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High-entropy oxides based on transition metals, such as Mg0.2Co0.2Ni0.2Cu0.2Zn0.2O (TM-HEO), have recently drawn special attention as potential anodes in lithium-ion batteries due to high specific capacity and cycling reversibility. However, the lithiation/delithiation mechanism of such systems is still controversial and not clearly addressed. Here, we report on an operando XAS investigation into TM-HEO-based anodes for lithium-ion cells during the first lithiation/delithiation cycle. This material showed a high specific capacity exceeding 600 mAh g-1 at 0.1 C and Coulombic efficiency very close to unity. The combination of functional and advanced spectroscopic studies revealed complex charging mechanisms, developing through the reduction of transition-metal (TM) cations, which triggers the conversion reaction below 1.0 V. The conversion is irreversible and incomplete, leading to the final collapse of the HEO rock-salt structure. Other redox processes are therefore discussed and called to account for the observed cycling behavior of the TM-HEO-based anode. Despite the irreversible phenomena, the HEO cubic structure remains intact for ∼60% of lithiation capacity, so proving the beneficial role of the configuration entropy in enhancing the stability of the HEO rock-salt structure during the redox phenomena.

Ten global harbours were assessed for sediment quality by quantifying the magnitude of anthropogenic change and ecological risk. Anthropogenic change (enrichment) was high for Derwent River and Sydney estuary, moderate for Santander Harbour, Rio de Janeiro and Dublin Port, slight for Hong Kong, minimal for Darwin. All 10 enrichment indices used showed similar results. Derwent River sediment was rated at high ecological risk, followed by Sydney and Santander estuaries with moderate risk. Auckland and Darwin sediments exhibited minimal ecological risk and sediment in the remaining harbours (Dublin, Hong Kong, Ravenna, Ria de Vigo and Rio de Janeiro) were assessed at slight ecological risk. The extraordinary variety of environments and types/quantities/qualities of data investigated resulted in as much a critique and development of methodology, as an assessment of human impact, including unique techniques for elemental normalisation and contaminant classification. Recommendations for an improved technical framework for sediment quality assessment are provided.

Ten global harbours were assessed for sediment quality by quantifying the magnitude of anthropogenic change and ecological risk. Anthropogenic change (enrichment) was high for Derwent River and Sydney estuary, moderate for Santander Harbour, Rio de Janeiro and Dublin Port, slight for Hong Kong, minimal for Darwin. All 10 enrichment indices used showed similar results. Derwent River sediment was rated at high ecological risk, followed by Sydney and Santander estuaries with moderate risk. Auckland and Darwin sediments exhibited minimal ecological risk and sediment in the remaining harbours (Dublin, Hong Kong, Ravenna, Ria de Vigo and Rio de Janeiro) were assessed at slight ecological risk. The extraordinary variety of environments and types/quantities/qualities of data investigated resulted in as much a critique and development of methodology, as an assessment of human impact, including unique techniques for elemental normalisation and contaminant classification. Recommendations for an improved technical framework for sediment quality assessment are provided.

Urban areas have broad ecological footprints with complex impacts on natural systems. In coastal areas, growing populations are advancing their urban footprint into the ocean through the construction of seawalls and other built infrastructure. While we have some understanding of how urbanisation might drive functional change in terrestrial ecosystems, coastal systems have been largely overlooked. This study is one of the first to directly assess how changes in diversity relate to changes in ecosystem properties and functions (e.g. productivity, filtration rates) of artificial and natural habitats in one of the largest urbanised estuaries in the world, Sydney Harbour. We complemented our surveys with an extensive literature search. We found large and important differences in the community structure and function between artificial and natural coastal habitats. However, differences in diversity and abundance of organisms do not necessarily match observed functional changes. The abundance and composition of important functional groups differed among habitats with rocky shores having 40% and 70% more grazers than seawalls or pilings, respectively. In contrast, scavengers were approximately 8 times more abundant on seawalls than on pilings or rocky shores and algae were more diverse on natural rocky shores and seawalls than on pilings. Our results confirm previous findings in the literature. Oysters were more abundant on pilings than on rocky shores, but were also smaller. Interestingly, these differences in oyster populations did not affect in situ filtration rates between habitats. Seawalls were the most invaded habitats while pilings supported greater secondary productivity than other habitats. This study highlights the complexity of the diversity-function relationship and responses to ocean sprawl in coastal systems. Importantly, we showed that functional properties should be considered independently from structural change if we are to design and manage artificial hab

Habitat-forming species sustain biodiversity and ecosystem functioning in harsh environments through the amelioration of physical stress. Nonetheless, their role in shaping patterns of species distribution under future climate scenarios is generally overlooked. Focusing on coastal systems, we assess how habitat-forming species can influence the ability of stress-sensitive species to exhibit plastic responses, adapt to novel environmental conditions, or track suitable climates. Here, we argue that habitat-former populations could be managed as a nature-based solution against climate-driven loss of biodiversity. Drawing from different ecological and biological disciplines, we identify a series of actions to sustain the resilience of marine habitat-forming species to climate change, as well as their effectiveness and reliability in rescuing stress-sensitive species from increasingly adverse environmental conditions.

