106 results on '"Kano, Kenji"'
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2. Influence of distal glycan mimics on direct electron transfer performance for bilirubin oxidase bioelectrocatalysts.
- Author
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Nishida S, Sumi H, Noji H, Itoh A, Kataoka K, Yamashita S, Kano K, Sowa K, Kitazumi Y, and Shirai O
- Subjects
- Electron Transport, Electrons, Oxidoreductases Acting on CH-CH Group Donors genetics, Oxidoreductases Acting on CH-CH Group Donors metabolism
- Abstract
Bilirubin oxidase (BOD) is a bioelectrocatalyst that reduces dioxygen (O
2 ) to water and is capable of direct electron transfer (DET)-type bioelectrocatalysis via its electrode-active site (T1 Cu). BOD from Myrothecium verrucaria (mBOD) has been widely studied and has strong DET activity. mBOD contains two N-linked glycans (N-glycans) with N472 and N482 binding sites distal to T1 Cu. We previously reported that different N-glycan compositions affect the enzymatic orientation on the electrode by using recombinant BOD expressed in Pichia pastoris and the deglycosylation method. However, the individual function of the two N-glycans and the effects of N-glycan composition (size, structure, and non-reducing termini) on DET-type reactions are still unclear. In this study, we utilize maleimide-functionalized polyethylene glycol (MAL-PEG) as an N-glycan mimic to evaluate the aforementioned effects. Site-specific enzyme-PEG crosslinking was carried out by specific binding of maleimide to Cys residues. Recombinant BOD expressed in Escherichia coli (eBOD), which does not have a glycosylation system, was used as a benchmark to evaluate the effect. Site-directed mutagenesis of Asn residue (N472 or N482) into Cys residue is utilized to realize site-specific glycan mimic modification to the original binding site., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)- Published
- 2023
- Full Text
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3. Effects of N-linked glycans of bilirubin oxidase on direct electron transfer-type bioelectrocatalysis.
- Author
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Suzuki Y, Itoh A, Kataoka K, Yamashita S, Kano K, Sowa K, Kitazumi Y, and Shirai O
- Subjects
- Electrodes, Kinetics, Polysaccharides, Electrons, Oxidoreductases Acting on CH-CH Group Donors metabolism
- Abstract
Bilirubin oxidase from Myrothecium verrucaria (mBOD) is a promising enzyme for catalyzing the four-electron reduction of dioxygen into water and realizes direct electron transfer (DET)-type bioelectrocatalysis. It has two N-linked glycans (N-glycans), and N472 and N482 are known as binding sites. Both binding sites located on opposite side of the type I (T1) Cu, which is the electrode-active site of BOD. We investigated the effect of N-glycans on DET-type bioelectrocatalysis by performing electrochemical measurements using electrodes with controlled surface charges. Two types of BODs with different N-glycans, mBOD and recombinant BOD overexpressed in Pichia pastoris (pBOD), and their deglycosylated forms (dg-mBOD and dg-pBOD) were used in this study. Kinetic analysis of the steady-state catalytic waves revealed that both size and composition of N-glycans affected the orientation of adsorbed BODs on the electrodes. Interestingly, the most favorable orientation was achieved with pBOD, which has the largest N-glycans. Furthermore, the effect of the orientation control by the N-glycans is cooperative with electrostatic interaction., (Copyright © 2022 Elsevier B.V. All rights reserved.)
- Published
- 2022
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4. Quantification of leuco-indigo in indigo-dye-fermenting suspension by normal pulse voltammetry.
- Author
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Kikuchi M, Sowa K, Takeuchi M, Nakagawa K, Matsunaga M, Ando A, Kano K, Ogawa J, and Sakuradani E
- Subjects
- Suspensions, Coloring Agents, Indigo Carmine
- Abstract
Quantification of leuco-indigo is most important for Aizome, Japanese indigo-dyeing; however, there has been no convenient quantitative method. This study demonstrated that normal pulse voltammetry under quiescent conditions can be used to detect leuco-indigo. As a result of quantification of leuco-indigo in the depth direction in fermenting suspensions, the steady-state concentrations of leuco-indigo showed sigmoidal profiles in the depth direction. The steady state is caused by competitive reactions of microbial reduction of indigo and autoxidation of leuco-indigo by O
2 dissolved from the air interface of the suspension. In addition, we investigated the effects of stirring the suspension and adding some nutrients to the concentration profile. The weakened activity was partially recovered by the addition of ethanol and remarkably recovered by the addition of hipolypepton or glucose. Knowledge is essential for the proper management of indigo-dye-fermenting suspensions., (Copyright © 2022 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.)- Published
- 2022
- Full Text
- View/download PDF
5. Multiple electron transfer pathways of tungsten-containing formate dehydrogenase in direct electron transfer-type bioelectrocatalysis.
