [0000-0002-1059-9681], Sarosiek, Kristopher A. [0000-0002-4618-5085], Sawa, Akira [0000-0003-1401-3008], Sayan, Emre [0000-0002-5291-1485], Schroder, Kate [0000-0001-9261-3805], Scorrano, Luca [0000-0002-8515-8928], Sesti, Federico [0000-0002-2761-9693], Shi, Yufang [0000-0001-8964-319X], Sica, Giuseppe [0000-0002-7407-0584], Silke, John [0000-0002-7611-5774], Simon, Hans-Uwe [0000-0002-9404-7736], Sistigu, Antonella [0000-0002-2528-1238], Stockwell, Brent R. [0000-0002-3532-3868], Strappazzon, Flavie [0000-0003-0285-7449], Sun, Liming [0000-0002-0136-5605], Sun, Erwei [0000-0001-5664-513X], Szabadkai, G [0000-0002-3006-3577], Tait, Stephen W. G. [0000-0001-7697-132X], Tang, Daolin [0000-0002-1903-6180], Tavernarakis, Nektarios [0000-0002-5253-1466], Turk, Boris [0000-0002-9007-5764], Urbano, Nicoletta [0000-0003-1822-155X], Vandenabeele, Peter [0000-0002-6669-8822], Vanden Berghe, Tom [0000-0002-1633-0974], Vander Heiden, Matthew G. [0000-0002-6702-4192], Vanderluit, Jacqueline L. [0000-0002-4960-920X], Verkhratsky, A. [0000-0003-2592-9898], Villunger, Andreas [0000-0001-8259-4153], Von Karstedt, Silvia [0000-0002-7816-5919], Voss, Anne K. [0000-0002-3853-9381], Vucic, Domagoj [0000-0003-3614-8093], Vuri, Daniela [0000-0001-8693-3845], Wagner, Erwin F. [0000-0001-7872-0196], Walczak, Henning [0000-0002-6312-4591], Wallach, David [0000-0003-2724-9757], Wang, Ruoning [0000-0001-9798-8032], Weber, Achim [0000-0003-0073-3637], Yamazaki, Takahiro [0000-0002-7420-4394], Zakeri, Zahra [0000-0003-4386-8072], Zawacka-Pankau, Joanna E. [0000-0002-7415-2942], Zhivotovsky, Boris [0000-0002-2238-3482], Piacentini, Mauro [0000-0003-2919-1296], Kroemer, Guido [0000-0002-9334-4405], Galluzzi, Lorenzo [0000-0003-2257-8500 ], Vitale, Ilio, Pietrocola, Federico, Guilbaud, Emma, Aaronson, Stuart A., Abrams, John M., Dieter, Adam, Agostini, Massimiliano, Agostinis, Patrizia, Alnemri, Emad S., Altucci, Lucia, Amelio, Ivano, Andrews, David W., Aqeilan, Rami I., Arama, Eli, Baehrecke, Eric H., Balachandran, Siddharth, Bano, Daniele, Barlev, Nickolai A., Bartek, Jiri, Bazan, Nicolas G., Becker, Christoph, Bernassola, Francesca, Bertrand, Mathieu J. M., Bianchi, Marco Emilio, Blagosklonny, Mikhail V., Blander, J. Magarian, Blandino, Giovanni, Blomgren, Klas, Bomer, Christoph, Bortner, Carl D., Bove, Pierluigi, Boya, Patricia, Brenner, Catherine, Broz, Petr, Brunner, T., Damgaard, Rune Busk, Calin, George A., Campanella, Michelangelo, Candi, Eleonora, Carbone, Michele, Carmona-Gutierrez, Didac, Cecconi, Francesco, Chan, Francis K.-M., Chen, Guo‑Qiang, Chen, Quan, Chen, Youhai H., Cheng, Emily H., Chipuk, Jerry E., Cidlowski, John A., Ciechanover, Aaron, Ciliberto, Gennaro, Conrad, Marcus, Cubillos-Ruiz, Juan R., Czabotar, Peter E., D’Angiolella, Vincenzo, Daugaard, Mads, Dawson, Ted M., Dawson, Valina L., De Maria, Ruggero, De Strooper, B., Debatin, Klaus-Michael, Deberardinis, Ralph J., Degterev, Alexei, Del Sal, Giannino, Deshmukh, Mohanish, Di Virgilio, Francesco, Diederich, Marc, Dixon, Scott J., Dynlacht, Brian D., El-Deiry, Wafik S., Elrod, John W., Engeland, Kurt, Fimia, Gian María, Galassi, Claudia, Ganini, Carlo, García-Sáez, Ana J., Garg, Abhishek D., Garrido, Carmen, Gavathiotis, Evripidis, Gerlic, Motti, Ghosh, Sourav, Green, Douglas R., Greene, Lloyd A., Gronemeyer, Hinrich, Häcker, Georg, Hajnóczky, György, Hardwick, J. Marie, Haupt, Ygal, He, Sudan, Heery, David M., Hengartner, Michael O., Hetz, Claudio, Hildeman, David A., Ichijo, Hidenori, Inoue, Satoshi, Jäättelä, Marja, Janic, Ana, Joseph, Bertrand, Jost, Philipp J., Kanneganti, Thirumala-Devi, Karin, Michael, Kashkar, Hamid, Kaufmann, Thomas, Kelly, Gemma L., Kepp, Oliver, Kimchi, Adi, Kitsis, Richard N., Klionsky, Daniel J., Kluck, Ruth, Krysko, Dmitri V., Kulms, Dagmar, Kumar, Sharad, Lavandero, Sergio, Lavrik, Inna N., Lemasters, John J., Liccardi, Gianmaria, Linkermann, Andreas, Lipton, Stuart A., Lockshin, Richard A., López-Otín, Carlos, Luedde, Tom, MacFarlane, Marion, Madeo, Frank, Malorni, Walter, Manic, Gwenola, Mantovani, Roberto, Marchi, Saverio, Marine, Jean-Christophe, Martin, Seamus J., Martinou, Jean-Claude, Mastroberardino, Pier G., Medema, Jan Paul, Mehlen, Patrick, Meier, Pascal, Melino, Gerry, Melino, Sonia, Miao, Edward A., Moll, Ute M., Muñoz-Pinedo, Cristina, Murphy, Daniel J., Niklison-Chirou, Maria Victoria, Novelli, Flavia, Núñez, Gabriel, Oberst, Andrew, Ofengeim, Dimitry, Opferman, Joseph T., Oren, Moshe, Pagano, Michele, Panaretakis, Theocharis, Pasparakis, Manolis, Penninger, Josef M., Pentimalli, Francesca, Pereira, David M., Pervaiz, Shazib, Peter, Marcus E., Pinton, Paolo, Porta, Giovanni, Prehn, Jochen H. M., Puthalakath, Hamsa, Rabinovich, Gabriel A., Rajalingam, Krishnaraj, Ravinchandran, Kodi S., Rehm, Markus, Ricci, Jean-Ehrland, Rizzuto, Rosario, Robinson, Nirmal, Rodrigues, Cecilia M. P., Rotblat, Barak, Rothlin, Carla V., Rubinsztein, David C., Rudel, Thomas, Rufini, Alessandro, Ryan, Kevin M., Sarosiek, Kristopher A., Sawa, Akira, Sayan, Emre, Schroder, Kate, Scorrano, Luca, Sesti, Federico, Shao, Feng, Shi, Yufang, Sica, Giuseppe, Silke, John, Simon, Hans-Uwe, Sistigu, Antonella, Stephanou, Anastasis, Stockwell, Brent R., Strappazzon, Flavie, Strasser, Andreas, Sun, Liming, Sun, Erwei, Sun, Qiang, Szabadkai, G, Tait, Stephen W. G., Tang, Daolin, Tavernarakis, Nektarios, Troy, Carol M., Turk, Boris, Urbano, Nicoletta, Vandenabeele, Peter, Vanden Berghe, Tom, Vander Heiden, Matthew G., Vanderluit, Jacqueline L., Verkhratsky, A., Villunger, Andreas, Von Karstedt, Silvia, Voss, Anne K., Vousden, Karen H., Vucic, Domagoj, Vuri, Daniela, Wagner, Erwin F., Walczak, Henning, Wallach, David, Wang, Ruoning, Wang, Ying, Weber, Achim, Wood, Will, Yamazaki, Takahiro, Yang, Zahra, Zakeri, Zahra, Zawacka-Pankau, Joanna E., Zhang, Lin, Zhang, Haibin, Zhivotovsky, Boris, Zhou, Wenzhao, Piacentini, Mauro, Kroemer, Guido, and Galluzzi, Lorenzo
- Abstract
Apoptosis is a form of regulated cell death (RCD) that involves proteases of the caspase family. Pharmacological and genetic strategies that experimentally inhibit or delay apoptosis in mammalian systems have elucidated the key contribution of this process not only to (post-)embryonic development and adult tissue homeostasis, but also to the etiology of multiple human disorders. Consistent with this notion, while defects in the molecular machinery for apoptotic cell death impair organismal development and promote oncogenesis, the unwarranted activation of apoptosis promotes cell loss and tissue damage in the context of various neurological, cardiovascular, renal, hepatic, infectious, neoplastic and inflammatory conditions. Here, the Nomenclature Committee on Cell Death (NCCD) gathered to critically summarize an abundant pre-clinical literature mechanistically linking the core apoptotic apparatus to organismal homeostasis in the context of disease.
