138 results on '"Ruan, Ying"'
Search Results
2. Comparative Metabolome and Transcriptome Analysis of Rapeseed ( Brassica napus L.) Cotyledons in Response to Cold Stress.
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Liu X, Wang T, Ruan Y, Xie X, Tan C, Guo Y, Li B, Qu L, Deng L, Li M, and Liu C
- Abstract
Cold stress affects the seed germination and early growth of winter rapeseed, leading to yield losses. We employed transmission electron microscopy, physiological analyses, metabolome profiling, and transcriptome sequencing to understand the effect of cold stress (0 °C, LW) on the cotyledons of cold-tolerant (GX74) and -sensitive (XY15) rapeseeds. The mesophyll cells in cold-treated XY15 were severely damaged compared to slightly damaged cells in GX74. The fructose, glucose, malondialdehyde, and proline contents increased after cold stress in both genotypes; however, GX74 had significantly higher content than XY15. The pyruvic acid content increased after cold stress in GX74, but decreased in XY15. Metabolome analysis detected 590 compounds, of which 32 and 74 were differentially accumulated in GX74 (CK vs. cold stress) and XY15 (CK vs. cold stressed). Arachidonic acid and magnoflorine were the most up-accumulated metabolites in GX74 subjected to cold stress compared to CK. There were 461 and 1481 differentially expressed genes (DEGs) specific to XY15 and GX74 rapeseeds, respectively. Generally, the commonly expressed genes had higher expressions in GX74 compared to XY15 in CK and cold stress conditions. The expression changes in DEGs related to photosynthesis-antenna proteins, chlorophyll biosynthesis, and sugar biosynthesis-related pathways were consistent with the fructose and glucose levels in cotyledons. Compared to XY15, GX74 showed upregulation of a higher number of genes/transcripts related to arachidonic acid, pyruvic acid, arginine and proline biosynthesis, cell wall changes, reactive oxygen species scavenging, cold-responsive pathways, and phytohormone-related pathways. Taken together, our results provide a detailed overview of the cold stress responses in rapeseed cotyledons.
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- 2024
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3. Phosphorus-Solubilizing Bacteria Enhance Cadmium Immobilization and Gene Expression in Wheat Roots to Reduce Cadmium Uptake.
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Kan D, Tian M, Ruan Y, and Han H
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The application of phosphorus-solubilizing bacteria is an effective method for increasing the available phosphorus content and inhibiting wheat uptake of heavy metals. However, further research is needed on the mechanism by which phosphorus-solubilizing bacteria inhibit cadmium (Cd) uptake in wheat roots and its impact on the expression of root-related genes. Here, the effects of strain Klebsiella aerogenes M2 on Cd absorption in wheat and the expression of root-related Cd detoxification and immobilization genes were determined. Compared with the control, strain M2 reduced (64.1-64.6%) Cd uptake by wheat roots. Cd fluorescence staining revealed that strain M2 blocked the entry of exogenous Cd into the root interior and enhanced the immobilization of Cd by cell walls. Forty-seven genes related to Cd detoxification, including genes encoding peroxidase, chalcone synthase, and naringenin 3-dioxygenase, were upregulated in the Cd+M2 treatment. Strain M2 enhanced the Cd resistance and detoxification activity of wheat roots through the regulation of flavonoid biosynthesis and antioxidant enzyme activity. Moreover, strain M2 regulated the expression of genes related to phenylalanine metabolism and the MAPK signaling pathway to enhance Cd immobilization in roots. These results provide a theoretical basis for the use of phosphorus-solubilizing bacteria to remediate Cd-contaminated fields and reduce Cd uptake in wheat.
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- 2024
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4. Frontiers and hotspots in hand, foot, and mouth disease research during 2006 to 2023: A bibliometric and visual analysis.
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Li Y, Ruan Y, Zhai X, Ye J, Xiao Y, Liang J, and Zhu N
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- Humans, Biomedical Research statistics & numerical data, Biomedical Research trends, Bibliometrics, Hand, Foot and Mouth Disease epidemiology
- Abstract
Background: Enteroviruses-infected hand, foot, and mouth disease (HFMD) seriously threatens human health. This study aimed to analyze the research status, hotspots, and frontiers of HFMD., Methods: Publications on HFMD between January 1, 2006, and January 31, 2023, were retrieved from the Web of Science Core database. Bibliometric tools, including CiteSpace, VOSviewer, R package "Bibiometrix," SCImago Graphica, and Charticulator, were utilized to analyze and visualize the data., Results: A total of 1860 articles from 424 journals, involving 8815 authors from 64 countries and 1797 institutions were analyzed. The number of studies on HFMD has shown an increasing trend over the past 18 years, with an annual increase observed since 2006, which is particularly prominent after 2010. Research in this field has centered on the Asian region. Notably, the research hotspots were mainly focused on vaccines, epidemiology, and pathogenesis of HFMD. Among the researchers in this field, Zhang Yong emerged as the most prolific author, while Xu Wenbo had the most significant influence. The Chinese Academy of Sciences was the most productive institution, and China was the most productive country for HFMD research., Conclusion: By bibliometric analysis, researchers in the HMFD field can efficiently identify and visually represent their research focus and limitations. In the future, it is crucial to maintain ongoing surveillance of HFMD outbreaks and their pathogenic changes. Additionally, future research should extensively explore the molecular mechanisms underlying Enteroviruses-induced HFMD with a focus on developing vaccines and therapies., Competing Interests: The authors have no conflicts of interest to disclose., (Copyright © 2024 the Author(s). Published by Wolters Kluwer Health, Inc.)
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- 2024
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5. Genome-Wide Identification of the SPP/SPPL Gene Family and BnaSPPL4 Regulating Male Fertility in Rapeseed ( Brassica napus L.).
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Li G, Zhu W, Tian M, Liu R, Ruan Y, and Liu C
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- Animals, Humans, Male, Aspartic Acid Endopeptidases, Fertility genetics, Peptide Hydrolases, Brassica napus genetics, Brassica rapa, Infertility, Male
- Abstract
Signal peptide peptidase (SPP) and its homologs, signal peptide peptidase-like (SPPL) proteases, are members of the GxGD-type aspartyl protease family, which is widespread in plants and animals and is a class of transmembrane proteins with significant biological functions. SPP/SPPLs have been identified; however, the functions of SPP/SPPL in rapeseed ( Brassica napus L.) have not been reported. In this study, 26 SPP/SPPLs were identified in rapeseed and categorized into three groups: SPP, SPPL2, and SPPL3. These members mainly contained the Peptidase_A22 and PA domains, which were distributed on 17 out of 19 chromosomes. Evolutionary analyses indicated that BnaSPP/SPPLs evolved with a large number of whole-genome duplication (WGD) events and strong purifying selection. Members are widely expressed and play a key role in the growth and development of rapeseed. The regulation of rapeseed pollen fertility by the BnaSPPL4 gene was further validated through experiments based on bioinformatics analysis, concluding that BnaSPPL4 silencing causes male sterility. Cytological observation showed that male infertility caused by loss of BnaSPPL4 gene function occurs late in the mononucleate stage due to microspore dysplasia.
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- 2024
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6. Spontaneous coronary artery rupture after lung cancer surgery: A case report and review of literature.
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Ruan YD and Han JW
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Background: Spontaneous coronary artery rupture (SCAR) is a rare and life-threatening complication after lung cancer surgery. We present a case of SCAR following left upper lobectomy, successfully managed through emergency thoracotomy and coronary artery ligation., Case Summary: A 61-year-old male patient underwent left upper lobectomy and mediastinal lymph node dissection for lung cancer. The surgery was performed using single-port video-assisted thoracoscopic surgery, and there were no observed complications during the procedure. However, 19 h after surgery, the patient experienced chest discomfort and subsequently developed severe symptoms, including nausea, vomiting, and a drop in blood pressure. Urgent measures were taken, leading to the diagnosis of SCAR. The patient underwent emergency thoracotomy and coronary artery ligation, successfully stopping the bleeding and stabilizing the condition. Despite postoperative complications, the patient made a successful recovery and was discharged from the hospital., Conclusion: SCAR is a rare but life-threatening complication following lung cancer surgery. Immediate thoracotomy has been shown to be a life-saving measure, while stenting is not the preferred initial approach., Competing Interests: Conflict-of-interest statement: All authors declare that they have no conflict of interest to disclose., (©The Author(s) 2024. Published by Baishideng Publishing Group Inc. All rights reserved.)
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- 2024
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7. Region-specific protection effect of preoperative oral antibiotics combined with mechanical bowel preparation before laparoscopic colorectal resection: a prospective randomized controlled trial.
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Lei P, Jia G, Yang X, Ruan Y, Wei B, and Chen T
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- Humans, Anti-Bacterial Agents therapeutic use, Colon, Sigmoid, Single-Blind Method, Prospective Studies, Surgical Wound Infection epidemiology, Surgical Wound Infection prevention & control, Surgical Wound Infection etiology, Antibiotic Prophylaxis, Preoperative Care adverse effects, Elective Surgical Procedures adverse effects, Administration, Oral, Colorectal Neoplasms complications, Laparoscopy adverse effects
- Abstract
Background: Oral antibiotics (OA) combined with mechanical bowel preparation (MBP) significantly decrease the rate of surgical site infections (SSIs). However, the prophylactic effects in region-specific colorectal surgery have not been assessed., Materials and Methods: A single-centre, single-blind, randomized controlled trial was conducted from 2019 to 2022. Patients were eligible if they were diagnosed with nonmetastatic colorectal malignancy, and laparoscopic colorectal surgery was indicated. Participants were randomly assigned (1:1) to the experimental (OA+MBP preparation) or control group (MBP preparation). The randomization was further stratified by resected region. The primary outcome was the incidence of SSIs. Patients were followed up for 1 month postoperatively, and all complications were recorded., Result: Between 2019 and 2022, 157 and 152 patients were assigned to the experimental and control groups, respectively, after 51 patients were excluded. The incidence of SSIs in the control group (27/152) was significantly higher than that in the experimental group (13/157; P =0.013), as was the incidence of superficial SSIs (5/157 vs. 14/152, P =0.027) and deep SSIs (7/157 vs. 16/152, P =0.042). After redistribution according to the resected region, the incidence of SSIs was significantly higher in the control group with left-sided colorectal resection (descending, sigmoid colon, and rectum) (9/115 vs. 20/111, P =0.022) but was similar between the groups with right-sided colon resection (ascending colon) (3/37 vs. 7/36, P =0.286). No differences were noted between the groups in terms of other perioperative complications., Conclusion: OA+MBP before colorectal surgery significantly reduced the incidence of SSIs. Such a prophylactic effect was particularly significant for left-sided resection. This preparation mode should be routinely adopted before elective left-region colorectal surgeries., (Copyright © 2023 The Author(s). Published by Wolters Kluwer Health, Inc.)
