63 results on '"Thomas Oliver"'
Search Results
2. [Muscle injuries: the importance of high-resolution dynamic sonography in diagnostics, treatment and monitoring].
- Author
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Dünkel J, Scheider TO, and Tamborrini G
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- Humans, Image Enhancement methods, Magnetic Resonance Imaging methods, Athletic Injuries diagnostic imaging, Athletic Injuries therapy, Muscle, Skeletal injuries, Muscle, Skeletal diagnostic imaging, Ultrasonography methods
- Abstract
Background: Muscle injuries are common in football. Imaging diagnostics have a major role in establishing a diagnosis. The main diagnostic procedures are MRI and ultrasound. Both diagnostics have advantages and disadvantages, which should be balanced against each other., New Ultrasonic Techniques: The role of MRI as the gold standard is increasingly being replaced by high-resolution ultrasound techniques, and MRI imaging is not always useful. To detect complications in the early stages it is advised to perform regular ultrasound-imaging check-ups. The healing process can be monitored, and it offers additional options for ultrasound-guided interventions such as hematoma punctures and targeted infiltrations., Advantages and Disadvantages: However, ultrasound imaging is highly user dependent. Experienced operators can eliminate this disadvantage, which makes ultrasound a superior imaging system in many areas, especially for dynamic examinations. Nevertheless, MRI imaging remains a necessary imaging method in certain areas., (© 2024. The Author(s).)
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- 2024
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3. An update on clinical presentation and responses to therapy of patients with hereditary hypophosphatemic rickets with hypercalciuria (HHRH).
- Author
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Zhu Z, Bo-Ran Ho B, Chen A, Amrhein J, Apetrei A, Carpenter TO, Lazaretti-Castro M, Colazo JM, McCrystal Dahir K, Geßner M, Gurevich E, Heier CA, Simmons JH, Hunley TE, Hoppe B, Jacobsen C, Kouri A, Ma N, Majumdar S, Molin A, Nokoff N, Ott SM, Peña HG, Santos F, Tebben P, Topor LS, Deng Y, and Bergwitz C
- Subjects
- Humans, Hypercalciuria diagnosis, Hypercalciuria drug therapy, Hypercalciuria genetics, Kidney metabolism, Phosphates, Sodium-Phosphate Cotransporter Proteins, Type IIc genetics, Sodium-Phosphate Cotransporter Proteins, Type IIc metabolism, Familial Hypophosphatemic Rickets complications, Familial Hypophosphatemic Rickets diagnosis, Familial Hypophosphatemic Rickets drug therapy, Hypophosphatemia
- Abstract
Pathogenic variants in solute carrier family 34, member 3 (SLC34A3), the gene encoding the sodium-dependent phosphate cotransporter 2c (NPT2c), cause hereditary hypophosphatemic rickets with hypercalciuria (HHRH). Here, we report a pooled analysis of clinical and laboratory records of 304 individuals from 145 kindreds, including 20 previously unreported HHRH kindreds, in which two novel SLC34A3 pathogenic variants were identified. Compound heterozygous/homozygous carriers show above 90% penetrance for kidney and bone phenotypes. The biochemical phenotype for heterozygous carriers is intermediate with decreased serum phosphate, tubular reabsorption of phosphate (TRP (%)), fibroblast growth factor 23, and intact parathyroid hormone, but increased serum 1,25-dihydroxy vitamin D, and urine calcium excretion causing idiopathic hypercalciuria in 38%, with bone phenotypes still observed in 23% of patients. Oral phosphate supplementation is the current standard of care, which typically normalizes serum phosphate. However, although in more than half of individuals this therapy achieves correction of hypophosphatemia it fails to resolve the other outcomes. The American College of Medical Genetics and Genomics score correlated with functional analysis of frequent SLC34A3 pathogenic variants in vitro and baseline disease severity. The number of mutant alleles and baseline TRP (%) were identified as predictors for kidney and bone phenotypes, baseline TRP (%) furthermore predicted response to therapy. Certain SLC34A3/NPT2c pathogenic variants can be identified with partial responses to therapy, whereas with some overlap, others present only with kidney phenotypes and a third group present only with bone phenotypes. Thus, our report highlights important novel clinical aspects of HHRH and heterozygous carriers, raises awareness to this rare group of disorders and can be a foundation for future studies urgently needed to guide therapy of HHRH., (Copyright © 2024 International Society of Nephrology. Published by Elsevier Inc. All rights reserved.)
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- 2024
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4. AMG 509 (Xaluritamig), an Anti-STEAP1 XmAb 2+1 T-cell Redirecting Immune Therapy with Avidity-Dependent Activity against Prostate Cancer.
- Author
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Nolan-Stevaux O, Li C, Liang L, Zhan J, Estrada J, Osgood T, Li F, Zhang H, Case R, Murawsky CM, Estes B, Moore GL, Bernett MJ, Muchhal U, Desjarlais JR, Staley BK, Stevens J, Cooke KS, Aeffner F, Thomas O, Stieglmaier J, Lee JL, Coxon A, and Bailis JM
- Subjects
- Male, Mice, Animals, Humans, T-Lymphocytes, Immunotherapy, Tumor Microenvironment, Antigens, Neoplasm, Oxidoreductases therapeutic use, Prostatic Neoplasms, Castration-Resistant drug therapy, Prostatic Neoplasms, Castration-Resistant pathology, Antibodies, Bispecific therapeutic use
- Abstract
The tumor-associated antigen STEAP1 is a potential therapeutic target that is expressed in most prostate tumors and at increased levels in metastatic castration-resistant prostate cancer (mCRPC). We developed a STEAP1-targeted XmAb 2+1 T-cell engager (TCE) molecule, AMG 509 (also designated xaluritamig), that is designed to redirect T cells to kill prostate cancer cells that express STEAP1. AMG 509 mediates potent T cell-dependent cytotoxicity of prostate cancer cell lines in vitro and promotes tumor regression in xenograft and syngeneic mouse models of prostate cancer in vivo. The avidity-driven activity of AMG 509 enables selectivity for tumor cells with high STEAP1 expression compared with normal cells. AMG 509 is the first STEAP1 TCE to advance to clinical testing, and we report a case study of a patient with mCRPC who achieved an objective response on AMG 509 treatment., Significance: Immunotherapy in prostate cancer has met with limited success due to the immunosuppressive microenvironment and lack of tumor-specific targets. AMG 509 provides a targeted immunotherapy approach to engage a patient's T cells to kill STEAP1-expressing tumor cells and represents a new treatment option for mCRPC and potentially more broadly for prostate cancer. See related commentary by Hage Chehade et al., p. 20. See related article by Kelly et al., p. 76. This article is featured in Selected Articles from This Issue, p. 5., (©2023 American Association for Cancer Research.)
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- 2024
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5. Thermodynamic characterization of amyloid polymorphism by microfluidic transient incomplete separation.
- Author
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Farzadfard A, Kunka A, Mason TO, Larsen JA, Norrild RK, Dominguez ET, Ray S, and Buell AK
- Abstract
Amyloid fibrils of proteins such as α-synuclein are a hallmark of neurodegenerative diseases and much research has focused on their kinetics and mechanisms of formation. The question as to the thermodynamic stability of such structures has received much less attention. Here, we newly utilize the principle of transient incomplete separation of species in laminar flow in combination with chemical depolymerization for the quantification of amyloid fibril stability. The relative concentrations of fibrils and monomer at equilibrium are determined through an in situ separation of these species based on their different diffusivity inside a microfluidic capillary. The method is highly sample economical, using much less than a microliter of sample per data point and its only requirement is the presence of aromatic residues (W, Y) because of its label-free nature, which makes it widely applicable. Using this method, we investigate the differences in thermodynamic stability between different fibril polymorphs of α-synuclein and quantify these differences for the first time. Importantly, we show that fibril formation can be under kinetic or thermodynamic control and that a change in solution conditions can both stabilise and destabilise amyloid fibrils. Taken together, our results establish the thermodynamic stability as a well-defined and key parameter that can contribute towards a better understanding of the physiological roles of amyloid fibril polymorphism., Competing Interests: Authors declare no conflict of interest., (This journal is © The Royal Society of Chemistry.)
- Published
- 2024
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6. Breast Cancer Stem Cell-Derived Tumors Escape from γδ T-cell Immunosurveillance In Vivo by Modulating γδ T-cell Ligands.
- Author
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Raute K, Strietz J, Parigiani MA, Andrieux G, Thomas OS, Kistner KM, Zintchenko M, Aichele P, Hofmann M, Zhou H, Weber W, Boerries M, Swamy M, Maurer J, and Minguet S
- Subjects
- Humans, Mice, Animals, Monitoring, Immunologic, Neoplasm Recurrence, Local pathology, Neoplastic Stem Cells, Receptors, Antigen, T-Cell, gamma-delta, Triple Negative Breast Neoplasms metabolism
- Abstract
There are no targeted therapies for patients with triple-negative breast cancer (TNBC). TNBC is enriched in breast cancer stem cells (BCSC), which play a key role in metastasis, chemoresistance, relapse, and mortality. γδ T cells hold great potential in immunotherapy against cancer and might provide an approach to therapeutically target TNBC. γδ T cells are commonly observed to infiltrate solid tumors and have an extensive repertoire of tumor-sensing mechanisms, recognizing stress-induced molecules and phosphoantigens (pAgs) on transformed cells. Herein, we show that patient-derived triple-negative BCSCs are efficiently recognized and killed by ex vivo expanded γδ T cells from healthy donors. Orthotopically xenografted BCSCs, however, were refractory to γδ T-cell immunotherapy. We unraveled concerted differentiation and immune escape mechanisms: xenografted BCSCs lost stemness, expression of γδ T-cell ligands, adhesion molecules, and pAgs, thereby evading immune recognition by γδ T cells. Indeed, neither promigratory engineered γδ T cells, nor anti-PD-1 checkpoint blockade, significantly prolonged overall survival of tumor-bearing mice. BCSC immune escape was independent of the immune pressure exerted by the γδ T cells and could be pharmacologically reverted by zoledronate or IFNα treatment. These results pave the way for novel combinatorial immunotherapies for TNBC., (©2023 The Authors; Published by the American Association for Cancer Research.)
- Published
- 2023
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7. The role of reed management and habitat quality on brood parasitism and chick survival of the brood parasitic Common Cuckoo.
- Author
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Mérő TO, Žuljević A, and Lengyel S
- Abstract
Despite efforts on ecosystem restoration and management, biodiversity loss remains one of the major environmental concerns of our time. Beyond the focus on threatened species, animals that indicate regional biodiversity hotspots and population trends, such as brood parasites, should also be targeted by conservation actions. We studied how reed habitat quality and management influence brood parasitism rate and offspring survival in Common Cuckoos Cuculus canorus parasitizing nests of Great Reed Warblers Acrocephalus arundinaceus in six reed habitats in an intensive agricultural landscape. Data collected from 45 sites over 13 years showed that the brood parasitism rate was highest on large canals and was positively influenced by the availability of potential perches (Cuckoo vantage points) and the height where host nests were built. Cuckoo chick survival decreased with water depth and was not affected by other factors. Our results suggest that the habitat-dependent detectability of host nests was central in brood parasitism rate and that water level was central in Cuckoo chick survival. Our study shows that a maintenance of intermediate water levels is the most optimal for maintaining Cuckoo populations in intensive agricultural landscapes. Because brood parasites are excellent bioindicators as their presence predicts regional hotspots of taxonomic and functional diversity as well as population trends in bird communities, knowledge on their habitat requirements is relevant in management targeting diverse bird communities., Competing Interests: The authors declare no competing interests., (© 2023 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.)
