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Angiosperms are the cornerstone of most terrestrial ecosystems and human livelihoods(1,2). A robust understanding of angiosperm evolution is required to explain their rise to ecological dominance. So far, the angiosperm tree of life has been determined primarily by means of analyses of the plastid genome(3,4). Many studies have drawn on this foundational work, such as classification and first insights into angiosperm diversification since their Mesozoic origins(5-7). However, the limited and biased sampling of both taxa and genomes undermines confidence in the tree and its implications. Here, we build the tree of life for almost 8,000 (about 60%) angiosperm genera using a standardized set of 353 nuclear genes(8). This 15-fold increase in genus-level sampling relative to comparable nuclear studies(9) provides a critical test of earlier results and brings notable change to key groups, especially in rosids, while substantiating many previously predicted relationships. Scaling this tree to time using 200 fossils, we discovered that early angiosperm evolution was characterized by high gene tree conflict and explosive diversification, giving rise to more than 80% of extant angiosperm orders. Steady diversification ensued through the remaining Mesozoic Era until rates resurged in the Cenozoic Era, concurrent with decreasing global temperatures and tightly linked with gene tree conflict. Taken together, our extensive sampling combined with advanced phylogenomic methods shows the deep history and full complexity in the evolution of a megadiverse clade.

Environmental change is intensifying the biodiversity crisis and threatening species across the tree of life. Conservation genomics can help inform conservation actions and slow biodiversity loss. However, more training, appropriate use of novel genomic methods and communication with managers are needed. Here, we review practical guidance to improve applied conservation genomics. We share insights aimed at ensuring effectiveness of conservation actions around three themes: (1) improving pedagogy and training in conservation genomics including for online global audiences, (2) conducting rigorous population genomic analyses properly considering theory, marker types and data interpretation and (3) facilitating communication and collaboration between managers and researchers. We aim to update students and professionals and expand their conservation toolkit with genomic principles and recent approaches for conserving and managing biodiversity. The biodiversity crisis is a global problem and, as such, requires international involvement, training, collaboration and frequent reviews of the literature and workshops as we do here.

Understanding the timescales that shape spatial genetic structure is pivotal to ascertain the impact of habitat fragmentation on the genetic diversity and reproductive viability of long-lived plant populations. Combining genetic and ecological information with current and past fragmentation conditions allows the identification of the main drivers important in shaping population structure and declines in reproduction, which is crucial for informing conservation strategies. Using historic aerial photographs, we defined the past fragmentation conditions for the shrub Conospermum undulatum, a species now completely embedded in an urban area. We explored the impact of current and past conditions on its genetic layout and assessed the effects of genetic and environmental factors on its reproduction. The historically high structural connectivity was evident in the genetics of the species. Despite the current intense fragmentation, we found similar levels of genetic diversity across populations and a weak spatial genetic structure. Historical connectivity was negatively associated with genetic differentiation among populations and positively related to within-population genetic diversity. Variation partitioning of reproductive performance explained ~ 66% of the variance, showing significant influences for genetic (9%), environmental (15%), and combined (42%) fractions. Our study highlights the importance of considering the historical habitat dynamics when investigating fragmentation consequences in long-lived plants. A detailed characterization of fragmentation from 1953 has shown how low levels of genetic fixation are due to extensive gene flow through the non-fragmented landscape. Moreover, knowledge of the relationships between genetic and environmental variation and reproduction can help to implement effective conservation strategies, particularly in highly dynamic landscapes.

Understanding the timescales that shape spatial genetic structure is pivotal to ascertain the impact of habitat fragmentation on the genetic diversity and reproductive viability of long-lived plant populations. Combining genetic and ecological information with current and past fragmentation conditions allows the identification of the main drivers important in shaping population structure and declines in reproduction, which is crucial for informing conservation strategies. Using historic aerial photographs, we defined the past fragmentation conditions for the shrub Conospermum undulatum, a species now completely embedded in an urban area. We explored the impact of current and past conditions on its genetic layout and assessed the effects of genetic and environmental factors on its reproduction. The historically high structural connectivity was evident in the genetics of the species. Despite the current intense fragmentation, we found similar levels of genetic diversity across populations and a weak spatial genetic structure. Historical connectivity was negatively associated with genetic differentiation among populations and positively related to within-population genetic diversity. Variation partitioning of reproductive performance explained ~ 66% of the variance, showing significant influences for genetic (9%), environmental (15%), and combined (42%) fractions. Our study highlights the importance of considering the historical habitat dynamics when investigating fragmentation consequences in long-lived plants. A detailed characterization of fragmentation from 1953 has shown how low levels of genetic fixation are due to extensive gene flow through the non-fragmented landscape. Moreover, knowledge of the relationships between genetic and environmental variation and reproduction can help to implement effective conservation strategies, particularly in highly dynamic landscapes.

Understanding the timescales that shape spatial genetic structure is pivotal to ascertain the impact of habitat fragmentation on the genetic diversity and reproductive viability of long-lived plant populations. Combining genetic and ecological information with current and past fragmentation conditions allows the identification of the main drivers important in shaping population structure and declines in reproduction, which is crucial for informing conservation strategies. Using historic aerial photographs, we defined the past fragmentation conditions for the shrub Conospermum undulatum, a species now completely embedded in an urban area. We explored the impact of current and past conditions on its genetic layout and assessed the effects of genetic and environmental factors on its reproduction. The historically high structural connectivity was evident in the genetics of the species. Despite the current intense fragmentation, we found similar levels of genetic diversity across populations and a weak spatial genetic structure. Historical connectivity was negatively associated with genetic differentiation among populations and positively related to within-population genetic diversity. Variation partitioning of reproductive performance explained ~ 66% of the variance, showing significant influences for genetic (9%), environmental (15%), and combined (42%) fractions. Our study highlights the importance of considering the historical habitat dynamics when investigating fragmentation consequences in long-lived plants. A detailed characterization of fragmentation from 1953 has shown how low levels of genetic fixation are due to extensive gene flow through the non-fragmented landscape. Moreover, knowledge of the relationships between genetic and environmental variation and reproduction can help to implement effective conservation strategies, particularly in highly dynamic landscapes.

Understanding the timescales that shape spatial genetic structure is pivotal to ascertain the impact of habitat fragmentation on the genetic diversity and reproductive viability of long-lived plant populations. Combining genetic and ecological information with current and past fragmentation conditions allows the identification of the main drivers important in shaping population structure and declines in reproduction, which is crucial for informing conservation strategies. Using historic aerial photographs, we defined the past fragmentation conditions for the shrub Conospermum undulatum, a species now completely embedded in an urban area. We explored the impact of current and past conditions on its genetic layout and assessed the effects of genetic and environmental factors on its reproduction. The historically high structural connectivity was evident in the genetics of the species. Despite the current intense fragmentation, we found similar levels of genetic diversity across populations and a weak spatial genetic structure. Historical connectivity was negatively associated with genetic differentiation among populations and positively related to within-population genetic diversity. Variation partitioning of reproductive performance explained ~ 66% of the variance, showing significant influences for genetic (9%), environmental (15%), and combined (42%) fractions. Our study highlights the importance of considering the historical habitat dynamics when investigating fragmentation consequences in long-lived plants. A detailed characterization of fragmentation from 1953 has shown how low levels of genetic fixation are due to extensive gene flow through the non-fragmented landscape. Moreover, knowledge of the relationships between genetic and environmental variation and reproduction can help to implement effective conservation strategies, particularly in highly dynamic landscapes.