Climate-driven range-shifts create evolutionary opportunities for allopatric divergence and subsequent contact, leading to genetic structuration and hybrid zones. We investigate how these processes influenced the evolution of a complex of three closely related Cystoseira spp., which are a key component of the Mediterranean-Atlantic seaweed forests that are undergoing population declines. The C. tamariscifolia complex, composed of C. tamariscifolia s.s., C. amentacea and C. mediterranea, have indistinct boundaries and natural hybridization is suspected. Our aims are to (1) infer the genetic structure and diversity of these species throughout their distribution ranges using microsatellite markers to identify ancient versus recent geographical populations, contact zones and reproductive barriers, and (2) hindcast past distributions using niche models to investigate the influence of past range shifts on genetic divergence at multiple spatial scales. Results supported a single, morphologically plastic species the genetic structure of which was incongruent with a priori species assignments. The low diversity and low singularity in northern European populations suggest recent colonization after the LGM. The southern Iberian genetic hotspot most likely results from the role of this area as a climatic refugium or a secondary contact zone between differentiated populations or both. We hypothesize that life-history traits (selfing, low dispersal) and prior colonization effects, rather than reproductive barriers, might explain the observed genetic discontinuities.

Habitat-forming species sustain biodiversity and ecosystem functioning in harsh environments through the amelioration of physical stress. Nonetheless, their role in shaping patterns of species distribution under future climate scenarios is generally overlooked. Focusing on coastal systems, we assess how habitat-forming species can influence the ability of stress-sensitive species to exhibit plastic responses, adapt to novel environmental conditions, or track suitable climates. Here, we argue that habitat-former populations could be managed as a nature-based solution against climate-driven loss of biodiversity. Drawing from different ecological and biological disciplines, we identify a series of actions to sustain the resilience of marine habitat-forming species to climate change, as well as their effectiveness and reliability in rescuing stress-sensitive species from increasingly adverse environmental conditions.

Urbanisation in terrestrial systems has driven architects, planners, ecologists and engineers to collaborate on the design and creation of more sustainable structures. Examples include the development of ‘green infrastructure’ and the introduction of wildlife corridors that mitigate urban stressors and provide positive ecological outcomes. In contrast, efforts to minimise the impacts of urban developments in marine environments have been far more restricted in their extent and scope, and have often overlooked the ecological role of the built environment as potential habitat. Urban foreshore developments, i.e. those built on the interface of intertidal and/or subtidal zones, have the potential to incorporate clear multi-functional outcomes, by supporting novel ecosystems. We present a step-by-step eco-engineering framework for ‘building blue’ that will allow coastal managers to facilitate planning and construction of sustainable foreshore developments. Adopting such an approach will incorporate ecological principles, thereby mitigating some of the environmental impacts, creating more resilient urban infrastructure and environments, and maximising benefits to the multiple stakeholders and users of marine urban waterfronts.

We investigated how lateral erosion control, measured by novel photogrammetry techniques, is modified by the presence of Spartina spp. vegetation, sediment grain size, and the nutrient status of salt marshes across 230 km of the Italian Northern Adriatic coastline. Spartina spp. vegetation reduced erosion across our study sites. The effect was more pronounced in sandy soils, where erosion was reduced by 80% compared to 17% in silty soils. Erosion resistance was also enhanced by Spartina spp. root biomass. In the absence of vegetation, erosion resistance was enhanced by silt content, with mean erosion 72% lower in silty vs. sandy soils. We found no relevant relationships with nutrient status, likely due to overall high nutrient concentrations and low C:N ratios across all sites. Our results contribute to quantifying coastal protection ecosystem services provided by salt marshes in both sandy and silty sediments.

Changing climate threatens the structure and function of saltmarshes, which are often severely degraded by other human perturbations. Along the Mediterranean coastline, increasing temperature and decreasing rainfall have been hypothesised to trigger habitat shifts from perennial grasses to annual succulents in fragile saltmarsh ecosystems, such as those fringing the North Adriatic coastline. We used manipulative field experiments to investigate the effects of increased temperature, decreased precipitation and increased inundation period associated with rising sea levels on the dominant species in the lower marsh, the perennial grass Spartina spp. and the annual succulent Salicornia veneta. At ambient inundation, the combined effects of increased temperature and decreased precipitation enhanced soil temperature and decreased soil moisture, resulting in an increased number of plants, height and live biomass of S. veneta, as well as greater dead biomass of Spartina spp. compared with current conditions. Increased inundation reduced the soil redox potential, and resulted in losses of both Spartina spp. and S. veneta, but these negative effects were much more pronounced for S. veneta. An inundation tolerance test confirmed that S. veneta is significantly more vulnerable to rapid increases in inundation than Spartina spp. We conclude that at current inundation, the increasing drought conditions in the North Adriatic Sea are favouring the spread of the annual succulent S. veneta. The increasing spread of these succulents could reduce the future capability of the system to respond to projected increasing sea levels, as S. veneta is highly vulnerable to increased inundation. Synthesis. Our results highlight the complex interactions between different components of changing climate. Management strategies for saltmarshes in the Mediterranean and other microtidal locations facing similar changes in climate should focus on maintaining the freshwater and coastal channels free from

We investigated how lateral erosion control, measured by novel photogrammetry techniques, is modified by the presence of Spartina spp. vegetation, sediment grain size, and the nutrient status of salt marshes across 230 km of the Italian Northern Adriatic coastline. Spartina spp. vegetation reduced erosion across our study sites. The effect was more pronounced in sandy soils, where erosion was reduced by 80% compared to 17% in silty soils. Erosion resistance was also enhanced by Spartina spp. root biomass. In the absence of vegetation, erosion resistance was enhanced by silt content, with mean erosion 72% lower in silty vs. sandy soils. We found no relevant relationships with nutrient status, likely due to overall high nutrient concentrations and low C:N ratios across all sites. Our results contribute to quantifying coastal protection ecosystem services provided by salt marshes in both sandy and silty sediments.