- Published
- 2023
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8. Reuse of nests in the Great Reed Warbler Acrocephalus arundinaceus : A behavior to save time and energy and to deter nest parasites?
- Author
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Mérő TO, Žuljević A, Kolykhanova O, and Lengyel S
- Abstract
The reproductive period in animals is a demanding part in their life history. In birds, environmental factors, such as adverse weather, predation, or brood parasitism; and/or anthropogenic disturbance, can limit breeding success, resulting in failure of clutches. The nest loss in open-cup nesting passerines is usually replaced with a new nest with a new clutch, however, in some cases the clutch replacement may occur in unusual forms. In this study, we report on three cases of within-season nest reuse in the Great Reed Warbler. In the first case, a nest was reused for two times in the same season after unsuccessful nesting attempts (two-time nest reuse). After the nest was depredated the first time, the female laid new eggs that were depredated again, then again the female laid new eggs that produced four fledglings. In the second case, the first clutch was depredated, after which the female laid a new clutch in the same nest that was again depredated. In the third case, the female laid new eggs among the eggs that failed to hatch previously. Our observations tend not to be consistent with the predator avoidance hypothesis because the depredated nests were reused by the parents. The time/energy saving hypothesis or possible deterrence of nest parasitism could explain nest reuse in this study, but because of low number of nests reused compared to the total number of nests found, this phenomenon needs further clarification., Competing Interests: The authors claim no conflict of interests., (© 2022 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.)
- Published
- 2022
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9. Novel lectin-based chimeric antigen receptors target Gb3-positive tumour cells.
- Author
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Meléndez AV, Velasco Cárdenas RM, Lagies S, Strietz J, Siukstaite L, Thomas OS, Tomisch J, Weber W, Kammerer B, Römer W, and Minguet S
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- Humans, Lectins metabolism, Polysaccharides metabolism, T-Lymphocytes, Burkitt Lymphoma metabolism, Burkitt Lymphoma therapy, Colorectal Neoplasms, Receptors, Chimeric Antigen
- Abstract
The link between cancer and aberrant glycosylation has recently become evident. Glycans and their altered forms, known as tumour-associated carbohydrate antigens (TACAs), are diverse, complex and difficult to target therapeutically. Lectins are naturally occurring glycan-binding proteins that offer a unique opportunity to recognise TACAs. T cells expressing chimeric antigen receptors (CARs) have proven to be a successful immunotherapy against leukaemias, but so far have shown limited success in solid tumours. We developed a panel of lectin-CARs that recognise the glycosphingolipid globotriaosylceramide (Gb3), which is overexpressed in various cancers, such as Burkitt's lymphoma, colorectal, breast and pancreatic. We have selected the following lectins: Shiga toxin's B-subunit from Shigella dysenteriae, LecA from Pseudomonas aeruginosa, and the engineered lectin Mitsuba from Mytilus galloprovincialis as antigen-binding domains and fused them to a well-known second-generation CAR. The Gb3-binding lectin-CARs have demonstrated target-specific cytotoxicity against Burkitt's lymphoma-derived cell lines as well as solid tumour cells from colorectal and triple-negative breast cancer. Our findings reveal the big potential of lectin-based CARs as therapeutical applications to target Gb3 and other TACAs expressed in haematological malignancies and solid tumours., (© 2022. The Author(s).)
- Published
- 2022
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10. Reversible Shielding and Immobilization of Liposomes and Viral Vectors by Tailored Antibody-Ligand Interactions.
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Thomas OS, Rebmann B, Tonn M, Schirmeister IC, Wehrle S, Becker J, Zea Jimenez GJ, Hook S, Jäger S, Klenzendorf M, Laskowski M, Kaier A, Pütz G, Zurbriggen MD, Weber W, Hörner M, and Wagner HJ
- Subjects
- Animals, Genetic Vectors, Ligands, Mammals, Polymers, Liposomes, Nanoparticles chemistry
- Abstract
Controlling the time and dose of nanoparticulate drug delivery by administration of small molecule drugs holds promise for efficient and safer therapies. This study describes a versatile approach of exploiting antibody-ligand interactions for the design of small molecule-responsive nanocarrier and nanocomposite systems. For this purpose, antibody fragments (scFvs) specific for two distinct small molecule ligands are designed. Subsequently, the surface of nanoparticles (liposomes or adeno-associated viral vectors, AAVs) is modified with these ligands, serving as anchor points for scFv binding. By modifying the scFvs with polymer tails, they can act as a non-covalently bound shielding layer, which is recruited to the anchor points on the nanoparticle surface and prevents interactions with cultured mammalian cells. Administration of an excess of the respective ligand triggers competitive displacement of the shielding layer from the nanoparticle surface and restores nanoparticle-cell interactions. The same principle is applied for developing hydrogel depots that can release integrated AAVs or liposomes in response to small molecule ligands. The liberated nanoparticles subsequently deliver their cargoes to cells. In summary, the utilization of different antibody-ligand interactions, different nanoparticles, and different release systems validates the versatility of the design concept described herein., (© 2021 The Authors. Small published by Wiley-VCH GmbH.)
- Published
- 2022
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11. [Professional caregivers as civilian first responders in prehospital cardiac arrest].
- Author
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Bollen J, van der Leeuw BMF, and Thomas O
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- Caregivers, Humans, Cardiopulmonary Resuscitation, Emergency Medical Services, Emergency Responders, Heart Arrest therapy, Out-of-Hospital Cardiac Arrest therapy
- Abstract
The chance of survival from a prehospital cardiac arrest has increased enormously in recent years thanks to the efforts of civilian first responders. They can start CPR and possibly defibrillate while waiting for the ambulance. These civilian first responders regularly include professional caregivers who can provide advanced life support (ALS) together with ambulance personnel. This article describes the opportunities and challenges, and discusses competence and ability, the use of expertise, and crew resource management (CRM) to ensure that the available knowledge and skills are managed in the right direction. This can further improve the quality of patient care and thus increase the chance of survival.
- Published
- 2022
12. Data-driven forwarding: a typology of digital platforms for road freight transport management.
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Heinbach C, Beinke J, Kammler F, and Thomas O
- Abstract
The omnipresence of digital platforms (DPs) across industries yields platform-based business concepts that disrupt the road freight market, enabling the digitalization of road freight transport management (RFTM). However, the data-driven service capabilities of DPs in supporting RFTM are manifold, and platform research provides opportunities to explore the emerging digital business concepts following the core process of transport management systems (TMSs). This, in particular, results from the side of road freight operators engaged in the transport management process that are increasingly forced to provide customer-centric RFTM via DPs to remain profitable and competitive within a fragmented business environment. Against this backdrop, this paper aims to explore DPs in the road freight transport domain to gain insights into digital freight services and support logistics companies involved in the transportation process with a novel navigation for the identification of required platform-based services. Following the grounded theory methodology, we present a morphological box encompassing 14 dimensions and eight DP types aligned to RFTM. We reveal digital services of DP visibility, optimization, and analytics. With the insights obtained by our research, we contribute to developing a comprehensive understanding of DPs for the enhanced decision-making of transport stakeholders in the area of digital transport management. Our findings provide an established theoretical research ground that guides platforms as markets for practitioners and proposes further research avenues for scholars toward data-driven and digitalized transport logistics., (© The Author(s) 2022.)
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- 2022
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13. German S3 Evidence-Based Guidelines on Focal Therapy in Localized Prostate Cancer: The First Evidence-Based Guidelines on Focal Therapy.
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Borkowetz A, Blana A, Böhmer D, Cash H, Ehrmann U, Franiel T, Henkel TO, Höcht S, Kristiansen G, Machtens S, Niehoff P, Penzkofer T, Pinkawa M, Radtke JP, Roth W, Witzsch U, Ganzer R, Schlemmer HP, Grimm MO, Hakenberg OW, and Schostak M
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- Cryotherapy, Humans, Male, Prospective Studies, Prostatic Neoplasms diagnosis, Prostatic Neoplasms therapy
- Abstract
Background: Focal therapy (FT) is an option to treat localized prostate cancer (PCa) and preserve healthy prostate tissue in order to reduce known side effects from primary whole-gland treatment. The available FT modalities are manifold. Until now, national and international PCa guidelines have been cautious to propose recommendations regarding FT treatment since data from prospective controlled trials are lacking for most FT modalities. Moreover, none of the international guidelines provides a separate section on FT. In this purpose, we provide a synopsis of the consensus-based German S3 guidelines for a possible international use., Summary: The recently published update of the German S3 guidelines, an evidence- and consensus-based guideline, provides a section on FT with recommendations for diagnostic work-up, indications, modalities, and follow-up. This section consists of 12 statements and recommendations for FT in the treatment of localized PCa., Key Message: The German S3 guidelines on PCa are the first to incorporate recommendations for FT based on evidence and expert consensus including indication criteria for FT, pretreatment, and follow-up diagnostic pathways as well as an extended overview of FT techniques and the current supportive evidence., (© 2022 The Author(s). Published by S. Karger AG, Basel.)
- Published
- 2022
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14. Nascent chains can form co-translational folding intermediates that promote post-translational folding outcomes in a disease-causing protein.
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Plessa E, Chu LP, Chan SHS, Thomas OL, Cassaignau AME, Waudby CA, Christodoulou J, and Cabrita LD
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- Algorithms, Amino Acid Sequence, Animals, Blotting, Western, Circular Dichroism, Endopeptidase K metabolism, Humans, Kinetics, Peptides chemistry, Peptides genetics, Peptides metabolism, Protein Processing, Post-Translational, Rabbits, Reticulocytes cytology, Reticulocytes metabolism, alpha 1-Antitrypsin genetics, alpha 1-Antitrypsin metabolism, alpha 1-Antitrypsin Deficiency genetics, Protein Biosynthesis, Protein Folding, Ribosomes metabolism, alpha 1-Antitrypsin chemistry, alpha 1-Antitrypsin Deficiency metabolism
- Abstract
During biosynthesis, proteins can begin folding co-translationally to acquire their biologically-active structures. Folding, however, is an imperfect process and in many cases misfolding results in disease. Less is understood of how misfolding begins during biosynthesis. The human protein, alpha-1-antitrypsin (AAT) folds under kinetic control via a folding intermediate; its pathological variants readily form self-associated polymers at the site of synthesis, leading to alpha-1-antitrypsin deficiency. We observe that AAT nascent polypeptides stall during their biosynthesis, resulting in full-length nascent chains that remain bound to ribosome, forming a persistent ribosome-nascent chain complex (RNC) prior to release. We analyse the structure of these RNCs, which reveals compacted, partially-folded co-translational folding intermediates possessing molten-globule characteristics. We find that the highly-polymerogenic mutant, Z AAT, forms a distinct co-translational folding intermediate relative to wild-type. Its very modest structural differences suggests that the ribosome uniquely tempers the impact of deleterious mutations during nascent chain emergence. Following nascent chain release however, these co-translational folding intermediates guide post-translational folding outcomes thus suggesting that Z's misfolding is initiated from co-translational structure. Our findings demonstrate that co-translational folding intermediates drive how some proteins fold under kinetic control, and may thus also serve as tractable therapeutic targets for human disease., (© 2021. The Author(s).)