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- 2023
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8. Two complementary genes in a presence-absence variation contribute to indica-japonica reproductive isolation in rice.
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Wang D, Wang H, Xu X, Wang M, Wang Y, Chen H, Ping F, Zhong H, Mu Z, Xie W, Li X, Feng J, Zhang M, Fan Z, Yang T, Zhao J, Liu B, Ruan Y, Zhang G, Liu C, and Liu Z
- Subjects
- Reproductive Isolation, Alleles, Plant Breeding, Pollen genetics, Oryza genetics
- Abstract
Understanding the evolutionary forces in speciation is a central goal in evolutionary biology. Asian cultivated rice has two subspecies, indica and japonica, but the underlying mechanism of the partial reproductive isolation between them remains obscure. Here we show a presence-absence variation (PAV) at the Se locus functions as an indica-japonica reproductive barrier by causing hybrid sterility (HS) in indica-japonica crosses. The locus comprises two adjacent genes: ORF3 encodes a sporophytic pollen killer, whereas ORF4 protects pollen in a gametophytic manner. In F
1 of indica-japonica crosses, pollen with the japonica haplotype, which lacks the sequence containing the protective ORF4, is aborted due to the pollen-killing effect of ORF3 from indica. Evolutionary analysis suggests ORF3 is a gene associated with the Asian cultivated rice species complex, and the PAV has contributed to the reproductive isolation between the two subspecies of Asian cultivated rice. Our analyses provide perspectives on rice inter-subspecies post-zygotic isolation, and will promote efforts to overcome reproductive barriers in indica-japonica hybrid rice breeding., (© 2023. The Author(s).)- Published
- 2023
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9. Evaporation kinetics during containerless chemical synthesis of ZIF-8 in levitated droplets.
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Zheng Y, Zhuang Q, Ruan Y, and Wei B
- Abstract
Zeolitic imidazolate framework-8 was synthesized in a containerless state via acoustic levitation. The cavitation effect of ultrasound affected the coordination connection of organic ligands in acoustically levitated droplets and they exhibited a conspicuous difference in the particle size distribution as compared with those under normal conditions. Herein, methanol was chosen as the solvent to investigate the influence of droplet evaporation on acoustic levitation synthesis. The kinetic parameters of droplet evaporation such as geometrical morphology transformation, concentration change and temperature evolution were measured for the levitation state. Surface evaporation resulted in the drastic deformation of the droplet during ZIF-8 synthesis and caused its vertical vibration and shape oscillation. The abrupt change of the levitation state aggravated the sound field effect on the containerless synthesis and caused a decrease of particle size distribution. A two-dimensional axis-symmetry model was used to visually simulate the sound field distribution during acoustic levitation synthesis based on the finite element method. The fabricated ZIF-8 was able to remove phthalic acid in wastewater through adsorption, and its kinetic features followed a pseudo second-order rate model.
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- 2023
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10. Full-length transcriptome sequencing and transgenic tobacco revealed the key genes in the chlorogenic acid synthesis pathway of Sambucus chinensis L.
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Chen M, Xiao M, Liu B, Wang M, Tan C, Zhang Y, Quan H, Ruan Y, and Huang Y
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- Nicotiana genetics, Nicotiana metabolism, Plant Leaves metabolism, Biosynthetic Pathways, Gene Expression Profiling, Transcriptome, Chlorogenic Acid analysis, Chlorogenic Acid chemistry, Chlorogenic Acid metabolism
- Abstract
Chlorogenic acid is a key chemical in antioxidation and antisepsis. Sambucus chinensis L. is an herbaceous plant rich in chlorogenic acid and a potential genetic resource for breeding high-chlorogenic acid plants. However, there are few studies on the synthesis pathway of chlorogenic acid in S. chinensis. Our study found chlorogenic acid accumulation in S. chinensis to be organ-specific, higher in leaves and buds but lower in roots, stems and fruits. A total number of 546,844 CCS (circular consensus sequence), including 402,767 full-length nonchimeric (FLNC) and 39 annotated sequences related to the synthesis of chlorogenic acid, was obtained by single-molecule real-time sequencing technology (SMRT). qRT-PCR showed that a number of key genes involved in chlorogenic acid synthesis were differentially expressed in various tissues of S. chinensis. Transgenic tobacco revealed that ectopic expression of the HCT homologous gene HCT-45178 increased the content of chlorogenic acid. Our results should be the first report of full-length transcriptome data of S. chinensis, which help to understand the basis of chlorogenic acid synthesis and provide a novel strategy for breeding tobacco cultivars with higher levels of chlorogenic acid., (© 2023 Scandinavian Plant Physiology Society.)
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- 2023
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11. SDG26 Is Involved in Trichome Control in Arabidopsis thaliana : Affecting Phytohormones and Adjusting Accumulation of H3K27me3 on Genes Related to Trichome Growth and Development.
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Zeng J, Yang L, Tian M, Xie X, Liu C, and Ruan Y
- Abstract
Plant trichomes formed by specialized epidermal cells play a role in protecting plants from biotic and abiotic stresses and can also influence the economic and ornamental value of plant products. Therefore, further studies on the molecular mechanisms of plant trichome growth and development are important for understanding trichome formation and agricultural production. SET Domain Group 26 (SDG26) is a histone lysine methyltransferase. Currently, the molecular mechanism by which SDG26 regulates the growth and development of Arabidopsis leaf trichomes is still unclear. We found that the mutant of Arabidopsis ( sdg26 ) possessed more trichomes on its rosette leaves compared to the wild type (Col-0), and the trichome density per unit area of sdg26 is significantly higher than that of Col-0. The content of cytokinins and jasmonic acid was higher in sdg26 than in Col-0, while the content of salicylic acid was lower in sdg26 than in Col-0, which is conducive to trichome growth. By measuring the expression levels of trichome-related genes, we found that the expression of genes that positively regulate trichome growth and development were up-regulated, while the negatively regulated genes were down-regulated in sdg26 . Through chromatin immunoprecipitation sequencing (ChIP-seq) analysis, we found that SDG26 can directly regulate the expression of genes related to trichome growth and development such as ZFP1 , ZFP5 , ZFP6 , GL3 , MYB23 , MYC1 , TT8 , GL1 , GIS2 , IPT1 , IPT3 , and IPT5 by increasing the accumulation of H3K27me3 on these genes, which further affects the growth and development of trichomes. This study reveals the mechanism by which SDG26 affects the growth and development of trichomes through histone methylation. The current study provides a theoretical basis for studying the molecular mechanism of histone methylation in regulating leaf trichome growth and development and perhaps guiding the development of new crop varieties.
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- 2023
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12. MSC-derived extracellular vesicles as nanotherapeutics for promoting aged liver regeneration.
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Zhang J, Lu T, Xiao J, Du C, Chen H, Li R, Sui X, Pan Z, Xiao C, Zhao X, Yao J, Liu Y, Lei Y, Ruan Y, Zhang J, Li H, Zhang Q, Zhang Y, Cai J, Yang Y, and Zheng J
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- Aged, Humans, Mice, Animals, Liver Regeneration, Hepatocytes metabolism, DEAD-box RNA Helicases metabolism, Liver Diseases, Extracellular Vesicles metabolism
- Abstract
Aging is one of the critical factors to impair liver regeneration leading to a high incidence of severe complications after hepatic surgery in the elderly population without any effective treatment for clinical administration. As cell-free nanotherapeutics, mesenchymal stem cell-derived extracellular vesicles (MSC-EVs) have been demonstrated the therapeutic potentials on liver diseases. However, the effects of MSC-EVs on the proliferation of aged hepatocytes are largely unclear. In this study, we found MSCs could reduce the expression of senescence-associated markers in the liver and stimulate its regeneration in aged mice after receiving a two-thirds partial hepatectomy (PHx) through their secreted MSC-EVs. Using RNA-Seq and AAV9 vector, we mechanistically found that these effects of UC-MSC-EVs partially attributed to inducing Atg4B-related mitophagy. This effect repairs the mitochondrial status and functions of aged hepatocytes to promote their proliferation. And protein mass spectrum analysis uncovered that DEAD-Box Helicase 5 (DDX5) enriches in UC-MSC-EVs, which interacts with E2F1 to facilitate its nuclear translocation for activating the expression of Atg4B. Collectively, our data show that MSC-EVs act nanotherapeutic potentials in anti-senescence and promoting regeneration of aged liver by transferring DDX5 to regulate E2F1-Atg4B signaling pathway that induce mitophagy, which highlights the clinical application valuation of MSC-EVs for preventing severe complications in aged population receiving liver surgery., Competing Interests: Declaration of Competing Interest All authors declare that they do not have anything to disclose regarding funding or conflict of interest., (Copyright © 2023. Published by Elsevier B.V.)
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- 2023
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13. Unraveling the Structure Transition and Peroxidase Mimic Activity of Copper Sites over Atomically Dispersed Copper-Doped Carbonized Polymer Dots.
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Gao F, Huang J, Ruan Y, Li H, Gong P, Wang F, Tang Q, and Jiang Y
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The lack of systematic structural resolution makes it difficult to build specific transition-metal-atom-doped carbonized polymer dots (TMA-doped CPDs). Herein, the structure-activity relationship between Cu atoms and CPDs was evaluated by studying the peroxidase-like properties of Glu-Cu-CPDs prepared by using copper glutamate (Glu) with a Cu-N
2 O2 initial structure. The results showed that the Cu atoms bound to Glu-Cu-CPDs in the form of Cu-N2 C2 , indicating that Cu-O bonds changed into Cu-C bonds under hydrothermal conditions. This phenomenon was also observed in other copper-doped CPDs. Moreover, the carboxyl and amino groups content decreased after copper-atom doping. Theoretical calculations revealed a dual-site catalytic mechanism for catalyzing H2 O2 . The detection of intracellular H2 O2 suggested their application prospects. Our study provides an in-depth understanding of the formation and catalytic mechanism of TMA-doped-CPDs, allowing for the generation specific TMA-doped-CPDs., (© 2022 Wiley-VCH GmbH.)- Published
- 2023
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14. Achieving of high-diet-fiber barley via managing fructan hydrolysis.