Climate models predict that temperature means will continuously increase globally, and that heatwaves and drought periods will become more frequent and intense, particularly in Mediterranean-type climates. The Southwest Western Australia (SWWA) Biodiversity Hotspot has extensive forest environments that have been subject to heatwaves and drought-induced forest mortality in recent years, impacting forest carbon sequestration and local ecological structure. Although, species may persist through enhanced physiological tolerance, phenotypic plasticity and/or genetic adaptation. Genetic variation is critical for ecological adaptive capacity - the potential and ability to adjust to, and persist through, external factors - and consequently, the evolutionary potential of the species. Evolution to a specific environment through natural selection results in patterns of local adaptation (when a local population experiences higher fitness compared to non-local counterparts). Local adaptation can be identified by either genome wide surveys that link genetic variants to climate variables or measuring plant traits indicative of plant performance and survival through reciprocal transplants in common environments. Exploring genetic adaptation patterns associated with physiological tolerance to climate can guide forest management approaches to enhance forests’ resilience to climate change, such as assisted gene migration. The genetic survey (Chapter 2) sampled natural jarrah populations and obtained 13,534 independent single nucleotide polymorphic (SNP) markers across the genome. Three genotype-association analyses were used to identify putatively adapted SNPs associated with independent climate variables. While overall levels of population differentiation were low (FST=0.04), environmental association analyses found a total of 2,336 unique SNPs associated with temperature and precipitation variables, with 1,440 SNPs annotated to genic regions. Considerable allelic turnover was ident

Climate models predict that temperature means will continuously increase globally, and that heatwaves and drought periods will become more frequent and intense, particularly in Mediterranean-type climates. The Southwest Western Australia (SWWA) Biodiversity Hotspot has extensive forest environments that have been subject to heatwaves and drought-induced forest mortality in recent years, impacting forest carbon sequestration and local ecological structure. Although, species may persist through enhanced physiological tolerance, phenotypic plasticity and/or genetic adaptation. Genetic variation is critical for ecological adaptive capacity - the potential and ability to adjust to, and persist through, external factors - and consequently, the evolutionary potential of the species. Evolution to a specific environment through natural selection results in patterns of local adaptation (when a local population experiences higher fitness compared to non-local counterparts). Local adaptation can be identified by either genome wide surveys that link genetic variants to climate variables or measuring plant traits indicative of plant performance and survival through reciprocal transplants in common environments. Exploring genetic adaptation patterns associated with physiological tolerance to climate can guide forest management approaches to enhance forests’ resilience to climate change, such as assisted gene migration. The genetic survey (Chapter 2) sampled natural jarrah populations and obtained 13,534 independent single nucleotide polymorphic (SNP) markers across the genome. Three genotype-association analyses were used to identify putatively adapted SNPs associated with independent climate variables. While overall levels of population differentiation were low (FST=0.04), environmental association analyses found a total of 2,336 unique SNPs associated with temperature and precipitation variables, with 1,440 SNPs annotated to genic regions. Considerable allelic turnover was ident

Understanding the timescales that shape spatial genetic structure is pivotal to ascertain the impact of habitat fragmentation on the genetic diversity and reproductive viability of long-lived plant populations. Combining genetic and ecological information with current and past fragmentation conditions allows the identification of the main drivers important in shaping population structure and declines in reproduction, which is crucial for informing conservation strategies. Using historic aerial photographs, we defined the past fragmentation conditions for the shrub Conospermum undulatum, a species now completely embedded in an urban area. We explored the impact of current and past conditions on its genetic layout and assessed the effects of genetic and environmental factors on its reproduction. The historically high structural connectivity was evident in the genetics of the species. Despite the current intense fragmentation, we found similar levels of genetic diversity across populations and a weak spatial genetic structure. Historical connectivity was negatively associated with genetic differentiation among populations and positively related to within-population genetic diversity. Variation partitioning of reproductive performance explained ~ 66% of the variance, showing significant influences for genetic (9%), environmental (15%), and combined (42%) fractions. Our study highlights the importance of considering the historical habitat dynamics when investigating fragmentation consequences in long-lived plants. A detailed characterization of fragmentation from 1953 has shown how low levels of genetic fixation are due to extensive gene flow through the non-fragmented landscape. Moreover, knowledge of the relationships between genetic and environmental variation and reproduction can help to implement effective conservation strategies, particularly in highly dynamic landscapes.

Understanding the timescales that shape spatial genetic structure is pivotal to ascertain the impact of habitat fragmentation on the genetic diversity and reproductive viability of long-lived plant populations. Combining genetic and ecological information with current and past fragmentation conditions allows the identification of the main drivers important in shaping population structure and declines in reproduction, which is crucial for informing conservation strategies. Using historic aerial photographs, we defined the past fragmentation conditions for the shrub Conospermum undulatum, a species now completely embedded in an urban area. We explored the impact of current and past conditions on its genetic layout and assessed the effects of genetic and environmental factors on its reproduction. The historically high structural connectivity was evident in the genetics of the species. Despite the current intense fragmentation, we found similar levels of genetic diversity across populations and a weak spatial genetic structure. Historical connectivity was negatively associated with genetic differentiation among populations and positively related to within-population genetic diversity. Variation partitioning of reproductive performance explained ~ 66% of the variance, showing significant influences for genetic (9%), environmental (15%), and combined (42%) fractions. Our study highlights the importance of considering the historical habitat dynamics when investigating fragmentation consequences in long-lived plants. A detailed characterization of fragmentation from 1953 has shown how low levels of genetic fixation are due to extensive gene flow through the non-fragmented landscape. Moreover, knowledge of the relationships between genetic and environmental variation and reproduction can help to implement effective conservation strategies, particularly in highly dynamic landscapes.