- Published
- 2023
32. Methionine synthase is essential for cancer cell proliferation in physiological folate environments
- Author
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Massachusetts Institute of Technology. Department of Biology, Sullivan, Mark R, Darnell, Alicia M, Reilly, Montana F, Kunchok, Tenzin, Joesch-Cohen, Lena, Rosenberg, Daniel, Ali, Ahmed, Rees, Matthew G, Roth, Jennifer A, Lewis, Caroline A, Vander Heiden, Matthew G, Massachusetts Institute of Technology. Department of Biology, Sullivan, Mark R, Darnell, Alicia M, Reilly, Montana F, Kunchok, Tenzin, Joesch-Cohen, Lena, Rosenberg, Daniel, Ali, Ahmed, Rees, Matthew G, Roth, Jennifer A, Lewis, Caroline A, and Vander Heiden, Matthew G
- Abstract
Folate metabolism can be an effective target for cancer treatment. However, standard cell culture conditions utilize folic acid, a non-physiological folate source for most tissues. We find that the enzyme that couples folate and methionine metabolic cycles, methionine synthase, is required for cancer cell proliferation and tumour growth when 5-methyl tetrahydrofolate (THF), the major folate found in circulation, is the extracellular folate source. In such physiological conditions, methionine synthase incorporates 5-methyl THF into the folate cycle to maintain intracellular levels of the folates needed for nucleotide production. 5-methyl THF can sustain intracellular folate metabolism in the absence of folic acid. Therefore, cells exposed to 5-methyl THF are more resistant to methotrexate, an antifolate drug that specifically blocks folic acid incorporation into the folate cycle. Together, these data argue that the environmental folate source has a profound effect on folate metabolism, determining how both folate cycle enzymes and antifolate drugs impact proliferation.
- Published
- 2023
33. EED is required for mouse primordial germ cell differentiation in the embryonic gonad.
- Author
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Lowe, Matthew G, Lowe, Matthew G, Yen, Ming-Ren, Hsu, Fei-Man, Hosohama, Linzi, Hu, Zhongxun, Chitiashvili, Tsotne, Hunt, Timothy J, Gorgy, Isaac, Bernard, Matthew, Wamaitha, Sissy E, Chen, Pao-Yang, Clark, Amander T, Lowe, Matthew G, Lowe, Matthew G, Yen, Ming-Ren, Hsu, Fei-Man, Hosohama, Linzi, Hu, Zhongxun, Chitiashvili, Tsotne, Hunt, Timothy J, Gorgy, Isaac, Bernard, Matthew, Wamaitha, Sissy E, Chen, Pao-Yang, and Clark, Amander T
- Abstract
Development of primordial germ cells (PGCs) is required for reproduction. During PGC development in mammals, major epigenetic remodeling occurs, which is hypothesized to establish an epigenetic landscape for sex-specific germ cell differentiation and gametogenesis. In order to address the role of embryonic ectoderm development (EED) and histone 3 lysine 27 trimethylation (H3K27me3) in this process, we created an EED conditional knockout mouse and show that EED is essential for regulating the timing of sex-specific PGC differentiation in both ovaries and testes, as well as X chromosome dosage decompensation in testes. Integrating chromatin and whole genome bisulfite sequencing of epiblast and PGCs, we identified a poised repressive signature of H3K27me3/DNA methylation that we propose is established in the epiblast where EED and DNMT1 interact. Thus, EED joins DNMT1 in regulating the timing of sex-specific PGC differentiation during the critical window when the gonadal niche cells specialize into an ovary or testis.
- Published
- 2022
34. Elucidating the Structure and Composition of Individual Bimetallic Nanoparticles in Supported Catalysts by Atom Probe Tomography
- Author
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Zand, Florian, Hangx, Suzanne J.T., Spiers, Christopher J., van den Brink, Peter J., Burns, James, Boebinger, Matthew G., Poplawsky, Jonathan D., Monai, Matteo, Weckhuysen, Bert M., Zand, Florian, Hangx, Suzanne J.T., Spiers, Christopher J., van den Brink, Peter J., Burns, James, Boebinger, Matthew G., Poplawsky, Jonathan D., Monai, Matteo, and Weckhuysen, Bert M.
- Abstract
Understanding and controlling the structure and composition of nanoparticles in supported metal catalysts are crucial to improve chemical processes. For this, atom probe tomography (APT) is a unique tool, as it allows for spatially resolved three-dimensional chemical imaging of materials with sub-nanometer resolution. However, thus far APT has not been applied for mesoporous oxide-supported metal catalyst materials, due to the size and number of pores resulting in sample fracture during experiments. To overcome these issues, we developed a high-pressure resin impregnation strategy and showcased the applicability to high-porous supported Pd-Ni-based catalyst materials, which are active in CO2 hydrogenation. Within the reconstructed volume of 3 × 105 nm3, we identified over 400 Pd-Ni clusters, with compositions ranging from 0 to 16 atom % Pd and a size distribution of 2.6 ± 1.6 nm. These results illustrate that APT is capable of quantitatively assessing the size, composition, and metal distribution for a large number of nanoparticles at the sub-nm scale in industrial catalysts. Furthermore, we showcase that metal segregation occurred predominately between nanoparticles, shedding light on the mechanism of metal segregation. We envision that the presented methodology expands the capabilities of APT to investigate porous functional nanomaterials, including but not limited to solid catalysts.
- Published
- 2023
35. Worldwide Exploration of Renal Replacement Outcomes Collaborative in Kidney Disease (WE-ROCK)
- Author
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Menon, Shina, Menon, Shina, Krallman, Kelli A, Arikan, Ayse A, Fuhrman, Dana Y, Gorga, Stephen M, Mottes, Theresa, Ollberding, Nicholas, Ricci, Zaccaria, Stanski, Natalja L, Selewski, David T, Soranno, Danielle E, Zappitelli, Michael, Zang, Huaiyu, Gist, Katja M, Investigators, WE-ROCK, Ahern, Emily, Arikan, Ayse Akcan, Alhamoud, Issa, Alobaidi, Rashid, Anton-Martin, Pilar, Balani, Shanthi S, Barhight, Matthew, Basalely, Abby, Bigelow, Amee M, Bottari, Gabriella, Cappoli, Andrea, Ciccia, Eileen A, Collins, Michaela, Colosimo, Denise, Cortina, Gerard, Damian, Mihaela A, De la Mata Navazo, Sara, DeAbreu, Gabrielle, Deep, Akash, Ding, Kathy L, Dolan, Kristin J, Lafever, Sarah N Fernandez, Gelbart, Ben, Guzzi, Francesco, Guzzo, Isabella, Haga, Taiki, Harvey, Elizabeth, Hasson, Denise C, Hill-Horowitz, Taylor, Inthavong, Haleigh, Joseph, Catherine, Kaddourah, Ahmad, Kakajiwala, Aadil, Kessel, Aaron D, Korn, Sarah, Kwiatkowski, David M, Lee, Jasmine, Lequier, Laurance, Kia, Tina Madani, Mah, Kenneth E, Marinari, Eleonora, Martin, Susan D, Mohamed, Tahagod H, Morgan, Catherine, Mottes, Theresa A, Muff-Luett, Melissa A, Namachivayam, Siva, Neumayr, Tara M, Nhan, Jennifer, O'Rourke, Abigail, Ollberding, Nicholas J, Pinto, Matthew G, Qutob, Dua, Raggi, Valeria, Reynaud, Stephanie, Rumlow, Zachary A, Lozano, María J Santiago, See, Emily, Serpe, Carmela, Serratore, Alyssa, Shah, Ananya, Shih, Weiwen V, Shin, H Stella, Slagle, Cara L, Solomon, Sonia, Srivastava, Rachana, Starr, Michelle C, Stenson, Erin K, Strong, Amy E, Taylor, Susan A, Thadani, Sameer V, Uber, Amanda M, Van Wyk, Brynna, Webb, Tennille N, Zangla, Emily E, Menon, Shina, Menon, Shina, Krallman, Kelli A, Arikan, Ayse A, Fuhrman, Dana Y, Gorga, Stephen M, Mottes, Theresa, Ollberding, Nicholas, Ricci, Zaccaria, Stanski, Natalja L, Selewski, David T, Soranno, Danielle E, Zappitelli, Michael, Zang, Huaiyu, Gist, Katja M, Investigators, WE-ROCK, Ahern, Emily, Arikan, Ayse Akcan, Alhamoud, Issa, Alobaidi, Rashid, Anton-Martin, Pilar, Balani, Shanthi S, Barhight, Matthew, Basalely, Abby, Bigelow, Amee M, Bottari, Gabriella, Cappoli, Andrea, Ciccia, Eileen A, Collins, Michaela, Colosimo, Denise, Cortina, Gerard, Damian, Mihaela A, De la Mata Navazo, Sara, DeAbreu, Gabrielle, Deep, Akash, Ding, Kathy L, Dolan, Kristin J, Lafever, Sarah N Fernandez, Gelbart, Ben, Guzzi, Francesco, Guzzo, Isabella, Haga, Taiki, Harvey, Elizabeth, Hasson, Denise C, Hill-Horowitz, Taylor, Inthavong, Haleigh, Joseph, Catherine, Kaddourah, Ahmad, Kakajiwala, Aadil, Kessel, Aaron D, Korn, Sarah, Kwiatkowski, David M, Lee, Jasmine, Lequier, Laurance, Kia, Tina Madani, Mah, Kenneth E, Marinari, Eleonora, Martin, Susan D, Mohamed, Tahagod H, Morgan, Catherine, Mottes, Theresa A, Muff-Luett, Melissa A, Namachivayam, Siva, Neumayr, Tara M, Nhan, Jennifer, O'Rourke, Abigail, Ollberding, Nicholas J, Pinto, Matthew G, Qutob, Dua, Raggi, Valeria, Reynaud, Stephanie, Rumlow, Zachary A, Lozano, María J Santiago, See, Emily, Serpe, Carmela, Serratore, Alyssa, Shah, Ananya, Shih, Weiwen V, Shin, H Stella, Slagle, Cara L, Solomon, Sonia, Srivastava, Rachana, Starr, Michelle C, Stenson, Erin K, Strong, Amy E, Taylor, Susan A, Thadani, Sameer V, Uber, Amanda M, Van Wyk, Brynna, Webb, Tennille N, and Zangla, Emily E
- Abstract
IntroductionContinuous renal replacement therapy (CRRT) is used for the symptomatic management of acute kidney injury (AKI) and fluid overload (FO). Contemporary reports on pediatric CRRT are small and single center in design. Large international studies evaluating CRRT practice and outcomes are lacking. Herein, we describe the design of a multinational collaborative.MethodsThe Worldwide Exploration of Renal Replacement Outcomes Collaborative in Kidney Disease (WE-ROCK) is an international collaborative of pediatric specialists whose mission is to improve short- and long-term outcomes of children treated with CRRT. The aims of this multicenter retrospective study are to describe the epidemiology, liberation patterns, association of fluid balance and timing of CRRT initiation, and CRRT prescription with outcomes.ResultsWe included children (n = 996, 0-25 years) admitted to an intensive care unit (ICU) and treated with CRRT for AKI or FO at 32 centers (in 7 countries) from 2018 to 2021. Demographics and clinical characteristics before CRRT initiation, during the first 7 days of both CRRT, and liberation were collected. Outcomes include the following: (i) major adverse kidney events at 90 days (mortality, dialysis dependence, and persistent kidney dysfunction), and (ii) functional outcomes (functional stats scale).ConclusionThe retrospective WE-ROCK study represents the largest international registry of children receiving CRRT for AKI or FO. It will serve as a broad and invaluable resource for the field of pediatric critical care nephrology that will improve our understanding of practice heterogeneity and the association of CRRT with clinical and patient-centered outcomes. This will generate preliminary data for future interventional trials in this area.