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Fei M, Jin Y, Hu J, Dotsenko G, Ruan Y, Liu C, Seisenbaeva G, Andersson AAM, Andersson R, and Sun C
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- Fructans, Hydrolysis, Plant Breeding, Dietary Fiber, Edible Grain, Diet, Hordeum
- Abstract
High fructan content in the grain of cereals is an important trait in agriculture such as environmental resilience and dietary fiber food production. To understand the mechanism in determining final grain fructan content and achieve high fructan cereal, a cross breeding strategy based on fructan synthesis and hydrolysis activities was set up and have achieved barley lines with 11.8% storage fructan in the harvested grain. Our study discovered that high activity of fructan hydrolysis at later grain developmental stage leads to the low fructan content in mature seeds, simultaneously increasing fructan synthesis at early stage and decreasing fructan hydrolysis at later stage through crossing breeding is an efficient way to elevate grain diet-fiber content. A good correlation between fructan and beta glucans was also discovered with obvious interest. Field trials showed that the achieved high fructan barley produced over seven folds higher fructan content than control barley and pull carbon-flux to fructan through decreasing fructan hydrolysis without disruption starch synthesis will probably not bring yield deficiency., (© 2022. The Author(s).)
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- 2022
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15. Combined Transcriptome and Metabolome Profiling Provide Insights into Cold Responses in Rapeseed ( Brassica napus L.) Genotypes with Contrasting Cold-Stress Sensitivity.
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Liu X, Wei R, Tian M, Liu J, Ruan Y, Sun C, and Liu C
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- Cold-Shock Response genetics, Transcriptome, Gene Expression Regulation, Plant, Gene Expression Profiling methods, Genotype, Metabolome, Sugars, Brassica napus genetics, Brassica rapa genetics
- Abstract
Low temperature is a major environmental factor, which limits rapeseed ( Brassica napus L.) growth, development, and productivity. So far, the physiological and molecular mechanisms of rapeseed responses to cold stress are not fully understood. Here, we explored the transcriptome and metabolome profiles of two rapeseed genotypes with contrasting cold responses, i.e., XY15 (cold-sensitive) and GX74 (cold-tolerant). The global metabolome profiling detected 545 metabolites in siliques of both genotypes before (CK) and after cold-stress treatment (LW). The contents of several sugar metabolites were affected by cold stress with the most accumulated saccharides being 3-dehydro-L-threonic acid, D-xylonic acid, inositol, D-mannose, D-fructose, D-glucose, and L-glucose. A total of 1943 and 5239 differentially expressed genes were identified from the transcriptome sequencing in XY15CK_vs_XY15LW and GX74CK_vs_GX74LW, respectively. We observed that genes enriched in sugar metabolism and biosynthesis-related pathways, photosynthesis, reactive oxygen species scavenging, phytohormone, and MAPK signaling were highly expressed in GX74LW. In addition, several genes associated with cold-tolerance-related pathways, e.g., the CBF-COR pathway and MAPK signaling, were specifically expressed in GX74LW. Contrarily, genes in the above-mentioned pathways were mostly downregulated in XY15LW. Thus, our results indicate the involvement of these pathways in the differential cold-stress responses in XY15 and GX74.
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- 2022
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16. Application of Immersive Virtual Reality Interactive Technology in Art Design Teaching.
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Ruan Y
- Subjects
- Computer Simulation, Humans, Learning, Technology, Virtual Reality
- Abstract
With the rapid development of economy and society, the integration of disciplines has become a key object faced by the whole society. The new characteristics of rapidly iterative technology and evolving theory of the digital age brought new challenges, especially for art and design teaching. At the same time, with the continuous progress of computer hardware level, all kinds of simulation technology constantly emerge, which also brought new opportunities for art design work. Art design teaching, as a systematic project, should use advanced teaching techniques with scientific theories. In the process of teaching design, how are all parts connected with each other, and what are the problems and needs of students and teachers? Through the analysis and research of these, we are aimed at finding ways and methods to solve these problems and needs, and to achieve the optimal teaching effect. The mode, technology, and methods of traditional art design teaching are getting more and more difficult to meet the needs of the society for comprehensive design art talents. Based on virtual reality technology and aimed at the art design teaching system, this paper studies the application of the immersive virtual reality technology in the design teaching practice. On the basis of the traditional design teaching mode, the integrated three-dimensional design teaching mode is put forward and verified. It can inspire students' creative inspiration in design teaching and guide them to immerse in learning and three-dimensional practice, constantly opening up creative thinking., Competing Interests: The author declares that there are no conflicts of interest to report regarding the present study., (Copyright © 2022 Ying Ruan.)
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- 2022
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17. Hilbert-Coding Metasurface for Diverse Electromagnetic Controls.
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Hao J, Ye F, Ruan Y, Chen L, and Cui H
- Abstract
Metamaterials, or metasurfaces, allow the flexible and efficient manipulation of electromagnetic (EM) wave. Although the passive coding metasurfaces have achieved a great deal of functionality, they also need a complex design process. In this paper, we propose Hilbert-coding metasurfaces for flexible and convenient EM regulation by arranging Hilbert-coding metamaterial units of different orders. To demonstrate this behavior, we designed 12 metasurfaces, then fabricated and measured 6 samples. Validation results on 6 Hilbert-coding metasurfaces show the deflection angles of the four single beam patterns obtained are about 21°, 13°, 12°, and 39°, with energy values of 7.75 dB, 7.3 dB, 7.2 dB, and 7.7 dB, respectively, and the deflection angles of the dual-beam patterns are 28.5° and 20° with energy values of 10.05 dB and 11.4 dB, respectively. The results are quite consistent with the simulation data, further confirming the feasibility of our idea. In addition, there are potential applications in Wireless Communications and Radar-imaging, like EM beam scanning and EM field energy distribution control in communication and imaging scenarios.
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- 2022
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18. [Temporal variation and influencing factors of albedo in a deciduous broad-leaved forest].
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Ruan Y, Wang CK, Liu F, and Wang XC
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- Plant Leaves, Seasons, Sunlight, Ecosystem, Forests
- Abstract
In situ measurement of albedo is important for estimating ecosystem energy budget and its remote sensing application. However, the measurement method of albedo on sloping land is limited and the difference in temporal variation in albedo between visible and near-infrared bands remains unclear. Taking a deciduous broad-leaved forest at the Maoershan Forest Ecological Station in Northeast China as an example, we explored the temporal variation and influencing factors of albedo for three bands: incident and reflected solar radiation (SR, 300-2800 nm), photosynthetically active radiation (PAR, 400-700 nm), and near infrared radiation (NIR, 700-2800 nm). The temporal difference in albedo measurements between the two installation methods of radiometers was analyzed. The results showed that, in sunny days, the diurnal variation in SR and NIR albedo had an asymmetric U-shaped curve around the local noon, while PAR increased from sunrise to sunset. In cloudy days, the albedo decreased sharply and then tended to be stable. The measurement with parallel sensors to the slope increased the daily mean value of albedo, but reduced the daily asymmetry of SR and NIR. For the whole growing season, the maximum albedos of SR, NIR and PAR in horizontal measurement were 0.16, 0.27 and 0.11, respectively, and the minimums were 0.07, 0.11 and 0.03, respectively. Albedo in the SR and NIR wavebands increased first and then decreased (the peak value was in July), while PAR showed a contrasting pattern. SR albedo was mainly controlled by NIR rather than PAR. The contribution of the influencing factors was ranked in the order of normalized difference vegetation index (61.7%-78.5%, representing leaf area index) > solar altitude angle (15.4%-36.9%) > clearness index (0.4%-36.9%).
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- 2022
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19. One-step emulsification for controllable preparation of ethyl cellulose microcapsules and their sustained release performance.
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Song XC, Yu YL, Yang GY, Jiang AL, Ruan YJ, and Fan SH
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- Capsules chemistry, Cellulose analogs & derivatives, Delayed-Action Preparations, Emulsions chemistry, Particle Size, Water chemistry, Curcumin
- Abstract
A simple and versatile strategy for controlled production of monodisperse ethyl cellulose (EC) microcapsules by a single-stage emulsification method has been developed. Monodisperse oil-in-water emulsions, obtained by a microfluidic device, are used as templates for preparing EC microcapsules. Oil-soluble ethyl acetate (EA) is miscible with water, so the interfacial mass transfer between EA and water occurs sufficiently, which leads to water molecules pass through the phase interface and diffuse into emulsion interior. Water molecules aggregate at the interface, and some merge into a large water drop in the central position of the emulsion. After evaporation of EA solvent, monodisperse EC microcapsules create large numbers of pits on the surface with a hollow structure. Curcumin is used as a model drug and embedded in the hollow structure. EC microcapsules have good, sustained drug release efficacy in a simulated intestinal environment, and the release process of EC microcapsules containing 6.14% drug-loaded capacity is fully consistent with the vitro drug release model. Such simple techniques for making EC microcapsules may open a window to the controlled preparation of other multifunctional microcapsules. Besides, it offers theoretical guidance for the study of EC microcapsules as drug carriers and expanding clinical application of curcumin., (Copyright © 2022 Elsevier B.V. All rights reserved.)
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- 2022
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20. Floating synthesis with enhanced catalytic performance via acoustic levitation processing.
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Zheng Y, Zhuang Q, Ruan Y, Zhu G, Xie W, Jiang Y, Li H, and Wei B
- Subjects
- Acoustics, Catalysis, Crystallization, Gold chemistry, Metal Nanoparticles chemistry
- Abstract
Acoustic levitation supplies a containerless state to eliminate natural convection and heterogeneous crystal nucleation and thus provides a highly uniform and ultra clean condition in the confined levitating area. Herein, we attempt to make full use of these advantages to fabricate well dispersed metal nanoparticles. The gold nanoparticles, synthesized in an acoustically levitated droplet, exhibited a smaller size and improved catalytic performance in 4-nitrophenol reduction were synthesized in an acoustically levitated droplet. The sound field was simulated to understand the impact of acoustic levitation on gold nanoparticle growth with the aid of crystal growth theory. Chemical reducing reactions in the acoustic levitated space trend to occur in a better dispersed state because the sound field supplies continuous vibration energy. The bubble movement and the cavitation effect accelerate the nucleation, decrease the size, and the internal flow inside levitated droplet probably inhibit the particle fusion in the growth stage. These factors lead to a reduction in particle size compared with the normal wet chemical synthetic condition. The resultant higher surface area and more numerous active catalytic sites contribute to the improvement of the catalytic performance., (Copyright © 2022 The Author(s). Published by Elsevier B.V. All rights reserved.)