Understanding the timescales that shape spatial genetic structure is pivotal to ascertain the impact of habitat fragmentation on the genetic diversity and reproductive viability of long-lived plant populations. Combining genetic and ecological information with current and past fragmentation conditions allows the identification of the main drivers important in shaping population structure and declines in reproduction, which is crucial for informing conservation strategies. Using historic aerial photographs, we defined the past fragmentation conditions for the shrub Conospermum undulatum, a species now completely embedded in an urban area. We explored the impact of current and past conditions on its genetic layout and assessed the effects of genetic and environmental factors on its reproduction. The historically high structural connectivity was evident in the genetics of the species. Despite the current intense fragmentation, we found similar levels of genetic diversity across populations and a weak spatial genetic structure. Historical connectivity was negatively associated with genetic differentiation among populations and positively related to within-population genetic diversity. Variation partitioning of reproductive performance explained ~ 66% of the variance, showing significant influences for genetic (9%), environmental (15%), and combined (42%) fractions. Our study highlights the importance of considering the historical habitat dynamics when investigating fragmentation consequences in long-lived plants. A detailed characterization of fragmentation from 1953 has shown how low levels of genetic fixation are due to extensive gene flow through the non-fragmented landscape. Moreover, knowledge of the relationships between genetic and environmental variation and reproduction can help to implement effective conservation strategies, particularly in highly dynamic landscapes.

Parasitism is a pervasive phenomenon in nature with the relationship between species driving evolution in both parasite and host. Due to their host-dependent lifestyle, parasites may adapt to the abiotic environment in ways that differ from their hosts or from free-living relatives; yet rarely has this been assessed. Here, we test two competing hypotheses related to whether putatively adaptive genetic variation in a specialist mistletoe associates with the same, or different, climatic variables as its host species. We sampled 11 populations of the specialist mistletoe Amyema gibberula var. tatei (n = 154) and 10 populations of its associated host Hakea recurva subsp. recurva (n = 160). Reduced-representation sequencing was used to obtain genome-wide markers and putatively adaptive variation detected using genome scan methods. Climate associations were identified using generalized dissimilarity modelling, and these were mapped geographically to visualize the spatial patterns of genetic composition. Our results supported the hypothesis of parasites and host species responding differently to climatic variables. Temperature was relatively more important in predicting allelic turnover in the specialist mistletoe while precipitation was more important for the host. This suggests that parasitic plants and host species may respond differently to selective pressures, potentially as a result of differing nutrient acquisition strategies. Specifically, mistletoes acquire water from hosts (rather than the abiotic environment), which may provide a buffer to precipitation as a selective pressure. This work deepens and complements the physiological and other ecological studies of adaptation and provides a window into the evolutionary processes that underlie previously observed phenomena. Applying these methods to a comparative study in a host–parasite system has also highlighted factors that affect the study of selection pressure on nonmodel organisms, such as differing adaptation

Background and aims Ant-plant associations are widely diverse and distributed throughout the world, leading to antagonistic and/or mutualistic interactions. Ant pollination is a rare mutualistic association and reports of ants as effective pollinators are limited to a few studies. Conospermum (Proteaceae) is an insect-pollinated genus well represented in the south-western Australia biodiversity hotspot, and here we aimed to evaluate the role of ants as pollinators of C. undulatum. Methods Pollen germination after contact with several species of ants and bees was tested for C. undulatum and five co-flowering species for comparison. We then sampled the pollen load of floral visitors of C. undulatum to assess whether ants carried a pollen load sufficient to enable pollination. Lastly, we performed exclusion treatments to assess the relative effect of flying- and non-flying-invertebrate floral visitors on the reproduction of C. undulatum. For this, we measured the seed set under different conditions: ants exclusion, flying-insects exclusion and control. Key results Pollen of C. undulatum, along with the other Conospermum species, had a germination rate after contact with ants of ~80% which did not differ from the effect of bees; in contrast, the other plant species tested showed a drop in the germination rate to ~10% following ant treatments. Although ants were generalist visitors, they carried a pollen load with 68% to 86% of suitable grains. Moreover, ants significantly contributed to the seed set of C. undulatum. Conclusions Our study highlights the complexity of ant-flower interactions and suggests that generalizations neglecting the importance of ants as pollinators cannot be made. Conospermum undulatum has evolved pollen with resistance to the negative effect of ant secretions on pollen grains, with ants providing effective pollination services to this threatened species.

The purpose of this extended Abstract is to provide a succinct introduction to the Oz Mammals Genomics (OMG) Consortium. A more comprehensive discussion of the rationale, development and approach of the OMG Consortium can be found in Deakin et al. (2019).

Background and aims Ant-plant associations are widely diverse and distributed throughout the world, leading to antagonistic and/or mutualistic interactions. Ant pollination is a rare mutualistic association and reports of ants as effective pollinators are limited to a few studies. Conospermum (Proteaceae) is an insect-pollinated genus well represented in the south-western Australia biodiversity hotspot, and here we aimed to evaluate the role of ants as pollinators of C. undulatum. Methods Pollen germination after contact with several species of ants and bees was tested for C. undulatum and five co-flowering species for comparison. We then sampled the pollen load of floral visitors of C. undulatum to assess whether ants carried a pollen load sufficient to enable pollination. Lastly, we performed exclusion treatments to assess the relative effect of flying- and non-flying-invertebrate floral visitors on the reproduction of C. undulatum. For this, we measured the seed set under different conditions: ants exclusion, flying-insects exclusion and control. Key results Pollen of C. undulatum, along with the other Conospermum species, had a germination rate after contact with ants of ~80% which did not differ from the effect of bees; in contrast, the other plant species tested showed a drop in the germination rate to ~10% following ant treatments. Although ants were generalist visitors, they carried a pollen load with 68% to 86% of suitable grains. Moreover, ants significantly contributed to the seed set of C. undulatum. Conclusions Our study highlights the complexity of ant-flower interactions and suggests that generalizations neglecting the importance of ants as pollinators cannot be made. Conospermum undulatum has evolved pollen with resistance to the negative effect of ant secretions on pollen grains, with ants providing effective pollination services to this threatened species.

Background and aims Ant-plant associations are widely diverse and distributed throughout the world, leading to antagonistic and/or mutualistic interactions. Ant pollination is a rare mutualistic association and reports of ants as effective pollinators are limited to a few studies. Conospermum (Proteaceae) is an insect-pollinated genus well represented in the south-western Australia biodiversity hotspot, and here we aimed to evaluate the role of ants as pollinators of C. undulatum. Methods Pollen germination after contact with several species of ants and bees was tested for C. undulatum and five co-flowering species for comparison. We then sampled the pollen load of floral visitors of C. undulatum to assess whether ants carried a pollen load sufficient to enable pollination. Lastly, we performed exclusion treatments to assess the relative effect of flying- and non-flying-invertebrate floral visitors on the reproduction of C. undulatum. For this, we measured the seed set under different conditions: ants exclusion, flying-insects exclusion and control. Key results Pollen of C. undulatum, along with the other Conospermum species, had a germination rate after contact with ants of ~80% which did not differ from the effect of bees; in contrast, the other plant species tested showed a drop in the germination rate to ~10% following ant treatments. Although ants were generalist visitors, they carried a pollen load with 68% to 86% of suitable grains. Moreover, ants significantly contributed to the seed set of C. undulatum. Conclusions Our study highlights the complexity of ant-flower interactions and suggests that generalizations neglecting the importance of ants as pollinators cannot be made. Conospermum undulatum has evolved pollen with resistance to the negative effect of ant secretions on pollen grains, with ants providing effective pollination services to this threatened species.