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- 2023
36. Single-cell methylation analysis of brain tissue prioritizes mutations that alter transcription
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Flint, Jonathan, Flint, Jonathan, Heffel, Matthew G, Chen, Zeyuan, Mefford, Joel, Marcus, Emilie, Chen, Patrick B, Ernst, Jason, Luo, Chongyuan, Flint, Jonathan, Flint, Jonathan, Heffel, Matthew G, Chen, Zeyuan, Mefford, Joel, Marcus, Emilie, Chen, Patrick B, Ernst, Jason, and Luo, Chongyuan
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Relating genetic variants to behavior remains a fundamental challenge. To assess the utility of DNA methylation marks in discovering causative variants, we examined their relationship to genetic variation by generating single-nucleus methylomes from the hippocampus of eight inbred mouse strains. At CpG sequence densities under 40 CpG/Kb, cells compensate for loss of methylated sites by methylating additional sites to maintain methylation levels. At higher CpG sequence densities, the exact location of a methylated site becomes more important, suggesting that variants affecting methylation will have a greater effect when occurring in higher CpG densities than in lower. We found this to be true for a variant's effect on transcript abundance, indicating that candidate variants can be prioritized based on CpG sequence density. Our findings imply that DNA methylation influences the likelihood that mutations occur at specific sites in the genome, supporting the view that the distribution of mutations is not random.
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- 2023
37. Aneuploidy-associated SQLE gain promotes prostate cancer aggressiveness by altering lipid metabolism
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Surgery, SOM, Thomas Janas, Konrad H. Stopsack, Daniel R. Schmidt, Duanduan Ma, Zhe Li, Matthew G. Vander Heiden, Kathryn L. Penny, Paul A. Scheet, Tamara L. Lotan, Angelika Amon, Lorelei A. Mucci, Xiaofeng A. Su, Surgery, SOM, Thomas Janas, and Konrad H. Stopsack, Daniel R. Schmidt, Duanduan Ma, Zhe Li, Matthew G. Vander Heiden, Kathryn L. Penny, Paul A. Scheet, Tamara L. Lotan, Angelika Amon, Lorelei A. Mucci, Xiaofeng A. Su
- Abstract
Background Conclusions Systems and Pathway Resul ts Prostate cancer (PCa) is the second leading cause of cancer-related death in men in the US. Epidemiology studies on primary PCa cohorts in Physicians' Health Study and Health Professionals Follow-up Study (PHS and HPFS) have shown that high levels of whole-genome aneuploidy, featured by imbalanced chromosome numbers, correlate with lethal progression in PCa. However, details of the mechanisms of how aneuploidy drives PCa aggressiveness are still unclear. Here, we used the case of chromosome 8q (chr 8q, the long arm of chr 8) gain to study aneuploidy-associated prostatic malignancies. Chr 8q gains are the most frequent gain events that occur in approximately 23% of PCa cases. By using the PHS and HPFS cohorts, we modeled the increased expression of each gene located on chr 8q, for predicting the risks for lethal progression, and obtained each corresponding gene’s odds ratio (OR). By ranking the ORs, we revealed that a cholesterol biosynthesis gene, squalene monooxygenase (SQLE), is one of the top associators with lethal progression, amongst all chr 8q genes. SQLE plays a pivotal role in cholesterol synthesis. Previous lymphoma studies have shown that loss of SQLE as a cause of cholesterol auxotrophy, and when SQLE is present, squalene alters the lipid profile and protects against oxidative cell death. In our experimental study, we have used normal and cancerous TMPRSS2-ERG-driven organoid models and found that over-expression of SQLE promotes formation of invasive structures and proliferation in cancer organoids. Interestingly, overexpression of SQLE decreased the protein levels of TMPRSS2-ERG, which appeared to be independent of androgen receptor levels. We also utilized the TMPRSS2-ERG positive VCaP cell line, which harbors gains of SQLE gene copies. We found that knocking down SQLE expression significantly upregulated ERG protein levels. Our recent study has shown that ERG (or other ETS) positive prostate cancers, RITM0041128, Prostate cancer (PCa) is the second leading cause of cancer-related death in men in the US. Epidemiology studies on primary PCa cohorts in Physicians' Health Study and Health Professionals Follow-up Study (PHS and HPFS) have shown that high levels of whole-genome aneuploidy, featured by imbalanced chromosome numbers, correlate with lethal progression in PCa. However, details of the mechanisms of how aneuploidy drives PCa aggressiveness are still unclear. Here, we used the case of chromosome 8q (chr 8q, the long arm of chr 8) gain to study aneuploidy-associated prostatic malignancies. Chr 8q gains are the most frequent gain events that occur in approximately 23% of PCa cases. By using the PHS and HPFS cohorts, we modeled the increased expression of each gene located on chr 8q, for predicting the risks for lethal progression, and obtained each corresponding gene’s odds ratio (OR). By ranking the ORs, we revealed that a cholesterol biosynthesis gene, squalene monooxygenase (SQLE), is one of the top associators with lethal progression, amongst all chr 8q genes. SQLE plays a pivotal role in cholesterol synthesis. Previous lymphoma studies have shown that loss of SQLE as a cause of cholesterol auxotrophy, and when SQLE is present, squalene alters the lipid profile and protects against oxidative cell death. In our experimental study, we have used normal and cancerous TMPRSS2-ERG-driven organoid models and found that overexpression of SQLE promotes formation of invasive structures and proliferation in cancer organoids. Interestingly, overexpression of SQLE decreased the protein levels of TMPRSS2-ERG, which appeared to be independent of androgen receptor levels. We also utilized the TMPRSS2-ERG positive VCaP cell line, which harbors gains of SQLE gene copies. We found that knocking down SQLE expression significantly upregulated ERG protein levels. Our recent study has shown that ERG (or other ETS) positive prostate cancers have a strong correlation with downregulation of fat
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- 2023
38. High-LET Radiation Induces Less Injury in the bone marrow of Female Mice than in Male Mice due to Increasing IL-2 and SAA, Maintaining CD27, and Lowering the miR-34a-Regulated Pyroptosis in Female Mice
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Scientific Research Department (SRD), AFRRI, Juliann Kiang, Matthew G. Olson, Akeylah K. Woods, Georgetta Cannon, Scientific Research Department (SRD), AFRRI, Juliann Kiang, and Matthew G. Olson, Akeylah K. Woods, Georgetta Cannon
- Abstract
High-LET radiation induces less injury in the bone marrow of female mice than in male mice due to increasing IL-2 and SAA, maintaining CD27, and lowering the miR-34a-regulated pyroptosisin female mice RESULTS MATERIALS & METHDS INTRODUCTION ExposurePreviousreportshaveindicatedthatmixed-field(neutron+gamma)irradiationcausessignificantlyincreasedmortality,decreasedsurvivaltimeandlatencyinacuteradiationsyndrome(ARS),andevendelayedhealingofinjuries(woundand/orburn)sufferedincombinationwithradiation[LedneyandElliott2010]comparedwithpurephotonirradiation.Asmechanismsofinjurybylow-LETradiationaredifferentfromthoseofhigh-LETradiation,thismayaffectdoseassessmentandcountermeasureefficacy[MacVittieetal.1991;Ledneyetal.1991and2000;Caryetal.2012].High-LETincreasesC-reactiveprotein(CRP),complementcomponent3(C3),IgMandPGE2incirculation[KiangandLedney,2013].Moreover,reductionofbloodcellcountsandincreasesincirculatingIL-18,G-CSFandGM-CSFafterhigh-LET[Ossetrovaetal.,2018a]aregreaterthanthatobservedafterlow-LET[Ossetrovaetal.,2018b;Kiangetal.,2018].In2018,SusannaRosiandhercolleagues[Krukowskietal.,2018]investigatedforthefirsttimehowcombinedgalacticcosmicradiation(GCR)exposureimpactslong-termbehavioralandcellularresponsesinmaleandfemalemousebrains.TheyfoundthatasingleexposuretosimulatedGCRinducedlong-termcognitiveandbehavioraldeficitsinmalecohorts,includingdiminishedsocialinteraction,increasedanxiety-likephenotypeandimpairedrecognitionmemory.Remarkably,femalecohortsdidnotdisplayanycognitiveorbehavioraldeficitsafterGCRexposure.Theirresultsidentifiedsex-dependentdifferencesinbehavioralandcognitivedomains.Inconcordancewiththesefindings,ourpreviousreports[Kiangetal.,2022]observedthathigh-LETradiationinducedhigherlevelsofmiR-34ainmaleileumcomparedtofemaleileum.Moreover,histologicalexaminationsofsternumsandileumsalongwithassessmentsoftheirtissuecitrullinelevels(biomarkerforentero-epithelialcellproliferation)suggestedorganinjurytobemoresevereinmalesthanfemales.Inthisreport,weinvestigatedbiomo, RITM0041736, Overexposure