- Published
- 2022
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21. Ultraviolet-sensing metasurface for programmable electromagnetic scattering field manipulation by combining light control with a microwave field.
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Chen L, Ye FJ, Cuo M, Luo SS, Hao JJ, Ruan Y, and Cui HY
- Abstract
Combining digital information science with metasurface technology is critical for achieving arbitrary electromagnetic wave manipulation. However, there is a scarcity of contemporary scholarly studies on this subject. In this paper, we propose an Ultraviolet (UV) sensing metasurface for programmable electromagnetic scattering field manipulation by combining light control with a microwave field. The active sensing of UV light and the real-time reaction of the scattering are achieved by integrating four UV sensors on the metasurface. On the metasurface, a UV sensor ML8511 and a voltage driver module are coupled to control each row of the Positive-Intrinsic-Negative (PIN) diodes. Due to the light sensing capability of the UV sensor, the on or off state of the PIN diode integrated into the programmable metasurface can be switched efficiently through the change of light. When the incident wave changes, various discrete data are transmitted to the FPGA. Then the FPGA performs the corresponding voltage distribution to control the state of the PIN diode. Finally, different metasurface coding sequences are generated to realize different electromagnetic functions. As a result, the spatial distribution of sensing light by sensors can be used to determine the electromagnetic field and connect sensing optical information with the microwave field. The simulation and measured results show that this design is feasible. This work provides a dimension for electromagnetic waves modulation.
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- 2022
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22. Metformin: A promising drug for human cancers.
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Wu H, Huang D, Zhou H, Sima X, Wu Z, Sun Y, Wang L, Ruan Y, Wu Q, Wu F, She T, Chu Y, Huang Q, Ning Z, and Zhang H
- Abstract
Small-molecule chemical drugs are of great significance for tumor-targeted and individualized therapies. However, the development of new small-molecule drugs, from basic experimental research and clinical trials to final application in clinical practice, is a long process that has a high cost. It takes at least 5 years for most drugs to be developed in the laboratory to prove their effectiveness and safety. Compared with the development of new drugs, repurposing traditional non-tumor drugs can be a shortcut. Metformin is a good model for a new use of an old drug. In recent years, the antitumor efficacy of metformin has attracted much attention. Epidemiological data and in vivo , and in vitro experiments have shown that metformin can reduce the incidence of cancer in patients with diabetes and has a strong antagonistic effect on metabolism-related tumors. Recent studies have shown that metformin can induce autophagy in esophageal cancer cells, mainly by inhibiting inflammatory signaling pathways. In recent years, studies have shown that the antitumor functions and mechanisms of metformin are multifaceted. The present study aims to review the application of metformin in tumor prevention and treatment., Competing Interests: The authors declare that they have no competing interests., (Copyright: © Wu et al.)
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- 2022
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23. Identification and charactering of APX genes provide new insights in abiotic stresses response in Brassica napus .
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Pan J, Zhang L, Chen M, Ruan Y, Li P, Guo Z, Liu B, Ruan Y, Xiao M, and Huang Y
- Subjects
- Ascorbate Peroxidases genetics, Phylogeny, Hydrogen Peroxide, Stress, Physiological genetics, Brassica napus genetics
- Abstract
Ascorbate peroxidase (APX) plays an important role in scavenging H
2 O2 and balancing ROS content in plant cells, which is of great significance for the growth and development of life and resistance to external stress. However, up to now, APXs in Brassica napus ( B. napus ) have not been systematically characterized. In this study, a total of 26 BnaAPX genes were identified, which were distributed on 13 chromosomes and divided into five phylogenetic branches. Gene structure analysis showed that they had a wide varied number of exons while BnaAPXs proteins contained more similar motifs in the same phylogenetic branches. qRT-PCR analysis of 26 BnaAPX gene expression patterns showed that three putative cytosol BnaAPX genes BnaAPX1 , BnaAPX2 , BnaAPX9 , two putatice microsomal genes BnaAPX18 and BnaAPX25 were up-regulated rapidly and robustly under high salt, water shortage and high temperature stresses. In addition, the above three abiotic stresses led to a significant increase in APX activity. The results provide basic and comprehensive information for further functional characterization of APX gene family in B. napus ., Competing Interests: The authors declare there are no competing interests., (©2022 Pan et al.)- Published
- 2022
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24. Chloroplast genome structure and phylogenetic position of Syringodium isoetifolium (Asch.) Dandy.
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Ruan YG, Yu S, Shun-Hua Z, and Yin QJ
- Abstract
Syringodium isoetifolium (noodle seagrass) is a dioecious perennial seagrass. In this study, the complete chloroplast genome of S. isoetifolium was successfully characterized through next-generation sequencing technology. The cp genome was 159,333 bp in length with a GC content of 35.9%, including LSC (89,055 bp), SSC (19,160 bp), and two IRs (25,559 bp). The genome encoded 131 function genes, including 86 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic analysis indicated that S. isoetifolium was clustered with Zostera and Ruppia ., Competing Interests: No potential conflict of interest was reported by the author(s)., (© 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.)
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- 2022
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25. One-step fabrication of soft calcium superhydrophobic surfaces by a simple electrodeposition process.
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Chen Z, Hu Y, He X, Xu Y, Liu X, Zhou Y, Hao L, and Ruan Y
- Abstract
A simple, one-step electrodeposition process was rapidly performed on a metal substrate to fabricate calcium superhydrophobic surfaces in an electrolyte containing calcium chloride (CaCl
2 ), myristic acid (CH3 (CH2 )12 COOH), and ethanol, which can avoid the intricate post-processing of surface treatment. The morphology and surface chemical compositions of the fabricated superhydrophobic surfaces were systematically examined by means of SEM, XRD, and FTIR, respectively. The results indicate that the deposited surfaces were mainly composed of calcium myristate, which can dramatically lower surface free energy. The shortest process for constructing a superhydrophobic surface is about 0.5 min, and the maximum contact angle of the as-prepared surfaces can reach as high as 166°, showing excellent superhydrophobicity. By adjusting the electrodeposition time, the structure of the cathodic surface transforms from the turfgrass structure, loose flower structures, larger and dense flower structures, secondary flower structures, and then into tertiary or more flower structures. The superhydrophobic surfaces showed excellent rebound performance with a high-speed camera. After a pressing force, their hardness increases, but the superhydrophobic performance is not weakened. Inversely, the bouncing performance is enhanced. This electrodeposition process offers a promising approach for large areas of superhydrophobic surfaces on conductive metals and strongly impacts the dynamics of water droplets., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (This journal is © The Royal Society of Chemistry.)- Published
- 2021
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26. Systematic analysis of CCCH zinc finger family in Brassica napus showed that BnRR-TZFs are involved in stress resistance.
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Pi B, Pan J, Xiao M, Hu X, Zhang L, Chen M, Liu B, Ruan Y, and Huang Y
- Subjects
- Chromosome Mapping, Crops, Agricultural genetics, Gene Expression Regulation, Plant, Genotype, Multigene Family, Adaptation, Physiological genetics, Brassica napus genetics, Brassica rapa genetics, Genes, Plant, Genetic Variation, Stress, Physiological, Zinc Fingers genetics
- Abstract
Background: CCCH zinc finger family is one of the largest transcription factor families related to multiple biotic and abiotic stresses. Brassica napus L., an allotetraploid oilseed crop formed by natural hybridization between two diploid progenitors, Brassica rapa and Brassica oleracea. A systematic identification of rapeseed CCCH family genes is missing and their functional characterization is still in infancy., Results: In this study, 155 CCCH genes, 81 from its parent B. rapa and 74 from B. oleracea, were identified and divided into 15 subfamilies in B. napus. Organization and syntenic analysis explained the distribution and collinearity relationship of CCCH genes, the selection pressure and evolution of duplication gene pairs in B. napus genome. 44 diploid duplication gene pairs and 4 triple duplication gene groups were found in B. napus of CCCH family and the segmental duplication is attributed to most CCCH gene duplication events in B. napus. Nine types of CCCH motifs exist in B. napus CCCH family members, and motif C-X
7/8 -C-X5 -C-X3 -H is the most common and a new conserved CCH motif (C-X5 -C-X3 -H) has been identified. In addition, abundant stress-related cis-elements exist in promoters of 27 subfamily IX (RR-TZF) genes and their expression profiles indicated that RR-TZF genes could be involved in responses to hormone and abiotic stress., Conclusions: The results provided a foundation to understand the basic characterization and genes evolution of CCCH gene family in B. napus, and provided potential targets for genetic engineering in Brassicaceae crops in pursuit of stress-tolerant traits., (© 2021. The Author(s).)- Published
- 2021
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27. Recent advances in the contribution of circRNAs to cisplatin chemotherapy resistance in cancers.
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Mu C, Wang XL, Ruan Y, Sun JJ, Hu XR, and Cheng Y
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- Cisplatin, Humans, MicroRNAs genetics, Antineoplastic Agents therapeutic use, Drug Resistance, Neoplasm genetics, Neoplasms drug therapy, Neoplasms genetics, RNA, Circular genetics
- Abstract
Worldwide, cancer is a serious threat to the health of citizens of every country, with the incidence and mortality increasing year by year. Cisplatin is the first-line anticancer drug commonly used in clinics and is widely used for the treatment of solid tumors including lung, gastric, liver, bladder, and ovarian cancer. Although cisplatin-based chemotherapy has a high clinical response efficacy, patients will inevitably develop drug resistance after repeated use, leading to severe restrictions of its application. Circular RNAs (circRNAs) are a promising class of non-coding RNAs capable of promoting or suppressing cancer via functioning as miRNAs sponges. Recently, an increasing amount of evidence shows that circRNAs are closely related to the cisplatin resistance of cancers. Therefore, standing at the perspective of the cisplatin chemotherapy resistance, this paper reviews the research progress of circRNAs related to cisplatin resistance of various cancers.
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- 2021
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28. Evolution of the Electromagnetic Manipulation: From Tunable to Programmable and Intelligent Metasurfaces.