Changing climate threatens the structure and function of saltmarshes, which are often severely degraded by other human perturbations. Along the Mediterranean coastline, increasing temperature and decreasing rainfall have been hypothesised to trigger habitat shifts from perennial grasses to annual succulents in fragile saltmarsh ecosystems, such as those fringing the North Adriatic coastline. We used manipulative field experiments to investigate the effects of increased temperature, decreased precipitation and increased inundation period associated with rising sea levels on the dominant species in the lower marsh, the perennial grass Spartina spp. and the annual succulent Salicornia veneta. At ambient inundation, the combined effects of increased temperature and decreased precipitation enhanced soil temperature and decreased soil moisture, resulting in an increased number of plants, height and live biomass of S. veneta, as well as greater dead biomass of Spartina spp. compared with current conditions. Increased inundation reduced the soil redox potential, and resulted in losses of both Spartina spp. and S. veneta, but these negative effects were much more pronounced for S. veneta. An inundation tolerance test confirmed that S. veneta is significantly more vulnerable to rapid increases in inundation than Spartina spp. We conclude that at current inundation, the increasing drought conditions in the North Adriatic Sea are favouring the spread of the annual succulent S. veneta. The increasing spread of these succulents could reduce the future capability of the system to respond to projected increasing sea levels, as S. veneta is highly vulnerable to increased inundation. Synthesis. Our results highlight the complex interactions between different components of changing climate. Management strategies for saltmarshes in the Mediterranean and other microtidal locations facing similar changes in climate should focus on maintaining the freshwater and coastal channels free from

The European Red List of Habitats provides an overview of the risk of collapse (degree of endangerment) of marine, terrestrial and freshwater habitats in the European Union (EU28) and adjacent regions (EU28+), based on a consistent set of categories and criteria, and detailed data and expert knowledge from involved countries. A total of 257 benthic marine habitat types were assessed. In total, 19% (EU28) and 18% (EU28+) of the evaluated habitats were assessed as threatened in categories Critically Endangered, Endangered and Vulnerable. An additional 12% were Near Threatened in the EU28 and 11% in the EU28+. These figures are approximately doubled if Data Deficient habitats are excluded. The percentage of threatened habitat types differs across the regional seas. The highest proportion of threatened habitats in the EU28 was found in the Mediterranean Sea (32%), followed by the North-East Atlantic (23%), the Black Sea (13%) and then the Baltic Sea (8%). There was a similar pattern in the EU28+. The most frequently cited pressures and threats were similar across the four regional seas: pollution (eutrophication), biological resource use other than agriculture or forestry (mainly fishing but also aquaculture), natural system modifications (e.g. dredging and sea defence works), urbanisation and climate change. Even for habitats where the assessment outcome was Data Deficient, the Red List assessment process has resulted in the compilation of a substantial body of useful information to support the conservation of marine habitats.

A comprehensive expert consultation was conducted in order to assess the status, trends and the most important drivers of change in the abundance and geographical distribution of kelp forests in European waters. This consultation included an on-line questionnaire, results from a workshop and data provided by a selected group of experts working on kelp forest mapping and eco-evolutionary research. Differences in status and trends according to geographical areas, species identity and small-scale variations within the same habitat where shown by assembling and mapping kelp distribution and trend data. Significant data gaps for some geographical regions, like the Mediterranean and the southern Iberian Peninsula, were also identified. The data used for this study confirmed a general trend with decreasing abundance of some native kelp species at their southern distributional range limits and increasing abundance in other parts of their distribution (Saccharina latissima and Saccorhiza polyschides). The expansion of the introduced species Undaria pinnatifida was also registered. Drivers of observed changes in kelp forests distribution and abundance were assessed using experts’ opinions. Multiple possible drivers were identified, including global warming, sea urchin grazing, harvesting, pollution and fishing pressure, and their impact varied between geographical areas. Overall, the results highlight major threats for these ecosystems but also opportunities for conservation. Major requirements to ensure adequate protection of coastal kelp ecosystems along European coastlines are discussed, based on the local to regional gaps detected in the study.

A comprehensive expert consultation was conducted in order to assess the status, trends and the most important drivers of change in the abundance and geographical distribution of kelp forests in European waters. This consultation included an on-line questionnaire, results from a workshop and data provided by a selected group of experts working on kelp forest mapping and eco-evolutionary research. Differences in status and trends according to geographical areas, species identity and small-scale variations within the same habitat where shown by assembling and mapping kelp distribution and trend data. Significant data gaps for some geographical regions, like the Mediterranean and the southern Iberian Peninsula, were also identified. The data used for this study confirmed a general trend with decreasing abundance of some native kelp species at their southern distributional range limits and increasing abundance in other parts of their distribution (Saccharina latissima and Saccorhiza polyschides). The expansion of the introduced species Undaria pinnatifida was also registered. Drivers of observed changes in kelp forests distribution and abundance were assessed using experts’ opinions. Multiple possible drivers were identified, including global warming, sea urchin grazing, harvesting, pollution and fishing pressure, and their impact varied between geographical areas. Overall, the results highlight major threats for these ecosystems but also opportunities for conservation. Major requirements to ensure adequate protection of coastal kelp ecosystems along European coastlines are discussed, based on the local to regional gaps detected in the study.