- Published
- 2021
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15. [The nose can be the focus of treatment and prophylactic approaches against COVID-19].
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Rusan M, Ovesen TOK, Fuursted K, and Ovesen T
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- Humans, SARS-CoV-2, COVID-19
- Abstract
Infection with SARS-CoV-2 frequently commences in the nasal cavity, yet knowledge about this initial virus-host interaction is sparse. In this review, we update our current understanding of SARS-CoV-2 infection via the nasal epithelium and the associated local immune response. Furthermore, we present considerations to how this interaction may influence the clinical course of COVID-19 and the systemic immune response, and lastly touch upon the potential for intranasal vaccination, intranasal antiviral therapies and immunomodulatory approaches.
- Published
- 2021
16. The PSMA-targeting Half-life Extended BiTE Therapy AMG 160 has Potent Antitumor Activity in Preclinical Models of Metastatic Castration-resistant Prostate Cancer.
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Deegen P, Thomas O, Nolan-Stevaux O, Li S, Wahl J, Bogner P, Aeffner F, Friedrich M, Liao MZ, Matthes K, Rau D, Rattel B, Raum T, Kufer P, Coxon A, and Bailis JM
- Subjects
- Animals, CD3 Complex antagonists & inhibitors, CD3 Complex immunology, CD3 Complex metabolism, Cell Line, Tumor, Cytokines metabolism, Cytotoxicity, Immunologic, Disease Models, Animal, Dose-Response Relationship, Immunologic, Glutamate Carboxypeptidase II antagonists & inhibitors, Humans, Lymphocyte Activation immunology, Male, Mice, Prostatic Neoplasms, Castration-Resistant pathology, T-Lymphocytes metabolism, Treatment Outcome, Xenograft Model Antitumor Assays, Adoptive Transfer methods, Antigens, Surface immunology, Glutamate Carboxypeptidase II immunology, Prostatic Neoplasms, Castration-Resistant drug therapy, Prostatic Neoplasms, Castration-Resistant metabolism, T-Lymphocytes immunology
- Abstract
Purpose: Metastatic castration-resistant prostate cancer (mCRPC) remains a disease with high unmet medical need, as most patients do not achieve durable response with available treatments. Prostate-specific membrane antigen (PSMA) is a compelling target for mCRPC. It is highly expressed by primary and metastatic prostate cancer cells, with increased expression after progression on androgen deprivation therapy., Experimental Design: We developed AMG 160, a half-life extended, bispecific T-cell engager immuno-oncology therapy that binds PSMA on prostate cancer cells and cluster of differentiation 3 on T cells for treatment of mCRPC. AMG 160 was evaluated in vitro and in mCRPC xenograft models. AMG 160 tolerability was assessed in nonhuman primates (NHP). AMG 160 activity as monotherapy and in combination with a PSMA-imaging agent, novel hormonal therapy, and immune checkpoint blockade was evaluated., Results: AMG 160 induces potent, specific killing of PSMA-expressing prostate cancer cell lines in vitro , with half-maximal lysis of 6-42 pmol/L. In vivo , AMG 160 administered weekly at 0.2 mg/kg engages T cells administered systemically and promotes regression of established 22Rv-1 mCRPC xenograft tumors. AMG 160 is compatible with the imaging agent gallium 68-labeled PSMA-11, and shows enhanced cytotoxic activity when combined with enzalutamide or an anti-programmed death-1 antibody. AMG 160 exhibits an extended half-life and has an acceptable safety profile in NHPs., Conclusions: The preclinical characterization of AMG 160 highlights its potent antitumor activity in vitro and in vivo , and its potential for use with known diagnostic or therapeutic agents in mCRPC. These data support the ongoing clinical evaluation of AMG 160 in patients with mCRPC. See related commentary by Kamat et al., p. 2675 ., (©2021 American Association for Cancer Research.)
- Published
- 2021
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17. COVID-19 chez les patients ontariens sous dialyse à long terme.
- Author
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Taji L, Thomas D, Oliver MJ, Ip J, Tang Y, Yeung A, Cooper R, House AA, McFarlane P, and Blake PG
- Abstract
Competing Interests: Intérêts concurrents: Leena Taji, Doneal Thomas, Jane Ip, Yiwen Tang, Angie Yeung et Rebecca Cooper sont des employés salariés du Réseau rénal de l’Ontario (Santé Ontario). Matthew Oliver est propriétaire d’Oliver Medical Management Inc., qui distribue sous licence des logiciels d’analyse pour la gestion de la dialyse et la préparation de rapports. Il a reçu des honoraires à titre de conférencier de Baxter Healthcare et a participé à des comités consultatifs pour Janssen et Amgen. Peter Blake a reçu des honoraires de Baxter Global pour des conférences. Andrew House a reçu des honoraires de Baxter pour des conférences. Phil McFarlane a reçu des honoraires à titre de consultant ou de conférencier d’Amgen, Astra-Zeneca, Bayer, BMS, Boehringer-Ingelheim, GSK, Janssen, Lilly, Novartis, Otsuka, Sanofi-Aventis, Servier et Vifor. Il a aussi reçu des subventions de recherche d’Amgen, Astra-Zeneca, Bayer, Boehringer-Ingelheim et Otsuka. Aucun autre intérêt concurrent n’a été déclaré. Déclaration d’intérêts: Cette étude a bénéficié du soutien de l’IRSS, qui reçoit une subvention annuelle du ministère de la Santé et des Soins de longue durée (MSSLD) de l’Ontario. Les opinions, résultats et conclusions présentés dans cet article n’engagent que ses auteurs et sont indépendants des sources de financement. Aucun appui de la part de l’ICES ou du MSSLD de l’Ontario n’est sous-entendu ni ne devrait être inféré.
- Published
- 2021
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18. Preclinical Assessment of AMG 596, a Bispecific T-cell Engager (BiTE) Immunotherapy Targeting the Tumor-specific Antigen EGFRvIII.
- Author
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Sternjak A, Lee F, Thomas O, Balazs M, Wahl J, Lorenczewski G, Ullrich I, Muenz M, Rattel B, Bailis JM, and Friedrich M
- Subjects
- Animals, Antibodies, Bispecific pharmacology, Brain Neoplasms pathology, Cell Line, Tumor, ErbB Receptors, Glioblastoma pathology, Humans, Mice, Antibodies, Bispecific therapeutic use, Brain Neoplasms drug therapy, Glioblastoma drug therapy, Immunotherapy methods
- Abstract
AMG 596 is a bispecific T-cell engager (BiTE) immuno-oncology therapy in clinical development for treatment of glioblastoma multiforme (GBM), the most common primary brain tumor in adults with limited therapeutic options. AMG 596 is composed of two single-chain variable fragments that simultaneously bind to the tumor-specific antigen, EGFR variant III (EGFRvIII), on GBM cells and to CD3 on T cells, thereby activating T cells to proliferate and secrete cytotoxic substances that induce lysis of the bound tumor cell. T-cell-redirected lysis by AMG 596 is very potent; in vitro studies revealed EC
50 values in the low picomolar range, and in vivo studies showed that AMG 596 treatment significantly increased the overall survival of mice bearing EGFRvIII-expressing orthotopic tumors. In addition, AMG 596 activity is highly specific; no AMG 596-induced T-cell activity can be observed in assays with EGFRvIII-negative GBM cells, and no signs of toxicity and activity were observed in cynomolgus monkeys, which lack expression of EGFRvIII on normal tissues. With EGFRvIII-expressing GBM cells, we showed shedding of EGFRvIII-containing membrane vesicles, followed by vesicle uptake and EGFRvIII cell surface presentation by EGFRvIII noncoding GBM cells. Cell membrane presentation of EGFRvIII following microvesicle transfer allows engagement by AMG 596, resulting in T-cell activation and T-cell-dependent lysis of GBM cells. Together, these data show a compelling preclinical efficacy and safety profile of AMG 596, supporting its development as a novel immunotherapy for treatment of GBM., (©2021 American Association for Cancer Research.)- Published
- 2021
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19. Re: Results of a randomized trial of treatment modalities in patients with low or early‑intermediate risk prostate cancer (PREFERE trial).
- Author
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Boehle A, Kahmann F, Henkel TO, Zimmermann J, and Machtens S
- Subjects
- Humans, Male, Prostatectomy, Brachytherapy, Prostatic Neoplasms
- Abstract
The authors of this "Letter to the Editors" express their major concern about selective and biased reporting in this paper.
- Published
- 2021
- Full Text
- View/download PDF
20. COVID-19 in patients undergoing long-term dialysis in Ontario.
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Taji L, Thomas D, Oliver MJ, Ip J, Tang Y, Yeung A, Cooper R, House AA, McFarlane P, and Blake PG
- Subjects
- Adult, COVID-19 therapy, Disease Transmission, Infectious prevention & control, Female, Humans, Kidney Failure, Chronic epidemiology, Male, Middle Aged, Ontario, Risk Factors, COVID-19 epidemiology, Hemodialysis Units, Hospital statistics & numerical data, Kidney Failure, Chronic therapy, Renal Dialysis statistics & numerical data
- Abstract
Background: Patients undergoing long-term dialysis may be at higher risk of infection with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and of associated disease and mortality. We aimed to describe the incidence, risk factors and outcomes for infection in these patients in Ontario, Canada., Methods: We used linked data sets to compare disease characteristics and mortality between patients receiving long-term dialysis in Ontario who were diagnosed SARS-CoV-2 positive and those who did not acquire SARS-CoV-2 infection, between Mar. 12 and Aug. 20, 2020. We collected data on SARS-CoV-2 infection prospectively. We evaluated risk factors for infection and death using multivariable logistic regression analyses., Results: During the study period, 187 (1.5%) of 12 501 patients undergoing dialysis were diagnosed with SARS-CoV-2 infection. Of those with SARS-CoV-2 infection, 117 (62.6%) were admitted to hospital and the case fatality rate was 28.3%. Significant predictors of infection included in-centre hemodialysis versus home dialysis (odds ratio [OR] 2.54, 95% confidence interval [CI] 1.59-4.05), living in a long-term care residence (OR 7.67, 95% CI 5.30-11.11), living in the Greater Toronto Area (OR 3.27, 95% CI 2.21-4.80), Black ethnicity (OR 3.05, 95% CI 1.95-4.77), Indian subcontinent ethnicity (OR 1.70, 95% CI 1.02-2.81), other non-White ethnicities (OR 2.03, 95% CI 1.38-2.97) and lower income quintiles (OR 1.82, 95% CI 1.15-2.89)., Interpretation: Patients undergoing long-term dialysis are at increased risk of SARS-CoV-2 infection and death from coronavirus disease 2019. Special attention should be paid to addressing risk factors for infection, and these patients should be prioritized for vaccination., Competing Interests: Competing interests: Leena Taji, Doneal Thomas, Jane Ip, Yiwen Tang, Angie Yeung and Rebecca Cooper are salaried employees of Ontario Renal Network, Ontario Health. Matthew Oliver, Phil McFarlane and Peter Blake are contracted Medical Leads at Ontario Renal Network, Ontario Health. Matthew Oliver is owner of Oliver Medical Management Inc., which licenses Dialysis Management Analysis and Reporting System software. He has received honoraria for speaking from Baxter Healthcare and participated on Advisory Boards for Janssen and Amgen. Peter Blake has received honoraria from Baxter Global for speaking engagements. Andrew House has received honoraria from Baxter for speaking engagements. Phil McFarlane has received consultant or lecture fees from Amgen, Astra-Zeneca, Bayer, BMS, Boehringer-Ingelheim, GSK, Janssen, Lilly, Novartis, Otsuka, Sanofi-Aventis, Servier and Vifor. He has also received research grants from Amgen, Astra-Zeneca, Bayer, Boehringer-Ingelheim and Otsuka. No other competing interests were declared., (© 2021 Joule Inc. or its licensors.)