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Luo S, Hao J, Ye F, Li J, Ruan Y, Cui H, Liu W, and Chen L
- Abstract
Looking back on the development of metamaterials in the past 20 years, metamaterials have gradually developed from three-dimensional complex electromagnetic structures to a two-dimensional metasurface with a low profile, during which a series of subversive achievements have been produced. The form of electromagnetic manipulation of the metasurface has evolved from passive to active tunable, programmable, and other dynamic and real-time controllable forms. In particular, the proposal of coding and programmable metasurfaces endows metasurfaces with new vitality. By describing metamaterials through binary code, the digital world and the physical world are connected, and the research of metasurfaces also steps into a new era of digitalization. However, the function switch of traditional programmable metamaterials cannot be achieved without human instruction and control. In order to achieve richer and more flexible function regulation and even higher level metasurface design, the intelligence of metamaterials is an important direction in its future development. In this paper, we review the development of tunable, programmable, and intelligent metasurfaces over the past 5 years, focusing on basic concepts, working principles, design methods, manufacturing, and experimental validation. Firstly, several manipulation modes of tunable metasurfaces are discussed; in particular, the metasurfaces based on temperature control, mechanical control, and electrical control are described in detail. It is demonstrated that the amplitude and phase responses can be flexibly manipulated by the tunable metasurfaces. Then, the concept, working principle, and design method of digital coding metasurfaces are briefly introduced. At the same time, we introduce the active programmable metasurfaces from the following aspects, such as structure, coding method, and three-dimensional far-field results, to show the excellent electromagnetic manipulation ability of programmable metasurfaces. Finally, the basic concepts and research status of intelligent metasurfaces are discussed in detail. Different from the previous programmable metamaterials, which must be controlled by human intervention, the new intelligent metamaterials control system will realize autonomous perception, autonomous decision-making, and even adaptive functional manipulation to a certain extent.
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- 2021
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29. Modeling of Wetting Transition of Liquid Metals on Organic Liquid Surfaces.
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Ni E, Li T, Ruan Y, Ma Y, Wang Y, Jiang Y, and Li H
- Abstract
Wettability of liquid metal gallium is of vital significance in the field of modern industries, such as direct writing printing and microfluidics. A liquid interface is a recently developed and promising approach to regulate wettability but has not been well applied in liquid metals yet. This study focuses on the wetting performance of gallium droplets on organic liquid films. The results show that the organic liquid film could change the wetting state of the gallium droplet. Based on the solid substrate roughness and surface tension of the organic liquid, we could estimate whether the gallium droplet is in a slippery Wenzel or a Cassie state. Subsequently, we apply the thermodynamic stable model on different organic liquid films by spreading parameters to predict a priori whether an arbitrary combination of solid roughness and organic liquid is suitable for designing lubricant-infused surfaces (LIS) used in gallium droplets. More interestingly, we found that the "cloaking" could delay surface oxide formation, which will benefit the manipulation of liquid metal droplets. This paper would provide a better understanding of wettability of liquid metal on an organic liquid surface.
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- 2021
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30. Resveratrol Relieves Hyperoxia-Induced Brain Injury in Neonatal Rats by Activating Sirt1.
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Kang L, Dong W, Li X, Ruan Y, and Zhang R
- Subjects
- Animals, Animals, Newborn, Apoptosis drug effects, Brain metabolism, Brain Injuries metabolism, Rats, Rats, Sprague-Dawley, Tumor Suppressor Protein p53 metabolism, Brain Injuries drug therapy, Brain Injuries pathology, Hyperoxia complications, Resveratrol pharmacology, Sirtuin 1 metabolism
- Abstract
Objective: Neonatal rats with hyperoxia-induced brain injury were treated with resveratrol to investigate its protective effects through analyzing changes in reactive oxygen species (ROS), Sirt1, p53, and acetylated p53 levels., Study Design: Neonatal rats were randomly divided into hyperoxia and resveratrol intervened groups. Rats in both groups were placed in a hyperoxia chamber for 7 days to induce hyperoxia-induced brain injury. The rats in the resveratrol intervened group were administered resveratrol 60 μg/g body weight daily, whereas those in the hyperoxia group were administered a dimethyl sulfoxide-based solvent. Brain tissues were collected, and hematoxylin and eosin (H&E) and TUNEL staining, ROS measurements, real time-polymerase chain reaction, and western blotting were performed., Results: H&E and TUNEL staining revealed increased cell damage and apoptosis in brain tissue from hyperoxia-exposed animals compared with the findings in animals in the resveratrol intervened group. Real time-polymerase chain reaction and western blotting identified increases in Sirt1 expression and decreases in p53 expression in the resveratrol intervened group. In addition, acetylated p53 protein expression was lower in the intervened group than in the hyperoxia group., Conclusion: Resveratrol alleviated brain apoptosis induced by hyperoxia in neonatal rats by upregulating Sirt1-mediated pathways, suggesting its potentially beneficial role in the treatment of brain injury induced by hyperoxia., Competing Interests: None declared., (Thieme. All rights reserved.)
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- 2021
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31. Heat shock preconditioning mesenchymal stem cells attenuate acute lung injury via reducing NLRP3 inflammasome activation in macrophages.
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Lv H, Yuan X, Zhang J, Lu T, Yao J, Zheng J, Cai J, Xiao J, Chen H, Xie S, Ruan Y, An Y, Sui X, and Yi H
- Subjects
- Animals, Heat-Shock Response, Inflammasomes, Lung, Macrophages, Mice, Mice, Inbred C57BL, NLR Family, Pyrin Domain-Containing 3 Protein genetics, Acute Lung Injury therapy, Mesenchymal Stem Cells
- Abstract
Objectives: Acute lung injury (ALI) remains a common cause of morbidity and mortality worldwide, and to date, there is no effective treatment for ALI. Previous studies have revealed that topical administration of mesenchymal stem cells (MSCs) can attenuate the pathological changes in experimental acute lung injury. Heat shock (HS) pretreatment has been identified as a method to enhance the survival and function of cells. The present study aimed to assess whether HS-pretreated MSCs could enhance immunomodulation and recovery from ALI., Materials and Methods: HS pretreatment was performed at 42 °C for 1 h, and changes in biological characteristics and secretion functions were detected. In an in vivo mouse model of ALI, we intranasally administered pretreated umbilical cord-derived MSCs (UC-MSCs), confirmed their therapeutic effects, and detected the phenotypes of the macrophages in bronchoalveolar lavage fluid (BALF). To elucidate the underlying mechanisms, we cocultured pretreated UC-MSCs with macrophages in vitro, and the expression levels of inflammasome-related proteins in the macrophages were assessed., Results: The data showed that UC-MSCs did not exhibit significant changes in viability or biological characteristics after HS pretreatment. The administration of HS-pretreated UC-MSCs to the ALI model improved the pathological changes and lung damage-related indexes, reduced the proinflammatory cytokine levels, and modulated the M1/M2 macrophage balance. Mechanistically, both the in vivo and in vitro studies demonstrated that HS pretreatment enhanced the protein level of HSP70 in UC-MSCs, which negatively modulated NLR family pyrin domain containing 3 (NLRP3) inflammasome activation in alveolar macrophages. These effects were partially reversed by knocking down HSP70 expression., Conclusion: HS pretreatment can enhance the beneficial effects of UC-MSCs in inhibiting NLRP3 inflammasome activation in macrophages during ALI. The mechanism may be related to the upregulated expression of HSP70.
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- 2021
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32. Measurements of cardiac efficiency and internal work of the left ventricle via reconstructed impedance cardiography.
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Kuang SJ, Xiao QJ, Kuang MX, Zhao H, Li B, Dong LQ, and Ruan YL
- Subjects
- Adult, Cardiac Output, Cardiography, Impedance, Female, Heart Ventricles diagnostic imaging, Humans, Male, Heart Failure, Hypertension
- Abstract
Objective . The aim of this study was to investigate methods for measuring the cardiac efficiency (CE) and internal work (IW) of the left ventricle via reconstructed impedance cardiography (RICG). Approach. On the basis of the physiological context and Bernoulli's equation in physics, methods of measuring the CE and IW were proposed. The CE, IW, internal work index (IWI), and other data from 180 healthy adults and 144 patients with cardiovascular disease were measured. Main results . The CE of 180 healthy adults was 22.5 ± 2.2%, and the IWI was 22.3 ± 5.2 J l
-1 m-2 . CE decreased with age, and the CE of the younger group (23.5 ± 1.9%) was larger than that of the older group (21.5 ± 1.9%), P < 0.01. The IWI increased with age, and the IWI of the younger group (19.0 ± 3.8 J l-1 m-2 ) was smaller than that of the older group (24.8 ± 4.3 J l-1 m-2 ), P < 0.01. There were no significant difference in CE (22.4 ± 2.2% and 22.6 ± 2.2%) or in the IWI (21.9 ± 5.1 J l-1 m-2 and 22.6 ± 5.2 J l-1 m-2 ) between the male and female groups. The CEs and IWIs of patients with hypertension, coronary heart disease, and heart failure were 17.4 ± 2.4% and 41.8 ± 15.6 J l-1 m-2 , 17.6 ± 3.0% and 35.1 ± 10.4 J l-1 m-2 , and 15.8 ± 3.5% and 42.1 ± 15.6 J l-1 m-2 , respectively. These CEs were all smaller than that (21.6 ± 2.0%) of the healthy contrast group P < 0.01, while the IWIs were all larger than that (24.6 ± 4.8 J l-1 m-2 ) of the healthy contrast group, P < 0.01. Significance. The CEs and IWIs measured in this study may reflect physiological changes in healthy humans and pathogenic conditions in patients with cardiovascular disease., (© 2021 Institute of Physics and Engineering in Medicine.)- Published
- 2021
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33. Systematic analysis of JmjC gene family and stress--response expression of KDM5 subfamily genes in Brassica napus .
