124 results on '"Lin, Fu-Cheng"'
Search Results
2. A Taxonomic Study of Candolleomyces Specimens from China Revealed Seven New Species.
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Han XX, Phurbu D, Ma GF, Li YZ, Mei YJ, Liu DM, Lin FC, Zhao RL, Thongklang N, and Cao B
- Abstract
Based on phylogenetic analysis, Candolleomyces (Psathyrellaceae, Agaricales) was established with Psathyrella candolleana as the type species. The basidiomes range from small to large and are typically terrestrial, lignicolous, and rarely fimicolous. We analysed the Candolleomyces species collected during five years in China, and based on morphological and molecular data (nrITS, nrLSU, and tef-1α ), we propose seven new Candolleomyces species viz. C. brevisporus , C. gyirongicus , C. lignicola , C. luridus , C. shennongdingicus , C. shennongjianus , and C. sichuanicus . Full descriptions, colour photographs, illustrations, phylogenetic analyses results, and comparisons with related Candolleomyces species of the new taxa are provided. This study enriches the species diversity of Candolleomyces in China.
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- 2024
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3. Dihydroorotase MoPyr4 is required for development, pathogenicity, and autophagy in rice blast fungus.
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Wang JY, Cai YY, Li L, Zhu XM, Shen ZF, Wang ZH, Liao J, Lu JP, Liu XH, and Lin FC
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- Virulence genetics, Peroxisomes metabolism, Plant Diseases microbiology, Ascomycota pathogenicity, Ascomycota genetics, Ascomycota enzymology, MAP Kinase Signaling System, Oxidative Stress, Autophagy, Fungal Proteins metabolism, Fungal Proteins genetics, Oryza microbiology
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Dihydroorotase (DHOase) is the third enzyme in the six enzymatic reaction steps of the endogenous pyrimidine nucleotide de novo biosynthesis pathway, which is a metabolic pathway conserved in both bacteria and eukaryotes. However, research on the biological function of DHOase in plant pathogenic fungi is very limited. In this study, we identified and named MoPyr4, a homologous protein of Saccharomyces cerevisiae DHOase Ura4, in the rice blast fungus Magnaporthe oryzae and investigated its ability to regulate fungal growth, pathogenicity, and autophagy. Deletion of MoPYR4 led to defects in growth, conidiation, appressorium formation, the transfer and degradation of glycogen and lipid droplets, appressorium turgor accumulation, and invasive hypha expansion in M. oryzae, which eventually resulted in weakened fungal pathogenicity. Long-term replenishment of exogenous uridine-5'-phosphate (UMP) can effectively restore the phenotype and virulence of the ΔMopyr4 mutant. Further study revealed that MoPyr4 also participated in the regulation of the Pmk1-MAPK signaling pathway, co-localized with peroxisomes for the oxidative stress response, and was involved in the regulation of the Osm1-MAPK signaling pathway in response to hyperosmotic stress. In addition, MoPyr4 interacted with MoAtg5, the core protein involved in autophagy, and positively regulated autophagic degradation. Taken together, our results suggested that MoPyr4 for UMP biosynthesis was crucial for the development and pathogenicity of M. oryzae. We also revealed that MoPyr4 played an essential role in the external stress response and pathogenic mechanism through participation in the Pmk1-MAPK signaling pathway, peroxisome-related oxidative stress response mechanism, the Osm1-MAPK signaling pathway and the autophagy pathway., (© 2024. The Author(s).)
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- 2024
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4. A rho-type GTPase activating protein affects the growth and development of Cordyceps cicadae.
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Li X, Zou Y, Shrivastava N, Bao J, Lin FC, and Wang H
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- GTPase-Activating Proteins metabolism, GTPase-Activating Proteins genetics, Fungal Proteins metabolism, Fungal Proteins genetics, Adenosine metabolism, Polysaccharides metabolism, Fruiting Bodies, Fungal growth & development, Fruiting Bodies, Fungal metabolism, Fruiting Bodies, Fungal genetics, Cordyceps metabolism, Cordyceps genetics, Cordyceps growth & development
- Abstract
Cordyceps cicadae is recognized for its medicinal properties, attributed to bioactive constituents like polysaccharides and adenosine, which have been shown to improve kidney and liver functions and possess anti-tumor properties. Rho GTPase activating proteins (Rho GAPs) serve as inhibitory regulators of Rho GTPases in eukaryotic cells by accelerating the GTP hydrolysis of Rho GTPases, leading to their inactivation. In this study, we explored the function of the CcRga8 gene in C. cicadae, which encodes a Rho-type GTPase activating protein. Our study found that the knockout of CcRga8 resulted in a decrease in polysaccharide levels and an increase in adenosine concentration. Furthermore, the mutants exhibited altered spore yield and morphology, fruiting body development, decreased infectivity, reduced resistance to hyperosmotic stress, oxidative conditions, and cell wall inhibitors. These findings suggest that CcRga8 plays a crucial role in the development, stress response, and bioactive compound production of C. cicadae., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2024
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5. Csn5 inhibits autophagy by regulating the ubiquitination of Atg6 and Tor to mediate the pathogenicity of Magnaporthe oryzae.
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Shen ZF, Li L, Wang JY, Liao J, Zhang YR, Zhu XM, Wang ZH, Lu JP, Liu XH, and Lin FC
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- Virulence, Proteins, Ubiquitination, Autophagy, Ascomycota
- Abstract
Csn5 is subunit 5 of the COP9 signalosome (CSN), but the mechanism by which it strictly controls the pathogenicity of pathogenic fungi through autophagy remains unclear. Here, we found that Csn5 deficiency attenuated pathogenicity and enhanced autophagy in Magnaporthe oryzae. MoCSN5 knockout led to overubiquitination and overdegradation of MoTor (the core protein of the TORC1 complex [target of rapamycin]) thereby promoted autophagy. In addition, we identified MoCsn5 as a new interactor of MoAtg6. Atg6 was found to be ubiquitinated through linkage with lysine 48 (K48) in cells, which is necessary for infection-associated autophagy in pathogenic fungi. K48-ubiquitination of Atg6 enhanced its degradation and thereby inhibited autophagic activity. Our experimental results indicated that MoCsn5 promoted K48-ubiquitination of MoAtg6, which reduced the MoAtg6 protein content and thus inhibited autophagy. Aberrant ubiquitination and autophagy in ΔMocsn5 led to pleiotropic defects in the growth, development, stress resistance, and pathogenicity of M. oryzae. In summary, our study revealed a novel mechanism by which Csn5 regulates autophagy and pathogenicity in rice blast fungus through ubiquitination., (© 2024. The Author(s).)
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- 2024
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6. The MoLfa1 Protein Regulates Fungal Development and Septin Ring Formation in Magnaporthe oryzae .
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Wu JQ, Zhu XM, Bao JD, Wang JY, Yu XP, Lin FC, and Li L
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- Septins metabolism, Fungal Proteins metabolism, Cytoskeleton metabolism, Plant Diseases microbiology, Spores, Fungal metabolism, Gene Expression Regulation, Fungal, Magnaporthe physiology, Oryza metabolism, Ascomycota
- Abstract
Septins play a key regulatory role in cell division, cytokinesis, and cell polar growth of the rice blast fungus ( Magnaporthe oryzae ). We found that the organization of the septin ring, which is essential for appressorium-mediated infection in M. oryzae , requires long-chain fatty acids (LCFAs), which act as mediators of septin organization at membrane interfaces. However, it is unclear how septin ring formation and LCFAs regulate the pathogenicity of the rice blast fungus. In this study, a novel protein was named MoLfa1 because of its role in LCFAs utilization. MoLfa1 affects the utilization of LCFAs, lipid metabolism, and the formation of the septin ring by binding with phosphatidylinositol phosphates (PIPs), thereby participating in the construction of penetration pegs of M. oryzae . In addition, MoLfa1 is localized in the endoplasmic reticulum (ER) and interacts with the ER-related protein MoMip11 to affect the phosphorylation level of Mps1. (Mps1 is the core protein in the MPS1-MAPK pathway.) In conclusion, MoLfa1 affects conidia morphology, appressorium formation, lipid metabolism, LCFAs utilization, septin ring formation, and the Mps1-MAPK pathway of M. oryzae , influencing pathogenicity.
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- 2024
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7. Roles of CcDFR and CcOMT9 in the cyanidin biosynthesis and development of Cordyceps cicadae .
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Zeng Z, Zou Y, Cai W, Lin FC, and Wang H
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Introduction: Cordyceps cicadae is a traditional Chinese medicinal fungus known for its rich production of bioactive substances, particularly cyanidin, an anthocyanin commonly found in plants with notable anti-inflammatory, anti-tumor, antiviral, and antibacterial properties. This study revealed two key genes, CcDFR and CcOMT9 , affecting cyanidin biosynthesis in C. cicadae ., Methods: The roles of these genes in cyanidin production, growth, and development were elucidated through the gene knockout method, phenotypic analysis, transcriptomics, and metabolomics., Results: CcDFR deletion led to reduced cyanidin-3-O-glucoside (C3G), suppressed expression of cyanidin biosynthesis genes, impaired synnemata formation, decreased polysaccharide and adenosine content, and diminished chitinase activity. Meanwhile, the ΔCcOMT9 mutant exhibited an increase in C3G production, promoted expression of cyanidin biosynthesis genes and rising bioactive compounds, suppressed RNA methylation, and led to phenylalanine accumulation with no effect on fruiting body formation., Discussion: We revealed a distinct anthocyanin biosynthesis pathway in C. cicadae and identified two genes with opposite functions, laying the foundation for future genetic modification of cyanidin-producing strains using modern biological techniques. This will shorten the production period of this valuable compound, facilitating the industrial-scale production of cyanidin., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2024 Zeng, Zou, Cai, Lin and Wang.)
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- 2024
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8. SP-141 targets Trs85 to inhibit rice blast fungus infection and functions as a potential broad-spectrum antifungal agent.
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Wu XY, Dong B, Zhu XM, Cai YY, Li L, Lu JP, Yu B, Cheng JL, Xu F, Bao JD, Wang Y, Liu XH, and Lin FC
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- Fungal Proteins genetics, Fungal Proteins metabolism, Antifungal Agents pharmacology, Antifungal Agents therapeutic use, Antifungal Agents metabolism, Magnaporthe metabolism, Ascomycota, Indoles, Pyridines
- Abstract
Rice blast is a devastating disease worldwide, threatening rice production and food security. The blast fungus Magnaporthe oryzae invades the host via the appressorium, a specialized pressure-generating structure that generates enormous turgor pressure to penetrate the host cuticle. However, owing to ongoing evolution of fungicide resistance, it is vitally important to identify new targets and fungicides. Here, we show that Trs85, a subunit of the transport protein particle III complex, is essential for appressorium-mediated infection in M. oryzae. We explain how Trs85 regulates autophagy through Ypt1 (a small guanosine triphosphatase protein) in M. oryzae. We then identify a key conserved amphipathic α helix within Trs85 that is associated with pathogenicity of M. oryzae. Through computer-aided screening, we identify a lead compound, SP-141, that affects autophagy and the Trs85-Ypt1 interaction. SP-141 demonstrates a substantial capacity to effectively inhibit infection caused by the rice blast fungus while also exhibiting wide-ranging potential as an antifungal agent with broad-spectrum activity. Taken together, our data show that Trs85 is a potential new target and that SP-141 has potential for the control of rice blast. Our findings thus provide a novel strategy that may help in the fight against rice blast., (Copyright © 2023 The Author(s). Published by Elsevier Inc. All rights reserved.)