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- 2021
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21. Summary of a workshop on preclinical and translational safety assessment of CD3 bispecifics.
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Kamperschroer C, Shenton J, Lebrec H, Leighton JK, Moore PA, and Thomas O
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- Animals, Antibodies, Bispecific administration & dosage, Antigens, Neoplasm immunology, Antineoplastic Agents administration & dosage, CD3 Complex immunology, CD3 Complex metabolism, Consensus, Consensus Development Conferences as Topic, Cytokine Release Syndrome chemically induced, Cytokine Release Syndrome immunology, Cytokines metabolism, Drug Screening Assays, Antitumor standards, Europe, Humans, Japan, Neoplasms drug therapy, Neoplasms immunology, Receptors, Antigen, T-Cell antagonists & inhibitors, Receptors, Antigen, T-Cell immunology, Receptors, Antigen, T-Cell metabolism, T-Lymphocytes drug effects, T-Lymphocytes immunology, T-Lymphocytes metabolism, Translational Research, Biomedical standards, United States, United States Food and Drug Administration, Antibodies, Bispecific toxicity, Antigens, Neoplasm metabolism, Antineoplastic Agents toxicity, CD3 Complex antagonists & inhibitors, Cytokine Release Syndrome prevention & control
- Abstract
Currently, there is a multitude of CD3 bispecifics with different molecular designs and binding properties in preclinical and clinical development for the treatment of liquid or solid tumors. The key safety concerns with CD3 bispecifics are excessive release of cytokines, which may translate to potentially life-threating cytokine release syndrome (CRS), target organ toxicity due to redirection of T-cells to normal tissues expressing the tumor-associated antigen (TAA) (off-tumor/on-target cytotoxicity), and, in some instances, neurotoxicity. Another key challenge is to arrive at a safe clinical starting dose and an efficient escalating strategy that allows patients in early dose cohorts the potential for clinical benefit in Phase 1 trials. To expand the therapeutic index and bring more treatment options to patients, there are intense efforts to overcome these challenges through improvements in molecular design, preclinical safety assessment strategies, and clinical management practices. A recent workshop at the U.S. Food and Drug Administration (FDA) with industry, academic, and regulatory agency representation was held to discuss the challenges and explore where such improvements to the development of CD3 bispecifics can be implemented. Here, the content of the presentations and the discussion that occurred during this workshop are summarized.
- Published
- 2020
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22. AMG 701 induces cytotoxicity of multiple myeloma cells and depletes plasma cells in cynomolgus monkeys.
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Goldstein RL, Goyos A, Li CM, Deegen P, Bogner P, Sternjak A, Thomas O, Klinger M, Wahl J, Friedrich M, Rattel B, Lamas E, Min X, Sudom A, Farshbaf M, Coxon A, Balazs M, and Arvedson T
- Subjects
- Animals, CD3 Complex, Macaca fascicularis, Mice, Plasma Cells, Xenograft Model Antitumor Assays, Antibodies, Bispecific, Multiple Myeloma drug therapy
- Abstract
Multiple myeloma (MM) is a hematologic malignancy that is characterized by the accumulation of abnormal plasma cells (PCs) in the bone marrow (BM). Patient outcome may be improved with BiTE (bispecific T-cell engager) molecules, which redirect T cells to lyse tumor cells. B-cell maturation antigen (BCMA) supports PC survival and is highly expressed on MM cells. A half-life extended anti-BCMA BiTE molecule (AMG 701) induced selective cytotoxicity against BCMA-expressing MM cells (average half-maximal effective concentration, 18.8 ± 14.8 pM), T-cell activation, and cytokine release in vitro. In a subcutaneous mouse xenograft model, at all doses tested, AMG 701 completely inhibited tumor formation (P < .001), as well as inhibited growth of established tumors (P ≤ .001) and extended survival in an orthotopic MM model (P ≤ .01). To evaluate AMG 701 bioactivity in cynomolgus monkeys, a PC surface phenotype and specific genes were defined to enable a quantitative digital droplet polymerase chain reaction assay (sensitivity, 0.1%). Dose-dependent pharmacokinetic and pharmacodynamic behavior was observed, with depletion of PC-specific genes reaching 93% in blood and 85% in BM. Combination with a programmed cell death protein 1 (PD-1)-blocking antibody significantly increased AMG 701 potency in vitro. A model of AMG 701 binding to BCMA and CD3 indicates that the distance between the T-cell and target cell membranes (ie, the immunological synapse) is similar to that of the major histocompatibility complex class I molecule binding to a T-cell receptor and suggests that the synapse would not be disrupted by the half-life extending Fc domain. These data support the clinical development of AMG 701., (© 2020 by The American Society of Hematology.)
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- 2020
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23. Mitigating Coronavirus Induced Dysfunctional Immunity for At-Risk Populations in COVID-19: Trained Immunity, BCG and "New Old Friends".
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Kleen TO, Galdon AA, MacDonald AS, and Dalgleish AG
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- Aged, Animals, COVID-19, COVID-19 Vaccines, Cancer Vaccines immunology, Coronavirus Infections prevention & control, Coronavirus Infections virology, Humans, Nontuberculous Mycobacteria immunology, Pandemics prevention & control, Pneumonia, Viral prevention & control, Pneumonia, Viral virology, Risk, SARS-CoV-2, Viral Vaccines adverse effects, BCG Vaccine immunology, Betacoronavirus immunology, Coronavirus Infections immunology, Immunity, Cellular, Immunity, Innate, Immunologic Memory immunology, Pneumonia, Viral immunology, Vaccination
- Abstract
The novel, highly contagious coronavirus SARS-CoV-2 spreads rapidly throughout the world, leading to a deadly pandemic of a predominantly respiratory illness called COVID-19. Safe and effective anti-SARS-CoV-2 vaccines are urgently needed. However, emerging immunological observations show hallmarks of significant immunopathological characteristics and dysfunctional immune responses in patients with COVID-19. Combined with existing knowledge about immune responses to other closely related and highly pathogenic coronaviruses, this could forebode significant challenges for vaccine development, including the risk of vaccine failure. Animal data from earlier coronavirus vaccine efforts indicate that elderly people, most at risk from severe COVID-19 disease, could be especially at risk from immunopathologic responses to novel coronavirus vaccines. Bacterial "new old friends" such as Bacille Calmette-Guérin (BCG) or Mycobacterium obuense have the ability to elevate basal systemic levels of type 1 cytokines and immune cells, correlating with increased protection against diverse and unrelated infectious agents, called "trained immunity." Here we describe dysfunctional immune responses induced by coronaviruses, representing potentially difficult to overcome obstacles to safe, effective vaccine development for COVID-19, and outline how trained immunity could help protect high risk populations through immunomodulation with BCG and other "new old friends.", (Copyright © 2020 Kleen, Galdon, MacDonald and Dalgleish.)
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- 2020
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24. A graphical user interface to design high-throughput optogenetic experiments with the optoPlate-96.
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Thomas OS, Hörner M, and Weber W
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- Software, Optogenetics, User-Computer Interface
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- 2020
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25. Depletion of ATP Limits Membrane Excitability of Skeletal Muscle by Increasing Both ClC1-Open Probability and Membrane Conductance.
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Leermakers PA, Dybdahl KLT, Husted KS, Riisager A, de Paoli FV, Pinós T, Vissing J, Krag TOB, and Pedersen TH
- Abstract
Activation of skeletal muscle contractions require that action potentials can be excited and propagated along the muscle fibers. Recent studies have revealed that muscle fiber excitability is regulated during repeated firing of action potentials by cellular signaling systems that control the function of ion channel that determine the resting membrane conductance ( G
m ). In fast-twitch muscle, prolonged firing of action potentials triggers a marked increase in Gm , reducing muscle fiber excitability and causing action potential failure. Both ClC-1 and KATP ion channels contribute to this Gm rise, but the exact molecular regulation underlying their activation remains unclear. Studies in expression systems have revealed that ClC-1 is able to bind adenosine nucleotides, and that low adenosine nucleotide levels result in ClC-1 activation. In three series of experiments, this study aimed to explore whether ClC-1 is also regulated by adenosine nucleotides in native skeletal muscle fibers, and whether the adenosine nucleotide sensitivity of ClC-1 could explain the rise in Gm muscle fibers during prolonged action potential firing. First, whole cell patch clamping of mouse muscle fibers demonstrated that ClC-1 activation shifted in the hyperpolarized direction when clamping pipette solution contained 0 mM ATP compared with 5 mM ATP. Second, three-electrode Gm measurement during muscle fiber stimulation showed that glycolysis inhibition, with 2-deoxy-glucose or iodoacetate, resulted in an accelerated and rapid >400% Gm rise during short periods of repeated action potential firing in both fast-twitch and slow-twitch rat, and in human muscle fibers. Moreover, ClC-1 inhibition with 9-anthracenecarboxylic acid resulted in either an absence or blunted Gm rise during action potential firing in human muscle fibers. Third, Gm measurement during repeated action potential firing in muscle fibers from a murine McArdle disease model suggest that the rise in Gm was accelerated in a subset of fibers. Together, these results are compatible with ClC-1 function being regulated by the level of adenosine nucleotides in native tissue, and that the channel operates as a sensor of skeletal muscle metabolic state, limiting muscle excitability when energy status is low., (Copyright © 2020 Leermakers, Dybdahl, Husted, Riisager, de Paoli, Pinós, Vissing, Krag and Pedersen.)- Published
- 2020
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26. Choice of mobile phase: Implications for size exclusion chromatography-inductively coupled plasma-mass spectrometry analyses of copper, zinc and iron metalloproteins.
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Lago L, Thomas ORB, and Roberts BR
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- Brain metabolism, Chromatography, Liquid, Humans, Molecular Weight, Reference Standards, Chromatography, Gel, Copper analysis, Iron analysis, Mass Spectrometry, Metalloproteins analysis, Spectrophotometry, Atomic, Zinc analysis
- Abstract
The correct identification of the metalloproteins present in human tissues and fluids is essential to our understanding of the cellular mechanisms underpinning a host of health disorders. Separation and analysis of biological samples are typically done via size exclusion chromatography hyphenated with inductively coupled plasma-mass spectrometry (SEC-ICP-MS). Although this technique can be extremely effective in identification of potential metalloproteins, the choice of mobile phase may have a marked effect on results, results by adversely affecting metal-protein bonds of the metalloproteins of interest. To assess the choice of mobile phase on SEC-ICP-MS resolution and the resulting metalloproteome pattern, we analysed several different sample types (brain homogenate; Cu/Zn-superoxide dismutase (SOD1); a molecular weight standard mix containing ferritin (Ft), ceruloplasmin (Cp), cytochrome c (CytC), vitamin B12 (B12) and thyroglobulin (Tg) using six different mobile phase conditions (200 mM, pH 7.5 solutions of ammonium salts nitrate, acetate, and sulfate; HEPES, MOPS and Tris-HCl). Our findings suggest that ammonium nitrate, ammonium acetate and Tris-HCl are optimal choices for the mobile phase, with the specific choice being dependent on both the number of samples and method of detection that is hyphenated with separation. Furthermore, we found that MOPS, HEPES and ammonium sulfate mobile phases all caused significant changes to peak resolution, retention time and overall profile shape. MOPS and HEPES, in particular, produced additional Fe peaks that were not detected with any of the other mobile phases that were investigated. As well as this, MOPS and HEPES both caused significant concentration dependent matrix suppression of the internal standard., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Blaine Roberts receives research support from Agilent Technologies and eMSion inc, (Copyright © 2019 Elsevier B.V. All rights reserved.)