1. Fragmentation of natural vegetation is currently one of the largest threats to plant populations and their interactions with pollinators. Plant reproductive susceptibility to habitat fragmentation has been investigated in many species; however, the response of wild mass-flowering species is poorly known, with research limited to mainly boreal plant species. 2. Here we studied twelve remnant populations of the threatened mass-flowering shrub Conospermum undulatum in the southwest Australian biodiversity hotspot, each presenting different population size, level of isolation, and floral display. We assessed the impact of fragmentation on: 1) fruit and seed production; and 2) seed germination. To gain a deeper understanding of factors influencing the reproductive success of C. undulatum we performed pollinator exclusion and self-pollination treatments to experimentally assess the mating system of this threatened shrub. 3. We found C. undulatum to be strictly self-incompatible and totally reliant on pollinators visiting with an outcrossed pollen load to complete the reproductive cycle. Further, we found that fruit production significantly decreased with decreasing floral display. A decrease in population size and floral display led to a decrease in seed output, while increasing isolation also led to a reduced production of seeds. Overall, seed germination was positively related to population size, and a negative relationship was found between germination and isolation. 4. Our results demonstrate the important relationship between pollinators and floral morphology in plants of southwest Australia that have coevolved with native pollinators and developed characteristic flower morphologies over long timeframes. The self-incompatible C. undulatum cannot rely on its mass-flowering trait to attract pollinators from co-flowering species, neither can it compensate for the lack of visitors by promoting geitonogamy. Consequently, fragmentation has a significant effect on the re

Background and aims: Ant-plant associations are widely diverse and distributed throughout the world, leading to antagonistic and/or mutualistic interactions. Ant pollination is a rare mutualistic association and reports of ants as effective pollinators are limited to a few studies. Conospermum (Proteaceae) is an insect-pollinated genus well represented in the south-western Australia biodiversity hotspot, and here we aimed to evaluate the role of ants as pollinators of C. undulatum. Methods: Pollen germination after contact with several species of ants and bees was tested for C. undulatum and five co-flowering species for comparison. We then sampled the pollen load of floral visitors of C. undulatum to assess whether ants carried a pollen load sufficient to enable pollination. Lastly, we performed exclusion treatments to assess the relative effect of flying- and non-flying-invertebrate floral visitors on the reproduction of C. undulatum. For this, we measured the seed set under different conditions: ants exclusion, flying-insects exclusion and control. Key results: Pollen of C. undulatum, along with the other Conospermum species, had a germination rate after contact with ants of ~80% which did not differ from the effect of bees; in contrast, the other plant species tested showed a drop in the germination rate to ~10% following ant treatments. Although ants were generalist visitors, they carried a pollen load with 68% to 86% of suitable grains. Moreover, ants significantly contributed to the seed set of C. undulatum. Conclusions: Our study highlights the complexity of ant-flower interactions and suggests that generalizations neglecting the importance of ants as pollinators cannot be made. Conospermum undulatum has evolved pollen with resistance to the negative effect of ant secretions on pollen grains, with ants providing effective pollination services to this threatened species.

Background and aims: Ant-plant associations are widely diverse and distributed throughout the world, leading to antagonistic and/or mutualistic interactions. Ant pollination is a rare mutualistic association and reports of ants as effective pollinators are limited to a few studies. Conospermum (Proteaceae) is an insect-pollinated genus well represented in the south-western Australia biodiversity hotspot, and here we aimed to evaluate the role of ants as pollinators of C. undulatum. Methods: Pollen germination after contact with several species of ants and bees was tested for C. undulatum and five co-flowering species for comparison. We then sampled the pollen load of floral visitors of C. undulatum to assess whether ants carried a pollen load sufficient to enable pollination. Lastly, we performed exclusion treatments to assess the relative effect of flying- and non-flying-invertebrate floral visitors on the reproduction of C. undulatum. For this, we measured the seed set under different conditions: ants exclusion, flying-insects exclusion and control. Key results: Pollen of C. undulatum, along with the other Conospermum species, had a germination rate after contact with ants of ~80% which did not differ from the effect of bees; in contrast, the other plant species tested showed a drop in the germination rate to ~10% following ant treatments. Although ants were generalist visitors, they carried a pollen load with 68% to 86% of suitable grains. Moreover, ants significantly contributed to the seed set of C. undulatum. Conclusions: Our study highlights the complexity of ant-flower interactions and suggests that generalizations neglecting the importance of ants as pollinators cannot be made. Conospermum undulatum has evolved pollen with resistance to the negative effect of ant secretions on pollen grains, with ants providing effective pollination services to this threatened species.

1. Fragmentation of natural vegetation is currently one of the largest threats to plant populations and their interactions with pollinators. Plant reproductive susceptibility to habitat fragmentation has been investigated in many species; however, the response of wild mass-flowering species is poorly known, with research limited to mainly boreal plant species. 2. Here we studied twelve remnant populations of the threatened mass-flowering shrub Conospermum undulatum in the southwest Australian biodiversity hotspot, each presenting different population size, level of isolation, and floral display. We assessed the impact of fragmentation on: 1) fruit and seed production; and 2) seed germination. To gain a deeper understanding of factors influencing the reproductive success of C. undulatum we performed pollinator exclusion and self-pollination treatments to experimentally assess the mating system of this threatened shrub. 3. We found C. undulatum to be strictly self-incompatible and totally reliant on pollinators visiting with an outcrossed pollen load to complete the reproductive cycle. Further, we found that fruit production significantly decreased with decreasing floral display. A decrease in population size and floral display led to a decrease in seed output, while increasing isolation also led to a reduced production of seeds. Overall, seed germination was positively related to population size, and a negative relationship was found between germination and isolation. 4. Our results demonstrate the important relationship between pollinators and floral morphology in plants of southwest Australia that have coevolved with native pollinators and developed characteristic flower morphologies over long timeframes. The self-incompatible C. undulatum cannot rely on its mass-flowering trait to attract pollinators from co-flowering species, neither can it compensate for the lack of visitors by promoting geitonogamy. Consequently, fragmentation has a significant effect on the re

Fragmentation of natural vegetation is currently one of the largest threats to plant populations and their interactions with pollinators. Plant reproductive susceptibility to habitat fragmentation has been investigated in many species; however, the response of wild mass‐flowering species is poorly known, with research limited to mainly boreal plant species. Here, we studied twelve remnant populations of the threatened mass‐flowering shrub Conospermum undulatum in the southwest Australian biodiversity hotspot, each presenting different population size, level of isolation, and floral display. We assessed the impact of fragmentation on (a) fruit and seed production; and (b) seed germination. To gain a deeper understanding of factors influencing the reproductive success of C. undulatum, we performed pollinator exclusion and self‐pollination treatments to experimentally assess the mating system of this threatened shrub. We found C. undulatumto be strictly self‐incompatible and totally reliant on pollinators visiting with an outcrossed pollen load to complete the reproductive cycle. Further, we found that fruit production dropped from 35% to Synthesis and applications. Our results demonstrate the important relationship between pollinators and floral morphology in plants of southwest Australia that have coevolved with native pollinators and developed characteristic flower morphologies over long time frames. Indeed, due to its characteristic pollination mechanism, the self‐incompatible C. undulatum can only rely on specialized native pollinators for pollen flow and cannot rely on its mass‐flowering trait to attract generalist pollinators from coflowering species; neither can it compensate for the lack of visitors by promoting geitonogamy. Consequently, fragmentation has a significant effect on the reproductive output of C. undulatum, and size, isolation, and floral display of populations are important factors to be considered when planning conservation actions for the speci