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- 2024
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9. The cell cycle, autophagy, and cell wall integrity pathway jointly governed by MoSwe1 in Magnaporthe oryzae.
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Li L, Zhu XM, Bao JD, Wang JY, Liu XH, and Lin FC
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- Cell Cycle, Autophagy, Cell Wall, Ascomycota
- Abstract
The cell cycle is pivotal to cellular differentiation in plant pathogenic fungi. Cell wall integrity (CWI) signaling plays an essential role in coping with cell wall stress. Autophagy is a degradation process in which cells decompose their components to recover macromolecules and provide energy under stress conditions. However, the specific association between cell cycle, autophagy and CWI pathway remains unclear in model pathogenic fungi Magnaporthe oryzae. Here, we have identified MoSwe1 as the conserved component of the cell cycle in the rice blast fungus. We have found that MoSwe1 targets MoMps1, a conserved critical MAP kinase of the CWI pathway, through protein phosphorylation that positively regulates CWI signaling. The CWI pathway is abnormal in the ΔMoswe1 mutant with cell cycle arrest. In addition, we provided evidence that MoSwe1 positively regulates autophagy by interacting with MoAtg17 and MoAtg18, the core autophagy proteins. Moreover, the S phase initiation was earlier, the morphology of conidia and appressoria was abnormal, and septum formation and glycogen degradation were impaired in the ΔMoswe1 mutant. Our research defines that MoSWE1 regulation of G1/S transition, CWI pathway, and autophagy supports its specific requirement for appressorium development and virulence in plant pathogenic fungi. Video Abstract., (© 2024. The Author(s).)
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- 2024
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10. Recent Advances in Effector Research of Magnaporthe oryzae .
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Wei YY, Liang S, Zhu XM, Liu XH, and Lin FC
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- Fungal Proteins metabolism, Magnaporthe metabolism, Oryza metabolism, Ascomycota metabolism
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Recalcitrant rice blast disease is caused by Magnaporthe oryzae , which has a significant negative economic reverberation on crop productivity. In order to induce the disease onto the host, M. oryzae positively generates many types of small secreted proteins, here named as effectors, to manipulate the host cell for the purpose of stimulating pathogenic infection. In M. oryzae , by engaging with specific receptors on the cell surface, effectors activate signaling channels which control an array of cellular activities, such as proliferation, differentiation and apoptosis. The most recent research on effector identification, classification, function, secretion, and control mechanism has been compiled in this review. In addition, the article also discusses directions and challenges for future research into an effector in M. oryzae .
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- 2023
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11. The biological functions of sphingolipids in plant pathogenic fungi.
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Zhu XM, Li L, Bao JD, Wang JY, Daskalov A, Liu XH, Del Poeta M, and Lin FC
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- Humans, Animals, Fungi metabolism, Signal Transduction physiology, Cell Membrane metabolism, Mammals, Sphingolipids chemistry, Sphingolipids metabolism, Plants metabolism
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Sphingolipids are critically significant in a range of biological processes in animals, plants, and fungi. In mammalian cells, they serve as vital components of the plasma membrane (PM) in maintaining its structure, tension, and fluidity. They also play a key role in a wide variety of biological processes, such as intracellular signal transduction, cell polarization, differentiation, and migration. In plants, sphingolipids are important for cell development and for cell response to environmental stresses. In pathogenic fungi, sphingolipids are crucial for the initiation and the development of infection processes afflicting humans. However, our knowledge on the metabolism and function of the sphingolipid metabolic pathway of pathogenic fungi affecting plants is still very limited. In this review, we discuss recent developments on sphingolipid pathways of plant pathogenic fungi, highlighting their uniqueness and similarity with plants and animals. In addition, we discuss recent advances in the research and development of fungal-targeted inhibitors of the sphingolipid pathway, to gain insights on how we can better control the infection process occurring in plants to prevent or/and to treat fungal infections in crops., Competing Interests: Maurizio Del Poeta is a co-Founder and Chief Scientific Officer (CSO) of MicroRid Technologies Inc., (Copyright: © 2023 Zhu et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2023
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12. The triglyceride catabolism regulated by a serine/threonine protein phosphatase, Smek1, is required for development and plant infection in Magnaporthe oryzae.
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Huang Z, Cao H, Wang H, Huang P, Wang J, Cai YY, Wang Q, Li Y, Wang J, Liu XH, Lin FC, and Lu J
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- Lipolysis, Fungal Proteins genetics, Fungal Proteins metabolism, Arabinose, Glycerol, Phosphoprotein Phosphatases genetics, Phosphoprotein Phosphatases metabolism, Carbon metabolism, Glucose metabolism, Glyoxylates, Fatty Acids, Threonine genetics, Threonine metabolism, Lipids, Serine metabolism, Gene Expression Regulation, Fungal, Plant Diseases microbiology, Spores, Fungal, Magnaporthe, Oryza microbiology
- Abstract
Magnaporthe oryzae is a pathogenic fungus that seriously harms rice production. Phosphatases and carbon metabolism play crucial roles in the growth and development of eukaryotes. However, it remains unclear how serine/threonine phosphatases regulate the catabolism of triglycerides, a major form of stored lipids. In this study, we identified a serine/threonine protein phosphatase regulatory subunit, Smek1, which is required for the growth, conidiation, and virulence of M. oryzae. Deletion of SMEK1 led to defects in the utilization of lipids, arabinose, glycerol, and ethanol. In glucose medium, the expression of genes involved in lipolysis, long-chain fatty acid degradation, β-oxidation, and the glyoxylate cycle increased in the Δsmek1 mutant, which is consistent with ΔcreA in which a carbon catabolite repressor CREA was deleted. In lipid medium, the expression of genes involved in long-chain fatty acid degradation, β-oxidation, the glyoxylate cycle, and utilization of arabinose, ethanol, or glycerol decreased in the Δsmek1 mutant, which is consistent with Δcrf1 in which a transcription activator CRF1 required for carbon metabolism was deleted. Lipase activity, however, increased in the Δsmek1 mutant in both glucose and lipid media. Moreover, Smek1 directly interacted with CreA and Crf1, and dephosphorylated CreA and Crf1 in vivo. The phosphatase Smek1 is therefore a dual-function regulator of the lipid and carbohydrate metabolism, and controls fungal development and virulence by coordinating the functions of CreA and Crf1 in carbon catabolite repression (CCR) and derepression (CCDR)., (© 2023 The Authors. Molecular Plant Pathology published by British Society for Plant Pathology and John Wiley & Sons Ltd.)
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- 2023
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13. MoVast2 combined with MoVast1 regulates lipid homeostasis and autophagy in Magnaporthe oryzae .
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Zhu XM, Li L, Bao JD, Wang JY, Liang S, Zhao LL, Huang CL, Yan JY, Cai YY, Wu XY, Dong B, Liu XH, Klionsky DJ, and Lin FC
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- Autophagy genetics, Homeostasis, Sphingolipids, Sterols metabolism, Lipids, Fungal Proteins metabolism, Plant Diseases microbiology, Magnaporthe genetics, Magnaporthe metabolism, Oryza genetics, Oryza microbiology
- Abstract
Macroautophagy/autophagy is an evolutionarily conserved biological process among eukaryotes that degrades unwanted materials such as protein aggregates, damaged mitochondria and even viruses to maintain cell survival. Our previous studies have demonstrated that MoVast1 acts as an autophagy regulator regulating autophagy, membrane tension, and sterol homeostasis in rice blast fungus. However, the detailed regulatory relationships between autophagy and VASt domain proteins remain unsolved. Here, we identified another VASt domain-containing protein, MoVast2, and further uncovered the regulatory mechanism of MoVast2 in M. oryzae . MoVast2 interacted with MoVast1 and MoAtg8, and colocalized at the PAS and deletion of MoVAST2 results in inappropriate autophagy progress. Through TOR activity analysis, sterols and sphingolipid content detection, we found high sterol accumulation in the Δ Movast2 mutant, whereas this mutant showed low sphingolipids and low activity of both TORC1 and TORC2. In addition, MoVast2 colocalized with MoVast1. The localization of MoVast2 in the MoVAST1 deletion mutant was normal; however, deletion of MoVAST2 leads to mislocalization of MoVast1. Notably, the wide-target lipidomic analyses revealed significant changes in sterols and sphingolipids, the major PM components, in the Δ Movast2 mutant, which was involved in lipid metabolism and autophagic pathways. These findings confirmed that the functions of MoVast1 were regulated by MoVast2, revealing that MoVast2 combined with MoVast1 maintained lipid homeostasis and autophagy balance by regulating TOR activity in M. oryzae .
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- 2023
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14. Transcriptomic and Metabolomic Investigation on Leaf Necrosis Induced by ZmWus2 Transient Overexpression in Nicotiana benthamiana .
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Zhang X, Liang S, Luo B, Zhou Z, Bao J, Fang R, Wang F, Song X, Liao Z, Chen G, Wang Y, Xu F, Teng Y, Li W, Xu S, and Lin FC
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- Plant Growth Regulators metabolism, Plant Proteins genetics, Plant Proteins metabolism, Gene Expression Regulation, Plant, Plant Leaves genetics, Plant Leaves metabolism, Transcription Factors genetics, Transcription Factors metabolism, Lipids, Nicotiana genetics, Nicotiana metabolism, Transcriptome
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WUSCHEL (WUS) is a crucial transcription factor in regulating plant stem cell development, and its expression can also improve genetic transformation. However, the ectopic expression of WUS always causes pleiotropic effects during genetic transformation, making it important to understand the regulatory mechanisms underlying these phenomena. In our study, we found that the transient expression of the maize WUS ortholog ZmWus2 caused severe leaf necrosis in Nicotiana benthamiana . We performed transcriptomic and non-target metabolomic analyses on tobacco leaves during healthy to wilted states after ZmWus2 transient overexpression. Transcriptomic analysis revealed that ZmWus2 transformation caused active metabolism of inositol trisphosphate and glycerol-3-phosphate, while also upregulating plant hormone signaling and downregulating photosystem and protein folding pathways. Metabolomic analysis mainly identified changes in the synthesis of phenylpropanoid compounds and various lipid classes, including steroid synthesis. In addition, transcription factors such as ethylene-responsive factors (ERFs), the basic helix-loop-helix (bHLH) factors, and MYBs were found to be regulated by ZmWus2 . By integrating these findings, we developed a WUS regulatory model that includes plant hormone accumulation, stress responses, lipid remodeling, and leaf necrosis. Our study sheds light on the mechanisms underlying WUS ectopic expression causing leaf necrosis and may inform the development of future genetic transformation strategies.
