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37 results on '"Kimbrel, Jeffrey"'

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1. Toxin-Antitoxin Systems Reflect Community Interactions Through Horizontal Gene Transfer.

2. Differential laboratory passaging of SARS-CoV-2 viral stocks impacts the in vitro assessment of neutralizing antibodies.

3. Microbiome processing of organic nitrogen input supports growth and cyanotoxin production of Microcystis aeruginosa cultures.

4. Coastal bacteria and protists assimilate viral carbon and nitrogen.

5. MISIP: a data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence and experiment.

6. Melanization slows the rapid movement of fungal necromass carbon and nitrogen into both bacterial and fungal decomposer communities and soils.

7. Terabase-Scale Coassembly of a Tropical Soil Microbiome.

8. Dynamic Phaeodactylum tricornutum exometabolites shape surrounding bacterial communities.

9. The Western Lake Erie culture collection: A promising resource for evaluating the physiological and genetic diversity of Microcystis and its associated microbiome.

10. Quantitative Stable-Isotope Probing (qSIP) with Metagenomics Links Microbial Physiology and Activity to Soil Moisture in Mediterranean-Climate Grassland Ecosystems.

11. Multiple Mutations Associated with Emergent Variants Can Be Detected as Low-Frequency Mutations in Early SARS-CoV-2 Pandemic Clinical Samples.

12. Plant-associated fungi support bacterial resilience following water limitation.

13. HT-SIP: a semi-automated stable isotope probing pipeline identifies cross-kingdom interactions in the hyphosphere of arbuscular mycorrhizal fungi.

14. SARS-CoV-2 Monitoring in Wastewater Reveals Novel Variants and Biomarkers of Infection.

15. Bacterial Community Assembly, Succession, and Metabolic Function during Outdoor Cultivation of Microchloropsis salina .

16. Bacterial response to spatial gradients of algal-derived nutrients in a porous microplate.

17. Prokaryotic Genome Annotation.

18. Active virus-host interactions at sub-freezing temperatures in Arctic peat soil.

19. MultiPhATE2: code for functional annotation and comparison of phage genomes.

20. The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes.

22. multiPhATE: bioinformatics pipeline for functional annotation of phage isolates.

23. Combining multiple functional annotation tools increases coverage of metabolic annotation.

24. Attachment between heterotrophic bacteria and microalgae influences symbiotic microscale interactions.

25. Microbial Community Structure and Functional Potential Along a Hypersaline Gradient.

26. Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill.

27. The Draft Genome Sequence of Nocardioides sp. Strain CF8 Reveals the Scope of Its Metabolic Capabilities.

28. Higher order asymptotics for negative binomial regression inferences from RNA-sequencing data.

29. Sequencing and de novo transcriptome assembly of Brachypodium sylvaticum (Poaceae).

30. Mutualistic co-evolution of type III effector genes in Sinorhizobium fredii and Bradyrhizobium japonicum.

31. RNA-Seq for Plant Pathogenic Bacteria.

32. Genome sequencing and comparative analysis of the carrot bacterial blight pathogen, Xanthomonas hortorum pv. carotae M081, for insights into pathogenicity and applications in molecular diagnostics.

33. The membrane-associated monooxygenase in the butane-oxidizing Gram-positive bacterium Nocardioides sp. strain CF8 is a novel member of the AMO/PMO family.

34. GENE-counter: a computational pipeline for the analysis of RNA-Seq data for gene expression differences.

35. An improved, high-quality draft genome sequence of the Germination-Arrest Factor-producing Pseudomonas fluorescens WH6.

36. Recombineering and stable integration of the Pseudomonas syringae pv. syringae 61 hrp/hrc cluster into the genome of the soil bacterium Pseudomonas fluorescens Pf0-1.

37. Copper delivery by the copper chaperone for chloroplast and cytosolic copper/zinc-superoxide dismutases: regulation and unexpected phenotypes in an Arabidopsis mutant.

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