1. Postanalytical tools improve performance of newborn screening by tandem mass spectrometry.
- Author
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Hall PL, Marquardt G, McHugh DM, Currier RJ, Tang H, Stoway SD, and Rinaldo P
- Subjects
- Amino Acids blood, California, Carnitine analogs & derivatives, Carnitine blood, Computational Biology, False Positive Reactions, Female, Humans, Infant, Newborn, Internet, Male, Minnesota, Predictive Value of Tests, Retrospective Studies, Software, Neonatal Screening methods, Tandem Mass Spectrometry methods
- Abstract
Purpose: The purpose of this study was to compare performance metrics of postanalytical interpretive tools of the Region 4 Stork collaborative project to the actual outcome based on cutoff values for amino acids and acylcarnitines selected by the California newborn screening program., Methods: This study was a retrospective review of the outcome of 176,186 subjects born in California between 1 January and 30 June 2012. Raw data were uploaded to the Region 4 Stork Web portal as .csv files to calculate tool scores for 48 conditions simultaneously using a previously unpublished functionality, the tool runner. Scores for individual target conditions were deemed informative when equal or greater to the value representing the first percentile rank of known true-positive cases (17,099 cases in total)., Results: In the study period, the actual false-positive rate and positive predictive value were 0.26 and 10%, respectively. Utilization of the Region 4 Stork tools, simple interpretation rules, and second-tier tests could have achieved a false-positive rate as low as 0.02% and a positive predictive value >50% by replacing the cutoff system with Region 4 Stork tools as the primary method for postanalytical interpretation., Conclusion: Region 4 Stork interpretive tools, second-tier tests, and other evidence-based interpretation rules could have reduced false-positive cases by up to 90% in California.
- Published
- 2014
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