The European Red List of Habitats provides an overview of the risk of collapse (degree of endangerment) of marine, terrestrial and freshwater habitats in the European Union (EU28) and adjacent regions (EU28+), based on a consistent set of categories and criteria, and detailed data and expert knowledge from involved countries. A total of 257 benthic marine habitat types were assessed. In total, 19% (EU28) and 18% (EU28+) of the evaluated habitats were assessed as threatened in categories Critically Endangered, Endangered and Vulnerable. An additional 12% were Near Threatened in the EU28 and 11% in the EU28+. These figures are approximately doubled if Data Deficient habitats are excluded. The percentage of threatened habitat types differs across the regional seas. The highest proportion of threatened habitats in the EU28 was found in the Mediterranean Sea (32%), followed by the North-East Atlantic (23%), the Black Sea (13%) and then the Baltic Sea (8%). There was a similar pattern in the EU28+. The most frequently cited pressures and threats were similar across the four regional seas: pollution (eutrophication), biological resource use other than agriculture or forestry (mainly fishing but also aquaculture), natural system modifications (e.g. dredging and sea defence works), urbanisation and climate change. Even for habitats where the assessment outcome was Data Deficient, the Red List assessment process has resulted in the compilation of a substantial body of useful information to support the conservation of marine habitats.

Background: Shallow nearshore marine ecosystems are changing at an increasing rate due to a range of human activities such as urbanisation and commercial development. The growing numbers of constructions and other physical and structural alterations of the shoreline often take place in nursery and spawning habitats of many fish and other aquatic species. Several coastal fish populations have seen marked declines in abundance and diversity during the past two decades. A systematic review on the topic would clarify if anthropogenic physical and structural changes of near-shore areas have effects on fish recruitment and which these effects are. Methods: The review will examine how various physical and structural anthropogenic changes of nearshore fish habitats affect fish recruitment. Relevant studies include small- and large-scale field studies in marine and brackish systems or large lakes in temperate regions of the Northern and Southern hemispheres. Relevant studies may be based on comparisons between undisturbed and disturbed areas, before and after disturbance, or both. Relevant outcomes include measures of recruitment defined as abundance of juveniles of nearshore fish communities. Searches will be made for peer-reviewed and grey literature in English, Dutch, Danish, Finnish, German, Swedish and Spanish. All fish species and species groups will be considered in this review. Included relevant studies will be subject to a critical appraisal that will assess study validity. From relevant included studies, we will extract information on study characteristics, measured outcomes, exposure, comparators, effect modifiers and critical appraisal. Data synthesis will contain narrative and summary findings of each included study of sufficient quality. Meta-analysis may be possible in cases where studies report similar types of outcomes

Purpose: To investigate the risk of accidents in a cohort of patients with epilepsy and in matched nonepilepsy controls, by type, circumstances, and complications. Methods: A total of 951 children and adults with idiopathic, cryptogenic, or remote symptomatic epilepsy and 904 matched controls seen in secondary and tertiary centers in eight European countries (England, Estonia, Germany, Italy, the Netherlands, Portugal, Russia, and Slovenia) were followed up prospectively for 17,484 and 17,206 person-months and asked to report any accident requiring medical attention, its site, and complications. Risk assessment was done by using actuarial methods, relative risks (RRs), and 95% confidence intervals (CIs). Results: During the study period, 199 (21%) patients and 123 (14%) controls reported an accident (p < 0.0001); 24% were seizure related. The cumulative probability of accidents at 12 and 24 months was 17 and 27% in the cases and 12 and 17% in the controls. The risk was highest for concussions (RR, 2.6; 9.5% CI, 1.2-5.8), abrasions (RR, 2.1; 95% CI, 1.1-4.0), and wounds (RR, 1.9; CI, 1.2-3.1). Domestic accidents prevailed in both groups, followed by street and work accidents, and were more common among cases. Compared with controls, patients with epilepsy reported more hospitalization, complications, and medical action. Disease characteristics associated with an increased risk of accidents included generalized epilepsy (concussions), active epilepsy, and at least monthly seizures (abrasions). Most risks decreased, becoming nonsignificant after excluding seizure-related events. Conclusions: Patients with epilepsy are at higher risk of accidents and their complications. However, the risk was substantially lower after exclusion of seizure-related events.

Underwater cities have long been the subject of science fiction novels and movies, but the "urban sprawl" of artificial structures being developed in marine environments has widespread ecological consequences. The practice of combining ecological principles with the planning, design, and operation of marine artificial structures is gaining in popularity, and examples of successful engineering applications are accumulating. Here we use case studies to explore marine ecological engineering in practice, and introduce a conceptual framework for designing artificial structures with multiple functions. The rate of marine urbanization will almost certainly escalate as "aquatourism" drives the development of underwater accommodations. We show that current and future marine developments could be designed to reduce negative ecological impacts while promoting ecosystem services.

Coastal systems are increasingly threatened by multiple local anthropogenic and global climatic stressors. With the difficulties in remediating global stressors, management requires alternative approaches that focus on local scales. We used manipulative experiments to test whether reducing local stressors (sediment load and nutrient concentrations) can improve the resilience of foundation species (canopy algae along temperate rocky coastlines) to future projected global climate stressors (high wave exposure, increasing sea surface temperature), which are less amenable to management actions. We focused on Fucoids (Cystoseira barbata) along the north-western Adriatic coast in the Mediterranean Sea because of their ecological relevance, sensitivity to a variety of human impacts, and declared conservation priority. At current levels of sediment and nutrients, C. barbata showed negative responses to the simulated future scenarios of high wave exposure and increased sea surface temperature. However, reducing the sediment load increased the survival of C. barbata recruits by 90.24% at high wave exposure while reducing nutrient concentrations resulted in a 20.14% increase in the survival and enhanced the growth of recruited juveniles at high temperature. We conclude that improving water quality by reducing nutrient concentrations, and particularly the sediment load, would significantly increase the resilience of C. barbata populations to projected increases in climate stressors. Developing and applying appropriate targets for specific local anthropogenic stressors could be an effective management action to halt the severe and ongoing loss of key marine habitats