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- 2023
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15. MoCbp7, a Novel Calcineurin B Subunit-Binding Protein, Is Involved in the Calcium Signaling Pathway and Regulates Fungal Development, Virulence, and ER Homeostasis in Magnaporthe oryzae .
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Wang ZH, Shen ZF, Wang JY, Cai YY, Li L, Liao J, Lu JP, Zhu XM, Lin FC, and Liu XH
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- Virulence genetics, Calcineurin genetics, Calcineurin metabolism, Carrier Proteins metabolism, Calcium Signaling, Calcium metabolism, Fungal Proteins genetics, Fungal Proteins metabolism, Plant Diseases microbiology, Spores, Fungal, Magnaporthe physiology, Oryza metabolism
- Abstract
Calcineurin, a key regulator of the calcium signaling pathway, is involved in calcium signal transduction and calcium ion homeostasis. Magnaporthe oryzae is a devastating filamentous phytopathogenic fungus in rice, yet little is known about the function of the calcium signaling system. Here, we identified a novel calcineurin regulatory-subunit-binding protein, MoCbp7, which is highly conserved in filamentous fungi and was found to localize in the cytoplasm. Phenotypic analysis of the MoCBP7 gene deletion mutant (Δ Mocbp7 ) showed that MoCbp7 influenced the growth, conidiation, appressorium formation, invasive growth, and virulence of M. oryzae . Some calcium-signaling-related genes, such as YVC1 , VCX1 , and RCN1 , are expressed in a calcineurin/MoCbp7-dependent manner. Furthermore, MoCbp7 synergizes with calcineurin to regulate endoplasmic reticulum homeostasis. Our research indicated that M. oryzae may have evolved a new calcium signaling regulatory network to adapt to its environment compared to the fungal model organism Saccharomyces cerevisiae .
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- 2023
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16. Acyl-coenzyme A binding protein MoAcb1 regulates conidiation and pathogenicity in Magnaporthe oryzae .
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Cao N, Zhu XM, Bao JD, Zhu LH, Liu H, Lin FC, and Li L
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Magnaporthe oryzae is a filamentous fungus that causes rice blast. Rice blast seriously threatens the safety of food production. The normal synthesis and metabolism of fatty acids are extremely important for eukaryotes, and acyl-CoA is involved in fatty acid metabolism. Acyl-CoA binding (ACB) proteins specifically bind both medium-chain and long-chain acyl-CoA esters. However, the role of the Acb protein in plant-pathogenic fungi has not yet been investigated. Here, we identified MoAcb1, a homolog of the Acb protein in Saccharomyces cerevisiae . Disruption of MoACB1 causes delayed hyphal growth, significant reduction in conidial production and delayed appressorium development, glycogen availability, and reduced pathogenicity. Using immunoblotting and chemical drug sensitivity analysis, MoAcb1 was found to be involved in endoplasmic reticulum autophagy (ER-phagy). In conclusion, our results suggested that MoAcb1 is involved in conidia germination, appressorium development, pathogenicity and autophagy processes in M. oryzae ., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Cao, Zhu, Bao, Zhu, Liu, Lin and Li.)
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- 2023
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17. Model construction for height to crown base of Larix olgensis based on mixed-effects model and quantile regression.
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Yi D, Li FR, Ma AY, Lin FC, Hao YS, and Dong LH
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- Trees, Forests, Larix
- Abstract
Height to crown base is an important index reflecting the characteristics of tree crown. It is of great significance to accurately quantify height to crown base for forest management and increasing stand production. We used nonlinear regression to construct the height to crown base generalized basic model, and further extended that to the mixed-effects model and quantile regression model. The prediction ability of the models was evaluated and compared by the 'leave-one-out' cross-validate. Four sampling designs and different sampling sizes were used to calibrate the height to crown base model, and the best model calibration scheme was selected. The results showed that based on the height to crown base generalized model including tree height, diameter at breast height, basal area of the stand and average dominant height, the prediction accuracy of the expanded mixed-effects model and the combined three-quartile regression model were obviously improved. The mixed-effects model was slightly better than the combined three-quartile regression model, and the optimal sampling calibration scheme was to select five average trees. The mixed-effects model with five average trees was recommended to predict the height to crown base in practice.
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- 2023
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18. Current opinions on mitophagy in fungi.
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Shen ZF, Li L, Zhu XM, Liu XH, Klionsky DJ, and Lin FC
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- Humans, Animals, Mitochondria metabolism, Mitochondrial Membranes metabolism, Saccharomyces cerevisiae metabolism, Mammals, Mitophagy, Autophagy
- Abstract
Mitophagy, as one of the most important cellular processes to ensure quality control of mitochondria, aims at transporting damaged, aging, dysfunctional or excess mitochondria to vacuoles (plants and fungi) or lysosomes (mammals) for degradation and recycling. The normal functioning of mitophagy is critical for cellular homeostasis from yeasts to humans. Although the role of mitophagy has been well studied in mammalian cells and in certain model organisms, especially the budding yeast Saccharomyces cerevisiae , our understanding of its significance in other fungi, particularly in pathogenic filamentous fungi, is still at the preliminary stage. Recent studies have shown that mitophagy plays a vital role in spore production, vegetative growth and virulence of pathogenic fungi, which are very different from its roles in mammal and yeast. In this review, we summarize the functions of mitophagy for mitochondrial quality and quantity control, fungal growth and pathogenesis that have been reported in the field of molecular biology over the past two decades. These findings may help researchers and readers to better understand the multiple functions of mitophagy and provide new perspectives for the study of mitophagy in fungal pathogenesis. Abbreviations: AIM/LIR: Atg8-family interacting motif/LC3-interacting region; BAR: Bin-Amphiphysin-Rvs; BNIP3: BCL2 interacting protein 3; CK2: casein kinase 2; Cvt: cytoplasm-to-vacuole targeting; ER: endoplasmic reticulum; IMM: inner mitochondrial membrane; mETC: mitochondrial electron transport chain; OMM: outer mitochondrial membrane; OPTN: optineurin; PAS: phagophore assembly site; PD: Parkinson disease; PE: phosphatidylethanolamine; PHB2: prohibitin 2; PX: Phox homology; ROS, reactive oxygen species; TM: transmembrane.
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- 2023
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19. Role of the blue light receptor gene Icwc-1 in mycelium growth and fruiting body formation of Isaria cicadae .
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Song L, Shrivastava N, Gai Y, Li D, Cai W, Shen Y, Lin FC, Liu J, and Wang H
- Abstract
The Isaria cicadae , is well known highly prized medicinal mushroom with great demand in food and pharmaceutical industry. Due to its economic value and therapeutic uses, natural sources of wild I. cicadae are over-exploited and reducing continuously. Therefore, commercial cultivation in controlled environment is an utmost requirement to fulfill the consumer's demand. Due to the lack of knowledge on fruiting body (synnemata) development and regulation, commercial cultivation is currently in a difficult situation. In the growth cycle of macrofungi, such as mushrooms, light is the main factor affecting growth and development, but so far, specific effects of light on the growth and development of I. cicadae is unknown. In this study, we identified a blue light receptor white-collar-1 ( Icwc-1 ) gene homologue with well-defined functions in morphological development in I. cicadae based on gene knockout technology and transcriptomic analysis. It was found that the Icwc-1 gene significantly affected hyphal growth and fruiting body development. This study confirms that Icwc-1 acts as an upstream regulatory gene that regulates genes associated with fruiting body formation, pigment-forming genes, and related genes for enzyme synthesis. Transcriptome data analysis also found that Icwc-1 affects many important metabolic pathways of I. cicadae , i.e., amino acid metabolism and fatty acid metabolism. The above findings will not only provide a comprehensive understanding about the molecular mechanism of light regulation in I. cicadae , but also provide new insights for future breeding program and improving this functional food production., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Song, Shrivastava, Gai, Li, Cai, Shen, Lin, Liu and Wang.)
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- 2023
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20. A Subunit of the COP9 Signalosome, MoCsn6, Is Involved in Fungal Development, Pathogenicity, and Autophagy in Rice Blast Fungus.
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Shen ZF, Li L, Wang JY, Zhang YR, Wang ZH, Liang S, Zhu XM, Lu JP, Lin FC, and Liu XH
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- Virulence genetics, COP9 Signalosome Complex genetics, COP9 Signalosome Complex metabolism, Autophagy, Plant Diseases microbiology, Spores, Fungal genetics, Spores, Fungal metabolism, Gene Expression Regulation, Fungal, Fungal Proteins genetics, Fungal Proteins metabolism, Magnaporthe genetics
- Abstract
The COP9 signalosome (CSN) is a highly conserved protein complex in eukaryotes, affecting various development and signaling processes. To date, the biological functions of the COP9 signalosome and its subunits have not been determined in Magnaporthe oryzae. In this study, we characterized the CSN in M. oryzae (which we named MoCsn6) and analyzed its biological functions. MoCsn6 is involved in fungal development, autophagy, and plant pathogenicity. Compared with the wild-type strain 70-15, Δ Mocsn6 mutants showed a significantly reduced growth rate, sporulation rate, and germ tube germination rate. Pathogenicity assays showed that the Δ Mocsn6 mutants did not cause or significantly reduced the number of disease spots on isolated barley leaves. After the MoCSN6 gene was complemented into the Δ Mocsn6 mutant, vegetative growth, sporulation, and pathogenicity were restored. The Osm1 and Pmk1 phosphorylation pathways were also disrupted in the Δ Mocsn6 mutants. Furthermore, we found that MoCsn6 participates in the autophagy pathway by interacting with the autophagy core protein MoAtg6 and regulating its ubiquitination level. Deletion of MoCSN6 resulted in rapid lipidation of MoAtg8 and degradation of the autophagic marker protein green fluorescent protein-tagged MoAtg8 under nutrient and starvation conditions, suggesting that MoCsn6 negatively regulates autophagic activity. Taken together, our results demonstrate that MoCsn6 plays a crucial role in regulating fungal development, pathogenicity, and autophagy in M. oryzae. IMPORTANCE Magnaporthe oryzae, a filamentous fungus, is the cause of many cereal diseases. Autophagy is involved in fungal development and pathogenicity. The COP9 signalosome (CSN) has been extensively studied in ubiquitin pathways, but its regulation of autophagy has rarely been reported in plant-pathogenic fungi. Investigations on the relationship between CSN and autophagy will deepen our understanding of the pathogenic mechanism of M. oryzae and provide new insights into the development of new drug targets to control fungal diseases. In this study, the important function of Csn6 in the autophagy regulation pathway and its impact on the pathogenicity of M. oryzae were determined. We showed that Csn6 manages autophagy by interacting with the autophagy core protein Atg6 and regulating its ubiquitination level. Furthermore, future investigations that explore the function of CSN will deepen our understanding of autophagy mechanisms in rice blast fungus.