to ionizing radiation (IR) is life-threatening in nuclear and radiological incidents. IR depletes blood cell sand increases circulating cytokine/chemokine concentrations as well as mortality. It is reported that microglia cells of female mice are less damaged than those in male mice by IR. We have reported that the GI of female mice is more resistant to IR than the GI of male mice mediated by increases in G-CSF which down-regulate the IR-induced elevation of miR-34a and Bax, leading to decreases in both caspase 3-dependent apoptosis and caspase 1-dependent pyroptosis. It is unclear whether sex varied physiopathological responses in bone marrow (BM) and/or how it happened. We exposed B6D2F1 male and female mice to 0,1.5,3,or 6 Gy with radiation containing 67% neutrons and 33% gamma at 0.6 Gy/min. Blood, sternums and femurs were collected on days 1, 4,and 7. On day 7, IR increased adipocytes and depleted BM cells and megakaryocytes in a radiation dose-dependent manner. However, females exhibited less damage in sternum BM histology than males, which was also confirmed with Flt-3 lig and measurements. IR increased cytokines/chemokines in femurs of females and males in a dose-dependent manner, Cytokines and chemokines generally peaked on day 4 and declined on day 7 in femoral BM cells of both males and females. However, IL-2 (a promoter of T reg cells) increased on days 1 and 4 and returned to the baseline on day 7 in females but decreased on days 4 and 7 in males. IR persistently increased serum amyloid A (SAA) and maintained CD 27 (for Ig production) from day 1 to day 7 in females, where as IR decreased both on day 7 in males. MiR-34a is known to trigger gasderm in D-mediated pyroptosis viacaspase-1 activation. IR significantly increased mi R-34a, caspase-1 activation and gasderm in D activation in males but did little in females, suggesting the presence of pyroptosis in males but not females. No apoptosis was found with BM. The results indicate that BM in
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- 2023
39. OptoRheo : Simultaneous in situ micro-mechanical sensing and imaging of live 3D biological systems
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Mendonca, Tania, Lis-Slimak, Katarzyna, Matheson, Andrew B., Smith, Matthew G., Anane-Adjei, Akosua B., Ashworth, Jennifer C., Cavanagh, Robert, Paterson, Lynn, Dalgarno, Paul A., Alexander, Cameron, Tassieri, Manlio, Merry, Catherine L. R., Wright, Amanda J., Mendonca, Tania, Lis-Slimak, Katarzyna, Matheson, Andrew B., Smith, Matthew G., Anane-Adjei, Akosua B., Ashworth, Jennifer C., Cavanagh, Robert, Paterson, Lynn, Dalgarno, Paul A., Alexander, Cameron, Tassieri, Manlio, Merry, Catherine L. R., and Wright, Amanda J.
- Abstract
A new instrument named OptoRheo combines light sheet fluorescence microscopy and particle tracking microrheology for live imaging and micromechanical sensing of extracellular matrix-cell interactions. Biomechanical cues from the extracellular matrix (ECM) are essential for directing many cellular processes, from normal development and repair, to disease progression. To better understand cell-matrix interactions, we have developed a new instrument named 'OptoRheo' that combines light sheet fluorescence microscopy with particle tracking microrheology. OptoRheo lets us image cells in 3D as they proliferate over several days while simultaneously sensing the mechanical properties of the surrounding extracellular and pericellular matrix at a sub-cellular length scale. OptoRheo can be used in two operational modalities (with and without an optical trap) to extend the dynamic range of microrheology measurements. We corroborated this by characterising the ECM surrounding live breast cancer cells in two distinct culture systems, cell clusters in 3D hydrogels and spheroids in suspension culture. This cutting-edge instrument will transform the exploration of drug transport through complex cell culture matrices and optimise the design of the next-generation of disease models.
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- 2023
- Full Text
- View/download PDF
40. Solar Wind Protons in the Diamagnetic Cavity at Comet 67P/Churyumov-Gerasimenko
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Goetz, Charlotte, Scharre, Lucie, Wedlund, Cyril Simon, Moeslinger, Anja, Nilsson, Hans, Odelstad, Elias, Taylor, Matthew G. G. T., Volwerk, Martin, Goetz, Charlotte, Scharre, Lucie, Wedlund, Cyril Simon, Moeslinger, Anja, Nilsson, Hans, Odelstad, Elias, Taylor, Matthew G. G. T., and Volwerk, Martin
- Abstract
The plasma environment at a comet can be divided into different regions with distinct plasma characteristics. Two such regions are the solar wind ion cavity, which refers to the part of the outer coma that does not contain any solar wind ions anymore; and the diamagnetic cavity, which is the region of unmagnetized plasma in the innermost coma. From theory and previous observations, it was thought that under usual circumstances no solar wind ion should be observable near or inside of the diamagnetic cavity. For the first time, we report on five observations that show that protons near solar wind energies can also be found inside the diamagnetic cavity. We characterize these proton signatures, where and when they occur, and discuss possible mechanisms that could lead to protons penetrating the inner coma and traversing the diamagnetic cavity boundary. By understanding these observations, we hope to better understand the interaction region of the comet with the solar wind under nonstandard conditions. The protons detected inside the diamagnetic cavity have directions and energies consistent with protons of solar wind origin. The five events occur only at intermediate gas production rates and low cometocentric distances. Charge transfer reactions, high solar wind dynamic pressure and a neutral gas outburst can be ruled out as causes. We suggest that the anomalous appearance of protons in the diamagnetic cavity is due to a specific solar wind configuration where the solar wind velocity is parallel to the interplanetary magnetic field, thus inhibiting mass-loading and deflection.
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- 2023
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41. COST SAVINGS OF TAXING LOWER-RANKING, NON-DEPENDENT MEMBERS’ BASIC ALLOWANCE FOR HOUSING FOR COLLOCATED MILITARY COUPLES
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Sullivan, Ryan S., Department of Defense Management (DDM), Heidt, Matthew G., Sanchez, Michael A., Sullivan, Ryan S., Department of Defense Management (DDM), Heidt, Matthew G., and Sanchez, Michael A.
- Abstract
The U.S. federal deficit continues to grow yearly and is approximately $1.719 trillion for fiscal year (FY) 2022, further increasing the national debt to approximately $31.1 trillion. Our research examines possible cost-saving measures available within the Basic Allowance for Housing (BAH) program, specifically a tax on the BAH of the lower-ranking, non-dependent service members within military collocated couples. We utilized data from the Defense Manpower Data Center (DMDC) to define the population data for all military collocated couples for June 2022. Of the approximate $25.6 billion in BAH paid to service members in FY22, our estimates indicate approximately $1.25 billion is paid to the lower-ranking, non-dependent members of collocated military couples. Additionally, our estimates indicate that officers would pay a 15% higher amount in tax paid than enlisted. Our analysis suggests that potential cost savings of approximately $284.5 million annually can be achieved by instituting a tax on these members’ BAH allowances plus their base pay at a tax rate commensurate with the total of both. An alternative approach provides a cost savings of approximately $151.4 million annually attained by taxing only these service members’ BAH at a tax rate commensurate with the total of the BAH alone., Lieutenant Commander, United States Navy, Lieutenant Junior Grade, United States Navy, Approved for public release. Distribution is unlimited.