Coastal systems are increasingly threatened by multiple local anthropogenic and global climatic stressors. With the difficulties in remediating global stressors, management requires alternative approaches that focus on local scales. We used manipulative experiments to test whether reducing local stressors (sediment load and nutrient concentrations) can improve the resilience of foundation species (canopy algae along temperate rocky coastlines) to future projected global climate stressors (high wave exposure, increasing sea surface temperature), which are less amenable to management actions. We focused on Fucoids (Cystoseira barbata) along the north-western Adriatic coast in the Mediterranean Sea because of their ecological relevance, sensitivity to a variety of human impacts, and declared conservation priority. At current levels of sediment and nutrients, C. barbata showed negative responses to the simulated future scenarios of high wave exposure and increased sea surface temperature. However, reducing the sediment load increased the survival of C. barbata recruits by 90.24% at high wave exposure while reducing nutrient concentrations resulted in a 20.14% increase in the survival and enhanced the growth of recruited juveniles at high temperature. We conclude that improving water quality by reducing nutrient concentrations, and particularly the sediment load, would significantly increase the resilience of C. barbata populations to projected increases in climate stressors. Developing and applying appropriate targets for specific local anthropogenic stressors could be an effective management action to halt the severe and ongoing loss of key marine habitats.

Coastal systems are increasingly threatened by multiple local anthropogenic and global climatic stressors. With the difficulties in remediating global stressors, management requires alternative approaches that focus on local scales. We used manipulative experiments to test whether reducing local stressors (sediment load and nutrient concentrations) can improve the resilience of foundation species (canopy algae along temperate rocky coastlines) to future projected global climate stressors (high wave exposure, increasing sea surface temperature), which are less amenable to management actions. We focused on Fucoids (Cystoseira barbata) along the north-western Adriatic coast in the Mediterranean Sea because of their ecological relevance, sensitivity to a variety of human impacts, and declared conservation priority. At current levels of sediment and nutrients, C. barbata showed negative responses to the simulated future scenarios of high wave exposure and increased sea surface temperature. However, reducing the sediment load increased the survival of C. barbata recruits by 90.24% at high wave exposure while reducing nutrient concentrations resulted in a 20.14% increase in the survival and enhanced the growth of recruited juveniles at high temperature. We conclude that improving water quality by reducing nutrient concentrations, and particularly the sediment load, would significantly increase the resilience of C. barbata populations to projected increases in climate stressors. Developing and applying appropriate targets for specific local anthropogenic stressors could be an effective management action to halt the severe and ongoing loss of key marine habitats

Aim The global sprawl of marine hard infrastructure (e.g. breakwaters, sea walls and jetties) can extensively modify coastal seascapes, but the knowledge of such impacts remains limited to local scales. We examined the regional-scale effects of marine artificial habitats on the distribution and abundance of assemblages of ascidians, a key group of ecosystem engineer species in benthic fouling systems. Location Five hundred kilometers of coastline in the North Adriatic Sea. Methods We sampled a variety of natural reefs, marine infrastructures and marinas, and tested hypotheses about the role of habitat type and location in influencing the relative distribution and abundance of both native and nonindigenous species. Results Assemblages differed significantly between natural and artificial habitats and among different types of artificial habitats. Non-indigenous species were 2–3 times more abundant on infrastructures built along sedimentary coastlines than on natural rocky reefs or infrastructures built close to rocky coastlines. Conversely, native species were twice as abundant on natural reefs than on nearby infrastructures and were scarce to virtually absent on infrastructures built along sedimentary coasts. The species composition of assemblages in artificial habitats was more similar to that of marinas than of natural reefs, independently of their location. Main conclusions Our results show that marine infrastructures along sandy shores disproportionally favour non-indigenous over native hard bottom species, affecting their spread at regional scales. This is particularly concerning for coastal areas that have low natural densities of rocky reef habitats. We discuss design and management options to improve the quality as habitat of marine infrastructures and to favour their preferential use by native species over nonindigenous ones.

Coastal defence structures are proliferating as a result of rising sea levels and stormier seas. With the realisation that most coastal infrastructure cannot be lost or removed, research is required into ways that coastal defence structures can be built to meet engineering requirements, whilst also providing relevant ecosystem services so-called ecological engineering. This approach requires an understanding of the types of assemblages and their functional roles that are desirable and feasible in these novel ecosystems. We review the major impacts coastal defence structures have on surrounding environments and recent experiments informing building coastal defences in a more ecologically sustainable manner. We summarise research carried out during the THESEUS project (2009-2014) which optimised the design of coastal defence structures with the aim to conserve or restore native species diversity. Native biodiversity could be manipulated on defence structures through various interventions: we created artificial rock pools, pits and crevices on breakwaters; we deployed a precast habitat enhancement unit in a coastal defence scheme; we tested the use of a mixture of stone sizes in gabion baskets; and we gardened native habitat-forming species, such as threatened canopy-forming algae on coastal defence structures. Finally, we outline guidelines and recommendations to provide multiple ecosystem services while maintaining engineering efficacy. This work demonstrated that simple enhancement methods can be cost-effective measures to manage local biodiversity. Care is required, however, in the wholesale implementation of these recommendations without full consideration of the desired effects and overall management goals.