PREMISE: Recent habitat fragmentation is posing a risk to the wavy‐leaved smokebush, Conospermum undulatum (Proteaceae), a rare plant species endemic to southwestern Western Australia. Microsatellite markers are required to characterize the genetic diversity and structure of the species for conservation purposes and to facilitate ecological studies. METHODS AND RESULTS: Illumina MiSeq high‐throughput sequencing was used to develop 20 novel microsatellite markers for C. undulatum. Polymorphism at each locus was assessed using 72 individuals from three natural populations. Nineteen markers were polymorphic, with the number of alleles per locus ranging from two to 21, and observed and expected heterozygosity ranging from 0.000 to 1.000 and 0.117 to 0.919, respectively. All markers successfully amplified in three congeneric species (C. stoechadis, C. canaliculatum and C. triplinervium). CONCLUSIONS: The microsatellite markers will be useful for revealing patterns of genetic diversity, dispersal dynamics, and hybridization events for C. undulatum to inform future conservation efforts.

Mangrove forests are among the world’s most important ecosystems but are declining rapidly worldwide. Effective conservation management requires a better understanding of the patterns and drivers of gene flow across a range of spatial scales. Despite the capacity for long distance propagule dispersal, field studies suggest that mangrove propagules tend not to disperse far from the release point, which has important implications for the impact of habitat discontinuities on gene flow. We use a comprehensive seascape genomics approach to investigate this concept in the world’s most widely distributed mangrove species, Avicennia marina. Location 21 sites along 2400 km of Western Australian coastline Methods We used 6,162 neutral SNP loci and a hierarchical sampling design to investigate patterns of gene flow and structuring among 21 populations of A. marina. We combined this data with GIS spatial analyses in a regression model to test the relative influence of habitat continuity and geographic distance on patterns of genetic differentiation. We found a complex pattern of gene flow; broadscale isolation-by-distance, disrupted by strong genetic discontinuities that coincided with gaps in mangrove distribution. These genetic discontinuities formed seven discrete subpopulations with negligible evidence for recent migration among them. The regression model combining marine geographic distance and habitat continuity as explanatory variables best fit the data, explaining 86% of the total genetic variation. Our results validate previous assertions that propagule dispersal in A. marina is spatially limited and demonstrate that significant gaps in mangrove distribution present strong barriers to stepping-stone gene flow in this species. This reiterates that dispersive life history features cannot be assumed to lead to widespread connectivity and demonstrates that effective management of these important ecosystem builders should prioritise restoring habitat continuity and minimisi

Premise of the study: Recent habitat fragmentation is posing a risk to the wavy-leaved smokebush, Conospermum undulatum, a rare plant species endemic to the south-western Western Australia. Microsatellites markers are required to characterize the genetic diversity and structure of the species for conservation purposes and to facilitate ecological studies. Methods and Results: Illumina MiSeq high-throughput sequencing was used to develop 20 novel microsatellite markers for C. undulatum. Polymorphism at each locus was assessed using 72 individuals from three natural populations. Nineteen markers were polymorphic, with the number of alleles per locus ranging from two to 21, and observed and expected heterozygosity ranging from 0.000 to 1.000 and 0.117 to 0.919, respectively. All markers successfully amplified in three congeneric species. Conclusions: The microsatellite markers will be useful for revealing patterns of genetic diversity, dispersal dynamics and hybridization events for C. undulatum to inform future conservation efforts.

The effects of anthropogenic climate change on biodiversity are well known for some high‐profile Australian marine systems, including coral bleaching and kelp forest devastation. Less well‐published are the impacts of climate change being observed in terrestrial ecosystems, although ecological models have predicted substantial changes are likely. Detecting and attributing terrestrial changes to anthropogenic factors is difficult due to the ecological importance of extreme conditions, the noisy nature of short‐term data collected with limited resources, and complexities introduced by biotic interactions. Here, we provide a suite of case studies that have considered possible impacts of anthropogenic climate change on Australian terrestrial systems. Our intention is to provide a diverse collection of stories illustrating how Australian flora and fauna are likely responding to direct and indirect effects of anthropogenic climate change. We aim to raise awareness rather than be comprehensive. We include case studies covering canopy dieback in forests, compositional shifts in vegetation, positive feedbacks between climate, vegetation and disturbance regimes, local extinctions in plants, size changes in birds, phenological shifts in reproduction and shifting biotic interactions that threaten communities and endangered species. Some of these changes are direct and clear cut, others are indirect and less clearly connected to climate change; however, all are important in providing insights into the future state of terrestrial ecosystems. We also highlight some of the management issues relevant to conserving terrestrial communities and ecosystems in the face of anthropogenic climate change.

Fragmentation of natural vegetation is currently one of the largest threats to plant populations and their interactions with pollinators. Plant reproductive susceptibility to habitat fragmentation has been investigated in many species; however, the response of wild mass‐flowering species is poorly known, with research limited to mainly boreal plant species. Here, we studied twelve remnant populations of the threatened mass‐flowering shrub Conospermum undulatum in the southwest Australian biodiversity hotspot, each presenting different population size, level of isolation, and floral display. We assessed the impact of fragmentation on (a) fruit and seed production; and (b) seed germination. To gain a deeper understanding of factors influencing the reproductive success of C. undulatum, we performed pollinator exclusion and self‐pollination treatments to experimentally assess the mating system of this threatened shrub. We found C. undulatumto be strictly self‐incompatible and totally reliant on pollinators visiting with an outcrossed pollen load to complete the reproductive cycle. Further, we found that fruit production dropped from 35% to Synthesis and applications. Our results demonstrate the important relationship between pollinators and floral morphology in plants of southwest Australia that have coevolved with native pollinators and developed characteristic flower morphologies over long time frames. Indeed, due to its characteristic pollination mechanism, the self‐incompatible C. undulatum can only rely on specialized native pollinators for pollen flow and cannot rely on its mass‐flowering trait to attract generalist pollinators from coflowering species; neither can it compensate for the lack of visitors by promoting geitonogamy. Consequently, fragmentation has a significant effect on the reproductive output of C. undulatum, and size, isolation, and floral display of populations are important factors to be considered when planning conservation actions for the speci

PREMISE: Recent habitat fragmentation is posing a risk to the wavy‐leaved smokebush, Conospermum undulatum (Proteaceae), a rare plant species endemic to southwestern Western Australia. Microsatellite markers are required to characterize the genetic diversity and structure of the species for conservation purposes and to facilitate ecological studies. METHODS AND RESULTS: Illumina MiSeq high‐throughput sequencing was used to develop 20 novel microsatellite markers for C. undulatum. Polymorphism at each locus was assessed using 72 individuals from three natural populations. Nineteen markers were polymorphic, with the number of alleles per locus ranging from two to 21, and observed and expected heterozygosity ranging from 0.000 to 1.000 and 0.117 to 0.919, respectively. All markers successfully amplified in three congeneric species (C. stoechadis, C. canaliculatum and C. triplinervium). CONCLUSIONS: The microsatellite markers will be useful for revealing patterns of genetic diversity, dispersal dynamics, and hybridization events for C. undulatum to inform future conservation efforts.