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- 2020
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27. Detection of small molecule concentration gradients in ocular tissues and humours.
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Boughton BA, Thomas ORB, Demarais NJ, Trede D, Swearer SE, and Grey AC
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- Animals, Aqueous Humor diagnostic imaging, Aqueous Humor metabolism, Fishes, Freeze Drying, Glutathione analysis, Mice, Inbred C57BL, Phospholipids analysis, Rabbits, Rats, Wistar, Vitreous Body diagnostic imaging, Vitreous Body metabolism, Eye diagnostic imaging, Eye metabolism, Molecular Imaging methods, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization methods
- Abstract
The eye is an elegant organ consisting of a number of tissues and fluids with specialised functions that together allow it to effectively transmit and transduce light input to the brain for visual perception. One key determinant of this integrated function is the spatial relationship of ocular tissues. Biomolecular distributions within the main ocular tissues cornea, lens, and retina have been studied extensively in isolation, yet the potential for metabolic communication between ocular tissues via the ocular humours has been difficult to visualise. To address this limitation, the current study presents a method to map spatial distributions of metabolites and small molecules in whole eyes, including ocular humours. Using a tape-transfer system and freeze-drying, the spatial distribution of ocular small molecules was investigated in mouse, rat, fish (black bream), and rabbit eyes using negative ion mode MALDI imaging mass spectrometry. Full-scan imaging was used for discovery experiments, while MS/MS imaging for identification and localisation was also demonstrated. In all eyes, metabolites such as glutathione and phospholipids were localised in the main ocular tissues. In addition, in rodent eyes, major metabolites were distributed relatively uniformly in ocular humours. In contrast, both uniform and spatially defined ocular metabolite distributions were observed in the black bream eye. Tissue and ocular humour distributions were reproducible, as demonstrated by the three-dimensional analysis of a mouse eye, and able to be captured with high spatial resolution analysis. The presented method could be used to further investigate the role of inter-tissue metabolism in ocular health, and to support the development of therapeutics to treat major ocular diseases., (© 2019 John Wiley & Sons, Ltd.)
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- 2020
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28. In situ 3D visualization of biomineralization matrix proteins.
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Thomas ORB, Richards KL, Petrou S, Roberts BR, and Swearer SE
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- Animal Shells chemistry, Animal Shells ultrastructure, Animals, Calcium chemistry, Calcium Carbonate, Imaging, Three-Dimensional methods, Nuclear Matrix-Associated Proteins chemistry, Tooth chemistry, Tooth ultrastructure, Biomineralization, Minerals chemistry, Nuclear Matrix-Associated Proteins ultrastructure, Proteins ultrastructure
- Abstract
Calcium biominerals occur in all major animal phyla, and through biomolecular control, exhibit such diverse structures as exoskeletons, shells, bones, teeth and earstones (otoliths). Determining the three-dimensional expression of key biomineral proteins, however, has proven challenging as typical protein identification methods either lose spatial resolution during dissolution of the mineral phase or are costly and limited to two-dimensional expression of high abundance proteins. Here we present a modification of the CLARITY and ACT-PRESTO protocols to visualize and confirm, for the first time, the timing of expression and function of two key regulators of biomineralization., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier Inc. All rights reserved.)
- Published
- 2020
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29. Growth and differentiation factor 15 as a biomarker for mitochondrial myopathy.
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Poulsen NS, Madsen KL, Hornsyld TM, Eisum AV, Fornander F, Buch AE, Stemmerik MG, Ruiz-Ruiz C, Krag TO, and Vissing J
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- Adolescent, Adult, Aged, Biomarkers blood, Biomarkers metabolism, Exercise Test, Female, Gene Expression Regulation physiology, Humans, Male, Middle Aged, Mitochondrial Myopathies genetics, Oxidative Stress, Pilot Projects, Young Adult, Growth Differentiation Factor 15 blood, Mitochondrial Myopathies metabolism
- Abstract
Objective: We investigated if Growth and Differentiation Factor 15 (GDF-15) can be used as a biomarker to distinguish patients with mitochondrial myopathy from patients with other myopathies., Methods: Serum GDF-15 was measured in 28 patients with mitochondrial disease, 24 with metabolic myopathies, 27 with muscular dystrophy and 21 healthy controls., Results and Conclusions: Our findings indicate that elevated GDF-15 can distinguish patients with mitochondrial myopathy from other myopathies, including metabolic myopathies. This suggests that increases in GDF-15 is specific to respiratory chain dysfunction rather than general metabolic dysfunction or muscle defect., (Copyright © 2019 Elsevier B.V. and Mitochondria Research Society. All rights reserved.)
- Published
- 2020
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30. Overcoming Physiological Barriers to Nanoparticle Delivery-Are We There Yet?
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Thomas OS and Weber W
- Abstract
The exploitation of nanosized materials for the delivery of therapeutic agents is already a clinical reality and still holds unrealized potential for the treatment of a variety of diseases. This review discusses physiological barriers a nanocarrier must overcome in order to reach its target, with an emphasis on cancer nanomedicine. Stages of delivery include residence in the blood stream, passive accumulation by virtue of the enhanced permeability and retention effect, diffusion within the tumor lesion, cellular uptake, and arrival at the site of action. We also briefly outline strategies for engineering nanoparticles to more efficiently overcome these challenges: Increasing circulation half-life by shielding with hydrophilic polymers, such as PEG, the limitations of PEG and potential alternatives, targeting and controlled activation approaches. Future developments in these areas will allow us to harness the full potential of nanomedicine., (Copyright © 2019 Thomas and Weber.)
- Published
- 2019
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31. A discussion of the ethics of clinical guidelines.
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Thomas OP
- Subjects
- Beneficence, Humans, Philosophy, Medical, Practice Guidelines as Topic, Virtues, Critical Pathways standards, Ethical Theory, Patient Care ethics, Patient Care psychology
- Abstract
Clinical guidelines are an increasingly common part of medical practice. The desire to standardize practices may seem a noble one, but overzealous application can make guidelines seem restrictive, leading to resentment or, worse, disregard. This conception of guidelines as unbreakable rules can lead to comparisons with deontological duties. Or where guidelines restrict access to services, utilitarianism might seem a better fit. Here, clinical practice guidelines are examined in terms of these theories of normative ethics, and it is argued that in fact, the process of writing and implementing guidelines is more accurately modelled through the lens of virtue ethics., (© 2019 John Wiley & Sons, Ltd.)
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- 2019
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32. Towards Sustainable Environmental Quality: Priority Research Questions for the Australasian Region of Oceania.
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Gaw S, Harford A, Pettigrove V, Sevicke-Jones G, Manning T, Ataria J, Cresswell T, Dafforn KA, Leusch FD, Moggridge B, Cameron M, Chapman J, Coates G, Colville A, Death C, Hageman K, Hassell K, Hoak M, Gadd J, Jolley DF, Karami A, Kotzakoulakis K, Lim R, McRae N, Metzeling L, Mooney T, Myers J, Pearson A, Saaristo M, Sharley D, Stuthe J, Sutherland O, Thomas O, Tremblay L, Wood W, Boxall AB, Rudd MA, and Brooks BW
- Subjects
- Australasia, Environmental Exposure adverse effects, Biodiversity, Climate Change, Ecotoxicology, Environmental Monitoring, Environmental Pollutants adverse effects
- Abstract
Environmental challenges persist across the world, including the Australasian region of Oceania, where biodiversity hotspots and unique ecosystems such as the Great Barrier Reef are common. These systems are routinely affected by multiple stressors from anthropogenic activities, and increasingly influenced by global megatrends (e.g., the food-energy-water nexus, demographic transitions to cities) and climate change. Here we report priority research questions from the Global Horizon Scanning Project, which aimed to identify, prioritize, and advance environmental quality research needs from an Australasian perspective, within a global context. We employed a transparent and inclusive process of soliciting key questions from Australasian members of the Society of Environmental Toxicology and Chemistry. Following submission of 78 questions, 20 priority research questions were identified during an expert workshop in Nelson, New Zealand. These research questions covered a range of issues of global relevance, including research needed to more closely integrate ecotoxicology and ecology for the protection of ecosystems, increase flexibility for prioritizing chemical substances currently in commerce, understand the impacts of complex mixtures and multiple stressors, and define environmental quality and ecosystem integrity of temporary waters. Some questions have specific relevance to Australasia, particularly the uncertainties associated with using toxicity data from exotic species to protect unique indigenous species. Several related priority questions deal with the theme of how widely international ecotoxicological data and databases can be applied to regional ecosystems. Other timely questions, which focus on improving predictive chemistry and toxicology tools and techniques, will be important to answer several of the priority questions identified here. Another important question raised was how to protect local cultural and social values and maintain indigenous engagement during problem formulation and identification of ecosystem protection goals. Addressing these questions will be challenging, but doing so promises to advance environmental sustainability in Oceania and globally., (2019 The Authors. Integrated Environmental Assessment and Management published by Wiley Periodicals, Inc. on behalf of Society of Environmental Toxicology & Chemistry (SETAC).)
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- 2019
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33. Immunization against poly- N -acetylglucosamine reduces neutrophil activation and GVHD while sparing microbial diversity.