Over the last decades, population densities in coastal areas have strongly increased. At the same time, many intertidal coastal ecosystems that provide valuable services in terms of coastal protection have greatly degraded. As a result, coastal defense has become increasingly dependent on man-made engineering solutions. Ongoing climate change processes such as sea-level rise and increased storminess, require a rethinking of current coastal defense practices including the development of innovative and cost-effective ways to protect coastlines. Integrating intertidal coastal ecosystems within coastal defense schemes offers a promising way forward. In this perspective, we specifically aim to (1) provide insight in the conditions under which ecosystems may be valuable for coastal protection, (2) discuss which might be the most promising intertidal ecosystems for this task and (3) identify knowledge gaps that currently hamper application and hence need attention from the scientific community. Ecosystems can contribute most to coastal protection by wave attenuation in areas with relatively small tidal amplitudes, and/or where intertidal areas are wide. The main knowledge gap hampering application of intertidal ecosystems within coastal defense schemes is lack in ability to account quantitatively for long-term ecosystem dynamics. Such knowledge is essential, as this will determine both the predictability and reliability of their coastal defense function. Solutions integrating intertidal ecosystems in coastal defense schemes offer promising opportunities in some situations, but require better mechanistic understanding of ecosystem dynamics in space and time to enable successful large-scale application.

Over the last decades, population densities in coastal areas have strongly increased. At the same time, many intertidal coastal ecosystems that provide valuable services in terms of coastal protection have greatly degraded. As a result, coastal defense has become increasingly dependent on man-made engineering solutions. Ongoing climate change processes such as sea-level rise and increased storminess, require a rethinking of current coastal defense practices including the development of innovative and cost-effective ways to protect coastlines. Integrating intertidal coastal ecosystems within coastal defense schemes offers a promising way forward. In this perspective, we specifically aim to (1) provide insight in the conditions under which ecosystems may be valuable for coastal protection, (2) discuss which might be the most promising intertidal ecosystems for this task and (3) identify knowledge gaps that currently hamper application and hence need attention from the scientific community. Ecosystems can contribute most to coastal protection by wave attenuation in areas with relatively small tidal amplitudes, and/or where intertidal areas are wide. The main knowledge gap hampering application of intertidal ecosystems within coastal defense schemes is lack in ability to account quantitatively for long-term ecosystem dynamics. Such knowledge is essential, as this will determine both the predictability and reliability of their coastal defense function. Solutions integrating intertidal ecosystems in coastal defense schemes offer promising opportunities in some situations, but require better mechanistic understanding of ecosystem dynamics in space and time to enable successful large-scale application.

Coastal defence structures are proliferating as a result of rising sea levels and stormier seas. With the realisation that most coastal infrastructure cannot be lost or removed, research is required into ways that coastal defence structures can be built to meet engineering requirements, whilst also providing relevant ecosystem services so-called ecological engineering. This approach requires an understanding of the types of assemblages and their functional roles that are desirable and feasible in these novel ecosystems. We review the major impacts coastal defence structures have on surrounding environments and recent experiments informing building coastal defences in a more ecologically sustainable manner. We summarise research carried out during the THESEUS project (2009-2014) which optimised the design of coastal defence structures with the aim to conserve or restore native species diversity. Native biodiversity could be manipulated on defence structures through various interventions: we created artificial rock pools, pits and crevices on breakwaters; we deployed a precast habitat enhancement unit in a coastal defence scheme; we tested the use of a mixture of stone sizes in gabion baskets; and we gardened native habitat-forming species, such as threatened canopy-forming algae on coastal defence structures. Finally, we outline guidelines and recommendations to provide multiple ecosystem services while maintaining engineering efficacy. This work demonstrated that simple enhancement methods can be cost-effective measures to manage local biodiversity. Care is required, however, in the wholesale implementation of these recommendations without full consideration of the desired effects and overall management goals.

ALS is a heterogeneous disease that is not well understood. Epigenetic rearrangements are important in complex disorders including motor neuron diseases. The aim of this study was to determine whether whole-blood DNA methylation (DNA MET %) is a potential modifier of age at onset in ALS. DNA MET % was measured as incorporation of [(3)H]dCTP following HpaII cut in 96 ALS patients and 87 controls, comprising: early-onset (< 55 years of age) and late-onset (> 74 years of age). Methionine (Met) and homocysteine (Hcy) plasma levels were assessed by liquid chromatography selected reaction monitoring coupled with isotope-dilution mass spectrometry. Results showed that DNA MET % was increased in ALS patients independently of age of onset. Compared to the other three groups, Hcy plasma levels were reduced in early-onset ALS patients but Met levels were similar. ROC analysis reported Met levels and DNA MET %, respectively, with a slight and moderate discriminative power. In conclusion, increased DNA MET % is a possible marker of epigenetic dysfunction in ALS independently of age of onset. Further studies dissecting biological determinants of phenotypic complexity in ALS may help in developing successful therapeutic strategies.