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- 2022
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21. Genome-Wide Analysis of AGC Kinases Reveals that MoFpk1 Is Required for Development, Lipid Metabolism, and Autophagy in Hyperosmotic Stress of the Rice Blast Fungus Magnaporthe oryzae.
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Wu MH, Yu Q, Tao TY, Sun LX, Qian H, Zhu XM, Li L, Liang S, Lu JP, Lin FC, and Liu XH
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- Lipid Metabolism, Autophagy genetics, Fungal Proteins genetics, Plant Diseases microbiology, Gene Expression Regulation, Fungal, Spores, Fungal genetics, Oryza microbiology, Magnaporthe genetics
- Abstract
During eukaryotic evolution, the TOR-AGC kinase signaling module is involved in the coordinated regulation of cell growth and survival. However, the AGC kinases in plant-pathogenic fungi remain poorly understood. In this study, we have identified 20 members of the AGC family of protein kinases. Evolutionary and biological studies have revealed that AGC kinases are highly conserved and involved in the growth (8 genes), conidiation (13 genes), conidial germination (9 genes), appressorium formation (9 genes), and pathogenicity (5 genes) of Magnaporthe oryzae, in which a subfamily protein of the AGC kinases, MoFpk1, the activator of flippase, specifically exhibited diverse roles. Two kinase sites were screened and found to be critical for MoFpk1: 230K and 326D. Moreover, MoFpk1 is involved in cell wall integrity through the negative regulation of MoMps1 phosphorylation. The deletion of MoFpk1 resulted in defective phosphatidylacetamide (PE) and phosphatidylserine (PS) turnover and a series of lipid metabolism disorders. Under hyperosmotic stress, since the Δ Mofpk1 mutant is unable to maintain membrane asymmetry, MoYpk1 phosphorylation and MoTor activity were downregulated, thus enhancing autophagy. Our results provide insights into the evolutionary and biological relationships of AGC kinases and new insight into plasma membrane (PM) homeostasis, i.e., responses to membrane stress and autophagy through lipid asymmetry maintenance. IMPORTANCE Our identification and analysis of evolutionary and biological relationships provide us with an unprecedented high-resolution view of the flexible and conserved roles of the AGC family in the topmost fungal pathogens that infect rice, wheat, barley, and millet. Guided by these insights, an AGC member, MoFpk1, was found to be indispensable for M. oryzae development. Our study defined a novel mechanism of plasma membrane homeostasis, i.e., adaptation to stress through the asymmetric distribution of phospholipids. Furthermore, defects in the asymmetric distribution of phospholipids in the membrane enhanced autophagy under hyperosmotic stress. This study provides a new mechanism for the internal linkage between lipid metabolism and autophagy, which may help new fungicide target development for controlling this devastating disease.
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- 2022
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22. GPI-Anchored Protein Homolog IcFBR1 Functions Directly in Morphological Development of Isaria cicadae .
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Li D, Gai Y, Meng J, Liu J, Cai W, Lin FC, and Wang H
- Abstract
Isaria cicadae is a famous edible and medicinal fungus in China and Asia. The molecular basis of morphogenesis and synnemal formation needs to be understood in more detail because this is the main source of biomass production in I. cicadae . In the present study, a fruiting body formation-related gene with a glycosylphosphatidylinositol (GPI) anchoring protein (GPI-Ap) gene homolog IcFBR1 was identified by screening random insertion mutants. Targeted deletion of IcFBR1 resulted in abnormal formation of synnemata, impairing aerial hyphae growth and sporulation. The IcFBR1 mutants were defective in the utilization of carbon sources with reduced polysaccharide contents and the regulation of amylase and protease activities. Transcriptome analysis of Δ Icfbr1 showed that IcFBR1 deletion influenced 49 gene ontology terms, including 23 biological processes, 9 molecular functions, and 14 cellular components. IcFBR1 is therefore necessary for regulating synnemal development, secondary metabolism, and nutrient utilization in this important edible and medicinal fungus. This is the first report illustrating that the function of IcFBR1 is associated with the synnemata in I. cicadae .
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- 2022
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23. The Plant Homeodomain Protein Clp1 Regulates Fungal Development, Virulence, and Autophagy Homeostasis in Magnaporthe oryzae.
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Wang J, Huang Z, Huang P, Wang Q, Li Y, Liu XH, Lin FC, and Lu J
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- Virulence, Plant Proteins genetics, Plant Proteins metabolism, Gene Expression Regulation, Fungal, Homeodomain Proteins genetics, Homeodomain Proteins metabolism, Fungal Proteins genetics, Fungal Proteins metabolism, Plant Diseases microbiology, Autophagy, Autophagy-Related Proteins genetics, Autophagy-Related Proteins metabolism, Nuclear Proteins metabolism, Homeostasis, Glycogen metabolism, Spores, Fungal, Magnaporthe genetics, Magnaporthe metabolism, Oryza genetics, Oryza metabolism, Oryza microbiology
- Abstract
Rice blast disease caused by Magnaporthe oryzae is a serious threat to global grain yield and food security. Cti6 is a nuclear protein containing a plant homeodomain (PHD) that is involved in transcriptional regulation in Saccharomyces cerevisiae. The biological function of its homologous protein in M. oryzae has been elusive. Here, we report Clp1 with a PHD domain in M. oryzae, a homologous protein of the yeast Cti6. Clp1 was mainly located in the nucleus and partly in the vesicles. Clp1 colocalized and interacted with the autophagy-related proteins Atg5, Atg7, Atg16, Atg24, and Atg28 at preautophagosomal structures (PAS) and autophagosomes, and the loss of Clp1 increased the fungal background autophagy level. Δ clp1 displayed reduced hyphal growth and hyperbranching, abnormal fungal morphology (including colony, spore, and appressorium), hindered appressorial glycogen metabolism and turgor production, weakened plant infection, and decreased virulence. The PHD is indispensable for the function of Clp1. Therefore, this study revealed that Clp1 regulates development and pathogenicity by maintaining autophagy homeostasis and affecting gene transcription in M. oryzae. IMPORTANCE The fungal pathogen Magnaporthe oryzae causes serious diseases of grasses such as rice and wheat. Autophagy plays an indispensable role in the pathogenic process of M. oryzae. Here, we report a Cti6-like protein, Clp1, that is involved in fungal development and infection of plants through controlling autophagy homeostasis in the cytoplasm and gene transcription in the nucleus in M. oryzae. This study will help us to understand an elaborated molecular mechanism of autophagy, gene transcription, and virulence in the rice blast fungus.
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- 2022
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24. The crucial role of the regulatory mechanism of the Atg1/ULK1 complex in fungi.
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Cai YY, Li L, Zhu XM, Lu JP, Liu XH, and Lin FC
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Autophagy, an evolutionarily conserved cellular degradation pathway in eukaryotes, is hierarchically regulated by autophagy-related genes (Atgs). The Atg1/ULK1 complex is the most upstream factor involved in autophagy initiation. Here,we summarize the recent studies on the structure and molecular mechanism of the Atg1/ULK1 complex in autophagy initiation, with a special focus on upstream regulation and downstream effectors of Atg1/ULK1. The roles of pathogenicity and autophagy aspects in Atg1/ULK1 complexes of various pathogenic hosts, including plants, insects, and humans, are also discussed in this work based on recent research findings. We establish a framework to study how the Atg1/ULK1 complex integrates the signals that induce autophagy in accordance with fungus to mammalian autophagy regulation pathways. This framework lays the foundation for studying the deeper molecular mechanisms of the Atg1 complex in pathogenic fungi., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Cai, Li, Zhu, Lu, Liu and Lin.)
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- 2022
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25. Transcription factors Vrf1 and Hox7 coordinately regulate appressorium maturation in the rice blast fungus Magnaporthe oryzae.
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Huang P, Wang J, Li Y, Wang Q, Huang Z, Qian H, Liu XH, Lin FC, and Lu J
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- Ascomycota, Chitin metabolism, Fungal Proteins genetics, Fungal Proteins metabolism, Gene Expression Regulation, Fungal, Glucans metabolism, Plant Diseases microbiology, Transcription Factors genetics, Transcription Factors metabolism, Magnaporthe metabolism, Oryza microbiology
- Abstract
Magnaporthe oryzae infects rice, wheat and other grass crops through appressoria. The formation of the appressorium is regulated by the external environment, signal transduction pathways, and transcription factors. Transcription factors Vrf1 and Hox7 are involved in the regulation of appressorium formation. In this study, we demonstrate that Vrf1 and Hox7 play vital roles in coordinately regulating appressorium maturation. In strain 70-15, deletion of VRF1 resulted in the inability to continue melanization and maturation of the incipient appressorium, and deletion of HOX7 also resulted in defects in appressorium melanization and maturation. The defects in appressorium formation in Δhox7Δvrf1 were similar to those in Δhox7 and Δvrf1. The gene expression profiles of the incipient appressoria at 5 h post-inoculation (hpi) showed that the expression levels of 704 genes (25.94 % of all differentially expressed genes in the three mutants) were significantly downregulated (606 genes) or upregulated (98 genes). In the appressoria of Δhox7, Δvrf1, and Δhox7Δvrf1 at 5 hpi, the expression level of genes related to cell wall remodeling was changed. Genes for melanin synthesis, chitin and glucan degradation, and extracellular cell wall degrading enzyme were significantly downregulated, while genes for chitin and glucan synthesis were upregulated. After 8 hpi, the incipient appressoria of Δhox7, Δvrf1, and Δhox7Δvrf1 regerminated and formed swollen hyphal-like structures with multiple nuclei. The ratio of the nuclear number of the hyphal-like structures of Δhox7, Δhox7Δvrf1, and Δvrf1 was close to 6:4:2 at 24 hpi. Therefore, although Vrf1 and Hox7 are somewhat functionally different, they synergistically regulate appressorium maturation in M. oryzae., (Copyright © 2022 Elsevier GmbH. All rights reserved.)
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- 2022
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26. An appressorium membrane protein, Pams1, controls infection structure maturation and virulence via maintaining endosomal stability in the rice blast fungus.
