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Methane-oxidizing bacteria (MOB) is a group of planktonic microorganisms that use methane as their primary source of cellular energy. For tropical lakes in monsoon Asia, there is currently a knowledge gap on MOB community diversity and the factors influencing their abundance. Herewith, we present a preliminary assessment of the MOB communities in three maar lakes in tropical monsoon Asia using Catalyzed Reporter Deposition, Fluorescence In-Situ Hybridization (CARD-FISH), 16S rRNA amplicon sequencing, and pmoA gene sequencing. Correlation analysis between MOB abundances and lakes' physicochemical parameters following seasonal monsoon events were performed to explain observed spatial and temporal patterns in MOB diversity. The CARD-FISH analyses detected the three MOB types (I, II, and NC10) which aligned with the results from 16S rRNA amplicons and pmoA gene sequencing. Among community members based on 16S rRNA genes, Proteobacterial Type I MOB (e.g., Methylococcaceae and Methylomonadaceae), Proteobacterial Type II (Methylocystaceae), Verrucomicrobial (Methylacidiphilaceae), Methylomirabilota/NC10 (Methylomirabilaceae), and archaeal ANME-1a were found to be the dominant methane-oxidizers in three maar lakes. Analysis of microbial diversity and distribution revealed that the community compositions in Lake Yambo vary with the seasons and are more distinct during the stratified period. Temperature, DO, and pH were significantly and inversely linked with type I MOB and Methylomirabilota during stratification. Only MOB type I was influenced by monsoon changes. This research sought to establish a baseline for the diversity and ecology of planktonic MOB in tropical monsoon Asia to better comprehend their contribution to the CH 4 cycle in tropical freshwater ecosystems., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2024 Bicaldo, Padilla, Tu, Chen, Mendoza-Pascual, Vicera, de Leon, Poblete, Austria, Lopez, Kobayashi, Shiah, Papa, Okuda, Wang and Lin.)

Monitoring the ecological integrity of streams is a challenge, especially in the tropics, which experience high rates of degradation. Multimetric scoring systems have been widely used in other countries in evaluating current stream conditions; however, it has never been done in the Philippines. This study focuses on the development of a benthic macroinvertebrate-based multimetric index for the overall assessment of streams in Mt. Apo, Mindanao, Philippines. The index was used to develop existing physicochemical and biological data obtained during 2010 to 2015 surveys from 15 monitoring sites within the Mt. Apo Geothermal Project (MAGP). Metrics related to benthic macroinvertebrate abundance, richness, composition, functional habit groups, functional feeding groups, and pollution tolerance were screened for their range, temporal stability, sensitivity, discrimination efficiency (DE), redundancy, and responsiveness to anthropogenic impacts. The resulting multimetric index, the Mt. Apo Biotic Index (MABI), is computed as the sum of the individual metric scores after metric transformation using the discrete scoring method DRQ1 (D = discrete, R = reference, Q1 = 25th percentile) of the six core metrics: (1) number of Coleoptera individuals (abundance), (2) number of taxa (richness); (3) [%] Coleoptera taxa (composition), (4) number of sprawler individuals (functional habit group), (5) [%] collector-filterer taxa (functional feeding group), and (6) the Biological Monitoring Working Party Thai version (BMWP-Thai; pollution tolerance). MABI scores were classified into five condition ratings of stream biotic integrity: very poor (6 to 10), poor (11 to 15), fair (16 to 20), good (21 to 25), and excellent (26 to 30). The study demonstrated that the resulting pilot index may provide useful information that will benefit policymakers and resource managers in formulating more comprehensive stream management approaches and conservation plans for priority sites in the region., (© 2023. The Author(s), under exclusive licence to Springer Nature Switzerland AG.)

The center-periphery hypothesis (CPH) predicts that peripheral populations will have lower genetic variation than those at the center of a species' distribution. However, ecological margins do not always coincide with geographical edges when topographies are diverse. Historical climate changes can also strongly affect genetic variation. Here, we examined genetic variation in Phyllodiaptomus tunguidus, a calanoid copepod endemic to the north-eastern Oriental. This species was predicted to exhibit a complex pattern of genetic variation across its range due to the diverse topographies and stable climate history of the north-eastern Oriental. To test this, we used geographic distance to the center of the distribution, current ecological suitability, and climate during the last glacial maximum as geographical, ecological, and historical factors, respectively, in our analyses. We measured genetic diversity and population differentiation using mitochondrial and nuclear markers. This showed that P. tunguidus had 3 refugia during the last glacial maximum (LGM). Such a pattern of multiple refugia complicates the determination of the center and periphery of spatial genetic diversity. Both regression models and redundancy analyses failed to support the CPH. Instead, they showed that geographical, ecological, and historical factors together shaped population genetic structure in this species. Ecological factors explained significantly more genetic variation than did geographical and historical factors-however, all three factors interacted significantly to affect the pattern of genetic variation. The results extend our understanding of the CPH and the extent to which it can explain genetic variation across populations., (© The Author(s) 2022. Published by Oxford University Press on behalf of The Society for the Study of Evolution (SSE). All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)

Background: The success of phage therapy is affected by the method of treatment delivery. This study focused on comparing different phage delivery routes, specifically oral (phage-impregnated feed), intraperitoneal (IP), and bath (immersion), in treatment of induced motile Aeromonas septicemia (MAS). Materials and Methods: The efficacy of Aeromonas hydrophila phage cocktail in treating MAS-infected Oreochromis niloticus through different delivery routes was assessed by challenging the fish with 100% lethal dose of A. hydrophila and conducting a 15-day treatment regimen. Blood and kidney samples were analyzed for bacterial and phage concentrations. Results: All routes exhibited reduction of disease symptoms, significant ( p  < 0.05) decrease in bacterial count, and increase in phage count. Notably, IP route showed significant activity in reducing bacterial load. Conclusions: Phage therapy through IP route is the most effective yet invasive in controlling MAS infection in O. niloticus . The efficacy of oral route depends on the fish's intake of feeds, whereas the bath route was the least effective., Competing Interests: No competing financial interests exist., (Copyright 2020, Mary Ann Liebert, Inc., publishers.)

Body size and environmental prey availability are both key factors determining feeding habits of gape-limited fish predators. However, our understanding of their interactive or relative effects is still limited. In this study, we performed quantitative dietary analysis of different body sizes of goby (Gymnogobius isaza) specimens collected from Lake Biwa between 1962 and 2004. First, we report that the diet was composed mainly of zooplankton (cladocerans and copepods) before the 1980s, and thereafter, shifted to zoobenthos (gammarids). This foraging shift coincided with, and thus can be linked to, known historical events in the lake at that time: decrease in zooplankton abundance with the alleviation of eutrophication, increase in fish body size resulting from fish population collapse, and increase in gammarid abundance due to reduced fish predation pressure. Supporting this view, our data analyses revealed how the long-term changes in the diet composition would be co-mediated by changes in fish body size and environmental prey availability. Specifically, while zoobenthos abundance strongly affected the fish diet composition, larger (smaller) fish preferred zoobenthos (zooplankton). Furthermore, the body size effects were stronger than those of prey availability. These results provide the best long-term evidence that fish feeding habits vary over decades with its body size and prey community due to anthropogenic disturbances.