In order to establish the importance of the target organ in the activation of bladder carcinogens, we compared rat liver and urothelial cell alpha-hydroxylation activities using as substrates N-nitrosobutyl(4-hydroxybutyl)amine and its metabolite N-nitrosobutyl(3-carboxypropyl)amine, two potent urinary bladder carcinogens in animals. Previous studies have shown that the production of molecular nitrogen can serve as an indicator of nitrosamine alpha-hydroxylation. The use of doubly N-15-labelled nitrosamines and the gas chromatography-mass spectrometric detection of N-15(2) formed gives a measurement of the extent of this metabolic step. Various amounts of N-15-labelled substrates were incubated for 60 min at 37-degrees-C with rat liver S9 preparations or urothelial cell homogenates in the presence of a NADPH generating system. Both enzyme sources metabolized N-15-labelled N-nitrosobutyl(4-hydroxybutyl)amine and N-nitrosobutyl(3-carboxypropyl)amine through the alpha-hydroxylation pathway. Using hepatic S9 fractions, N-15(2) production from N-15-labelled N-nitrosobutyl(4-hydroxybutyl)amine increased from 1.69 +/- 0.02 nmol/h per mg protein (mean +/- S.E.) to 5.78 +/- 0.5 with substrate concentrations ranging between 0.55 and 5.55 mM. N-15(2) produced by urothelial cell homogenates was about 40-50% that of the liver S9. N-15-labelled N-nitrosobutyl(3-carboxypropyl)amine was also metabolized through the alpha-hydroxylation pathway both by hepatic S9 and urothelial cell homogenates, though to a lesser extent. N-15(2) production was about 10-times less than from N-15-labelled N-nitrosobutyl(4-hydroxybutyl)amine, but again urothelial cell N-15(2) production was about 40 - 50% that of the liver. Treatment with phenobarbital resulted in a 2.7-fold increase in the N-15(2) produced from N-15-labelled N-nitrosobutyl(4-hydroxybutyl)amine by hepatic S9. No effect was observed with urothelial cell homogenates.-Acetone treatment had no effect on N-15(2) production from N-15-labelle

A sensitive, specific, and rapid method for quantitating the minor adduct 06-butylguanine (O'BuG) in hydrolyzed DNA has been developed by combining immunoaffinity chromatography and high resolution gas chromatography-negative ion chemical ionization-mass spectrometry. Polyclonal antibodies raised against 06BuG were coupled to CNBr-activated Sepharose 4B and used for sample clean-up and extraction of the specific 06-alkyIguanine. After addition of O'BuG and its deuterium labeled analogue (O'BuG-D7), used as internal standard, hydrolyzed DNA was applied on the immunoaffinity column and washed with water, and the immunoadsorbed butylated guanines were eluted with acetone/ water cetome/water (95/5) before gas chromatographic derivatization. O6BuG and O6BuG-D7 were analyzed and quantitated by high resolution gas chromatography-negative ion chemical ionization-mass spectrometry as their pentafluorobenzyl-trimethylsilyl derivatives. Immunoaffinity column capacity and O'BuG recovery from this column were 1.53 nmol 06BuG/column and 62 ± 5%, respectively. The method was applied to evaluate O'BuG levels in DNA butylated in vitro with 10 mM N-nitroso-Nr-butylurea or isolated from rats given an i.p. dose of 185 mg/kg N-nitroso-N-butylurea or N-nitrosodibutylam-ine. In the first case the level of modifications present in calf thymus DNA was 104 µmol 06BuG/mol guanine, and in the second case O'BuG in liver DNA was about 6 times higher after N-nitroso-N-butylurea (2.11 Mmol O'BuG/mol guanine) than after N-nitrosodibutylamine (0.34 Mmol O'BuG/mol guanine) treatment. These results indicate that O'BuG formed in vivo can be isolated and quantitated by this method, which may also be useful for studying DNA damage and repair mechanisms. © 1990, American Association for Cancer Research. All rights reserved.

Cystoseira species are some of the most important marine ecosystem-engineers, forming extended canopies comparable to land forests. Such forests are sensitive to human disturbances, like the decrease in water quality, the coastal development and the outbreak of herbivores. Conspicuous historical declines have been reported in many regions and several Cystoseira species are presently protected by European Union (EU) environmental policies. The aim of this work was to synthesize the conservation perspectives of Cystoseira forests in the Mediterranean Sea, focusing on the opportunities offered by artificial restoration and highlighting the potential role of Marine Protected Areas (MPAs). MPAs give a better protection to healthy forests than non-managed sites and may be a source of propagules for natural recovery and/or for non-destructive artificial restoration of nearby damaged forests. MPAs lacking Cystoseira forests may also represent preferential sites for reforestation. We proposed a flow-chart for the conservation and a reasoned restoration of Cystoseira in the Mediterranean Sea. The successful conservation of Cystoseira forests is still possible, via raising public awareness on the role of Cystoseira and reducing human impacts on coastal ecosystems. Such actions have to be coupled with more specific large-scale management plans, encompassing restoration actions and enforcement of protection within MPAs.

Many marine populations and ecosystems have experienced strong historical depletions, yet reports of recoveries are increasing. Here, we review the growing research on marine recoveries to reveal how common recovery is, its magnitude, timescale and major drivers. Overall, 10–50% of depleted populations and ecosystems show some recovery, but rarely to former levels of abundance. In addition, recovery can take many decades for long-lived species and complex ecosystems. Major drivers of recovery include the reduction of human impacts, especially exploitation, habitat loss and pollution, combined with favorable life-history and environmental conditions. Awareness, legal protection and enforcement of management plans are also crucial. Learning from historical recovery successes and failures is essential for implementing realistic conservation goals and promising management strategies

Cell-free circulating DNA isolated from the plasma of individuals with cancer has been shown to harbor cancer-associated changes in DNA methylation, and thus it represents an attractive target for biomarker discovery. However, the reliable detection of DNA methylation changes in body fluids has proven to be technically challenging. Here we describe a novel combination of methods that allows quantitative and sensitive detection of DNA methylation in minute amounts of DNA present in body fluids (quantitative Methylation Analysis of Minute DNA amounts after whole Bisulfitome Amplification, qMAMBA). This method involves genome-wide amplification of bisulphite-modified DNA template followed by quantitative methylation detection using pyrosequencing and allows analysis of multiple genes from a small amount of starting DNA. To validate our method we used qMAMBA assays for four genes and LINE1 repetitive sequences combined with plasma DNA samples as a model system. qMAMBA offered high efficacy in the analysis of methylation levels and patterns in plasma samples with extremely small amounts of DNA and low concentrations of methylated alleles. Therefore, qMAMBA will facilitate methylation studies aiming to discover epigenetic biomarkers, and should prove particularly valuable in profiling a large sample series of body fluids from molecular epidemiology studies as well as in tracking disease in early diagnostics.