- Author
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He X, Wang Q, Pan J, Liu B, Ruan Y, and Huang Y
- Abstract
Background: Jumonji C (JmjC) proteins exert critical roles in plant development and stress response through the removal of lysine methylation from histones. Brassica napus, which originated from spontaneous hybridization by Brassica rapa and Brassica oleracea , is the most important oilseed crop after soybean. In JmjC proteins of Brassica species, the structure and function and its relationship with the parents and model plant Arabidopsis thaliana remain uncharacterized. Systematic identification and analysis for JmjC family in Brassica crops can facilitate the future functional characterization and oilseed crops improvement., Methods: Basing on the conserved JmjC domain, JmjC homologs from the three Brassica species, B. rapa (AA), B. oleracea (CC) and B. napus, were identified from the Brassica database. Some methods, such as phylogenic analysis, chromosomal mapping, HMMER searching, gene structure display and Logos analysis, were used to characterize relationships of the JmjC homologs. Synonymous and nonsynonymous nucleotide substitutions were used to infer the information of gene duplication among homologs. Then, the expression levels of BnKDM5 subfamily genes were checked under abiotic stress by qRT-PCR., Results: Sixty-five JmjC genes were identified from B. napus genome, 29 from B. rapa, and 23 from B. oleracea . These genes were grouped into seven clades based on the phylogenetic analysis, and their catalytic activities of demethylation were predicted. The average retention rate of B. napus JmjC genes ( B. napus JmjC gene from B. rapa (93.1%) and B. oleracea (82.6%)) exceeded whole genome level. JmjC sequences demonstrated high conservation in domain origination, chromosomal location, intron/exon number and catalytic sites. The gene duplication events were confirmed among the homologs. Many of the BrKDM5 subfamily genes showed higher expression under drought and NaCl treatments, but only a few genes were involved in high temperature stress., Conclusions: This study provides the first genome-wide characterization of JmjC genes in Brassica species. The BnJmjC exhibits higher conservation during the formation process of allotetraploid than the average retention rates of the whole B. napus genome. Furthermore, expression profiles of many genes indicated that BnKDM5 subfamily genes are involved in stress response to salt, drought and high temperature., Competing Interests: The authors declare there are no competing interests., (©2021 He et al.)
- Published
- 2021
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34. Optical-transparent metasurface for flexible manipulation and analog information modulation.
- Author
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Luo SS, Ruan Y, and Chen L
- Abstract
Recently, optically-transparent metasurface based on indium tin oxide (ITO) film has attracted wide attention due to its remarkable optical and electromagnetic characteristics. However, most previous researches on the ITO film mainly focus on the absorption because of its prominent loss-resistance property, but neglecting the further exploration on programmable functions. Here, we present a programmable metasurface based on an optically-transparent ITO glass, on which varactors are integrated to achieve flexible amplitude manipulation range of about 25 dB. More importantly, the presented programmable design can be applied for direct modulation on the carrier incident wave with the desired pre-designed analog wave-form. Within the 10 MHz modulation speed, both programmable amplitude manipulation and analog information modulation are demonstrated in the measurements, showing good agreement with theoretical analysis and simulations. Combining both optical transparency and programmable modulation capability, the presented metasurface will promote the potential applications in wireless communication, internet of things and other smart scenarios.
- Published
- 2021
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35. Genetic manipulation of Soc1-like genes promotes photosynthesis in flowers and leaves and enhances plant tolerance to high temperature.
- Author
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Ning G, Yan X, Chen H, Dong R, Zhang W, Ruan Y, Wang W, Bao M, Daniell H, and Jin S
- Subjects
- Gene Expression Regulation, Plant, Photosynthesis genetics, Plant Leaves genetics, Plant Leaves metabolism, Plant Proteins genetics, Plants, Genetically Modified genetics, Plants, Genetically Modified metabolism, Temperature, Flowers genetics, Flowers metabolism, MADS Domain Proteins genetics
- Published
- 2021
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36. Optically Transparent Metasurface Absorber Based on Reconfigurable and Flexible Indium Tin Oxide Film.
- Author
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Chen L, Ruan Y, Luo SS, Ye FJ, and Cui HY
- Abstract
In this paper, we present a flexible, breathable and optically transparent metasurface with ultra-wideband absorption. The designed double layer of indium tin oxide (ITO) films with specific carved structure realizes absorption and electromagnetic (EM) isolation in dual-polarization, as well as good air permeability. Under the illumination of x- and y-polarization incidence, the metasurface has low reflectivity and transmission from about 2 to 18 GHz. By employing ITO film based on polyethylene terephthalate (PET), the presented metasurface also processes the excellent flexibility and optically transparency, which can be utilized for wearable device application. In addition, the dual-layer design enables mechanically-reconfigurable property of the metasurface. The transmission and reflection coefficients in two polarizations show distinct difference when arranging the different relevant positions of two layers of the metasurface. A sample with 14*14 elements is designed, fabricated and measured, showing good agreement with the simulation results. We envision this work has various potentials in the wearable costume which demands both EM absorption and isolation.
- Published
- 2020
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37. Genome-Wide Gene Expression Profiles Analysis Reveal Novel Insights into Drought Stress in Foxtail Millet ( Setaria italica L.).
- Author
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Qin L, Chen E, Li F, Yu X, Liu Z, Yang Y, Wang R, Zhang H, Wang H, Liu B, Guan Y, and Ruan Y
- Subjects
- Antioxidants metabolism, Malondialdehyde metabolism, Photosynthesis, Plant Leaves, Plant Proteins metabolism, Plant Roots, Proline metabolism, Sequence Analysis, RNA, Transcriptome, Water chemistry, Droughts, Gene Expression Profiling, Gene Expression Regulation, Plant, Setaria Plant metabolism, Signal Transduction, Stress, Physiological
- Abstract
Foxtail millet ( Setaria italica (L.) P. Beauv) is an important food and forage crop because of its health benefits and adaptation to drought stress; however, reports of transcriptomic analysis of genes responding to re-watering after drought stress in foxtail millet are rare. The present study evaluated physiological parameters, such as proline content, p5cs enzyme activity, anti-oxidation enzyme activities, and investigated gene expression patterns using RNA sequencing of the drought-tolerant foxtail millet variety (Jigu 16) treated with drought stress and rehydration. The results indicated that drought stress-responsive genes were related to many multiple metabolic processes, such as photosynthesis, signal transduction, phenylpropanoid biosynthesis, starch and sucrose metabolism, and osmotic adjustment. Furthermore, the Δ1-pyrroline-5-carboxylate synthetase genes, SiP5CS1 and SiP5CS2 , were remarkably upregulated in foxtail millet under drought stress conditions. Foxtail millet can also recover well on rehydration after drought stress through gene regulation. Our data demonstrate that recovery on rehydration primarily involves proline metabolism, sugar metabolism, hormone signal transduction, water transport, and detoxification, plus reversal of the expression direction of most drought-responsive genes. Our results provided a detailed description of the comparative transcriptome response of foxtail millet variety Jigu 16 under drought and rehydration environments. Furthermore, we identify SiP5CS2 as an important gene likely involved in the drought tolerance of foxtail millet.
- Published
- 2020
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38. [Down-regulation of SIRT1 and PGC-1α expression caused by hyperoxia induces mitochondrial dysfunction in human alveolar epithelial cells].
- Author
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Wang F, Lei X, Kang L, Zhu X, Ruan Y, and Dong W
- Subjects
- Alveolar Epithelial Cells metabolism, Cell Hypoxia, Cell Line, Down-Regulation, Humans, Mitochondria genetics, Mitochondria metabolism, Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alpha metabolism, Sirtuin 1 metabolism, Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alpha genetics, Sirtuin 1 genetics
- Abstract
Objective To investigate SIRT1-PGC-1α signaling pathway-mediated effect of hyperoxia on mitochondrial function in A549 human alveolar epithelial cells and its possible mechanism. Methods Human alveolar epithelial cells in logarithmic growth phase were randomly divided into control group and hyperoxia group. The control group was cultured in a 37DegreesCelsius, 50 mL/L CO
2 saturated humidity incubator, and the hyperoxia group was treated with 950 mL/L O2 . Following 24-hour culture, Mito SOXTM staining was used to detect the level of mitochondrial reactive oxygen species (Mito-ROS) and JC-1 staining to detect the mitochondrial membrane potential. Real-time quantitative PCR was performed to detect the mitochondrial DNA content and the mRNA levels of SIRT1, PGC-1α, nuclear respiratory factor 1 (NRF1) and mitochondrial transcription factor A (TFAM), and Western blotting to detect the protein levels of SIRT1, PGC-1α, NRF1 and TFAM. Results Compared with the control group, the Mito-ROS of the hyperoxia group increased significantly, while the membrane potential decreased obviously; the mitochondrial DNA content of the hyperoxia group went down, and the mRNA and protein expression of SIRT1, PGC-1α, NRF1 and TFAM dropped. Conclusion Hyperoxia induces mitochondrial dysfunction in human alveolar epithelial cells by inhibiting the expression of SIRT1 and PGC-1α.- Published
- 2020
39. [Transplantation of Autologous Peritoneum Using Ileal Seromuscular Flaps for Orthotopic Neobladder Reconstruction].
- Author
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Shen J, Song ZQ, Shen HS, Li CF, Ruan YM, and Li SW
- Subjects
- Animals, Cystectomy, Female, Postoperative Complications, Surgical Flaps, Swine, Ileum, Peritoneum, Urinary Bladder Neoplasms
- Abstract
Objective To develop an ideal surgical procedure for neobladder reconstruction in experimental porcine models. Methods Six experimental female pigs weighting 28-33 kg underwent transplantation of autologous peritoneum for bladder reconstruction under general anesthesia.The flaps were used to reconstruct the orthotopic neobladder by suturing with the edges of the triangle and neck of the remnant bladder.The ureteral catheters were removed on the 5
th postoperative day and the balloon catheter was removed on the 7th postoperative day.Voiding behaviour was monitored.The animals were euthanized at week 12 for routine pathology,immunohistochemistry,and electron microscopy. Results All the pigs survived after the surgery,and no postoperative complication such as peritonitis,intestinal obstruction,or urinary fistula was observed.All the peritoneum-ileum composite free valves survived after transplantation.Voiding behaviour was normal after catheter removal,and the urine was clear.At autopsy,reconstructed bladders were healthy.Pathological examination showed the neobladder had been covered by continuous urothelium while the peritoneum disappeared and showed no ileal mucosa regrowth and residual.Scanning electron microscope showed the transitional cells of neobladder were complete and orderly,and the urothelium around suture border was continuous and showed no malposition. Conclusions Reconstruction of bladder by autologous peritoneum and ileal seromuscular flaps is an ideal approach in the experimental pigs as it can prevent regrowth of ileal epithelial cells and avoid the complications of conventional enterocystoplasty.Its clinical application deserves further investigations.- Published
- 2020
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40. Using β-ocimene to increase the artemisinin content in juvenile plants of Artemisia annua L.