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Wang J, Wang Q, Huang P, Qu Y, Huang Z, Wang H, Liu XH, Lin FC, and Lu J
- Abstract
The rice blast fungus Magnaporthe oryzae spores differentiate and mature into functional appressoria by sensing the host surface signals. Environmental stimuli are transduced into cells through internalization during appressorium formation, such as in the cAMP-PKA pathway. Here, we describe a novel contribution to how appressoria mature on the surface of a leaf, and its connection to endosomes and the cAMP-PKA pathway. An appressorium membrane-specific protein, Pams1, is required for maintaining endosomal structure, appressorium maturation, and virulence in M. oryzae . During appressorium development, Pams1 was translocated from the cell membrane to the endosomal membrane. Deletion of PAMS1 led to the formation of two types of abnormal appressoria after 8 h post inoculation (hpi): melanized type I had a reduced virulence, while pale type II was dead. Before 8 hpi, Δ pams1 formed appressoria that were similar to those of the wild type. After 8 hpi, the appressoria of Δ pams1 was differentiated into two types: (1) the cell walls of type I appressoria were melanized, endosomes were larger, and had a different distribution from the wild type and (2) Type II appressoria gradually stopped melanization and began to die. The organelles, including the nucleus, endosomes, mitochondria, and endoplasmic reticula, were degraded, leaving only autophagic body-like vesicles in type II appressoria. The addition of exogenous cAMP to Δ pams1 led to the formation of a greater proportion of type I appressoria and a smaller proportion of type II appressoria. Thus, defects in endosomal structure and the cAMP-PKA pathway are among the causes of the defective appressorium maturation and virulence of Δ pams1 ., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Wang, Wang, Huang, Qu, Huang, Wang, Liu, Lin and Lu.)
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- 2022
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27. The peroxins BcPex8, BcPex10, and BcPex12 are required for the development and pathogenicity of Botrytis cinerea .
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Li L, Yu MX, Guo J, Hao ZN, Zhang Z, Lu ZQ, Wang JY, Zhu XM, Wang YL, Chen J, Sun GC, and Lin FC
- Abstract
Peroxisomes have been proved playing roles in infection of several plant pathogens. Although the contribution of a portion of peroxins in pathogenicity was demonstrated, most of them are undocumented in fungi, especially, Botrytis cinerea . The homologs of Pex8, Pex10, and Pex12 in B. cinerea were functionally characterized in this work using gene disruption strategies. Compared with the wild-type strain (WT), the Δ bcpex8 , Δ bcpex10 , and Δ bcpex12 mutants exhibited significant reduction in melanin production, fatty acid utilization, and decreased tolerance to high osmotic pressure and reactive oxygen species (ROS). The mycelial growth and conidiation of were significantly inhibited in Δ bcpex8 , Δ bcpex10 , and Δ bcpex12 strains. The mycelial growth rates of Δ bcpex8 , Δ bcpex10 , and Δ bcpex12 were reduced by 32, 35, and 34%, respectively, compared with WT and ectopic transformant (ET), and the conidiation was reduced by approximately 89, 27, and 88%, respectively. The conidial germination, germ tube elongation, and the formation of initiate infection structures (IFSs) were also reduced by the deletion of the genes. The pathogenicity was tested on the leaves of tobacco and strawberry, and fruits of tomato. On the leaves of tobacco and strawberry, the Δ bcpex8 , Δ bcpex10 , and Δ bcpex12 mutants could not induce necrotic lesions, and the lesions on tomato fruits infected with the mutants were significantly reduced than those of the wide type. The results indicated that BcPEX8 , BcPEX10 , and BcPEX12 are indispensable for the development and pathogenicity of B . cinerea ., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Li, Yu, Guo, Hao, Zhang, Lu, Wang, Zhu, Wang, Chen, Sun and Lin.)
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- 2022
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28. De Novo Purine Nucleotide Biosynthesis Pathway Is Required for Development and Pathogenicity in Magnaporthe oryzae .
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Liu MY, Sun LX, Qian H, Zhang YR, Zhu XM, Li L, Liang S, Lu JP, Lin FC, and Liu XH
- Abstract
Purine nucleotides are indispensable compounds for many organisms and participate in basic vital activities such as heredity, development, and growth. Blocking of purine nucleotide biosynthesis may inhibit proliferation and development and is commonly used in cancer therapy. However, the function of the purine nucleotide biosynthesis pathway in the pathogenic fungus Magnaporthe oryzae is not clear. In this study, we focused on the de novo purine biosynthesis (DNPB) pathway and characterized MoAde8, a phosphoribosylglycinamide formyltransferase, catalyzing the third step of the DNPB pathway in M. oryzae . MoAde8 was knocked out, and the mutant (∆ Moade8 ) exhibited purine auxotroph, defects in aerial hyphal growth, conidiation, and pathogenicity, and was more sensitive to hyperosmotic stress and oxidative stress. Moreover, ∆ Moade8 caused decreased activity of MoTor kinase due to blocked purine nucleotide synthesis. The autophagy level was also impaired in ∆ Moade8 . Additionally, MoAde5, 7, 6, and 12, which are involved in de novo purine nucleotide biosynthesis, were also analyzed, and the mutants showed defects similar to the defects of ∆ Moade8 . In summary, de novo purine nucleotide biosynthesis is essential for conidiation, development, and pathogenicity in M. oryzae .
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- 2022
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29. The LAMMER Kinase MoKns1 Regulates Growth, Conidiation and Pathogenicity in Magnaporthe oryzae .
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Li L, Zhu XM, Wu JQ, Cao N, Bao JD, Liu XH, and Lin FC
- Subjects
- Ascomycota, Fungal Proteins genetics, Fungal Proteins metabolism, Gene Expression Regulation, Fungal, Plant Diseases, Spores, Fungal, Virulence genetics, Magnaporthe, Oryza metabolism
- Abstract
Magnaporthe oryzae is an important pathogen that causes a devastating disease in rice. It has been reported that the dual-specificity LAMMER kinase is conserved from yeast to animal species and has a variety of functions. However, the functions of the LAMMER kinase have not been reported in M. oryzae . In this study, we identified the unique LAMMER kinase MoKns1 and analyzed its function in M. oryzae . We found that in a MoKNS1 deletion mutant, growth and conidiation were primarily decreased, and pathogenicity was almost completely lost. Furthermore, our results found that MoKns1 is involved in autophagy. The Δ Mokns1 mutant was sensitive to rapamycin, and MoKns1 interacted with the autophagy-related protein MoAtg18. Compared with the wild-type strain 70-15, autophagy was significantly enhanced in the Δ Mokns1 mutant. In addition, we also found that MoKns1 regulated DNA damage stress pathways, and the Δ Mokns1 mutant was more sensitive to hydroxyurea (HU) and methyl methanesulfonate (MMS) compared to the wild-type strain 70-15. The expression of genes related to DNA damage stress pathways in the Δ Mokns1 mutant was significantly different from that in the wild-type strain. Our results demonstrate that MoKns1 is an important pathogenic factor in M. oryzae involved in regulating autophagy and DNA damage response pathways, thus affecting virulence. This research on M. oryzae pathogenesis lays a foundation for the prevention and control of M. oryzae .
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- 2022
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30. A kelch domain cell end protein, PoTea1, mediates cell polarization during appressorium morphogenesis in Pyricularia oryzae.
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Qu Y, Cao H, Huang P, Wang J, Liu X, Lu J, and Lin FC
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- Ascomycota, Fungal Proteins genetics, Fungal Proteins metabolism, Kelch Repeat, Morphogenesis, Plant Diseases microbiology, Spores, Fungal, Magnaporthe, Oryza microbiology
- Abstract
The rice blast fungus Pyricularia oryzae differentiates into an infection structure, called an appressorium, for plant penetration. The process of appressorium formation requires the transformation of polarized growth to isotropic growth, while penetration requires the opposite growth transformation from isotropic to polarized. Polarized growth requires coordinated organization of cytoskeletal elements, such as microtubule and actin. We identified PoTea1, a homolog of Tea1 from Schizosaccharomyces pombe, and characterized its roles in P. oryzae. After PoTEA1 deletion, ∆Potea1 displayed slowed hyphal growth, decreased sporulation, increased hyphal branches, abnormal two-celled spores, and reduced plant penetration and virulence. During appressorium formation, ∆Potea1 developed a long germ tube with a small appressorium, leading to delayed appressorium differentiation and reduced glycogen and lipid droplet degradation. ∆Potea1 is defective in cAMP-PKA and Pmk1 MAPK pathways. PoTea1 localized at hyphal tips and appressoria as bright dots and was highly dynamic during appressorium formation. PoTea1 formed a complex with itself by self-assembly that was highly dependent on its kelch motif. The coiled-coil motif C2 of PoTea1 is involved in self polymerization and appressorium formation. Benomyl and latrunculin A, two cytoskeleton inhibitors, disturbed the stable localization of PoTea1 at vegetative hyphal tips. We speculate that PoTea1 functions in appressorium formation and virulence by mediating cell polarity in P. oryzae., (Copyright © 2022 Elsevier GmbH. All rights reserved.)
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- 2022
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31. Research on the Molecular Interaction Mechanism between Plants and Pathogenic Fungi.
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Li L, Zhu XM, Zhang YR, Cai YY, Wang JY, Liu MY, Wang JY, Bao JD, and Lin FC
- Subjects
- Plant Diseases microbiology, Plant Immunity, Virulence Factors, Fungi, Plants microbiology
- Abstract
Plant diseases caused by fungi are one of the major threats to global food security and understanding the interactions between fungi and plants is of great significance for plant disease control. The interaction between pathogenic fungi and plants is a complex process. From the perspective of pathogenic fungi, pathogenic fungi are involved in the regulation of pathogenicity by surface signal recognition proteins, MAPK signaling pathways, transcription factors, and pathogenic factors in the process of infecting plants. From the perspective of plant immunity, the signal pathway of immune response, the signal transduction pathway that induces plant immunity, and the function of plant cytoskeleton are the keys to studying plant resistance. In this review, we summarize the current research progress of fungi-plant interactions from multiple aspects and discuss the prospects and challenges of phytopathogenic fungi and their host interactions.
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- 2022
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32. A New Species in Pseudophialophora From Wild Rice and Beneficial Potential.