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- 2023
42. Insights into mammalian TE diversity through the curation of 248 genome assemblies
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Osmanski, Austin B., Paulat, Nicole S., Korstian, Jenny, Grimshaw, Jenna R., Halsey, Michaela, Sullivan, Kevin A. M., Moreno-Santillan, Diana D., Crookshanks, Claudia, Roberts, Jacquelyn, Garcia, Carlos, Johnson, Matthew G., Densmore, Llewellyn D., Stevens, Richard D., Rosen, Jeb, Storer, Jessica M., Hubley, Robert, Smit, Arian F. A., Davalos, Liliana M., Karlsson, Elinor K., Lindblad-Toh, Kerstin, Ray, David A., Osmanski, Austin B., Paulat, Nicole S., Korstian, Jenny, Grimshaw, Jenna R., Halsey, Michaela, Sullivan, Kevin A. M., Moreno-Santillan, Diana D., Crookshanks, Claudia, Roberts, Jacquelyn, Garcia, Carlos, Johnson, Matthew G., Densmore, Llewellyn D., Stevens, Richard D., Rosen, Jeb, Storer, Jessica M., Hubley, Robert, Smit, Arian F. A., Davalos, Liliana M., Karlsson, Elinor K., Lindblad-Toh, Kerstin, and Ray, David A.
- Abstract
We examined transposable element (TE) content of 248 placental mammal genome assemblies, the largest de novo TE curation effort in eukaryotes to date. We found that although mammals resemble one another in total TE content and diversity, they show substantial differences with regard to recent TE accumulation. This includes multiple recent expansion and quiescence events across the mammalian tree. Young TEs, particularly long interspersed elements, drive increases in genome size, whereas DNA transposons are associated with smaller genomes. Mammals tend to accumulate only a few types of TEs at any given time, with one TE type dominating. We also found association between dietary habit and the presence of DNA transposon invasions. These detailed annotations will serve as a benchmark for future comparative TE analyses among placental mammals.
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- 2023
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43. Solar Wind Protons in the Diamagnetic Cavity at Comet 67P/Churyumov-Gerasimenko
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Goetz, Charlotte, Scharre, Lucie, Wedlund, Cyril Simon, Moeslinger, Anja, Nilsson, Hans, Odelstad, Elias, Taylor, Matthew G. G. T., Volwerk, Martin, Goetz, Charlotte, Scharre, Lucie, Wedlund, Cyril Simon, Moeslinger, Anja, Nilsson, Hans, Odelstad, Elias, Taylor, Matthew G. G. T., and Volwerk, Martin
- Abstract
The plasma environment at a comet can be divided into different regions with distinct plasma characteristics. Two such regions are the solar wind ion cavity, which refers to the part of the outer coma that does not contain any solar wind ions anymore; and the diamagnetic cavity, which is the region of unmagnetized plasma in the innermost coma. From theory and previous observations, it was thought that under usual circumstances no solar wind ion should be observable near or inside of the diamagnetic cavity. For the first time, we report on five observations that show that protons near solar wind energies can also be found inside the diamagnetic cavity. We characterize these proton signatures, where and when they occur, and discuss possible mechanisms that could lead to protons penetrating the inner coma and traversing the diamagnetic cavity boundary. By understanding these observations, we hope to better understand the interaction region of the comet with the solar wind under nonstandard conditions. The protons detected inside the diamagnetic cavity have directions and energies consistent with protons of solar wind origin. The five events occur only at intermediate gas production rates and low cometocentric distances. Charge transfer reactions, high solar wind dynamic pressure and a neutral gas outburst can be ruled out as causes. We suggest that the anomalous appearance of protons in the diamagnetic cavity is due to a specific solar wind configuration where the solar wind velocity is parallel to the interplanetary magnetic field, thus inhibiting mass-loading and deflection.
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- 2023
- Full Text
- View/download PDF
44. OptoRheo : Simultaneous in situ micro-mechanical sensing and imaging of live 3D biological systems
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Mendonca, Tania, Lis-Slimak, Katarzyna, Matheson, Andrew B., Smith, Matthew G., Anane-Adjei, Akosua B., Ashworth, Jennifer C., Cavanagh, Robert, Paterson, Lynn, Dalgarno, Paul A., Alexander, Cameron, Tassieri, Manlio, Merry, Catherine L. R., Wright, Amanda J., Mendonca, Tania, Lis-Slimak, Katarzyna, Matheson, Andrew B., Smith, Matthew G., Anane-Adjei, Akosua B., Ashworth, Jennifer C., Cavanagh, Robert, Paterson, Lynn, Dalgarno, Paul A., Alexander, Cameron, Tassieri, Manlio, Merry, Catherine L. R., and Wright, Amanda J.
- Abstract
A new instrument named OptoRheo combines light sheet fluorescence microscopy and particle tracking microrheology for live imaging and micromechanical sensing of extracellular matrix-cell interactions. Biomechanical cues from the extracellular matrix (ECM) are essential for directing many cellular processes, from normal development and repair, to disease progression. To better understand cell-matrix interactions, we have developed a new instrument named 'OptoRheo' that combines light sheet fluorescence microscopy with particle tracking microrheology. OptoRheo lets us image cells in 3D as they proliferate over several days while simultaneously sensing the mechanical properties of the surrounding extracellular and pericellular matrix at a sub-cellular length scale. OptoRheo can be used in two operational modalities (with and without an optical trap) to extend the dynamic range of microrheology measurements. We corroborated this by characterising the ECM surrounding live breast cancer cells in two distinct culture systems, cell clusters in 3D hydrogels and spheroids in suspension culture. This cutting-edge instrument will transform the exploration of drug transport through complex cell culture matrices and optimise the design of the next-generation of disease models.
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- 2023
- Full Text
- View/download PDF
45. Solar Wind Protons in the Diamagnetic Cavity at Comet 67P/Churyumov-Gerasimenko
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Goetz, Charlotte, Scharre, Lucie, Wedlund, Cyril Simon, Moeslinger, Anja, Nilsson, Hans, Odelstad, Elias, Taylor, Matthew G. G. T., Volwerk, Martin, Goetz, Charlotte, Scharre, Lucie, Wedlund, Cyril Simon, Moeslinger, Anja, Nilsson, Hans, Odelstad, Elias, Taylor, Matthew G. G. T., and Volwerk, Martin
- Abstract
The plasma environment at a comet can be divided into different regions with distinct plasma characteristics. Two such regions are the solar wind ion cavity, which refers to the part of the outer coma that does not contain any solar wind ions anymore; and the diamagnetic cavity, which is the region of unmagnetized plasma in the innermost coma. From theory and previous observations, it was thought that under usual circumstances no solar wind ion should be observable near or inside of the diamagnetic cavity. For the first time, we report on five observations that show that protons near solar wind energies can also be found inside the diamagnetic cavity. We characterize these proton signatures, where and when they occur, and discuss possible mechanisms that could lead to protons penetrating the inner coma and traversing the diamagnetic cavity boundary. By understanding these observations, we hope to better understand the interaction region of the comet with the solar wind under nonstandard conditions. The protons detected inside the diamagnetic cavity have directions and energies consistent with protons of solar wind origin. The five events occur only at intermediate gas production rates and low cometocentric distances. Charge transfer reactions, high solar wind dynamic pressure and a neutral gas outburst can be ruled out as causes. We suggest that the anomalous appearance of protons in the diamagnetic cavity is due to a specific solar wind configuration where the solar wind velocity is parallel to the interplanetary magnetic field, thus inhibiting mass-loading and deflection.
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- 2023
- Full Text
- View/download PDF
46. OptoRheo : Simultaneous in situ micro-mechanical sensing and imaging of live 3D biological systems
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Mendonca, Tania, Lis-Slimak, Katarzyna, Matheson, Andrew B., Smith, Matthew G., Anane-Adjei, Akosua B., Ashworth, Jennifer C., Cavanagh, Robert, Paterson, Lynn, Dalgarno, Paul A., Alexander, Cameron, Tassieri, Manlio, Merry, Catherine L. R., Wright, Amanda J., Mendonca, Tania, Lis-Slimak, Katarzyna, Matheson, Andrew B., Smith, Matthew G., Anane-Adjei, Akosua B., Ashworth, Jennifer C., Cavanagh, Robert, Paterson, Lynn, Dalgarno, Paul A., Alexander, Cameron, Tassieri, Manlio, Merry, Catherine L. R., and Wright, Amanda J.
- Abstract
A new instrument named OptoRheo combines light sheet fluorescence microscopy and particle tracking microrheology for live imaging and micromechanical sensing of extracellular matrix-cell interactions. Biomechanical cues from the extracellular matrix (ECM) are essential for directing many cellular processes, from normal development and repair, to disease progression. To better understand cell-matrix interactions, we have developed a new instrument named 'OptoRheo' that combines light sheet fluorescence microscopy with particle tracking microrheology. OptoRheo lets us image cells in 3D as they proliferate over several days while simultaneously sensing the mechanical properties of the surrounding extracellular and pericellular matrix at a sub-cellular length scale. OptoRheo can be used in two operational modalities (with and without an optical trap) to extend the dynamic range of microrheology measurements. We corroborated this by characterising the ECM surrounding live breast cancer cells in two distinct culture systems, cell clusters in 3D hydrogels and spheroids in suspension culture. This cutting-edge instrument will transform the exploration of drug transport through complex cell culture matrices and optimise the design of the next-generation of disease models.