Premise of the study: Recent habitat fragmentation is posing a risk to the wavy-leaved smokebush, Conospermum undulatum, a rare plant species endemic to the south-western Western Australia. Microsatellites markers are required to characterize the genetic diversity and structure of the species for conservation purposes and to facilitate ecological studies. Methods and Results: Illumina MiSeq high-throughput sequencing was used to develop 20 novel microsatellite markers for C. undulatum. Polymorphism at each locus was assessed using 72 individuals from three natural populations. Nineteen markers were polymorphic, with the number of alleles per locus ranging from two to 21, and observed and expected heterozygosity ranging from 0.000 to 1.000 and 0.117 to 0.919, respectively. All markers successfully amplified in three congeneric species. Conclusions: The microsatellite markers will be useful for revealing patterns of genetic diversity, dispersal dynamics and hybridization events for C. undulatum to inform future conservation efforts.

Mangrove forests are among the world’s most important ecosystems but are declining rapidly worldwide. Effective conservation management requires a better understanding of the patterns and drivers of gene flow across a range of spatial scales. Despite the capacity for long distance propagule dispersal, field studies suggest that mangrove propagules tend not to disperse far from the release point, which has important implications for the impact of habitat discontinuities on gene flow. We use a comprehensive seascape genomics approach to investigate this concept in the world’s most widely distributed mangrove species, Avicennia marina. Location 21 sites along 2400 km of Western Australian coastline Methods We used 6,162 neutral SNP loci and a hierarchical sampling design to investigate patterns of gene flow and structuring among 21 populations of A. marina. We combined this data with GIS spatial analyses in a regression model to test the relative influence of habitat continuity and geographic distance on patterns of genetic differentiation. We found a complex pattern of gene flow; broadscale isolation-by-distance, disrupted by strong genetic discontinuities that coincided with gaps in mangrove distribution. These genetic discontinuities formed seven discrete subpopulations with negligible evidence for recent migration among them. The regression model combining marine geographic distance and habitat continuity as explanatory variables best fit the data, explaining 86% of the total genetic variation. Our results validate previous assertions that propagule dispersal in A. marina is spatially limited and demonstrate that significant gaps in mangrove distribution present strong barriers to stepping-stone gene flow in this species. This reiterates that dispersive life history features cannot be assumed to lead to widespread connectivity and demonstrates that effective management of these important ecosystem builders should prioritise restoring habitat continuity and minimisi

Determining patterns of plant diversity on granite inselbergs is an important task for conservation biogeography due to mounting threats. However, beyond the tropics there are relatively few quantitative studies of floristic diversity, or consideration of these patterns and their environmental, biogeographic, and historical correlates for conservation. We sought to contribute broader understanding of global patterns of species diversity on granite inselbergs and inform biodiversity conservation in the globally significant Southwest Australian Floristic Region (SWAFR). We surveyed floristics from 16 inselbergs (478 plots) across the climate gradient of the SWAFR stratified into three major habitats on each outcrop. We recorded 1,060 species from 92 families. At the plot level, local soil and topographic variables affecting aridity were correlated with species richness in herbaceous (HO) and woody vegetation (WO) of soil-filled depressions, but not in woody vegetation on deeper soils at the base of outcrops (WOB). At the outcrop level, bioclimatic variables affecting aridity were correlated with species richness in two habitats (WO and WOB) but, contrary to predictions from island biogeography, were not correlated with inselberg area and isolation in any of the three habitats. Species turnover in each of the three habitats was also influenced by aridity, being correlated with bioclimatic variables and with interplot geographic distance, and for HO and WO habitats with local site variables. At the outcrop level, species replacement was the dominant component of species turnover in each of the three habitats, consistent with expectations for long-term stable landscapes. Our results therefore highlight high species diversity and turnover associated with granite outcrop flora. Hence, effective conservation strategies will need to focus on protecting multiple inselbergs across the entire climate gradient of the region.

Determining patterns of plant diversity on granite inselbergs is an important task for conservation biogeography due to mounting threats. However, beyond the tropics there are relatively few quantitative studies of floristic diversity, or consideration of these patterns and their environmental, biogeographic and historical correlates for conservation. We sought to contribute broader understanding of global patterns of species diversity on granite inselbergs and inform biodiversity conservation in the globally significant Southwest Australian Floristic Region (SWAFR). We surveyed floristics from 16 inselbergs (478 plots) across the climate gradient of the SWAFR stratified into three major habitats on each outcrop. We recorded 1060 species from 92 families. At the plot level, local soil and topographic variables affecting aridity were correlated with species richness in herbaceous (HO) and woody vegetation (WO) of soil-filled depressions, but not in woody vegetation on deeper soils at the base of outcrops (WOB). At the outcrop level, bioclimatic variables affecting aridity were correlated with species richness in two habitats (WO and WOB) but, contrary to predictions from island biogeography, were not correlated with inselberg area and isolation in any of the three habitats. Species turnover in each of the three habitats was also influenced by aridity, being correlated with bioclimatic variables and with inter-plot geographic distance, and for HO and WO habitats with local site variables. At the outcrop level, species replacement was the dominant component of species turnover in each of the three habitats, consistent with expectations for long-term stable landscapes. Our results therefore highlight high species diversity and turnover associated with granite outcrop flora. Hence, effective conservation strategies will need to focus on protecting multiple inselbergs across the entire climate gradient of the region.