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Zhu JN, Yu YJ, Dai MD, Zeng YL, Lu XJ, Wang L, Liu XH, Su ZZ, and Lin FC
- Abstract
Wild rice ( Oryza granulata ) is a natural resource pool containing abundant unknown endophytic fungi species. There are few reports on the endophytic fungi in wild rice. Here, one isolate recovered from wild rice roots was identified as a new species Pseudophialophora oryzae sp. nov based on the molecular phylogeny and morphological characteristics. Fluorescent protein-expressing P. oryzae was used to monitor the fungal colonization pattern. Hyphae invaded the epidermis to the inner cortex but not into the root stele. The inoculation of P. oryzae promoted the rice growth, with the growth parameters of chlorophyll content, shoot height, root length, fresh shoot weight, fresh root weight and dry weight increasing by 24.10, 35.32, 19.35, 90.00, 33.3, and 79.17%, respectively. P. oryzae induced up-regulation of nitrate transporter OsPTR9 and potassium transporter OsHAK16 by 7.28 ± 0.84 and 2.57 ± 0.80 folds, promoting nitrogen and potassium elements absorption. In addition, P. oryzae also conferred a systemic resistance against rice blast, showing a 72.65 and 75.63% control rate in sterile plates and potting conditions. This systemic resistance was mediated by the strongly up-regulated expression of resistance-related genes NAC , OsSAUR2 , OsWRKY71 , EL5 , and PR1 α. Since P. oryzae can promote rice growth, biomass and induce systemic disease resistance, it can be further developed as a new biogenic agent for agricultural production, providing a new approach for biocontrol of rice blast., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Zhu, Yu, Dai, Zeng, Lu, Wang, Liu, Su and Lin.)
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- 2022
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33. Endosomal sorting complexes required for transport-0 (ESCRT-0) are essential for fungal development, pathogenicity, autophagy and ER-phagy in Magnaporthe oryzae.
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Sun LX, Qian H, Liu MY, Wu MH, Wei YY, Zhu XM, Lu JP, Lin FC, and Liu XH
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- Ascomycota, Autophagy genetics, Endosomal Sorting Complexes Required for Transport genetics, Fungal Proteins genetics, Fungal Proteins metabolism, Plant Diseases microbiology, Spores, Fungal metabolism, Virulence, Magnaporthe metabolism, Oryza microbiology
- Abstract
Magnaporthe oryzae is an important plant pathogen that causes rice blast. Hse1 and Vps27 are components of ESCRT-0 involved in the multivesicular body (MVB) sorting pathway and biogenesis. To date, the biological functions of ESCRT-0 in M. oryzae have not been determined. In this study, we identified and characterized Hse1 and Vps27 in M. oryzae. Disruption of MoHse1 and MoVps27 caused pleiotropic defects in growth, conidiation, sexual development and pathogenicity, thereby resulting in loss of virulence in rice and barley leaves. Disruption of MoHse1 and MoVps27 triggered increased lipidation of MoAtg8 and degradation of GFP-MoAtg8, indicating that ESCRT-0 is involved in the regulation of autophagy. ESCRT-0 was determined to interact with coat protein complex II (COPII), a regulator functioning in homeostasis of the endoplasmic reticulum (ER homeostasis), and disruption of MoHse1 and MoVps27 also blocked activation of the unfolded protein response (UPR) and autophagy of the endoplasmic reticulum (ER-phagy). Overall, our results indicate that ESCRT-0 plays critical roles in regulating fungal development, virulence, autophagy and ER-phagy in M. oryzae., (© 2021 Society for Applied Microbiology and John Wiley & Sons Ltd.)
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- 2022
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34. MoOpy2 is essential for fungal development, pathogenicity, and autophagy in Magnaporthe oryzae.
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Cai YY, Wang JY, Wu XY, Liang S, Zhu XM, Li L, Lu JP, Liu XH, and Lin FC
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- Ascomycota, Autophagy genetics, Fungal Proteins metabolism, Gene Expression Regulation, Fungal, Plant Diseases microbiology, Spores, Fungal metabolism, Virulence genetics, Magnaporthe metabolism, Oryza microbiology
- Abstract
The development and pathogenicity of the fungus Magnaporthe oryzae, the causal agent of destructive rice blast disease, require it to perceive external environmental signals. Opy2, an overproduction-induced pheromone-resistant protein 2, is a crucial protein for sensing external signals in Saccharomyces cerevisiae. However, the biological functions of the homologue of Opy2 in M. oryzae are unclear. In this study, we identified that MoOPY2 is involved in fungal development, pathogenicity, and autophagy in M. oryzae. Deletion of MoOPY2 resulted in pleiotropic defects in hyphal growth, conidiation, germ tube extension, appressorium formation, appressorium turgor generation, and invasive growth, therefore leading to attenuated pathogenicity. Furthermore, MoOpy2 participates in the Osm1 MAPK pathway and the Mps1 MAPK pathway by interacting with the adaptor protein Mst50. The interaction sites of Mst50 and MoOpy2 colocalized with the autophagic marker protein MoAtg8 in the preautophagosomal structure sites (PAS). Notably, the ΔMoopy2 mutant caused cumulative MoAtg8 lipidation and rapid GFP-MoAtg8 degradation in response to nitrogen starvation, showing that MoOpy2 is involved in the negative regulation of autophagy activity. Taken together, our study revealed that MoOpy2 of M. oryzae plays an essential role in the orchestration of fungal development, appressorium penetration, autophagy and pathogenesis., (© 2022 Society for Applied Microbiology and John Wiley & Sons Ltd.)
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- 2022
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35. Melanin Promotes Spore Production in the Rice Blast Fungus Magnaporthe oryzae .
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Huang P, Cao H, Li Y, Zhu S, Wang J, Wang Q, Liu X, Lin FC, and Lu J
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The rice blast pathogen, Magnaporthe oryzae , spreads through spores and invades rice through appressoria. Melanin is necessary for an appressorium to penetrate plant cells, but there are many unknown aspects of its role in fungal conidiation. In this study, we confirmed that melanin promotes spore production in M. oryzae , and that this effect is related to the background melanin content of wild-type strains. In the wild-type 70-15 strain with low melanin content of aerial hyphae, increased melanin synthesis promoted sporulation. In contrast, increased melanin synthesis in the wild-type Guy11 strain, which has higher melanin content, did not promote sporulation. The transcription factor Cnf1 (conidial production negative regulatory factor 1), which negatively regulates melanin synthesis, has opposite effects in conidiophore differentiation of Guy11 and 70-15. Deletion of CNF1 did not abolish the defects of Δ cos1 and Δ hox2 (where COS1 /conidiophore stalk-less 1 or HOX2 /homeodomain protein 2 was deleted) in conidiation, while increased the conidiation of Δ gcc1 and Δ gcf3 (where GCC1 /growth, conidiation and cell wall regulatory factor 1, or GCF3 /growth and conidiation regulatory factor 3 was deleted). Pig1 (pigment of Magnaporthe 1) regulates the melanin synthesis of hyphae but not of conidiophores, spores, or appressoria. Deletion of the same gene in different wild-type strains can lead to different phenotypes, partly because of differences in melanin content between fungal strains. Overall, this study reveals the functional diversity and complexity of melanin in different M. oryzae strains., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Huang, Cao, Li, Zhu, Wang, Wang, Liu, Lin and Lu.)
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- 2022
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36. A Putative D-Arabinono-1,4-lactone Oxidase, MoAlo1, Is Required for Fungal Growth, Conidiogenesis, and Pathogenicity in Magnaporthe oryzae .
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Wu MH, Huang LY, Sun LX, Qian H, Wei YY, Liang S, Zhu XM, Li L, Lu JP, Lin FC, and Liu XH
- Abstract
Magnaporthe oryzae is the causal agent of rice blast outbreaks. L-ascorbic acid (ASC) is a famous antioxidant found in nature. However, while ASC is rare or absent in fungi, a five-carbon analog, D-erythroascorbic acid (EASC), seems to appear to be a substitute for ASC. Although the antioxidant function of ASC has been widely described, the specific properties and physiological functions of EASC remain poorly understood. In this study, we identified a D-arabinono-1,4-lactone oxidase (ALO) domain-containing protein, MoAlo1, and found that MoAlo1 was localized to mitochondria. Disruption of MoALO1 (Δ Moalo1 ) exhibited defects in vegetative growth as well as conidiogenesis. The Δ Moalo1 mutant was found to be more sensitive to exogenous H
2 O2 . Additionally, the pathogenicity of conidia in the Δ Moalo1 null mutant was reduced deeply in rice, and defective penetration of appressorium-like structures (ALS) formed by the hyphal tips was also observed in the Δ Moalo1 null mutant. When exogenous EASC was added to the conidial suspension, the defective pathogenicity of the Δ Moalo1 mutant was restored. Collectively, MoAlo1 is essential for growth, conidiogenesis, and pathogenicity in M. oryzae.- Published
- 2022
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37. Insights of roles played by septins in pathogenic fungi.
- Author
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Li L, Zhu XM, Su ZZ, Del Poeta M, Liu XH, and Lin FC
- Subjects
- Autophagy, Cell Cycle, Cell Division, Endocytosis, Fungi metabolism, Host-Pathogen Interactions, Fungal Proteins genetics, Fungal Proteins metabolism, Fungi pathogenicity, Septins genetics, Septins metabolism
- Abstract
Septins, a conserved family of GTP-binding proteins, are widely recognized as an essential cytoskeletal component, playing important roles in a variety of biological processes, including division, polarity, and membrane remodeling, in different eukaryotes. Although the roles played by septins were identified in the model organism Saccharomyces cerevisiae , their importance in other fungi, especially pathogenic fungi, have recently been determined. In this review, we summarize the functions of septins in pathogenic fungi in the cell cycle, autophagy, endocytosis and invasion host-microbe interactions that were reported in the last two years in the field of septin cell biology. These new discoveries may be expanded to investigate the functions of septin proteins in fungal pathogenesis and may be of wide interest to the readers of Microbiology and Molecular Pathology.
- Published
- 2021
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38. MAT Loci Play Crucial Roles in Sexual Development but Are Dispensable for Asexual Reproduction and Pathogenicity in Rice Blast Fungus Magnaporthe oryzae .
- Author
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Wang JY, Wang SZ, Zhang Z, Hao ZN, Shi XX, Li L, Zhu XM, Qiu HP, Chai RY, Wang YL, Li L, Liu XH, Feng XX, Sun GC, and Lin FC
- Abstract
Magnaporthe oryzae , a fungal pathogen that causes rice blast, which is the most destructive disease of rice worldwide, has the potential to perform both asexual and sexual reproduction. MAT loci, consisting of MAT genes, were deemed to determine the mating types of M. oryzae strains. However, investigation was rarely performed on the development and molecular mechanisms of the sexual reproduction of the fungus. In the present work, we analyzed the roles of two MAT loci and five individual MAT genes in the sex determination, sexual development and pathogenicity of M. oryzae . Both of the MAT1-1 and MAT1-2 loci are required for sex determination and the development of sexual structures. MAT1-1-1 , MAT1-1-3 and MAT1-2-1 genes are crucial for the formation of perithecium. MAT1-1-2 impacts the generation of asci and ascospores, while MAT1-2-2 is dispensable for sexual development. A GFP fusion experiment indicated that the protein of MAT1-1-3 is distributed in the nucleus. However, all of the MAT loci or MAT genes are dispensable for vegetative growth, asexual reproduction, pathogenicity and pathogenicity-related developments of the fungus, suggesting that sexual reproduction is regulated relatively independently in the development of the fungus. The data and methods of this work may be helpful to further understand the life cycle and the variation of the fungus.