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- 2023
- Full Text
- View/download PDF
47. The ChatGPT Artificial Intelligence Chatbot: How Well Does It Answer Accounting Assessment Questions?
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Wood, David A., Achhpilia, M.P., Adams, Mollie T., Aghazadeh, Sanaz, Akinyele, Kazeem, Akpan, Mfon, Allee, Kristian D., Allen, Abigail M., Almer, Elizabeth D., Ames, Daniel, Arity, Viktor, Barr-Pulliam, Dereck, Basoglu, K. Asli, Belnap, Andrew, Bentley, Jeremiah W., Berg, Terje, Berglund, Nathan R., Berry, Erica, Bhandari, Avishek, Bhuyan, Md Nazmul Hasan, Black, Paul W., Blondeel, Eva, Bond, David, Bonrath, Annika, Borthick, A. Faye, Boyle, Erik S., Bradford, Marianne, Brandon, Duane M., Brazel, Joseph F., Brockbank, Bryan G., Burger, Marcus, Byzalov, Dmitri, Cannon, James N., Caro, Cecil, Carr, Abraham H., Cathey, Jack, Cating, Ryan, Charron, Kimberly, Chavez, Stacy, Chen, Jason, Chen, Jennifer C., Chen, Jennifer W., Cheng, Christine, Cheng, Xu, Christensen, Brant E., Church, Kimberly Swanson, Cicone, N. J., Constance, Patience, Cooper, Lauren A., Correia, Candice L., Coyne, Joshua, Cram, W. Alec, Curtis, Asher, Daigle, Ronald J., Dannemiller, Steve, Davenport, Stephan A., Dawson, Gregory S., Meyst, K.J.L. de, Dell, Scott, Demirkan, Sebahattin, Denison, Christine A., Desai, Hrishikesh, DeSimone, Steven, Diehl, Leah M., Dimes, Ruth, Dong, Bei, Donnelly, Amy, du Pon, Adam, Duan, Huijue Kelly, Duffey, Ada, Dunn, Ryan T., Durkin, Mary P., Dzuranin, Ann C., Eberle, Rachel M., Ege, Matthew S., El Mahdy, Dina, Esplin, Adam, Eulerich, Marc, Everaert, Patricia, Farah, Nusrat, Farish, Lauren, Favere-Marchesi, Michael, Fayard, Dutch, Filosa, Jessica R., Ford, Melinda, Franz, Diana R., Fulmer, Bachman P., Fulmer, Sarah, Furner, Zhan Z., Gantman, Sonia, Garner, Steve, Garrett, Jace, Geng, Xin, Golden, Joanna, Goldman, William, Gomez, Josue, Gooley, Mark, Granitto, Shawn P., Green, Karen Y., Greenman, Cindy L., Gupta, Gaurav, Guymon, Ronald N., Hale, Kevin, Harper, Christopher J., Hartt, S. Allen, Hawk, Holly, Hawkins, Steven R., Hawkins, Erin M., Hay, David C., Heinzelmann, Rafael, Henderson, Cassy D., Hendricks, Bradley E., Heninger, William G., Hill, Mary S., Holden, Nicole, Holderness, D. Kip, Jr., Holt, Travis P., Hoopes, Jeffrey L., Hsieh, Sheng-Feng, Huang, Feiqi, Huang, Hua-Wei, Huang, Ting-Chiao, Huels, Brian W., Hunter, Kara, Hurley, Patrick J., Inger, Kerry, Islam, Sharif, Ison, Isaac, Issa, Hussein, Jackson, Andrew B., Jackson, Scott C., Janvrin, Diane J., Jimenez, Peggy D., Johanson, Daniel, Judd, J. Scott, Kawada, Brett S., Kelton, Andrea Seaton, Kern, Sara, Kerr, Jon N., Keune, Marsha B., Kim, Mindy (Hyo Jung), Knox, Brian D., Kogan, Gregory, Kotb, Amr, Krane, Ronja, Kremin, Joleen, Krieg, Kimberly S., Kugel, Jonathan, Kulset, Ellen M., Kuruppu, Chamara, LaDuca, Garrison, Lamberton, Barbara A., Lamboy-Ruiz, Melvin A., Lang, Bradley, Larocque, Stephannie A., Larson, Melissa P., Lawson, Bradley P., Lawson, James G., Lee, Lorraine, Lenk, Margarita M., Li-Kuehne, Michelle, Liljegren, Jonathan, Lin, Yi-Hung, Liu, Wu-Po, Liu, Zishang, Lock, Brandon, Long, James H., Loraas, Tina, Lowensohn, Suzanne, Loy, Thomas R., Lyngstadaas, Hakim, Maas, Wim, MacGregor, Jason E., Madsen, Dag Øivind, Malone, Carissa L., Margolin, Maximilian, Marshall, Mary E., Martin, Rachel M., Mpofu, Colleen McClain, McCoy, Chris, McGuigan, Nicholas C., McSwain, Dwayne N., Meckfessel, Michele D., Mellon, Mark J., Melton, Olivia S., Mercado, Julie M., Mitsuda, Steven, Modugu, Kennedy, Moehrle, Stephen, Chaghervand, Amirali Moeini, Moffitt, Kevin, Moon, Joon Seok, Muehlmann, Brigitte, Murray, Johnna, Mwaungulu, Emmanuel S., Myers, Noah, Naegle, J. Conrad, Jr., Ndicu, Martin J., Nelson, Aaron S., Nguyen, Anh L., Niederkofler, N.T., Nikbakht, Ehsan, O'Brien, Ann D., Ogunade, Kehinde M., O'Leary, Daniel, Oler, Mitchell J., Oler, Derek K., Olsen, Kari Joseph, Otalor, John I., Outlaw, Kyle W., Ozlanski, Michael. E., Parlier, Jenny, Paterson, Jeffrey S., Pearson, Christopher A., Petersen, Michael J., Petra, Steven T., Pickard, Matthew D., Pickerd, Jeffrey, Pinsker, Robert, Plante, Catherine, Plečnik, James M., Price, Richard A., III, Quick, Linda A., Raedy, Jana, Raschke, Robyn, Ravenscraft, Julie, Richardson, Vernon, Rixom, Brett A., Robertson, John F., Rock, Iyad, Romney, Miles A., Rozario, Andrea, Ruff, Michael F., Rupley, Kathleen, Saeedi, Ali, Saiewitz, Aaron, Salzsieder, Leigh W., Sarkar, Sayan, Saulls, Michael, Scanlan, Tialei A., Schaefer, Tammie J., Schaupp, Daniel, Schneider, Gary P., Seebeck, Andreas, Sellers, R. Drew, Seto, Samantha C., Sevel, Romi-Lee, Shan, Yuxin, Sherwood, Matthew G., Singorahardjo, Maggie, Skaftadottir, Hanna Kristin, Skomra, Justyna, Smith, Jason L., Smith, Dallin O., Smith, James, Snow, Mason C., Sommerfeldt, Ryan D., Sorensen, Kate B., Sorensen, Trevor L., Spieler, Andrew C., Stallings, Matthew A., Stallings, Lesya, Stancill, Alan, Stanley, Jonathan D., Stefaniak, Chad M., Stephens, Nathaniel M., Stewart, Bryan W., Stratopoulos, Theophanis C., Street, Daniel A., Subedi, Meena, Summers, Scott L., Sundkvist, Charlotte H., Synn, Christina, Tadesse, Amanuel, Tapis, Gregory P., Tassin, Kerri, Taylor, Samantha, Teal, Mary, Teeter, Ryan, Tharapos, Meredith, Theis, Jochen C., Thomas, Jack, Thompson, Kristen S., Thornock, Todd A., Tietz, Wendy, Travalent, Anthony M., Trinkle, Brad S., Truelson, J. Mike, Turner, Michael C., Vagner, Brandon, Vakilzadeh, Hamid, van der Geest, Jesse, van Pelt, Victor, Vandervelde, Scott D., Vega, Jose, Vera-Muñoz, Sandra, Villanueva, Brigham, Vincent, Nishani Edirisinghe, Wagener, Martin, Walton, Stephanie, Warne, Rick C., Watanabe, Olena V., Watson, David, Watson, Marcia Weidenmier, Weber, Jill, Weirich, Thomas, West, Ashley N., Wilford, Amanda L., Wilson, Aaron B., Winrow, Brian, Winrow, Timothy, Winrow, Tasia S., Wiseman, Denise, Witte, Annie L., Wood, Bryan D., Wood, Jessica, Woolley, Darryl, Wright, Nicole S., Wu, Juan, Xiong, Xiaomei (Grazia), Yatsenko, Dimitri, Yazzie, Courtney E., Young, Glen M., Zhang, Chanyuan (Abigail), Zimmerman, Aleksandra B., Zoet, Emily, Wood, David A., Achhpilia, M.P., Adams, Mollie T., Aghazadeh, Sanaz, Akinyele, Kazeem, Akpan, Mfon, Allee, Kristian D., Allen, Abigail M., Almer, Elizabeth D., Ames, Daniel, Arity, Viktor, Barr-Pulliam, Dereck, Basoglu, K. Asli, Belnap, Andrew, Bentley, Jeremiah W., Berg, Terje, Berglund, Nathan R., Berry, Erica, Bhandari, Avishek, Bhuyan, Md Nazmul Hasan, Black, Paul W., Blondeel, Eva, Bond, David, Bonrath, Annika, Borthick, A. Faye, Boyle, Erik S., Bradford, Marianne, Brandon, Duane M., Brazel, Joseph F., Brockbank, Bryan G., Burger, Marcus, Byzalov, Dmitri, Cannon, James N., Caro, Cecil, Carr, Abraham H., Cathey, Jack, Cating, Ryan, Charron, Kimberly, Chavez, Stacy, Chen, Jason, Chen, Jennifer C., Chen, Jennifer W., Cheng, Christine, Cheng, Xu, Christensen, Brant E., Church, Kimberly Swanson, Cicone, N. J., Constance, Patience, Cooper, Lauren A., Correia, Candice L., Coyne, Joshua, Cram, W. Alec, Curtis, Asher, Daigle, Ronald J., Dannemiller, Steve, Davenport, Stephan A., Dawson, Gregory