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Xiao M, Liu R, Long C, Ruan Y, and Liu C
- Subjects
- Artemisia annua genetics, Artemisia annua metabolism, Biosynthetic Pathways drug effects, Gene Expression Regulation, Plant drug effects, Seedlings metabolism, Trichomes metabolism, Acyclic Monoterpenes pharmacology, Alkenes pharmacology, Artemisia annua drug effects, Artemisinins analysis, Artemisinins metabolism
- Abstract
Objective: The anti-malarial drug, artemisinin, is harvested from the leaves of adult Artemisia annua L. plants. As its concentration in juvenile plants is very low, the present study aimed to assess if the airborne signaling molecule, β-ocimene, could be used to enhance artemisinin accumulation in juvenile A. annua plants., Results: Application of exogenous β-ocimene increased artemisinin accumulation in A. annua. Treatment with 10 µM β-ocimene for 4 days resulted in juvenile plants accumulating artemisinin contents of up to 25 mg/g (2.5%) of dry weight. The expression levels of key genes encoding enzymes involved in both precursor biosynthetic pathways and artemisinin biosynthetic pathways induced by β-ocimene were upregulated. Glandular secretory trichome (GST) size and density increased by 49.2% and 38.2%, respectively, along with the upregulation of genes associated with GST development., Conclusion: β-ocimene enhances artemisinin accumulation in juvenile A. annua plants by modulating artemisinin biosynthetic pathways and GST development.
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- 2020
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41. Prognostic Impact of the Number of Examined Lymph Nodes in Stage II Colorectal Adenocarcinoma: A Retrospective Study.
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Lei P, Ruan Y, Liu J, Zhang Q, Tang X, and Wu J
- Abstract
Background: Evaluation of lymph node status is critical in colorectal carcinoma (CRC) treatment. However, as patients with node involvement may be incorrectly classified into earlier stages if the examined lymph node (ELN) number is too small and escape adjuvant therapy, especially for stage II CRC. The aims of this study were to assess the impact of the ELN on the survival of patients with stage II colorectal cancer and to determine the optimal number., Methods: Data from the US Surveillance, Epidemiology, and End Results (SEER) database on stage II resected CRC (1988-2013) were extracted for mathematical modeling as ELN was available since 1988. Relationship between ELN count and stage migration and disease-specific survival was analyzed by using multivariable models. The series of the mean positive LNs, odds ratios (ORs), and hazard ratios (HRs) were fitted with a LOWESS (Locally Weighted Scatterplot Smoothing) smoother, and the structural break points were determined by the Chow test. An independent cohort of cases from 2014 was retrieved for validation in 5-year disease-specific survival (DSS)., Results: An increased ELN count was associated with a higher possibility of metastasis LN detection (OR 1.010, CI 1.009-1.011, p < 0.001) and better DSS in LN negative patients (OR 0.976, CI 0.975-0.977, p < 0.001). The cut-off point analysis showed a threshold ELN count of 21 nodes (HR 0.692, CI 0.667-0.719, p < 0.001) and was validated with significantly better DSS in the SEER 2009 cohort CRC (OR 0.657, CI 0.522-0.827, p < 0.001). The cut-off value of the ELN count in site-specific surgeries was analyzed as 20 nodes in the right hemicolectomy (HR 0.674, CI 0.638-0.713, p < 0.001), 19 nodes in left hemicolectomy (HR 0.691, CI 0.639-0.749, p < 0.001), and 20 nodes in rectal resection patients (HR 0.671, CI 0.604-0.746, p < 0.001), respectively., Conclusions: A higher number of ELNs are associated with more-accurate node staging and better prognosis in stage II CRCs. We recommend that at least 21 lymph nodes be examined for accurate diagnosis of stage II colorectal cancer., Competing Interests: There are no conflicts of interest in the current study., (Copyright © 2020 Purun Lei et al.)
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- 2020
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42. Light-controllable metasurface for microwave wavefront manipulation.
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Chen L, Nie QF, Ruan Y, Luo SS, Ye FJ, and Cui HY
- Abstract
Applying multiple physical fields to artificial manipulate electromagnetic waves is a highly stirring research. In this paper, we creatively combine light control with microwave scattering, realizing an optically coding metasurface for beam deflection based on anomalous reflection. A photoresistor and a voltage-driven module are connected to control each row of PIN-diode-loaded unit cells, endowing the reflection phase of the elements with a strong dependence on light. Owing to the high sensitivity of photoresistor, the digital element state "0" or "1" can be switched effectively via light variation sensed by the photoresistor. By modulating the light signal, the arrangement of digital elements can be reprogrammed, generating the specific scattering field. Therefore, the electromagnetic field can be determined by the spatial distribution of light, which induces the connect with the optical information and microwave field. The simulated and experimental results demonstrate the feasibility of our design. This light-steering approach provides a dimension for electromagnetic wave modulation.
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- 2020
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43. Adaptation of Rice to the Nordic Climate Yields Potential for Rice Cultivation at Most Northerly Site and the Organic Production of Low-Arsenic and High-Protein Rice.
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Fei M, Jin Y, Jin L, Su J, Ruan Y, Wang F, Liu C, and Sun C
- Abstract
There is an urgent demand for low-arsenic rice in the global market, particularly for consumption by small children. Soils in Uppsala, Sweden, contain low concentrations of arsenic (As). We hypothesize that if certain japonica paddy rice varieties can adapt to the cold climate and long day length in Uppsala and produce normal grains, such a variety could be used for organic production of low-arsenic rice for safe rice consumption. A japonica paddy rice variety, "Heijing 5," can be cultivated in Uppsala, Sweden, after several years' adaptation, provided that the rice plants are kept under a simple plastic cover when the temperature is below 10°C. Uppsala-adapted "Heijing 5" has a low concentration of 0.1 mg per kg and high protein content of 12.6% per dry weight in brown rice grain, meaning that it thus complies with all dietary requirements determined by the EU and other countries for small children. The high protein content is particularly good for small children in terms of nutrition. Theoretically, Uppsala-adapted "Heijing 5" can produce a yield of around 5100 kg per ha, and it has a potential for organic production. In addition, we speculate that cultivation of paddy rice can remove nitrogen and phosphorus from Swedish river water and reduce nutrient loads to the Baltic Sea and associated algae blooms., (Copyright © 2020 Fei, Jin, Jin, Su, Ruan, Wang, Liu and Sun.)
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- 2020
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44. The Changes of Twist1 Pathway in Pulmonary Microvascular Permeability in a Newborn Rat Model of Hyperoxia-Induced Acute Lung Injury.
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Ruan Y, Dong W, Kang L, Lei X, Zhang R, Wang F, and Zhu X
- Abstract
Background: Bronchopulmonary dysplasia (BPD) is a chronic lung disease in preterm infants, which is characterized by alveolar and vascular dysplasia and increased vascular permeability. Hyperoxia is a critical factor in the pathogenesis of BPD, hyperoxia-induced acute lung injury (HALI) model has similar pathological manifestations as human BPD, therefore, may provide insight into the pathogenesis of human BPD. Studies have shown that Twist1 regulates pulmonary vascular permeability of LPS-induced lung injury through the Ang-Tie2 pathway. However, the effect of Twist1 pathway on vascular permeability in HALI has not been reported. Methods: We randomly exposed newborn rats to the room air or hyperoxia for 14 days. Lung histopathology, immunofluorescence, vascular permeability, mRNA and protein expression was assessed on day 1,7,14. Results: Our results verified that hyperoxia caused alveolar and vascular developmental disorders and increased pulmonary vascular permeability, which was consistent with previous findings. In hyperoxia-exposed rat lungs, the expressions of Twist1, Ang1, Tie1, Tie2, and pTie2 were significantly reduced, whereas the expression of Ang2 was significantly increased. Next, we observed a significant down-regulation of the Akt/Foxo1 pathway. Conclusion: In HALI, the pulmonary microvascular permeability was increased, accompanied by changes in Twist1-Tie2 pathway which combined to Angs, and downregulation of Tie1 and Akt/Foxo1 pathway., (Copyright © 2020 Ruan, Dong, Kang, Lei, Zhang, Wang and Zhu.)
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- 2020
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45. Risk factors analysis for surgical site infection following elective colorectal resection: a retrospective regression analysis.
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Lei PR, Liao JW, Ruan Y, Yang XF, Hu KP, Liu JP, and Chen TF
- Subjects
- Aged, Anti-Bacterial Agents therapeutic use, Colorectal Neoplasms drug therapy, Female, Humans, Male, Middle Aged, Multivariate Analysis, Odds Ratio, Propensity Score, Regression Analysis, Retrospective Studies, Risk Factors, Colorectal Neoplasms surgery
- Abstract
Background: A surgical site infection (SSI) is a major post-operative complication from elective colorectal surgery; however, few studies have focused on evaluating the risk factors for SSI. This study aimed to analyze the relative correlation of medical and environmental factors as well as patient-related factors that contribute to the incidence of all types of SSI., Methods: A retrospective search for eligible patients was conducted using the patient database of the Gastrointestinal Surgery Center of the Third Affiliated Hospital of Sun Yat-sen University from January 2011 to August 2017. Pre-operative demographic and surgical data were extracted and recoded according to the study protocol. Univariate and multivariate analyses were performed to clarify factors affecting the incidence of SSI. Propensity analysis was conducted to minimize bias in the demographic characteristics to explore the prophylactic effect of pre-operative administration of oral antibiotics., Results: Univariate analysis of the baseline characteristics revealed that younger age (odds ratio [OR]: 0.378; 95% confidence interval [CI]: 0.218-0.657) and pre-operative oral antibiotic use (OR: 0.465; 95% CI: 0.255-0.850) were protective factors, while pre-operative anemia (OR: 4.591; 95% CI: 2.567-8.211), neoadjuvant chemotherapy history (OR: 2.398; 95% CI: 1.094-5.256), and longer surgical duration (OR: 2.393; 95% CI: 1.349-4.246; P = 0.002) were identified as risk factors for SSI. Multivariate analysis indicated that age (P = 0.003), surgical duration (P = 0.001), and pre-operative oral antibiotic use (P < 0.001) were independent factors that affect the incidence of SSI. Furthermore, a propensity-matched analysis confirmed the protective effect of oral antibiotic use, with a 1-day course of oral antibiotic producing a similar effect to a 3-day course., Conclusions: Age, surgical duration, and pre-operative oral antibiotic use were associated with the incidence of SSI. However, pre-operative oral antibiotic use was the only controllable factor. From the results of our study, pre-operative oral antibiotic use is recommended before elective colorectal surgery and a 1-day course is enough to provide the protective effect.