- Published
- 2021
- Full Text
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39. Dark septate endophyte Falciphora oryzae-assisted alleviation of cadmium in rice.
- Author
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Su ZZ, Dai MD, Zhu JN, Liu XH, Li L, Zhu XM, Wang JY, Yuan ZL, and Lin FC
- Subjects
- Cadmium toxicity, Endophytes genetics, Plant Roots chemistry, Ascomycota, Oryza, Soil Pollutants analysis, Soil Pollutants toxicity
- Abstract
Dark septate endophytes (DSEs) are the typical representatives of root endophytic fungi in heavy metal (HM)-contaminated environments. However, little is known about their roles in the HMs tolerance of hosts and the underlying mechanism. Here, we investigated the biological roles and molecular mechanisms of a DSE strain Falciphora oryzae in alleviating cadmium (Cd) toxicities in rice. It was found that F. oryzae possessed a capacity of accumulating Cd in its vacuoles and chlamydospores. During symbiosis, F. oryzae conferred improved Cd tolerance to rice, decreasing Cd accumulation in roots and translocation to shoots. F. oryzae alleviated Cd toxicity to rice by sequestering Cd in its vacuoles. Further application of F. oryzae as fertilizer in the field could reduce Cd content in rice grains. We identified a SNARE Syntaxin 1 gene through proteomics, which participated in Cd tolerance of F. oryzae by regulating chlamydospore formation and vacuole enlargement. This study provided novel insights into how the DSEs and their host plants combat Cd stress., (Copyright © 2021 Elsevier B.V. All rights reserved.)
- Published
- 2021
- Full Text
- View/download PDF
40. A VASt-domain protein regulates autophagy, membrane tension, and sterol homeostasis in rice blast fungus.
- Author
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Zhu XM, Li L, Cai YY, Wu XY, Shi HB, Liang S, Qu YM, Naqvi NI, Del Poeta M, Dong B, Lin FC, and Liu XH
- Subjects
- Ascomycota, Autophagy genetics, Fungal Proteins genetics, Fungal Proteins metabolism, Homeostasis, Plant Diseases microbiology, Sterols metabolism, Magnaporthe genetics, Oryza microbiology
- Abstract
Sterols are a class of lipids critical for fundamental biological processes and membrane dynamics. These molecules are synthesized in the endoplasmic reticulum (ER) and are transported bi-directionally between the ER and plasma membrane (PM). However, the trafficking mechanism of sterols and their relationship with macroautophagy/autophagy are still poorly understood in the rice blast fungus Magnaporthe oryzae . Here, we identified the VAD1 Analog of StAR-related lipid transfer (VASt) domain-containing protein MoVast1 via co-immunoprecipitation in M. oryzae . Loss of MoVAST1 resulted in conidial defects, impaired appressorium development, and reduced pathogenicity. The MoTor (target of rapamycin in M. oryzae ) activity is inhibited because MoVast1 deletion leads to high levels of sterol accumulation in the PM. Site-directed mutagenesis showed that the 902 T site is essential for localization and function of MoVast1. Through filipin or Flipper-TR staining, autophagic flux detection, MoAtg8 lipidation, and drug sensitivity assays, we uncovered that MoVast1 acts as a novel autophagy inhibition factor that monitors tension in the PM by regulating the sterol content, which in turn modulates the activity of MoTor. Lipidomics and transcriptomics analyses further confirmed that MoVast1 is an important regulator of lipid metabolism and the autophagy pathway. Our results revealed and characterized a novel sterol transfer protein important for M. oryzae pathogenicity. Abbreviations: AmB: amphotericin B; ATMT: Agrobacterium tumefaciens -mediated transformation; CM: complete medium; dpi: days post-inoculation; ER: endoplasmic reticulum; Flipper-TR: fluorescent lipid tension reporter; GO: Gene ontology; hpi: hours post-inoculation; IH: invasive hyphae; KEGG: kyoto encyclopedia of genes and genomes; MoTor: target of rapamycin in Magnaporthe oryzae ; PalmC: palmitoylcarnitine; PM: plasma membrane; SD-N: synthetic defined medium without amino acids and ammonium sulfate; TOR: target of rapamycin; VASt: VAD1 Analog of StAR-related lipid transfer; YFP, yellow fluorescent protein.
- Published
- 2021
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41. An efficient genetic manipulation protocol for dark septate endophyte Falciphora oryzae.
- Author
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Su ZZ, Dai MD, Zhu JN, Zeng YL, Lu XJ, Liu XH, and Lin FC
- Subjects
- Recombinant Fusion Proteins genetics, Symbiosis genetics, Ascomycota genetics, Ascomycota metabolism, Endophytes genetics, Endophytes metabolism, Protoplasts metabolism, Transfection methods
- Abstract
Objective: To investigate the protoplast preparation and transformation system of endophytic fungus Falciphora oryzae., Results: F. oryzae strain obtained higher protoplast yield and effective transformation when treated with enzyme digestion solution containing 0.9 M KCl solution and 10 mg mL
-1 glucanase at 30 °C with shaking at 80 rpm for 2-3 h. When the protoplasts were plated on a regenerations-agar medium containing 1 M sucrose, the re-growth rate of protoplasts was the highest. We successfully acquired green fluorescent protein-expressing transformants by transforming the pKD6-GFP vector into protoplasts. Further, the GFP expression in fungal hyphae possessed good stability and intensity during symbiosis in rice roots., Conclusions: This study provided a protoplast transformation system of F. oryzae, creating opportunities for future genetic research in other endophytic fungi., (© 2021. The Author(s), under exclusive licence to Springer Nature B.V.)- Published
- 2021
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42. PoRal2 Is Involved in Appressorium Formation and Virulence via Pmk1 MAPK Pathways in the Rice Blast Fungus Pyricularia oryzae .
- Author
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Qu Y, Wang J, Huang P, Liu X, Lu J, and Lin FC
- Abstract
Pyricularia oryzae is an important plant pathogenic fungus that can severely damage rice and wheat crops, leading to significant reductions in crop productivity. To penetrate into and invade tissues of its plant host, this fungus relies on an invasive structure known as an appressorium. Appressorium formation is rigorously regulated by the cAMP-PKA and Pmk1 MAPK pathways. Here, we identified PoRal2, a homologous protein of Schizosaccharomyces pombe Ral2, and characterized its roles in fungal development and virulence in P. oryzae . PoRal2 contains N-terminal kelch repeats and C-terminal BTB domains. PoRal2 is involved in sporulation, aerial hypha and conidiophore differentiation, appressorium formation, plant penetration, and virulence. During appressorium formation, ∆ Poral2 mutants generate appressoria with long germ tubes on hydrophobic surfaces. ∆ Poral2 mutants exhibited a defective response to exogenous cAMP and the activated RAS2
G18V on a hydrophilic surface, indicating impairment in the cAMP-PKA or Pmk1 MAPK signaling pathways. Deletion of PoRAL2 leads to lowered Pmk1 phosphorylation level in the mutant. Moreover, PoRal2 is found to interact with Scd1, Smo1, and Mst50, which are involved in activation of Pmk1. In addition, the expression levels of MPG1 , WISH , and PDEH in the cAMP-PKA pathway, RAS2 in both the cAMP-PKA and Pmk1 MAPK pathways, and melanin biosynthesis genes ( ALB1 , BUF1 , and RSY1 ) were significantly down-regulated in the ∆ Poral2 . Therefore, PoRal2 is involved in fungal development and virulence by its crosstalk in the cAMP-PKA and Pmk1 MAPK signaling pathways., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Qu, Wang, Huang, Liu, Lu and Lin.)- Published
- 2021
- Full Text
- View/download PDF
43. The chitin deacetylase PoCda7 is involved in the pathogenicity of Pyricularia oryzae.
- Author
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Dai MD, Wu M, Li Y, Su ZZ, Lin FC, and Liu XH
- Subjects
- Amidohydrolases genetics, Amino Acid Sequence, Ascomycota genetics, Ascomycota growth & development, Cell Wall metabolism, Chitin metabolism, Fungal Proteins genetics, Gene Expression Regulation, Fungal, Oryza metabolism, Sequence Alignment, Spores, Fungal enzymology, Spores, Fungal genetics, Spores, Fungal growth & development, Virulence, Amidohydrolases metabolism, Ascomycota enzymology, Ascomycota pathogenicity, Fungal Proteins metabolism, Oryza microbiology, Plant Diseases microbiology
- Abstract
The fungal cell wall plays an essential role in maintaining cellular integrity and facing complex and changing environmental conditions. Whether a fungus successfully invades a host depends on whether it evades the plant's innate immune system, which recognizes the conserved components of the fungal cell wall, such as chitin. Fungi developed infection-related changes in cell wall composition in co-evolution with nature to solve this problem. One of the changes is the deacetylation of chitin by chitin deacetylase (CDA) to produce a polysaccharide that influences the infection of pathogenic fungi. The present study revealed the functions of PoCda7, a chitin deacetylase in Pyricularia oryzae. Phenotype analysis revealed that the knockout mutant of ΔPocda7 had no significant effect on fungal morphogenic development, including conidiation, germination, appressorial formation and cell wall of conidium and hyphae but was sensitive to reactive oxygen species. Glycerols are necessary to generate sufficient turgor in appressoria for invading the host surface. As a result of the decreased appressorium turgor pressure and decreased appressorium-mediated invasion, the fungal virulence of ΔPocda7 was significantly reduced in host plants. PoCda7 inhibited the cell death of leaves in Nicotiana benthamiana. Additionally, the expression of PoCDA7 was repressed in the early stage of infection. Subcellular localization experiments showed that PoCda7 was localized in the cell wall, and its fluorescence transferred to the EIHM and BIC when the rice blast fungus infected the rice leaf sheath, which was referred to as a candidate apoplastic effector in P. oryzae., (Copyright © 2021 Elsevier GmbH. All rights reserved.)
- Published
- 2021
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44. A Novel Species of Penicillium With Inhibitory Effects Against Pyricularia oryzae and Fungal Pathogens Inducing Citrus Diseases.