Margaret Byrne, Muhammad Wasif Saif Northwell Health Cancer Institute, Donald and Barbara Zucker School of Medicine at Hofstra, Lake Success, NY, USA Abstract: Survival of patients with metastatic colorectal cancer (mCRC) has significantly improved in the last decade. Survival gains are not driven by advances in first-line therapy but by incremental additional effects of subsequent treatment lines. To maximize outcomes, patients should receive all active agents. Identification of patient subgroups is increasing individualization of treatment. Novel oral agents, such as regorafenib and TAS-102, as well as promising immunotherapeutic agents have offered salvage treatment options for refractory mCRC. Although most therapeutic developments for mCRC in the chemorefractory setting focuses on new targets and/or more potent agents, reconsideration of established targets has gained importance with the growth of a rational pharmacogenomic approach to drug development, such as HER2. The authors describe treatment options for patients with refractory colon cancer following first- and second-line therapy. Keywords: TKI, fluoropyrimidine, bevacizumab, cetuximab, panitumumab, PD-1 inhibitor, FOLFIRI, epidermal growth factor receptor, vascular endothelial growth factor receptor, platelet-derived growth factor receptors, KRAS, NRAS, HER2, advanced, colon cancer, refractory, Lonsurf, regorafenib

The long term success of revegetation efforts will depend upon the planted species’ resilience to climate change. Many widespread species grow across a range of climatic conditions and, thus, may possess adaptations that could be utilised to improve climate resilience of restored ecosystems. Species can achieve a widespread distribution via two main mechanisms; (1) by diverging into a series of specialised populations, or (2) through high phenotypic plasticity. The extent to which populations are specialised or plastic in response to climate will determine the seed-sourcing strategy required for optimal restoration outcomes under a changing climate. We examined genetic divergence and phenotypic plasticity in two widespread Eucalyptus species (E. tricarpa in southeastern Australia, E. salubris in southwestern Australia), to determine the nature of adaptation to climate in these species, and whether genomic screening might be a useful tool to assess climate adaptation. We examined nine populations of each species across climate gradients and, for E. tricarpa, trees originating from the same populations were also studied in two common garden field trials. We characterised responses in functional traits relevant to climate adaptation, including leaf size, thickness, tissue density, and carbon isotope ratio (δ13C). Genetic variation was assessed with genome scans using DArTseq markers, and ‘outlier markers’ were identified as being linked to regions of the genome that are potentially under selection. Evidence of both plastic response and genetic specialisation for climate was found in both species, indicating that widespread eucalypts utilise a combination of both mechanisms for adaptation to spatial variation in climate. The E. tricarpa common garden data suggested high plasticity in most of the measured functional traits, and the extent of plasticity in some traits (e.g. leaf size and thickness) varied among provenances, suggesting genetic variation for plasticity itse

Aim Mangrove forests are among the world's most important ecosystems but are declining rapidly worldwide. Effective conservation management requires a better understanding of the patterns and drivers of gene flow across a range of spatial scales. Despite the capacity for long‐distance propagule dispersal, field studies suggest that mangrove propagules tend not to disperse far from the release point, which has important implications for the impact of habitat discontinuities on gene flow. We use a comprehensive seascape genomics approach to investigate this concept in the world's most widely distributed mangrove species, Avicennia marina. Location Twenty‐one sites along 2,400 km of Western Australian coastline. Methods We used 6,162 neutral SNP loci and a hierarchical sampling design to investigate patterns of gene flow and structuring among 21 populations of A. marina. We combined these data with GIS spatial analyses in a regression model to test the relative influence of habitat continuity and geographic distance on patterns of genetic differentiation. Results We found a complex pattern of gene flow; broadscale isolation‐by‐distance, disrupted by strong genetic discontinuities that coincided with gaps in mangrove distribution. These genetic discontinuities formed seven discrete subpopulations with negligible evidence for recent migration among them. The regression model combining marine geographic distance and habitat continuity as explanatory variables best fit the data, explaining 86% of the total genetic variation. Main Conclusions Our results validate previous assertions that propagule dispersal in A. marina is spatially limited and demonstrate that significant gaps in mangrove distribution present strong barriers to stepping‐stone gene flow in this species. This reiterates that dispersive life history features cannot be assumed to lead to widespread connectivity and demonstrates that effective management of these important ecosystem builders should prioritize r

Current approaches to biodiversity conservation are largely based on geographic areas, ecosystems, ecological communities, and species, with less attention on genetic diversity and the evolutionary continuum from populations to species. Conservation management generally rests on discrete categories, such as identified species, and, for threated taxa, intraspecific units. Species, in particular, provide a common measure of biodiversity yet in both theory and nature, speciation is typically a protracted process progressing from connected populations to unambiguous species with variable rates of phenotypic, ecological and genetic divergence. Thus, most recognized species are not genetically uniform and are sometimes highly structured into historically isolated populations worthy of consideration as intraspecific units that represent unique genetic diversity for conservation. Genome screens offer unprecedented resolution of structure across taxonomic boundaries in species complexes, and have the potential to oversplit species if not interpreted conservatively. This highlights the blurred line between populations and species, and can confound simple dichotomies of “species” vs. “not species.” At the same time, like plants, there is increasing evidence that even distantly related animal species can hybridize and exchange genes. A review of conservation legislation reveals that legal definitions of “species” are quite flexible and can accommodate a range of infra-specifictaxa and divergent populations, as well as taxonomically recognized species. For example, the legislative definition of a species around the world can include: species, subspecies, varieties, and geographically and/or genetically distinct populations. In principle, this flexibility allows for protection of genetic diversity and maintenance of evolutionary processes at a broad range of infra-specific levels. However, evolutionary biologists often fail to adequately justify and then translate their evidence

Aim Mangrove forests are among the world's most important ecosystems but are declining rapidly worldwide. Effective conservation management requires a better understanding of the patterns and drivers of gene flow across a range of spatial scales. Despite the capacity for long‐distance propagule dispersal, field studies suggest that mangrove propagules tend not to disperse far from the release point, which has important implications for the impact of habitat discontinuities on gene flow. We use a comprehensive seascape genomics approach to investigate this concept in the world's most widely distributed mangrove species, Avicennia marina. Location Twenty‐one sites along 2,400 km of Western Australian coastline. Methods We used 6,162 neutral SNP loci and a hierarchical sampling design to investigate patterns of gene flow and structuring among 21 populations of A. marina. We combined these data with GIS spatial analyses in a regression model to test the relative influence of habitat continuity and geographic distance on patterns of genetic differentiation. Results We found a complex pattern of gene flow; broadscale isolation‐by‐distance, disrupted by strong genetic discontinuities that coincided with gaps in mangrove distribution. These genetic discontinuities formed seven discrete subpopulations with negligible evidence for recent migration among them. The regression model combining marine geographic distance and habitat continuity as explanatory variables best fit the data, explaining 86% of the total genetic variation. Main Conclusions Our results validate previous assertions that propagule dispersal in A. marina is spatially limited and demonstrate that significant gaps in mangrove distribution present strong barriers to stepping‐stone gene flow in this species. This reiterates that dispersive life history features cannot be assumed to lead to widespread connectivity and demonstrates that effective management of these important ecosystem builders should prioritize r

As climates change, restoration programmes need to maximize the capacity of regenerating ecosystems to adapt to new environments, particularly when planting long-lived trees. By using a combined phenotypic and genomic approach, we assessed evidence of adaptation capacity in Eucalyptus loxophleba ssp. lissophloia, a mallee eucalypt important for restoration and oil production in Western Australia. Assessment of leaf traits in nine wild populations across a rainfall gradient showed that two traits were correlated with long-term moisture availability. Populations in more arid environments had lower specific leaf area and lower stomatal conductance, consistent with a stable plastic or adaptive response. Other leaf size and shape traits were correlated with short-term climate variables, suggesting a dynamic plastic response. Genome-wide scans with 4851 DArTseq markers and outlier analysis detected 50 markers showing signals of disruptive selection, consistent with local adaptation. Sixteen markers showed allele frequencies correlated with aridity; three were also associated with differences in stomatal conductance. Multivariate analysis and marker-environment associations signalled secondary directions of adaptation associated with maximum temperatures and soil phosphorus. We suggest that adaptation and acclimation are both likely determinants of functional phenotype in E. loxophleba, and argue that aridity is a critical driver of adaptation in this widespread species.