It is becoming increasingly evident that single-locus effects cannot explain complex multifactorial human diseases like cancer. We applied the multi-factor dimensionality reduction (MDR) method to a large cohort study on gene-environment and gene-gene interactions. The study (case-control nested in the EPIC cohort) was established to investigate molecular changes and genetic susceptibility in relation to air pollution and environmental tobacco smoke (ETS) in non-smokers. We have analyzed 757 controls and 409 cases with bladder cancer (n=124), lung cancer (n=116) and myeloid leukemia (n=169). Thirty-six gene variants (DNA repair and metabolic genes) and three environmental exposure variables (measures of air pollution and ETS at home and at work) were analyzed. Interactions were assessed by prediction error percentage and cross-validation consistency (CVC) frequency. For lung cancer, the best model was given by a significant gene-environment association between the base excision repair (BER) XRCC1-Arg399Gln polymorphism, the double-strand break repair (DSBR) BRCA2-Asn372His polymorphism and the exposure variable 'distance from heavy traffic road', an indirect and robust indicator of air pollution (mean prediction error of 26%, P<0.001, mean CVC of 6.60, P=0.02). For bladder cancer, we found a significant 4-loci association between the BER APE1-Asp148Glu polymorphism, the DSBR RAD52-3'-untranslated region (3'-UTR) polymorphism and the metabolic gene polymorphisms COMT-Val158Met and MTHFR-677C>T (mean prediction error of 22%, P<0.001, mean CVC consistency of 7.40, P<0.037). For leukemia, a 3-loci model including RAD52-2259C>T, MnSOD-Ala9Val and CYP1A1-Ile462Val had a minimum prediction error of 31% (P<0.001) and a maximum CVC of 4.40 (P=0.086). The MDR method seems promising, because it provides a limited number of statistically stable interactions; however, the biological interpretation remains to be understood.

BACKGROUND: We chose a set of candidate single nucleotide polymorphisms (SNPs) to investigate gene-environment interactions in three types of cancer that have been related to air pollution (lung, bladder and myeloid leukemia). PATIENTS AND METHODS: The study has been conducted as a nested case-control study within the European Prospective Investigation into Cancer and Nutrition cohort (409 cancer cases and 757 matched controls). We included never and ex-smokers. SNPs were in genes involved in oxidative stress, phase I metabolizing genes, phase II metabolizing genes and methylenetetrahydrofolate reductase (MTHFR). RESULTS: The most notable findings are: GSTM1 deletion and bladder cancer risk [odds ratio (OR) = 1.60; 95% confidence interval 1.00-2.56]; CYP1A1 and leukemia (2.22, 1.33-3.70; heterozygotes); CYP1B1 and leukemia (0.47, 0.27-0.84; homozygotes); MnSOD and leukemia (1.91, 1.08-3.38; homozygotes) and NQO1 and lung cancer (8.03, 1.73-37.3; homozygotes). Other statistically significant associations were found in subgroups defined by smoking habits (never or ex-smokers), environmental tobacco smoke or gender, with no obvious pattern. When gene variants were organized according to the three main pathways, the emerging picture was of a strong involvement of combined phase I enzymes in leukemia, with an OR of 5 (1.63-15.4) for those having three or more variant alleles. The association was considerably stronger for leukemias arising before the age of 55.

Many biological data sets, from field observations and manipulative experiments, involve crossed factor designs, analysed in a univariate context by higher-way analyses of variance which partition out 'main' and 'interaction' effects. Indeed, tests for significance of interactions among factors, such as differing Before-After responses at Control and Impact sites, are the basis of the widely used BACI strategy for detecting impacts in the environment. There are difficulties, however, in generalising simple univariate definitions of interaction, from classic linear models, to the robust, non-parametric multivariate methods that are commonly required in handling assemblage data. The size of an interaction term, and even its existence at all, depends crucially on the measurement scale, so it is fundamentally a parametric construct. Despite this, certain forms of interaction can be examined using non-parametric methods, namely those evidenced by changing assemblage patterns over many time periods, for replicate sites from different experimental conditions (types of 'Beyond BACI' design) - or changing multivariate structure over space, at many observed times. Second-stage MDS, which can be thought of as an MDS plot of the pairwise similarities between MDS plots (e.g. of assemblage time trajectories), can be used to illustrate such interactions, and they can be formally tested by second-stage ANOSIM permutation tests. Similarities between (first-stage) multivariate patterns are assessed by rank-based matrix correlations, preserving the fully non-parametric approach common in marine community studies. The method is exemplified using time-series data on corals from Thailand, macrobenthos from Tees Bay, UK, and macroalgae from a complex recolonisation experiment carried out in the Ligurian Sea, Italy. The latter data set is also used to demonstrate how the analysis copes straightforwardly with certain repeated-measures designs.