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Hülsdünker J, Thomas OS, Haring E, Unger S, Gonzalo Núñez N, Tugues S, Gao Z, Duquesne S, Cywes-Bentley C, Oyardi O, Kirschnek S, Schmitt-Graeff A, Pabst O, Koenecke C, Duyster J, Apostolova P, Blaser MJ, Becher B, Pier GB, Häcker G, and Zeiser R
- Subjects
- Animals, Antibodies, Monoclonal immunology, Bacteria classification, Bacteria drug effects, Female, Graft vs Host Disease immunology, Graft vs Host Disease pathology, Intestines drug effects, Male, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, Neutrophil Activation drug effects, Neutrophils drug effects, Neutrophils immunology, Polysaccharides, Bacterial immunology, Antibodies, Monoclonal administration & dosage, Bacteria immunology, Graft vs Host Disease prevention & control, Immunization, Passive methods, Intestines immunology, Neutrophil Activation immunology, Polysaccharides, Bacterial antagonists & inhibitors
- Abstract
Microbial invasion into the intestinal mucosa after allogeneic hematopoietic cell transplantation (allo-HCT) triggers neutrophil activation and requires antibiotic interventions to prevent sepsis. However, antibiotics lead to a loss of microbiota diversity, which is connected to a higher incidence of acute graft-versus-host disease (aGVHD). Antimicrobial therapies that eliminate invading bacteria and reduce neutrophil-mediated damage without reducing the diversity of the microbiota are therefore highly desirable. A potential solution would be the use of antimicrobial antibodies that target invading pathogens, ultimately leading to their elimination by innate immune cells. In a mouse model of aGVHD, we investigated the potency of active and passive immunization against the conserved microbial surface polysaccharide poly- N -acetylglucosamine (PNAG) that is expressed on numerous pathogens. Treatment with monoclonal or polyclonal antibodies to PNAG (anti-PNAG) or vaccination against PNAG reduced aGVHD-related mortality. Anti-PNAG treatment did not change the intestinal microbial diversity as determined by 16S ribosomal DNA sequencing. Anti-PNAG treatment reduced myeloperoxidase activation and proliferation of neutrophil granulocytes (neutrophils) in the ileum of mice developing GVHD. In vitro, anti-PNAG treatment showed high antimicrobial activity. The functional role of neutrophils was confirmed by using neutrophil-deficient LysM
cre Mcl1fl/fl mice that had no survival advantage under anti-PNAG treatment. In summary, the control of invading bacteria by anti-PNAG treatment could be a novel approach to reduce the uncontrolled neutrophil activation that promotes early GVHD and opens a new avenue to interfere with aGVHD without affecting commensal intestinal microbial diversity., Competing Interests: Conflict of interest statement: G.B.P. is an inventor of intellectual properties (human monoclonal antibody to poly-N-acetylglucosamine [PNAG] and PNAG vaccines) that are licensed by Brigham and Women’s Hospital to Alopexx Vaccine, LLC, and OneBiopharma, Inc., entities in which G.B.P. also holds equity. As an inventor of intellectual properties, G.B.P. also has the right to receive a share of licensing-related income (royalties, fees) through Brigham and Women’s Hospital from OneBiopharma, Inc., and Alopexx Vaccine, LLC. G.B.P.’s interests were reviewed and are managed by the Brigham and Women’s Hospital and Partners Healthcare in accordance with their conflict of interest policies. C.C.-B. is an inventor of intellectual properties (use of human monoclonal antibody to PNAG and use of PNAG vaccines) that are licensed by Brigham and Women’s Hospital to OneBiopharma, Inc. As an inventor of intellectual properties, C.C.-B. also has the right to receive a share of licensing-related income (royalties, fees) through Brigham and Women’s Hospital from OneBiopharma, Inc.- Published
- 2019
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34. Phytochrome-Based Extracellular Matrix with Reversibly Tunable Mechanical Properties.
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Hörner M, Raute K, Hummel B, Madl J, Creusen G, Thomas OS, Christen EH, Hotz N, Gübeli RJ, Engesser R, Rebmann B, Lauer J, Rolauffs B, Timmer J, Schamel WWA, Pruszak J, Römer W, Zurbriggen MD, Friedrich C, Walther A, Minguet S, Sawarkar R, and Weber W
- Abstract
Interrogation and control of cellular fate and function using optogenetics is providing revolutionary insights into biology. Optogenetic control of cells is achieved by coupling genetically encoded photoreceptors to cellular effectors and enables unprecedented spatiotemporal control of signaling processes. Here, a fast and reversibly switchable photoreceptor is used to tune the mechanical properties of polymer materials in a fully reversible, wavelength-specific, and dose- and space-controlled manner. By integrating engineered cyanobacterial phytochrome 1 into a poly(ethylene glycol) matrix, hydrogel materials responsive to light in the cell-compatible red/far-red spectrum are synthesized. These materials are applied to study in human mesenchymal stem cells how different mechanosignaling pathways respond to changing mechanical environments and to control the migration of primary immune cells in 3D. This optogenetics-inspired matrix allows fundamental questions of how cells react to dynamic mechanical environments to be addressed. Further, remote control of such matrices can create new opportunities for tissue engineering or provide a basis for optically stimulated drug depots., (© 2019 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2019
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35. Addition of explicit guidance to acute pancreatitis guidelines increases compliance with amylase measurement recommendations.
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Maidlow SC, Ardagh M, Callender R, and Thomas O
- Subjects
- Clinical Audit, Guideline Adherence organization & administration, Hospital Information Systems statistics & numerical data, Humans, New Zealand, Practice Guidelines as Topic standards, Quality Improvement organization & administration, Amylases analysis, Hospital Departments methods, Hospital Departments standards, Pancreatitis blood, Pancreatitis diagnosis, Practice Patterns, Physicians' standards, Practice Patterns, Physicians' statistics & numerical data
- Abstract
Aim: Hospital HealthPathways is an online database of local clinical guidelines produced by a dedicated team for use within Canterbury District Health Board (CDHB) hospitals. A 'Practice Point'-a bullet point making explicit a recommendation within the body of a clinical guideline-was added to the guideline for acute pancreatitis, instructing users to avoid serial measurements of serum amylase levels. The aim was to explore whether the addition of this Practice Point affected compliance with the amylase measurement recommendations., Method: The number of serum amylase tests requested for patients admitted with acute pancreatitis by GPs and doctors working in the emergency department, general surgery and other departments was audited using the CDHB's online clinical information system. A data set from a six-month period ending three months prior to the addition of the Practice Point, collected for a previous study, was used with the author's permission as a control group. A new data set from a six-month period starting three months after the addition of the Practice Point formed the experimental group., Results: Compliance rose by 13% after the addition of the Practice Point. Before the Practice Point was added to the guideline, 82 of 126 total patients (65%) had amylase measured only once, on admission, in compliance with the Hospital HealthPathway guideline. After the addition of the Practice Point, 142 of 182 patients (78%) had one measurement of amylase. This improvement was seen where patients were referred directly by their GP to the general surgical teams and patients managed by other specialties. Variation in compliance seen over the six-month experimental group period was significant, but did not show a clear trend of either improvement or decay in compliance., Conclusion: This supports the hypothesis that the simple intervention of clarifying a key point within a clinical guideline can have a significant positive effect on compliance. This is an important consideration for guideline authors and institutions publishing clinical guidelines, as poor compliance by clinicians is reported in studies. The intervention in this study is a simple change for guidelines based online, and the significant effect could contribute to improvement in patient-centred, financial and clinical domains., Competing Interests: Nil.
- Published
- 2019
36. The inner ear proteome of fish.
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Thomas ORB, Swearer SE, Kapp EA, Peng P, Tonkin-Hill GQ, Papenfuss A, Roberts A, Bernard P, and Roberts BR
- Subjects
- Animals, Fish Proteins genetics, Fishes genetics, Transcriptome, Fish Proteins metabolism, Fishes metabolism, Otolithic Membrane metabolism, Proteome metabolism
- Abstract
The mechanisms that underpin the formation, growth and composition of otoliths, the biomineralized stones in the inner ear of fish, are largely unknown, as only a few fish inner ear proteins have been reported. Using a partial transcriptome for the inner ear of black bream (Acanthopagrus butcheri), in conjunction with proteomic data, we discovered hundreds of previously unknown proteins in the otolith. This allowed us to develop hypotheses to explain the mechanisms of inorganic material supply and daily formation of growth bands. We further identified a likely protein mediator of crystal nucleation and an explanation for the apparent metabolic inertness of the otolith. Due to the formation of both daily and annual increments, otoliths are routinely employed as natural chronometers, being used for age and growth estimation, fisheries stock assessments, and the reconstruction of habitat use, movement, diet and the impacts of climate change. Our findings provide an unprecedented view of otolith molecular machinery, aiding in the interpretation of these essential archived data., (© 2018 Federation of European Biochemical Societies.)
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- 2019
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37. Generic and reversible opto-trapping of biomolecules.
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Beyer HM, Thomas OS, Riegel N, Zurbriggen MD, Weber W, and Hörner M
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- Antibodies metabolism, Arabidopsis, Green Fluorescent Proteins metabolism, HEK293 Cells, Humans, Intercellular Signaling Peptides and Proteins, Optics and Photonics methods, Phytochrome B metabolism
- Abstract
Molecular traps can control activity and abundance of many biological factors. Here, we report the development of a generic opto-trap to reversibly bind and release biomolecules with high spatiotemporal control by illumination with non-invasive and cell-compatible red and far-red light. We use the Arapidopsis thaliana photoreceptor phytochrome B to regulate the release of diverse proteins from a variety of material scaffolds. Fusion of a short 100 amino acids "PIF-tag", derived from the phytochrome interacting factor 6, renders arbitrary molecules opto-trap-compatible. Reversible opto-trapping of target molecules enables novel possibilities for future developments in diagnostics, therapeutics, and basic research., Statement of Significance: The investigation of cellular signaling events or the development of complex therapeutics and integrative diagnostic devices requires the deliberate control of biomolecule abundance and activity. During recent years, the use of natural photoreceptors within cells leveraged the control of diverse cellular events, benefiting from the superior spatial and temporal control characteristics of light as compared to conventional chemical stimuli. Concurrently, biological switches entailing intrinsic compatibility toward biological environments increasingly found application in biohybrid materials. We employ the plant red/far-red photoreceptor phytochrome B, which reversibly interacts with its phytochrome interacting factors (PIFs), for developing a generic opto-trap. This platform allows the use of red and far-red light to spatiotemporally control binding and release of arbitrary PIF-fused biomolecules from various material scaffolds., (Copyright © 2018 Acta Materialia Inc. Published by Elsevier Ltd. All rights reserved.)
- Published
- 2018
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38. Transcriptional programming of lipid and amino acid metabolism by the skeletal muscle circadian clock.
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Dyar KA, Hubert MJ, Mir AA, Ciciliot S, Lutter D, Greulich F, Quagliarini F, Kleinert M, Fischer K, Eichmann TO, Wright LE, Peña Paz MI, Casarin A, Pertegato V, Romanello V, Albiero M, Mazzucco S, Rizzuto R, Salviati L, Biolo G, Blaauw B, Schiaffino S, and Uhlenhaut NH
- Subjects
- Amino Acids metabolism, Amino Acids physiology, Animals, CLOCK Proteins genetics, Circadian Rhythm genetics, Gene Expression, Homeostasis, Humans, Lipid Metabolism physiology, Lipids, Mice, Mice, Knockout, RNA, Messenger metabolism, ARNTL Transcription Factors physiology, Circadian Clocks physiology, Muscle, Skeletal physiology
- Abstract
Circadian clocks are fundamental physiological regulators of energy homeostasis, but direct transcriptional targets of the muscle clock machinery are unknown. To understand how the muscle clock directs rhythmic metabolism, we determined genome-wide binding of the master clock regulators brain and muscle ARNT-like protein 1 (BMAL1) and REV-ERBα in murine muscles. Integrating occupancy with 24-hr gene expression and metabolomics after muscle-specific loss of BMAL1 and REV-ERBα, here we unravel novel molecular mechanisms connecting muscle clock function to daily cycles of lipid and protein metabolism. Validating BMAL1 and REV-ERBα targets using luciferase assays and in vivo rescue, we demonstrate how a major role of the muscle clock is to promote diurnal cycles of neutral lipid storage while coordinately inhibiting lipid and protein catabolism prior to awakening. This occurs by BMAL1-dependent activation of Dgat2 and REV-ERBα-dependent repression of major targets involved in lipid metabolism and protein turnover (MuRF-1, Atrogin-1). Accordingly, muscle-specific loss of BMAL1 is associated with metabolic inefficiency, impaired muscle triglyceride biosynthesis, and accumulation of bioactive lipids and amino acids. Taken together, our data provide a comprehensive overview of how genomic binding of BMAL1 and REV-ERBα is related to temporal changes in gene expression and metabolite fluctuations., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2018
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39. Ancient genomes document multiple waves of migration in Southeast Asian prehistory.