- Author
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Liang LJ, Jeewon R, Dhandevi P, Durairajan SSK, Li H, Lin FC, and Wang HK
- Subjects
- Ascomycota, China, Colletotrichum, Fusarium, Phylogeny, Plant Diseases, Rhizoctonia, Tibet, Citrus, Penicillium genetics
- Abstract
A novel species of Penicillium , proposed as P . linzhiense sp.nov was isolated from soil collected in Linzhi Town, Linzhi County, Tibet Autonomous Region, China. DNA sequence analyses from eight different gene regions indicate that the isolate represents a novel species and most closely related to P . janczewskii . The phylogenetic analysis based on a concatenated dataset of three genes, ITS, CaM , and BenA , also confirmed the placement of the novel species within the Canescentia section of the genus Penicillium . Differences in morphology among similar species are detailed and single gene phylogenies based on ITS, CaM and BenA genes as well as a multi-loci gene phylogeny are presented. Cultural studies were performed to study inhibitory activities on plant pathogens. The results reveal a notable antifungal activity against Pyricularia oryzae causing rice blast with an inhibition rate up to 77%, while for other three citrus pathogens, Diaporthe citri , Phyllosticta citrichinaensis , and Colletotrichum gloeosporioides , inhibition rate was 40, 50, and 55% respectively. No noticeable effects were observed for Fusarium graminearum , Botryosphaeria kuwatsukai , and Rhizoctonia solani . Interestingly, unlike other reported members of Canescentia , P . linzhiense showed no antagonistic effect on root rotting fungi. The new taxon isolated here has the potential to be used as a biocontrol agent especially for economically important phytopathogens or emerging pathogens on diseases occurring on citrus or rice., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Liang, Jeewon, Dhandevi, Durairajan, Li, Lin and Wang.)
- Published
- 2021
- Full Text
- View/download PDF
45. Methods to Study Autophagocytosis in Magnaporthe oryzae.
- Author
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Li L, Zhu XM, Liu XH, and Lin FC
- Subjects
- Ascomycota, Autophagy, Fungal Proteins genetics, Plant Diseases, Magnaporthe genetics, Oryza
- Abstract
Autophagy is an evolutionarily conservative biological process in eukaryotes. Since the lysosomes were discovered by De Duve in the 1950s, autophagy has been studied for more than half a century and the mechanism of autophagy process has been discovered in many model organisms. In the rice blast fungus Magnaporthe oryzae, autophagy relative proteins are essential for appressorium formation, penetration, and invasive growth. The null mutants for the expression of autophagy gene homologs in M. oryzae lose their pathogenicity for infection of host plants. In this chapter, we provide some methods for monitoring autophagy process using physics and biochemistry assays in M. oryzae. Moreover, similar approaches can be used to monitor autophagy in other plant filamentous pathogenic fungi.
- Published
- 2021
- Full Text
- View/download PDF
46. Similarities and Differences of Autophagy in Mammals, Plants, and Microbes.
- Author
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Lin FC, Shi HB, and Liu XH
- Subjects
- Animals, Cytoplasm, Mammals genetics, Saccharomyces cerevisiae, Autophagy, Vacuoles
- Abstract
Autophagy, a highly conserved metabolic process in eukaryotes, is a widespread degradation/recycling system. However, there are significant differences (as well as similarities) between autophagy in animals, plants, and microorganisms such as yeast. While the overall process of autophagy is similar between different organisms, the molecular mechanisms and the pathways regulating autophagy are different, which is manifested in the diversity and specificity of the genes involved. In general, the autophagy system is much more complicated in mammals than in yeast. In addition, there are some differences in the types of autophagy present in animals, plants, and microorganisms. For example, there is a unique type of selective autophagy called the cytoplasm-to-vacuole targeting (Cvt) pathway in yeast, and a special kind of autophagy, chloroplast autophagy, exists in plants. In conclusion, although autophagy is highly conserved in eukaryotes, there are still many differences between autophagy of animals, plants, and microorganisms., (© 2021. Science Press.)
- Published
- 2021
- Full Text
- View/download PDF
47. Isolation and Functional Analysis of Effector Proteins of Magnaporthe oryzae.
- Author
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Dai MD, Li Y, Sun LX, Lin FC, and Liu XH
- Subjects
- Animals, Ascomycota, Plant Diseases, Porcine Reproductive and Respiratory Syndrome, Swine, Magnaporthe, Oryza
- Abstract
In nature, plants have evolved a myriad of preformed and induced defenses to protect themselves from microbes. Upon microbial infection, the recognition of the microbe-associated molecular patterns (MAMPs) by the pattern recognition receptors (PRRs) triggers the first stage of defense response (Dodds and Rathjen, Nat Rev Genet 11:539-548, 2010). However, in order to develop microbial delivery, effectors target PRRs for deregulating immune responses and facilitating host colonization (Thomma et al., Plant Cell 23:4-15, 2011). Here, we contribute a protocol for the screening system of Magnaporthe oryzae effectors and construct a fluorescent system to trace secretory proteins in the sheath infection samples. Using the tobacco rattle virus (TRV) system, the proteins including LysM, Chitin, Cutinase, and CFEM domains were selected and divided into two kinds according to the results of cell death induced or inhibited test in Nicotiana benthamiana. Then, candidate effectors can be deleted or overexpressed in M. oryzae. The barley or rice infection with M. oryzae, rice leaf sheath inoculation, and subcellular localization during infection can be performed to explore the functions of these effectors.
- Published
- 2021
- Full Text
- View/download PDF
48. MoSec61β, the beta subunit of Sec61, is involved in fungal development and pathogenicity, plant immunity, and ER-phagy in Magnaporthe oryzae .
- Author
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Wei YY, Liang S, Zhang YR, Lu JP, Lin FC, and Liu XH
- Subjects
- Autophagy, Gene Expression Regulation, Fungal, Hyphae growth & development, Oryza microbiology, Oxidative Stress, Plant Diseases immunology, Plant Diseases microbiology, Spores, Fungal growth & development, Virulence, Ascomycota genetics, Ascomycota pathogenicity, Endoplasmic Reticulum immunology, Fungal Proteins genetics, Plant Immunity, SEC Translocation Channels genetics
- Abstract
The process of protein translocation into the endoplasmic reticulum (ER) is the initial and decisive step in the biosynthesis of all secretory proteins and many soluble organelle proteins. In this process, the Sec61 complex is the protein-conducting channel for transport. In this study, we identified and characterized the β subunit of the Sec61 complex in Magnaporthe oryzae (MoSec61β). Compared with the wild-type strain Guy11, the Δ Mosec61β mutant exhibited highly branched mycelial morphology, reduced conidiation, high sensitivity to cell wall integrity stress, severely reduced virulence to rice and barley, and restricted biotrophic invasion. The turgor pressure of Δ Mosec61β was notably reduced, which affected the function of appressoria. Moreover, Δ Mosec61β was also sensitive to oxidative stress and exhibited a reduced ability to overcome plant immunity. Further examination demonstrated that MoSec61β affected the normal secretion of the apoplastic effectors Bas4 and Slp1. In addition, Δ Mosec61β upregulated the level of ER-phagy. In conclusion, our results demonstrate the importance of the roles played by MoSec61β in the fungal development and pathogenesis of M. oryzae .
- Published
- 2020
- Full Text
- View/download PDF
49. PoMet3 and PoMet14 associated with sulfate assimilation are essential for conidiogenesis and pathogenicity in Pyricularia oryzae.
- Author
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Li Y, Wu M, Yu Q, Su ZZ, Dong B, Lu JP, Lin FC, Liao QS, and Liu XH
- Subjects
- Ascomycota drug effects, Cysteine metabolism, Cysteine pharmacology, Gene Deletion, Hordeum microbiology, Hyphae pathogenicity, Hyphae physiology, Methionine metabolism, Methionine pharmacology, Mutation, Oryza microbiology, Phosphotransferases (Alcohol Group Acceptor) genetics, Plant Diseases microbiology, Spores, Fungal, Sulfate Adenylyltransferase genetics, Virulence, Ascomycota physiology, Phosphotransferases (Alcohol Group Acceptor) metabolism, Sulfate Adenylyltransferase metabolism
- Abstract
Pyricularia oryzae is the causal agent of blast disease on staple gramineous crops. Sulphur is an essential element for the biosynthesis of cysteine and methionine in fungi. Here, we targeted the P. oryzae PoMET3 encoding the enzyme ATP sulfurylase, and PoMET14 encoding the APS (adenosine-5'-phosphosulphate) kinase that are involved in sulfate assimilation and sulphur-containing amino acids biosynthesis. In P. oryzae, deletion of PoMET3 or PoMET14 separately results in defects of conidiophore formation, significant impairments in conidiation, methionine and cysteine auxotrophy, limited invasive hypha extension, and remarkably reduced virulence on rice and barley. Furthermore, the defects of the null mutants could be restored by supplementing with exogenous cysteine or methionine. Our study explored the biological functions of sulfur assimilation and sulphur-containing amino acids biosynthesis in P. oryzae.
- Published
- 2020
- Full Text
- View/download PDF
50. Pex13 and Pex14, the key components of the peroxisomal docking complex, are required for peroxisome formation, host infection and pathogenicity-related morphogenesis in Magnaporthe oryzae.
- Author
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Wang JY, Li L, Chai RY, Qiu HP, Zhang Z, Wang YL, Liu XH, Lin FC, and Sun GC
- Subjects
- Amino Acid Sequence, Fungal Proteins metabolism, Hordeum microbiology, Oryza microbiology, Peroxisomes metabolism, Plant Diseases microbiology, Virulence, Fungal Proteins genetics, Host-Pathogen Interactions, Magnaporthe genetics, Magnaporthe pathogenicity, Peroxisomes genetics
- Abstract
Peroxisomes are ubiquitous organelles in eukaryotic cells that fulfill multiple important metabolisms. Pex13 and Pex14 are key components of the peroxisomal docking complex in yeasts and mammals. In the present work, we functionally characterized the homologues of Pex13 and Pex14 (Mopex13 and Mopex14) in the rice blast fungus Magnaporthe oryzae. Mopex13 and Mopex14 were peroxisomal membrane distributed and were both essential for the maintenance of Mopex14/17 on the peroxisomal membrane. Mopex13 and Mopex14 interacted with each other, and with Mopex14/17 and peroxisomal matrix protein receptors. Disruption of Mopex13 and Mopex14 resulted in a cytoplasmic distribution of peroxisomal matrix proteins and the Woronin body protein Hex1. In the ultrastructure of Δmopex13 and Δmopex14 cells, peroxisomes were detected on fewer occasions, and the Woronin bodies and related structures were dramatically affected. The Δmopex13 and Δmopex14 mutants were reduced in vegetative growth, conidial generation and mycelial melanization, in addition, Δmopex13 showed reduced conidial germination and appressorial formation and abnomal appressorial morphology. Both Δmopex13 and Δmopex14 were deficient in appressorial turgor and nonpathogenic to their hosts. The infection failures in Δmopex13 and Δmopex14 were also due to their reduced ability to degrade fatty acids and to endure reactive oxygen species and cell wall-disrupting compounds. Additionally, Mopex13 and Mopex14 were required for the sexual reproduction of the fungus. These data indicate that Mopex13 and Mopex14, as key components of the peroxisomal docking complex, are indispensable for peroxisomal biogenesis, fungal development and pathogenicity in the rice blast fungus.
- Published
- 2019
- Full Text
- View/download PDF
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