S., Meyst, K.J.L. de, Dell, Scott, Demirkan, Sebahattin, Denison, Christine A., Desai, Hrishikesh, DeSimone, Steven, Diehl, Leah M., Dimes, Ruth, Dong, Bei, Donnelly, Amy, du Pon, Adam, Duan, Huijue Kelly, Duffey, Ada, Dunn, Ryan T., Durkin, Mary P., Dzuranin, Ann C., Eberle, Rachel M., Ege, Matthew S., El Mahdy, Dina, Esplin, Adam, Eulerich, Marc, Everaert, Patricia, Farah, Nusrat, Farish, Lauren, Favere-Marchesi, Michael, Fayard, Dutch, Filosa, Jessica R., Ford, Melinda, Franz, Diana R., Fulmer, Bachman P., Fulmer, Sarah, Furner, Zhan Z., Gantman, Sonia, Garner, Steve, Garrett, Jace, Geng, Xin, Golden, Joanna, Goldman, William, Gomez, Josue, Gooley, Mark, Granitto, Shawn P., Green, Karen Y., Greenman, Cindy L., Gupta, Gaurav, Guymon, Ronald N., Hale, Kevin, Harper, Christopher J., Hartt, S. Allen, Hawk, Holly, Hawkins, Steven R., Hawkins, Erin M., Hay, David C., Heinzelmann, Rafael, Henderson, Cassy D., Hendricks, Bradley E., Heninger, William G., Hill, Mary S., Holden, Nicole, Holderness, D. Kip, Jr., Holt, Travis P., Hoopes, Jeffrey L., Hsieh, Sheng-Feng, Huang, Feiqi, Huang, Hua-Wei, Huang, Ting-Chiao, Huels, Brian W., Hunter, Kara, Hurley, Patrick J., Inger, Kerry, Islam, Sharif, Ison, Isaac, Issa, Hussein, Jackson, Andrew B., Jackson, Scott C., Janvrin, Diane J., Jimenez, Peggy D., Johanson, Daniel, Judd, J. Scott, Kawada, Brett S., Kelton, Andrea Seaton, Kern, Sara, Kerr, Jon N., Keune, Marsha B., Kim, Mindy (Hyo Jung), Knox, Brian D., Kogan, Gregory, Kotb, Amr, Krane, Ronja, Kremin, Joleen, Krieg, Kimberly S., Kugel, Jonathan, Kulset, Ellen M., Kuruppu, Chamara, LaDuca, Garrison, Lamberton, Barbara A., Lamboy-Ruiz, Melvin A., Lang, Bradley, Larocque, Stephannie A., Larson, Melissa P., Lawson, Bradley P., Lawson, James G., Lee, Lorraine, Lenk, Margarita M., Li-Kuehne, Michelle, Liljegren, Jonathan, Lin, Yi-Hung, Liu, Wu-Po, Liu, Zishang, Lock, Brandon, Long, James H., Loraas, Tina, Lowensohn, Suzanne, Loy, Thomas R., Lyngstadaas, Hakim, Maas, Wim, MacGregor, Jason E., Madsen, Dag Øivind, Malone, Carissa L., Margolin, Maximilian, Marshall, Mary E., Martin, Rachel M., Mpofu, Colleen McClain, McCoy, Chris, McGuigan, Nicholas C., McSwain, Dwayne N., Meckfessel, Michele D., Mellon, Mark J., Melton, Olivia S., Mercado, Julie M., Mitsuda, Steven, Modugu, Kennedy, Moehrle, Stephen, Chaghervand, Amirali Moeini, Moffitt, Kevin, Moon, Joon Seok, Muehlmann, Brigitte, Murray, Johnna, Mwaungulu, Emmanuel S., Myers, Noah, Naegle, J. Conrad, Jr., Ndicu, Martin J., Nelson, Aaron S., Nguyen, Anh L., Niederkofler, N.T., Nikbakht, Ehsan, O'Brien, Ann D., Ogunade, Kehinde M., O'Leary, Daniel, Oler, Mitchell J., Oler, Derek K., Olsen, Kari Joseph, Otalor, John I., Outlaw, Kyle W., Ozlanski, Michael. E., Parlier, Jenny, Paterson, Jeffrey S., Pearson, Christopher A., Petersen, Michael J., Petra, Steven T., Pickard, Matthew D., Pickerd, Jeffrey, Pinsker, Robert, Plante, Catherine, Plečnik, James M., Price, Richard A., III, Quick, Linda A., Raedy, Jana, Raschke, Robyn, Ravenscraft, Julie, Richardson, Vernon, Rixom, Brett A., Robertson, John F., Rock, Iyad, Romney, Miles A., Rozario, Andrea, Ruff, Michael F., Rupley, Kathleen, Saeedi, Ali, Saiewitz, Aaron, Salzsieder, Leigh W., Sarkar, Sayan, Saulls, Michael, Scanlan, Tialei A., Schaefer, Tammie J., Schaupp, Daniel, Schneider, Gary P., Seebeck, Andreas, Sellers, R. Drew, Seto, Samantha C., Sevel, Romi-Lee, Shan, Yuxin, Sherwood, Matthew G., Singorahardjo, Maggie, Skaftadottir, Hanna Kristin, Skomra, Justyna, Smith, Jason L., Smith, Dallin O., Smith, James, Snow, Mason C., Sommerfeldt, Ryan D., Sorensen, Kate B., Sorensen, Trevor L., Spieler, Andrew C., Stallings, Matthew A., Stallings, Lesya, Stancill, Alan, Stanley, Jonathan D., Stefaniak, Chad M., Stephens, Nathaniel M., Stewart, Bryan W., Stratopoulos, Theophanis C., Street, Daniel A., Subedi, Meena, Summers, Scott L., Sundkvist, Charlotte H., Synn, Christina, Tadesse, Amanuel, Tapis, Gregory P., Tassin, Kerri, Taylor, Samantha, Teal, Mary, Teeter, Ryan, Tharapos, Meredith, Theis, Jochen C., Thomas, Jack, Thompson, Kristen S., Thornock, Todd A., Tietz, Wendy, Travalent, Anthony M., Trinkle, Brad S., Truelson, J. Mike, Turner, Michael C., Vagner, Brandon, Vakilzadeh, Hamid, van der Geest, Jesse, van Pelt, Victor, Vandervelde, Scott D., Vega, Jose, Vera-Muñoz, Sandra, Villanueva, Brigham, Vincent, Nishani Edirisinghe, Wagener, Martin, Walton, Stephanie, Warne, Rick C., Watanabe, Olena V., Watson, David, Watson, Marcia Weidenmier, Weber, Jill, Weirich, Thomas, West, Ashley N., Wilford, Amanda L., Wilson, Aaron B., Winrow, Brian, Winrow, Timothy, Winrow, Tasia S., Wiseman, Denise, Witte, Annie L., Wood, Bryan D., Wood, Jessica, Woolley, Darryl, Wright, Nicole S., Wu, Juan, Xiong, Xiaomei (Grazia), Yatsenko, Dimitri, Yazzie, Courtney E., Young, Glen M., Zhang, Chanyuan (Abigail), Zimmerman, Aleksandra B., and Zoet, Emily
- Abstract
18 april 2023, Item does not contain fulltext
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- 2023
48. Associations of DHEA(S) with negative and positive affect in people who smoke daily with elevated and low depression symptoms: A pilot laboratory study
- Author
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Pang, Raina D, Pang, Raina D, Tucker, Chyna J, Guillot, Casey R, Belcher, Britni, Kirkpatrick, Matthew G, Pang, Raina D, Pang, Raina D, Tucker, Chyna J, Guillot, Casey R, Belcher, Britni, and Kirkpatrick, Matthew G
- Abstract
BackgroundIndividuals with depression symptoms have a harder time quitting smoking. High negative affect and low positive affect are core depression symptoms and arise following cigarette abstinence. Investigating associations of biological markers with negative and positive affect may provide valuable information about factors relevant to smoking cessation in individuals with elevated depression symptoms.MethodsDepression symptoms were measured at a baseline session. Participants then completed two counterbalanced experimental sessions (non-abstinent, abstinent) and completed measures of positive and negative affect, and provided saliva samples. Saliva samples were assayed at the Salimetrics' SalivaLab (Carlsbad, CA) using the Salimetrics Salivary Dehydroepiandrosterone (DHEA) Assay Kit (Cat. No. 1-1202) and Dehydroepiandrosterone-sulfate (DHEA-S) Assay Kit (Cat. No. 1-1252).ResultsThere were no main or interactive associations of DHEA with negative affect. However, there were significant DHEAS × experimental session and DHEAS × experimental session × depression symptom level interactions with negative affect. In the high depression symptom group, DHEAS positively associated with negative affect during the non-abstinent experimental session, but DHEAS negatively associated with negative affect during the abstinent experimental session. There were no associations of DHEA or DHEAS with positive affect.ConclusionThis study found that DHEAS negatively associated with negative affect during cigarette abstinence in individuals with elevated depression symptoms. This is important as high negative affect during cigarette abstinence may result in a return to smoking.