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Lipson M, Cheronet O, Mallick S, Rohland N, Oxenham M, Pietrusewsky M, Pryce TO, Willis A, Matsumura H, Buckley H, Domett K, Nguyen GH, Trinh HH, Kyaw AA, Win TT, Pradier B, Broomandkhoshbacht N, Candilio F, Changmai P, Fernandes D, Ferry M, Gamarra B, Harney E, Kampuansai J, Kutanan W, Michel M, Novak M, Oppenheimer J, Sirak K, Stewardson K, Zhang Z, Flegontov P, Pinhasi R, and Reich D
- Subjects
- Agriculture history, Asia, Southeastern, Asian People genetics, DNA, Ancient, Genetic Variation, History, Ancient, Humans, Radiometric Dating, Genome, Human, Human Migration history, Language history
- Abstract
Southeast Asia is home to rich human genetic and linguistic diversity, but the details of past population movements in the region are not well known. Here, we report genome-wide ancient DNA data from 18 Southeast Asian individuals spanning from the Neolithic period through the Iron Age (4100 to 1700 years ago). Early farmers from Man Bac in Vietnam exhibit a mixture of East Asian (southern Chinese agriculturalist) and deeply diverged eastern Eurasian (hunter-gatherer) ancestry characteristic of Austroasiatic speakers, with similar ancestry as far south as Indonesia providing evidence for an expansive initial spread of Austroasiatic languages. By the Bronze Age, in a parallel pattern to Europe, sites in Vietnam and Myanmar show close connections to present-day majority groups, reflecting substantial additional influxes of migrants., (Copyright © 2018 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)
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- 2018
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40. Inhibitor of apoptosis proteins are required for effective fusion of autophagosomes with lysosomes.
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Gradzka S, Thomas OS, Kretz O, Haimovici A, Vasilikos L, Wong WW, Häcker G, and Gentle IE
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- Animals, Baculoviral IAP Repeat-Containing 3 Protein genetics, Crohn Disease genetics, Crohn Disease pathology, Inhibitor of Apoptosis Proteins genetics, Lysosomes genetics, Mice, Autophagosomes, Baculoviral IAP Repeat-Containing 3 Protein metabolism, Crohn Disease metabolism, Inhibitor of Apoptosis Proteins metabolism, Lysosomes metabolism, Membrane Fusion, Mitophagy
- Abstract
Inhibitor of Apoptosis Proteins act as E3 ubiquitin ligases to regulate NF-κB signalling from multiple pattern recognition receptors including NOD2, as well as TNF Receptor Superfamily members. Loss of XIAP in humans causes X-linked Lymphoproliferative disease type 2 (XLP-2) and is often associated with Crohn's disease. Crohn's disease is also caused by mutations in the gene encoding NOD2 but the mechanisms behind Crohn's disease development in XIAP and NOD2 deficient-patients are still unknown. Numerous other mutations causing Crohn's Disease occur in genes controlling various aspects of autophagy, suggesting a strong involvement of autophagy in preventing Crohn's disease. Here we show that the IAP proteins cIAP2 and XIAP are required for efficient fusion of lysosomes with autophagosomes. IAP inhibition or loss of both cIAP2 and XIAP resulted in a strong blockage in autophagic flux and mitophagy, suggesting that XIAP deficiency may also drive Crohn's Disease due to defects in autophagy.
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- 2018
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41. Neutrophils provide cellular communication between ileum and mesenteric lymph nodes at graft-versus-host disease onset.
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Hülsdünker J, Ottmüller KJ, Neeff HP, Koyama M, Gao Z, Thomas OS, Follo M, Al-Ahmad A, Prinz G, Duquesne S, Dierbach H, Kirschnek S, Lämmermann T, Blaser MJ, Fife BT, Blazar BR, Beilhack A, Hill GR, Häcker G, and Zeiser R
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- Acute Disease, Animals, Cell Communication drug effects, Cell Communication genetics, Graft vs Host Disease drug therapy, Graft vs Host Disease genetics, Graft vs Host Disease pathology, Ileum pathology, Janus Kinase 1 antagonists & inhibitors, Janus Kinase 1 genetics, Janus Kinase 1 immunology, Janus Kinase 2 antagonists & inhibitors, Janus Kinase 2 genetics, Janus Kinase 2 immunology, Lymph Nodes pathology, Mesentery pathology, Mice, Mice, Inbred BALB C, Mice, Knockout, Neutrophil Infiltration drug effects, Neutrophil Infiltration genetics, Neutrophil Infiltration immunology, Neutrophils pathology, Protein Kinase Inhibitors pharmacology, Cell Communication immunology, Graft vs Host Disease immunology, Ileum immunology, Lymph Nodes immunology, Mesentery immunology, Neutrophils immunology
- Abstract
Conditioning-induced damage of the intestinal tract plays a critical role during the onset of acute graft-versus-host disease (GVHD). Therapeutic interference with these early events of GVHD is difficult, and currently used immunosuppressive drugs mainly target donor T cells. However, not donor T cells but neutrophils reach the sites of tissue injury first, and therefore could be a potential target for GVHD prevention. A detailed analysis of neutrophil fate during acute GVHD and the effect on T cells is difficult because of the short lifespan of this cell type. By using a novel photoconverter reporter system, we show that neutrophils that had been photoconverted in the ileum postconditioning later migrated to mesenteric lymph nodes (mLN). This neutrophil migration was dependent on the intestinal microflora. In the mLN, neutrophils colocalized with T cells and presented antigen on major histocompatibility complex (MHC)-II, thereby affecting T cell expansion. Pharmacological JAK1/JAK2 inhibition reduced neutrophil influx into the mLN and MHC-II expression, thereby interfering with an early event in acute GVHD pathogenesis. In agreement with this finding, neutrophil depletion reduced acute GVHD. We conclude that neutrophils are attracted to the ileum, where the intestinal barrier is disrupted, and then migrate to the mLN, where they participate in alloantigen presentation. JAK1/JAK2-inhibition can interfere with this process, which provides a potential therapeutic strategy to prevent early events of tissue damage-related innate immune cell activation and, ultimately, GVHD., (© 2018 by The American Society of Hematology.)
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- 2018
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42. An Attractive Reelin Gradient Establishes Synaptic Lamination in the Vertebrate Visual System.
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Di Donato V, De Santis F, Albadri S, Auer TO, Duroure K, Charpentier M, Concordet JP, Gebhardt C, and Del Bene F
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- Animals, Animals, Genetically Modified, Cell Adhesion Molecules, Neuronal analysis, Extracellular Matrix Proteins analysis, Nerve Net chemistry, Nerve Tissue Proteins analysis, Reelin Protein, Retinal Ganglion Cells chemistry, Serine Endopeptidases analysis, Synapses chemistry, Visual Pathways chemistry, Zebrafish, Cell Adhesion Molecules, Neuronal biosynthesis, Extracellular Matrix Proteins biosynthesis, Nerve Net metabolism, Nerve Tissue Proteins biosynthesis, Retinal Ganglion Cells metabolism, Serine Endopeptidases biosynthesis, Synapses metabolism, Visual Pathways metabolism
- Abstract
A conserved organizational and functional principle of neural networks is the segregation of axon-dendritic synaptic connections into laminae. Here we report that targeting of synaptic laminae by retinal ganglion cell (RGC) arbors in the vertebrate visual system is regulated by a signaling system relying on target-derived Reelin and VLDLR/Dab1a on the projecting neurons. Furthermore, we find that Reelin is distributed as a gradient on the target tissue and stabilized by heparan sulfate proteoglycans (HSPGs) in the extracellular matrix (ECM). Through genetic manipulations, we show that this Reelin gradient is important for laminar targeting and that it is attractive for RGC axons. Finally, we suggest a comprehensive model of synaptic lamina formation in which attractive Reelin counter-balances repulsive Slit1, thereby guiding RGC axons toward single synaptic laminae. We establish a mechanism that may represent a general principle for neural network assembly in vertebrate species and across different brain areas., (Copyright © 2018 Elsevier Inc. All rights reserved.)
- Published
- 2018
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43. Surgical safety checklist training: a national study of undergraduate medical and nursing student teaching, understanding and influencing factors.
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Kilduff CLS, Leith TO, Drake TM, and Fitzgerald JEF
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- Adult, Education, Medical, Undergraduate methods, Education, Nursing methods, Female, Humans, Male, Medical Errors prevention & control, Safety Management methods, Surgical Procedures, Operative methods, Surveys and Questionnaires, Teaching, United Kingdom, Checklist, Perioperative Care education, Perioperative Care methods, Perioperative Care nursing, Students, Medical psychology, Students, Nursing psychology
- Abstract
Introduction: Use of the WHO surgical safety checklist is consistently recognised to reduce harm caused by human error during the perioperative period. Inconsistent engagement is considered to contribute to persistence of surgical Never Events in the National Health Service. Most medical and nursing graduates will join teams responsible for the perioperative care of patients, therefore appropriate undergraduate surgical safety training is needed., Aims: To investigate UK medical and nursing undergraduate experience of the surgical safety checklist training., Methods: An eight-item electronic questionnaire was distributed electronically to 32 medical schools and 72 nursing schools. Analysis was conducted for the two cohorts, and responses from final year students were included., Results: 87/224 (38.8%) of medical students received teaching on the surgical safety checklist, compared with 380/711 (52.0%) of nursing students. 172/224 (76.8%) of medical students and 489/711 (66.9%) of nursing students understood its purpose and 8/224 (3.6%) medical students and 54/711 (7.4%) nursing students reported never being included in the Time Out. After adjusting for confounding factors, provision of formal teaching in checklist use increased understanding significantly (OR 50.39 (14.07 to 325.79, P<0.001)), as did routine student involvement in time outs (OR 5.72 (2.36 to 14.58, P<0.001))., Discussion: Knowledge of perioperative patient safety systems and the ability to participate in safety protocols are important skills that should be formally taught at the undergraduate level. Results of this study show that UK undergraduate surgical safety checklist training does not meet the minimum standards set by the WHO., Competing Interests: Competing interests: JEFF is Honorary Clinical Advisor the Lifebox Foundation (http://www.lifebox.org/), an international charity working to make surgery safer in low- and middle-income countries. CLSKf has previously undertaken unpaid design work for the Lifebox Foundation., (© Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2018. All rights reserved. No commercial use is permitted unless otherwise expressly granted.)
- Published
- 2018
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44. ICare-ACS (Improving Care Processes for Patients With Suspected Acute Coronary Syndrome): A Study of Cross-System Implementation of a National Clinical Pathway.