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- 2020
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46. Preoperative mechanical bowel preparation with oral antibiotics reduces surgical site infection after elective colorectal surgery for malignancies: results of a propensity matching analysis.
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Lei P, Ruan Y, Yang X, Wu J, Hou Y, Wei H, and Chen T
- Subjects
- Administration, Oral, Aged, Anti-Bacterial Agents, Case-Control Studies, Cefmetazole administration & dosage, Chemotherapy, Adjuvant methods, Chemotherapy, Adjuvant statistics & numerical data, Colon pathology, Colon surgery, Colorectal Neoplasms pathology, Combined Modality Therapy methods, Drug Administration Schedule, Female, Humans, Infusions, Intravenous, Male, Middle Aged, Neoadjuvant Therapy methods, Neoadjuvant Therapy statistics & numerical data, Prognosis, Propensity Score, Rectum pathology, Rectum surgery, Surgical Wound Infection etiology, Surgical Wound Infection prevention & control, Treatment Outcome, Antibiotic Prophylaxis methods, Cathartics administration & dosage, Colorectal Neoplasms therapy, Elective Surgical Procedures adverse effects, Preoperative Care methods, Surgical Wound Infection epidemiology
- Abstract
Background: Surgical site infections (SSIs) are a major postoperative complication after colorectal surgery. Current study aims to evaluate prophylactic function of oral antibiotic (OA) intake in combination with mechanical bowel preparation (MBP) relative to MBP alone with respect to postoperative SSI incidence., Methods: A retrospective analysis of eligible patients was conducted using the databases of the Gastrointestinal Surgery Centre, Third Affiliated Hospital of Sun Yat-sen University from 2011 to 2017. Data pertaining to postoperative hospital stay length, expenses, SSI incidence, anastomotic fistula incidence, and rates of other complications were extracted and compared. A propensity analysis was conducted to minimize bias associated with demographic characteristics. Subgroup analyses were performed to further explore protective effects of OA in different surgical sites., Results: The combination of OAs and MBP was related to a significant decrease in the incidence of overall SSIs, superficial SSI, and hospitalization expenses. The MBP + OA modality was particularly beneficial for patients undergoing left-side colon or rectum resections, with clear prophylactic efficacy. The combination of MPB + OA did not exhibit significant prophylactic efficacy in patients undergoing right hemi-colon resection. Age, surgical duration, and application of OA were all independent factors associated with the occurrence of SSIs., Conclusion: These results suggest that the combination of OA + MBP should be recommended for patients undergoing elective colorectal surgery, particularly for operations on the left side of the colon or rectum., Trial Registration: NCT04258098. Retrospectively registered.
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- 2020
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47. Laparoscopic colorectal resection combined with simultaneous thermal ablation or surgical resection of liver metastasis: a retrospective comparative study.
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Lei P, Ruan Y, Tan L, Wei H, and Chen T
- Subjects
- Colorectal Neoplasms pathology, Female, Humans, Hyperthermia, Induced, Liver Neoplasms secondary, Male, Middle Aged, Prognosis, Radiofrequency Ablation, Retrospective Studies, Colorectal Neoplasms surgery, Laparoscopy methods, Liver Neoplasms radiotherapy, Liver Neoplasms surgery
- Abstract
Objective: Colorectal liver metastasis is a critical cause of mortality. However, the safety and long-term prognosis of simultaneous colorectal tumor resection along with hepatic lesion ablation are debated. The current analysis was conducted to further clarify the controversy. Methods: In this retrospective study, we collected data of 68 patients who underwent ablation or resection for liver lesions combined with simultaneous laparoscopic primary colorectal tumor resection between September 2011 and October 2016 at the Third Affiliated Hospital of Sun Yat-sen University. Perioperative outcomes and long-term follow-up data were compared between patients in the resection and ablation groups. Results: Both groups had similar surgical duration (286.70 ± 78.33 vs. 313.67 ± 80.90 min), conversion rate (2 vs. 0), total expenses (81.51 ± 20.20 vs. 82.21 ± 27.81 kRMB, p = .914) and morbidities (11 vs. 24, p = .667). However, the postoperative hospital stays (12.82 ± 9.25 vs. 8.40 ± 2.38 d) and transfusion rates (56.52% vs. 8.89%) were significantly lower in the ablation group. The long-term overall survival ( p = .714), disease-free survival ( p = .680) and intra-hepatic recurrent-free survival ( p = .496) were comparable between both groups. Conclusion: With respect to simultaneous treatment for both primary colorectal cancer and liver metastasis, hepatic lesion ablation was associated with lower blood loss and hospital stay duration than liver resection, without compromising the surgical safety and long-term prognosis.
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- 2020
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48. Arabidopsis ZUOTIN RELATED FACTOR1 Proteins Are Required for Proper Embryonic and Post-Embryonic Root Development.
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Chen D, Wang Q, Feng J, Ruan Y, and Shen WH
- Abstract
The H2A/UBIQUITIN-binding proteins AtZRF1a/b have been reported as key regulators involved in multiple processes of Arabidopsis plant growth and development. Yet, the cellular and molecular mechanisms underlying the mutant phenotype remain largely elusive. Here we show that loss-of-function of AtZRF1a/b causes defective root elongation and deformed root apical meristem organization in seedlings. The premature termination of the primary root in the atzrf1a;atzrf1b double mutant is associated with an advanced onset of endoreduplication and subsequent consumption of reservoir stem cells. Cytological analyses using cell type-specific markers and florescent dyes indicate that AtZRF1a/b are involved in maintenance of proper cell layer organization, determinacy of cell identity, and establishment of auxin gradient and maximum at the root tip. During embryogenesis AtZRF1a/b act dominantly in regulating the maintenance of ground tissue initial cells and production of lateral root cap. Lastly, quantitative real-time polymerase chain reaction analysis shows mis-expression of some key genes involved in regulating cell patterning, cell proliferation and/or hormone pathways. Our results provide important insight into AtZRF1a/b function in cell fate determinacy and in establishment and maintenance of proper stem cell reservoir during embryonic and post-embryonic root development., (Copyright © 2019 Chen, Wang, Feng, Ruan and Shen.)
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- 2019
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49. The Molecular Mechanism of Sirt1 Signaling Pathway in Brain Injury of Newborn Rats Exposed to Hyperoxia.
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Kang L, Dong W, Ruan Y, Zhang R, and Wang X
- Subjects
- Animals, Animals, Newborn, Apoptosis, Body Weight, Brain metabolism, Rats, Sprague-Dawley, Reactive Oxygen Species metabolism, Tumor Suppressor Protein p53 metabolism, Brain Injuries metabolism, Brain Injuries pathology, Hyperoxia metabolism, Sirtuin 1 metabolism
- Abstract
The aim of the study was to investigate the changes in the reactive oxygen species (ROS), Sirt1, p53 and acetylated p53 in brain tissue of newborn rats exposed to hyperoxia to clarify the role of Sirt1 signaling pathway in brain injury. Neonate rats were randomly divided into normoxic group and hyperoxic group. Rats in the normoxic group were exposed to room air while the rats in the hyperoxic group were put in a hyperoxic chamber (80 ± 5% oxygen) for 1 to 14 d. Data, including weight growth, the water content of brain tissue, hematoxyline and eosin (H&E) and terminal deoxynucleotidyl transferase-mediated deoxyuridine triphosphate nick-end labeling (Tunel) stain, ROS expression, the relative expression of Sirt1 mRNA and p53 mRNA, and the protein relative expression of Sirt1, p53 and acetylated p53 were analyzed at 1, 7 and 14 d after exposure. A reduced body weight and increased water content were observed in the brain tissue of hyperoxic group compared to normoxic group. HE staining and Tunel staining of brain tissue suggested that cell damaged after hyperoxic exposure. RT-PCR and Western blot results showed that the expression of Sirt1 in the hyperoxic group was lower than that in the normoxic group while the expression of p53 was higher than that in the normoxic group. In addition, Western blot data indicated acetylated p53 expression was higher in the hyperoxic group. Hyperoxic exposure can lead to brain injury in newborn Sprague-Dawley (SD) rats. These events might be regulated by the Sirt1 pathway, which downregulated the deacetylation of p53.
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- 2019
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50. Genome-wide analysis of sulfotransferase genes and their responses to abiotic stresses in Chinese cabbage (Brassica rapa L.).
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Jin L, Ouyang N, Huang Y, Liu C, and Ruan Y
- Subjects
- Arabidopsis genetics, Chromosome Mapping, Gene Expression Profiling, Genome, Plant genetics, Multigene Family genetics, Phylogeny, Brassica rapa genetics, Gene Expression Regulation, Plant, Plant Proteins genetics, Stress, Physiological genetics, Sulfotransferases genetics
- Abstract
Sulfotransferases (SOTs; EC 2.8.2.-), which are widespread from prokaryotes to eukaryotes, constitute a multi-protein family that plays crucial roles in plant growth, development and stress adaptation. However, this family has not been systemically investigated in Brassica rapa. Here, a genome-wide systemic analysis of SOT genes in B. rapa subsp. pekinensis, a globally cultivated vegetable, were conducted. We identified 56 SOT genes from the whole B. rapa genome using Arabidopsis SOT sequences as queries and classified them into nine groups, rather than the eight groups of previous research. 56 B. rapa SOT genes (BraSOTs) were distributed on all 10 chromosomes except for chromosome 5. Of these, 27 BraSOTs were distributed in seven clusters on five chromosomes (ChrA01, ChrA02, Chr03, ChrA07, and Chr09). Among the BraSOT proteins, 48 had only one SOT_1 domain and 6 had two, while 2 had one SOT_3 domain. Additionally, 47 BraSOT proteins contained only known SOT domains. The remaining nine proteins, five in group-VIII and two in group-IX, contained additional transmembrane domains. Specific motif regions I and IV for 3'-phosphoadenosine 5'-phosphosulfate binding were found in 41 BraSOT proteins. Introns were present in only 18 BraSOT genes, and all seven BraSOT genes in groups VIII and IX had more than three introns. To identify crucial SOTs mediating the response to abiotic stress in B. rapa, expression changes in 56 BraSOT genes were determined by quantitative RT-PCR after drought, salinity, and ABA treatments, and some BraSOT genes were associated with NaCl, drought and ABA stress, e.g. Bra017370, Bra009300, Bra027880., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2019
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