1. iBRAIN2: Automated analysis and data handling for RNAi screens
- Author
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Gesing, Sandra, Glatard, Tristan, Olabarriaga, Silvia Delgado, Solomonides, Tony, Silverstein, Jonathan C, Montagnat, Johan, Gaignard, Alban, Krefting, Dagmar, Gesing, S ( Sandra ), Glatard, T ( Tristan ), Olabarriaga, S D ( Silvia Delgado ), Solomonides, T ( Tony ), Silverstein, J C ( Jonathan C ), Montagnat, J ( Johan ), Gaignard, A ( Alban ), Krefting, D ( Dagmar ), Rouilly, Vincent, Pujadas, Eva, Hullár, Béla, Balázs, Csabas, Kunszt, Peter, Podvinec, Michael, Gesing, Sandra, Glatard, Tristan, Olabarriaga, Silvia Delgado, Solomonides, Tony, Silverstein, Jonathan C, Montagnat, Johan, Gaignard, Alban, Krefting, Dagmar, Gesing, S ( Sandra ), Glatard, T ( Tristan ), Olabarriaga, S D ( Silvia Delgado ), Solomonides, T ( Tony ), Silverstein, J C ( Jonathan C ), Montagnat, J ( Johan ), Gaignard, A ( Alban ), Krefting, D ( Dagmar ), Rouilly, Vincent, Pujadas, Eva, Hullár, Béla, Balázs, Csabas, Kunszt, Peter, and Podvinec, Michael
- Abstract
We report on the implementation of a software suite dedicated to the management and analysis of large scale RNAi High Content Screening (HCS). We describe the requirements identified amongst our different users, the supported data flow, and the implemented software. Our system is already supporting productively three different laboratories operating in distinct IT infrastructures. The system was already used to analyze hundreds of RNAi HCS plates.
- Published
- 2012