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- 2023
49. Slow TCA flux and ATP production in primary solid tumours but not metastases.
- Author
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Bartman, Caroline R, Bartman, Caroline R, Weilandt, Daniel R, Shen, Yihui, Lee, Won Dong, Han, Yujiao, TeSlaa, Tara, Jankowski, Connor SR, Samarah, Laith, Park, Noel R, da Silva-Diz, Victoria, Aleksandrova, Maya, Gultekin, Yetis, Marishta, Argit, Wang, Lin, Yang, Lifeng, Roichman, Asael, Bhatt, Vrushank, Lan, Taijin, Hu, Zhixian, Xing, Xi, Lu, Wenyun, Davidson, Shawn, Wühr, Martin, Vander Heiden, Matthew G, Herranz, Daniel, Guo, Jessie Yanxiang, Kang, Yibin, Rabinowitz, Joshua D, Bartman, Caroline R, Bartman, Caroline R, Weilandt, Daniel R, Shen, Yihui, Lee, Won Dong, Han, Yujiao, TeSlaa, Tara, Jankowski, Connor SR, Samarah, Laith, Park, Noel R, da Silva-Diz, Victoria, Aleksandrova, Maya, Gultekin, Yetis, Marishta, Argit, Wang, Lin, Yang, Lifeng, Roichman, Asael, Bhatt, Vrushank, Lan, Taijin, Hu, Zhixian, Xing, Xi, Lu, Wenyun, Davidson, Shawn, Wühr, Martin, Vander Heiden, Matthew G, Herranz, Daniel, Guo, Jessie Yanxiang, Kang, Yibin, and Rabinowitz, Joshua D
- Abstract
Tissues derive ATP from two pathways-glycolysis and the tricarboxylic acid (TCA) cycle coupled to the electron transport chain. Most energy in mammals is produced via TCA metabolism1. In tumours, however, the absolute rates of these pathways remain unclear. Here we optimize tracer infusion approaches to measure the rates of glycolysis and the TCA cycle in healthy mouse tissues, Kras-mutant solid tumours, metastases and leukaemia. Then, given the rates of these two pathways, we calculate total ATP synthesis rates. We find that TCA cycle flux is suppressed in all five primary solid tumour models examined and is increased in lung metastases of breast cancer relative to primary orthotopic tumours. As expected, glycolysis flux is increased in tumours compared with healthy tissues (the Warburg effect2,3), but this increase is insufficient to compensate for low TCA flux in terms of ATP production. Thus, instead of being hypermetabolic, as commonly assumed, solid tumours generally produce ATP at a slower than normal rate. In mouse pancreatic cancer, this is accommodated by the downregulation of protein synthesis, one of this tissue's major energy costs. We propose that, as solid tumours develop, cancer cells shed energetically expensive tissue-specific functions, enabling uncontrolled growth despite a limited ability to produce ATP.
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- 2023
50. Association of Autologous Tumor Lysate-Loaded Dendritic Cell Vaccination With Extension of Survival Among Patients With Newly Diagnosed and Recurrent Glioblastoma: A Phase 3 Prospective Externally Controlled Cohort Trial.
- Author
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Liau, Linda M, Liau, Linda M, Ashkan, Keyoumars, Brem, Steven, Campian, Jian L, Trusheim, John E, Iwamoto, Fabio M, Tran, David D, Ansstas, George, Cobbs, Charles S, Heth, Jason A, Salacz, Michael E, D'Andre, Stacy, Aiken, Robert D, Moshel, Yaron A, Nam, Joo Y, Pillainayagam, Clement P, Wagner, Stephanie A, Walter, Kevin A, Chaudhary, Rekha, Goldlust, Samuel A, Lee, Ian Y, Bota, Daniela A, Elinzano, Heinrich, Grewal, Jai, Lillehei, Kevin, Mikkelsen, Tom, Walbert, Tobias, Abram, Steven, Brenner, Andrew J, Ewend, Matthew G, Khagi, Simon, Lovick, Darren S, Portnow, Jana, Kim, Lyndon, Loudon, William G, Martinez, Nina L, Thompson, Reid C, Avigan, David E, Fink, Karen L, Geoffroy, Francois J, Giglio, Pierre, Gligich, Oleg, Krex, Dietmar, Lindhorst, Scott M, Lutzky, Jose, Meisel, Hans-Jörg, Nadji-Ohl, Minou, Sanchin, Lhagva, Sloan, Andrew, Taylor, Lynne P, Wu, Julian K, Dunbar, Erin M, Etame, Arnold B, Kesari, Santosh, Mathieu, David, Piccioni, David E, Baskin, David S, Lacroix, Michel, May, Sven-Axel, New, Pamela Z, Pluard, Timothy J, Toms, Steven A, Tse, Victor, Peak, Scott, Villano, John L, Battiste, James D, Mulholland, Paul J, Pearlman, Michael L, Petrecca, Kevin, Schulder, Michael, Prins, Robert M, Boynton, Alton L, Bosch, Marnix L, Liau, Linda M, Liau, Linda M, Ashkan, Keyoumars, Brem, Steven, Campian, Jian L, Trusheim, John E, Iwamoto, Fabio M, Tran, David D, Ansstas, George, Cobbs, Charles S, Heth, Jason A, Salacz, Michael E, D'Andre, Stacy, Aiken, Robert D, Moshel, Yaron A, Nam, Joo Y, Pillainayagam, Clement P, Wagner, Stephanie A, Walter, Kevin A, Chaudhary, Rekha, Goldlust, Samuel A, Lee, Ian Y, Bota, Daniela A, Elinzano, Heinrich, Grewal, Jai, Lillehei, Kevin, Mikkelsen, Tom, Walbert, Tobias, Abram, Steven, Brenner, Andrew J, Ewend, Matthew G, Khagi, Simon, Lovick, Darren S, Portnow, Jana, Kim, Lyndon, Loudon, William G, Martinez, Nina L, Thompson, Reid C, Avigan, David E, Fink, Karen L, Geoffroy, Francois J, Giglio, Pierre, Gligich, Oleg, Krex, Dietmar, Lindhorst, Scott M, Lutzky, Jose, Meisel, Hans-Jörg, Nadji-Ohl, Minou, Sanchin, Lhagva, Sloan, Andrew, Taylor, Lynne P, Wu, Julian K, Dunbar, Erin M, Etame, Arnold B, Kesari, Santosh, Mathieu, David, Piccioni, David E, Baskin, David S, Lacroix, Michel, May, Sven-Axel, New, Pamela Z, Pluard, Timothy J, Toms, Steven A, Tse, Victor, Peak, Scott, Villano, John L, Battiste, James D, Mulholland, Paul J, Pearlman, Michael L, Petrecca, Kevin, Schulder, Michael, Prins, Robert M, Boynton, Alton L, and Bosch, Marnix L
- Abstract
ImportanceGlioblastoma is the most lethal primary brain cancer. Clinical outcomes for glioblastoma remain poor, and new treatments are needed.ObjectiveTo investigate whether adding autologous tumor lysate-loaded dendritic cell vaccine (DCVax-L) to standard of care (SOC) extends survival among patients with glioblastoma.Design, setting, and participantsThis phase 3, prospective, externally controlled nonrandomized trial compared overall survival (OS) in patients with newly diagnosed glioblastoma (nGBM) and recurrent glioblastoma (rGBM) treated with DCVax-L plus SOC vs contemporaneous matched external control patients treated with SOC. This international, multicenter trial was conducted at 94 sites in 4 countries from August 2007 to November 2015. Data analysis was conducted from October 2020 to September 2021.InterventionsThe active treatment was DCVax-L plus SOC temozolomide. The nGBM external control patients received SOC temozolomide and placebo; the rGBM external controls received approved rGBM therapies.Main outcomes and measuresThe primary and secondary end points compared overall survival (OS) in nGBM and rGBM, respectively, with contemporaneous matched external control populations from the control groups of other formal randomized clinical trials.ResultsA total of 331 patients were enrolled in the trial, with 232 randomized to the DCVax-L group and 99 to the placebo group. Median OS (mOS) for the 232 patients with nGBM receiving DCVax-L was 19.3 (95% CI, 17.5-21.3) months from randomization (22.4 months from surgery) vs 16.5 (95% CI, 16.0-17.5) months from randomization in control patients (HR = 0.80; 98% CI, 0.00-0.94; P = .002). Survival at 48 months from randomization was 15.7% vs 9.9%, and at 60 months, it was 13.0% vs 5.7%. For 64 patients with rGBM receiving DCVax-L, mOS was 13.2 (95% CI, 9.7-16.8) months from relapse vs 7.8 (95% CI, 7.2-8.2) months among control patients (HR, 0.58; 98% CI, 0.00-0.76; P < .001). Survival at 24 and 30 months after rec
- Published
- 2023
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