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Than MP, Pickering JW, Dryden JM, Lord SJ, Aitken SA, Aldous SJ, Allan KE, Ardagh MW, Bonning JWN, Callender R, Chapman LRE, Christiansen JP, Cromhout APJ, Cullen L, Deely JM, Devlin GP, Ferrier KA, Florkowski CM, Frampton CMA, George PM, Hamilton GJ, Jaffe AS, Kerr AJ, Larkin GL, Makower RM, Matthews TJE, Parsonage WA, Peacock WF, Peckler BF, van Pelt NC, Poynton L, Richards AM, Scott AG, Simmonds MB, Smyth D, Thomas OP, To ACY, Du Toit SA, Troughton RW, and Yates KM
- Subjects
- Acute Coronary Syndrome blood, Acute Coronary Syndrome epidemiology, Acute Coronary Syndrome therapy, Aged, Aged, 80 and over, Biomarkers blood, Clinical Decision-Making, Electrocardiography, Female, Humans, Length of Stay, Male, Middle Aged, New Zealand epidemiology, Predictive Value of Tests, Prevalence, Prognosis, Risk Assessment, Risk Factors, Time Factors, Troponin blood, Acute Coronary Syndrome diagnosis, Cardiology Service, Hospital standards, Critical Pathways standards, Emergency Service, Hospital standards, Hospitalization, Quality Improvement standards, Quality Indicators, Health Care standards
- Abstract
Background: Efforts to safely reduce length of stay for emergency department patients with symptoms suggestive of acute coronary syndrome (ACS) have had mixed success. Few system-wide efforts affecting multiple hospital emergency departments have ever been evaluated. We evaluated the effectiveness of a nationwide implementation of clinical pathways for potential ACS in disparate hospitals., Methods: This was a multicenter pragmatic stepped-wedge before-and-after trial in 7 New Zealand acute care hospitals with 31 332 patients investigated for suspected ACS with serial troponin measurements. The implementation was a clinical pathway for the assessment of patients with suspected ACS that included a clinical pathway document in paper or electronic format, structured risk stratification, specified time points for electrocardiographic and serial troponin testing within 3 hours of arrival, and directions for combining risk stratification and electrocardiographic and troponin testing in an accelerated diagnostic protocol. Implementation was monitored for >4 months and compared with usual care over the preceding 6 months. The main outcome measure was the odds of discharge within 6 hours of presentation RESULTS: There were 11 529 participants in the preimplementation phase (range, 284-3465) and 19 803 in the postimplementation phase (range, 395-5039). Overall, the mean 6-hour discharge rate increased from 8.3% (range, 2.7%-37.7%) to 18.4% (6.8%-43.8%). The odds of being discharged within 6 hours increased after clinical pathway implementation. The odds ratio was 2.4 (95% confidence interval, 2.3-2.6). In patients without ACS, the median length of hospital stays decreased by 2.9 hours (95% confidence interval, 2.4-3.4). For patients discharged within 6 hours, there was no change in 30-day major adverse cardiac event rates (0.52% versus 0.44%; P =0.96). In these patients, no adverse event occurred when clinical pathways were correctly followed., Conclusions: Implementation of clinical pathways for suspected ACS reduced the length of stay and increased the proportions of patients safely discharged within 6 hours., Clinical Trial Registration: URL: https://www.anzctr.org.au/ (Australian and New Zealand Clinical Trials Registry). Unique identifier: ACTRN12617000381381., (© 2017 American Heart Association, Inc.)
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- 2018
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45. Visualization of early influenza A virus trafficking in human dendritic cells using STED microscopy.
- Author
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Baharom F, Thomas OS, Lepzien R, Mellman I, Chalouni C, and Smed-Sörensen A
- Subjects
- Dendritic Cells metabolism, Dendritic Cells virology, Endosomes virology, Epithelial Cells ultrastructure, Epithelial Cells virology, HLA-DR Antigens isolation & purification, Humans, Influenza A virus genetics, Influenza A virus isolation & purification, Influenza A virus pathogenicity, Lysosomal Membrane Proteins isolation & purification, Microscopy, Nucleocapsid Proteins, RNA-Binding Proteins genetics, RNA-Binding Proteins isolation & purification, Vesicular Transport Proteins isolation & purification, Viral Core Proteins genetics, Viral Core Proteins isolation & purification, Virion genetics, Virion pathogenicity, Virus Replication genetics, Dendritic Cells ultrastructure, Host-Pathogen Interactions, Influenza A virus ultrastructure, Virion ultrastructure
- Abstract
Influenza A viruses (IAV) primarily target respiratory epithelial cells, but can also replicate in immune cells, including human dendritic cells (DCs). Super-resolution microscopy provides a novel method of visualizing viral trafficking by overcoming the resolution limit imposed by conventional light microscopy, without the laborious sample preparation of electron microscopy. Using three-color Stimulated Emission Depletion (STED) microscopy, we visualized input IAV nucleoprotein (NP), early and late endosomal compartments (EEA1 and LAMP1 respectively), and HLA-DR (DC membrane/cytosol) by immunofluorescence in human DCs. Surface bound IAV were internalized within 5 min of infection. The association of virus particles with early endosomes peaked at 5 min when 50% of NP+ signals were also EEA1+. Peak association with late endosomes occurred at 15 min when 60% of NP+ signals were LAMP1+. At 30 min of infection, the majority of NP signals were in the nucleus. Our findings illustrate that early IAV trafficking in human DCs proceeds via the classical endocytic pathway.
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- 2017
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46. Trace element-protein interactions in endolymph from the inner ear of fish: implications for environmental reconstructions using fish otolith chemistry.
- Author
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Thomas OR, Ganio K, Roberts BR, and Swearer SE
- Subjects
- Animals, Fishes growth & development, Otolithic Membrane metabolism, Ear, Inner metabolism, Endolymph metabolism, Environment, Fish Proteins metabolism, Fishes metabolism, Otolithic Membrane chemistry, Trace Elements metabolism
- Abstract
Otoliths, the biomineralised hearing "ear stones" from the inner ear of fish, grow throughout the lifespan of an individual, with deposition of alternating calciferous and proteinaceous bands occurring daily. Trace element : calcium ratios within daily increments measured by laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS) are often used in fisheries science to reconstruct environmental histories. There is, however, considerable uncertainty as to which elements are interacting with either the proteinaceous or calciferous zones of the otolith, and thus their utility as indicators of environmental change. To answer this, we used size exclusion chromatography-inductively coupled plasma-mass spectrometry (SEC-ICP-MS) of endolymph, the otolith growth medium, to determine the binding interactions for a range of elements. In addition, we used solution ICP-MS to quantify element concentrations in paired otolith and endolymph samples and determined relative enrichment factors for each. We found 12 elements that are present only in the proteinaceous fraction, 6 that are present only in the salt fraction, and 4 that are present in both. These findings have important implications for the reconstruction of environmental histories based on changes in otolith elemental composition: (1) elements occurring only in the salt fraction are most likely to reflect changes in the physico-chemical environment experienced during life; (2) elements occurring only in the proteinaceous fraction are more likely to reflect physiological rather than environmental events; and (3) elements occurring in both the salt and proteinaceous fractions are likely to be informative about both endogenous and exogenous processes, potentially reducing their utility in environmental reconstructions.
- Published
- 2017
- Full Text
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47. Comparing the academic performance of graduate-entry and undergraduate medical students at a UK medical school.
- Author
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Knight J, Stead AP, and Geyton TO
- Subjects
- Education, Medical, Undergraduate statistics & numerical data, Female, Humans, Male, Schools, Medical organization & administration, United Kingdom, Academic Performance statistics & numerical data, Education, Medical, Undergraduate methods, Students, Medical statistics & numerical data
- Abstract
Background: The aim of the study was to assess whether graduate-entry (GE) medicine is a valid route to medical school in the United Kingdom. We set out to analyze the academic performance of GE students when compared with undergraduate (UG) students by assessing the representation of high achievers and students with fail grades within the two cohorts., Methods: Using the Freedom of Information Act, we requested examination result data for the academic year 2013-2014 at St. George's Medical School, London, UK. We analyzed the number of students gaining distinction (top 7.5%) and those in the first two deciles., Results: There were 389 GE and 548 UG students in the clinical years. A total of 61.3% of the first or second decile places were awarded to GEs, with 38.7% going to UGs (P < 0.0005). The proportion of GEs achieving the first or second decile was 30.1% compared to 12.8% of UGs (P < 0.01). The proportion of GEs awarded distinction was 12.3% compared to 2.9% of UGs (P < 0.02). The total number of students failing a year at the first attempt was 103. The failure rate within each group was 12.1% for GE and 10.2% for UG., Discussion: Our study found that GE students were overrepresented in the high-achieving groups when compared to UG students. GE students were significantly more likely to be placed in the first or second decile or attain a distinction award. However, GE and UG have a similar failure rate. This study shows that GE programs are a valid entry route to medical courses in the UK.
- Published
- 2017
- Full Text
- View/download PDF
48. Observation of pendular butterfly Rydberg molecules.
- Author
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Niederprüm T, Thomas O, Eichert T, Lippe C, Pérez-Ríos J, Greene CH, and Ott H
- Subjects
- Electricity, Engineering, Light, Magnetics, Models, Statistical, Motion, Photons, Rotation, Spectrophotometry, Vibration, Electrons, Quantum Theory
- Abstract
Engineering molecules with a tunable bond length and defined quantum states lies at the heart of quantum chemistry. The unconventional binding mechanism of Rydberg molecules makes them a promising candidate to implement such tunable molecules. A very peculiar type of Rydberg molecules are the so-called butterfly molecules, which are bound by a shape resonance in the electron-perturber scattering. Here we report the observation of these exotic molecules and employ their exceptional properties to engineer their bond length, vibrational state, angular momentum and orientation in a small electric field. Combining the variable bond length with their giant dipole moment of several hundred Debye, we observe counter-intuitive molecules which locate the average electron position beyond the internuclear distance.
- Published
- 2016
- Full Text
- View/download PDF
49. Rydberg Molecule-Induced Remote Spin Flips.
- Author
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Niederprüm T, Thomas O, Eichert T, and Ott H
- Abstract
We have performed high resolution photoassociation spectroscopy of rubidium ultralong-range Rydberg molecules in the vicinity of the 25P state. Because of the hyperfine interaction in the ground state perturber atom, the emerging mixed singlet-triplet potentials contain contributions from both hyperfine states. We show that this can be used to induce remote spin flips in the perturber atom upon excitation of a Rydberg molecule. Furthermore, when the spin-orbit splitting of the Rydberg state is comparable to the hyperfine splitting in the ground state, the orbital angular momentum of the Rydberg electron is entangled with the nuclear spin of the perturber atom. Our results open new possibilities for the implementation of spin-dependent interactions for ultracold atoms in bulk systems and in optical lattices.
- Published
- 2016
- Full Text
- View/download PDF
50. Smell no evil: Copper disrupts the alarm chemical response in a diadromous fish, Galaxias maculatus.
- Author
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Thomas OR, Barbee NC, Hassell KL, and Swearer SE
- Subjects
- Animals, Australia, Behavior, Animal drug effects, Dose-Response Relationship, Drug, Odorants analysis, Copper toxicity, Olfactory Perception drug effects, Osmeriformes physiology, Water Pollutants, Chemical toxicity
- Abstract
Fish, at all life stages, utilize olfactory information in the decision-making processes essential to survival. Olfaction is a sensitive sensory process, and toxicants within urban aquatic environments can have destructive or depreciating effects. In the present study, the authors exposed Galaxias maculatus, a native fish commonly found in urban waterways throughout southeastern Australia, to 1 of 5 ecologically relevant copper (II) chloride concentrations (<1 μg/L, 1 μg/L, 6 μg/L, 8 μg/L, 18 μg/L) for 16 h. After exposure, the authors tested the response of individual fish to 1 of 3 stimuli: a conspecific skin extract containing a stress-inducing alarm chemical odor, a conspecific odor, and distilled water as a control. Stress responses were quantified through behavioral assays. The authors found evidence for distinct changes in behavioral response with increasing copper concentration and a marked difference in response between control fish and fish exposed to the alarm chemical odor. Copper, even at relatively low concentrations, can have a significant effect on the stress response behavior shown by G. maculatus. Environ Toxicol Chem 2016;35:2209-2214. © 2016 SETAC., (© 2016 SETAC.)
- Published
- 2016
- Full Text
- View/download PDF
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