1. Harnessing HetHydrogel: A Universal Platform to Dropletize Single-Cell Multiomics.
- Author
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Zhou G, Li T, Du J, Wu M, Lin D, Pu W, Zhang J, and Gu Z
- Subjects
- Humans, Animals, Mutation, Multiomics, Single-Cell Analysis, Hydrogels chemistry, DNA, Mitochondrial genetics
- Abstract
A universal platform is developed for dropletizing single cell plate-based multiomic assays, consisting of three main pillars: a miniaturized open Heterogeneous Hydrogel reactor (abbreviated HetHydrogel) for multi-step biochemistry, its tunable permeability that allows Tn5 tagmentation, and single cell droplet barcoding. Through optimizing the HetHydrogel manufacturing procedure, the chemical composition, and cell permeation conditions, simultaneous high-throughput mitochondrial DNA genotyping and chromatin profiling at the single-cell level are demonstrated using a mixed-species experiment. This platform offers a powerful way to investigate the genotype-phenotype relationships of various mtDNA mutations in biological processes. The HetHydrogel platform is believed to have the potential to democratize droplet technologies, upgrading a whole range of plate-based single cell assays to high throughput format., (© 2024 Wiley‐VCH GmbH.)
- Published
- 2024
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