Widespread species spanning strong environmental (e.g., climatic) gradients frequently display morphological and physiological adaptations to local conditions. Some adaptations are common to different species that occupy similar environments. However, the genomic architecture underlying such convergent traits may not be the same between species. Using genomic data from previous studies of three widespread eucalypt species that grow along rainfall gradients in southern Australia, our probabilistic approach provides evidence that adaptation to aridity is a genome-wide phenomenon, likely to involve multiple and diverse genes, gene families and regulatory regions that affect a multitude of complex genetic and biochemical processes.

Widespread species spanning strong environmental (e.g., climatic) gradients frequently display morphological and physiological adaptations to local conditions. Some adaptations are common to different species that occupy similar environments. However, the genomic architecture underlying such convergent traits may not be the same between species. Using genomic data from previous studies of three widespread eucalypt species that grow along rainfall gradients in southern Australia, our probabilistic approach provides evidence that adaptation to aridity is a genome-wide phenomenon, likely to involve multiple and diverse genes, gene families and regulatory regions that affect a multitude of complex genetic and biochemical processes.

As climates change, restoration programmes need to maximize the capacity of regenerating ecosystems to adapt to new environments, particularly when planting long-lived trees. By using a combined phenotypic and genomic approach, we assessed evidence of adaptation capacity in Eucalyptus loxophleba ssp. lissophloia, a mallee eucalypt important for restoration and oil production in Western Australia. Assessment of leaf traits in nine wild populations across a rainfall gradient showed that two traits were correlated with long-term moisture availability. Populations in more arid environments had lower specific leaf area and lower stomatal conductance, consistent with a stable plastic or adaptive response. Other leaf size and shape traits were correlated with short-term climate variables, suggesting a dynamic plastic response. Genome-wide scans with 4851 DArTseq markers and outlier analysis detected 50 markers showing signals of disruptive selection, consistent with local adaptation. Sixteen markers showed allele frequencies correlated with aridity; three were also associated with differences in stomatal conductance. Multivariate analysis and marker-environment associations signalled secondary directions of adaptation associated with maximum temperatures and soil phosphorus. We suggest that adaptation and acclimation are both likely determinants of functional phenotype in E. loxophleba, and argue that aridity is a critical driver of adaptation in this widespread species.

Microbial inhabitants of soils are important to ecosystem and planetary functions, yet there are large gaps in our knowledge of their diversity and ecology. The ‘Biomes of Australian Soil Environments’ (BASE) project has generated a database of microbial diversity with associated metadata across extensive environmental gradients at continental scale. As the characterisation of microbes rapidly expands, the BASE database provides an evolving platform for interrogating and integrating microbial diversity and function.

Eucalypts are the cornerstone of ecological restoration efforts across the highly modified agricultural landscapes of southern Australia. 'Local provenancing' is the established strategy for sourcing germplasm for ecological restoration plantings, yet this approach gives little consideration to the persistence of these plantings under future climates. This paper provides a synopsis of recent and ongoing research that the authors are undertaking on climate adaptation in eucalypts, combining new genomic approaches with ecophysiological evidence from provenance trials. These studies explore how adaptive diversity is distributed within and among populations, whether populations are buffered against change through capacity for phenotypic plasticity, and how this informs provenancing strategies. Results to date suggest that eucalypts have some capacity to respond to future environmental instability through adaptive phenotypic plasticity or selection of putatively adaptive alleles. Despite this, growing evidence suggests that eucalypts will still be vulnerable to change. Provenancing strategies that exploit adaptations found in non-local provenances could thus confer greater climate-resilience in ecological restoration plantings, although they will also need to account for potential interactions between climate adaptations and other factors (e.g. cryptic evolutionary variation, non-climate-related adaptations, herbivory and elevated CO2).

Microbial inhabitants of soils are important to ecosystem and planetary functions, yet there are large gaps in our knowledge of their diversity and ecology. The ‘Biomes of Australian Soil Environments’ (BASE) project has generated a database of microbial diversity with associated metadata across extensive environmental gradients at continental scale. As the characterisation of microbes rapidly expands, the BASE database provides an evolving platform for interrogating and integrating microbial diversity and function.

Microbial inhabitants of soils are important to ecosystem and planetary functions, yet there are large gaps in our knowledge of their diversity and ecology. The ‘Biomes of Australian Soil Environments’ (BASE) project has generated a database of microbial diversity with associated metadata across extensive environmental gradients at continental scale. As the characterisation of microbes rapidly expands, the BASE database provides an evolving platform for interrogating and integrating microbial diversity and function.

Microbial inhabitants of soils are important to ecosystem and planetary functions, yet there are large gaps in our knowledge of their diversity and ecology. The ‘Biomes of Australian Soil Environments’ (BASE) project has generated a database of microbial diversity with associated metadata across extensive environmental gradients at continental scale. As the characterisation of microbes rapidly expands, the BASE database provides an evolving platform for interrogating and integrating microbial diversity and function.

Microbial inhabitants of soils are important to ecosystem and planetary functions, yet there are large gaps in our knowledge of their diversity and ecology. The ‘Biomes of Australian Soil Environments’ (BASE) project has generated a database of microbial diversity with associated metadata across extensive environmental gradients at continental scale. As the characterisation of microbes rapidly expands, the BASE database provides an evolving platform for interrogating and integrating microbial diversity and function.

Microbial inhabitants of soils are important to ecosystem and planetary functions, yet there are large gaps in our knowledge of their diversity and ecology. The ‘Biomes of Australian Soil Environments’ (BASE) project has generated a database of microbial diversity with associated metadata across extensive environmental gradients at continental scale. As the characterisation of microbes rapidly expands, the BASE database provides an evolving platform for interrogating and integrating microbial diversity and function.

Microbial inhabitants of soils are important to ecosystem and planetary functions, yet there are large gaps in our knowledge of their diversity and ecology. The ‘Biomes of Australian Soil Environments’ (BASE) project has generated a database of microbial diversity with associated metadata across extensive environmental gradients at continental scale. As the characterisation of microbes rapidly expands, the BASE database provides an evolving platform for interrogating and integrating microbial diversity and function.