- Author
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Yoshikawa T, Makino F, Miyata T, Suzuki Y, Tanaka H, Namba K, Kano K, Sowa K, Kitazumi Y, and Shirai O
- Subjects
- Electrodes, Electron Transport, Electrons, Formate Dehydrogenases chemistry, Tungsten
- Abstract
Tungsten-containing formate dehydrogenase from Methylorubrum extroquens AM1 (FoDH1)-a promising biocatalyst for the interconversion of carbon dioxide/formate and nicotine adenine dinucleotide (NAD
+ )/NADH redox couples-was investigated using structural biology and bioelectrochemistry. FoDH1 is reported to be an enzyme that can realize "direct electron transfer (DET)-type bioelectrocatalysis." However, its 3-D structure, electrode-active sites, and electron transfer (ET) pathways remain unclear. The ET pathways were investigated using structural information, electrostatic interactions between the electrode and the enzyme, and the differences in the substrates. Two electrode-active sites and multiple ET pathways in FoDH1 were discovered.- Published
- 2022
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6. Cyanide sensitivity in direct electron transfer-type bioelectrocatalysis by membrane-bound alcohol dehydrogenase from Gluconobacter oxydans.
- Author
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Adachi T, Sowa K, Kitazumi Y, Shirai O, and Kano K
- Subjects
- Electron Transport, Kinetics, Electron Spin Resonance Spectroscopy, Cell Membrane metabolism, Electrodes, Gluconobacter oxydans metabolism, Gluconobacter oxydans enzymology, Alcohol Dehydrogenase metabolism, Cyanides metabolism, Biocatalysis
- Abstract
An overexpression system of membrane-bound alcohol dehydrogenase (ADH) from Gluconobacter oxydans was constructed to examine its bioelectrocatalytic characteristics. The effects of cyanide (CN
- ) addition on the kinetics of direct electron transfer (DET)-type bioelectrocatalysis by ADH were analyzed. CN- enhanced the bioelectrocatalytic activity, while the catalytic activity in the solution remained unchanged, even in the presence of CN- . Electrochemical methods and electron spin resonance spectroscopy showed the detailed electron transfer pathway in the DET-type bioelectrocatalysis by ADH. Briefly, ADH is suggested to communicate with an electrode via a CN- -insensitive and H+ -sensitive heme c in DET. These characteristics of ADH with respect to CN- suggest the involvement of ADH in CN- -insensitive respiration in G. oxydans., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2021 Elsevier B.V. All rights reserved.)- Published
- 2022
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7. Fundamental insight into redox enzyme-based bioelectrocatalysis.
- Author
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Kano K
- Subjects
- Electrodes, Enzymes metabolism, Enzymes chemistry, Electrochemical Techniques methods, Electron Transport, Electrochemistry, Catalysis, Oxidation-Reduction, Biocatalysis
- Abstract
Redox enzymes can work as efficient electrocatalysts. The coupling of redox enzymatic reactions with electrode reactions is called enzymatic bioelectrocatalysis, which imparts high reaction specificity to electrode reactions with nonspecific characteristics. The key factors required for bioelectrocatalysis are hydride ion/electron transfer characteristics and low specificity for either substrate in redox enzymes. Several theoretical features of steady-state responses are introduced to understand bioelectrocatalysis and to extend the performance of bioelectrocatalytic systems. Applications of the coupling concept to bioelectrochemical devices are also summarized with emphasis on the achievements recorded in the research group of the author., (© The Author(s) 2021. Published by Oxford University Press on behalf of Japan Society for Bioscience, Biotechnology, and Agrochemistry.)
- Published
- 2022
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8. Isolation and characterization of indigo-reducing bacteria and analysis of microbiota from indigo fermentation suspensions.
- Author
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Nakagawa K, Takeuchi M, Tada M, Matsunaga M, Kugo M, Kiyofuji S, Kikuchi M, Yomota K, Sakamoto T, Kano K, Ogawa J, and Sakuradani E
- Subjects
- Oxidation-Reduction, Anthraquinones metabolism, Enterococcus metabolism, Enterococcus isolation & purification, Corynebacterium glutamicum metabolism, RNA, Ribosomal, 16S genetics, Bacteria metabolism, Bacteria classification, Bacteria isolation & purification, Suspensions, Indigo Carmine metabolism, Fermentation, Microbiota
- Abstract
In natural indigo dyeing, the water-insoluble indigo included in the composted indigo leaves called sukumo is converted to water-soluble leuco-indigo through the reduction activities of microorganisms under alkaline conditions. To understand the relationship between indigo reduction and microorganisms in indigo-fermentation suspensions, we isolated and identified the microorganisms that reduce indigo and analyzed the microbiota in indigo-fermentation suspensions. Indigo-reducing microorganisms, which were not isolated by means of a conventional indigo carmine-reduction assay method, were isolated by using indigo as a direct substrate and further identified and characterized. We succeeded in isolating bacteria closely related to Corynebacterium glutamicum, Chryseomicrobium aureum, and Enterococcus sp. for the first time. Anthraquinone was found to be an effective mediator that facilitated the indigo-reduction activity of the isolated strains. On analysis of the microbiota in indigo-fermentation suspensions, the ratio of indigo-reducing bacteria and others was found to be important for maintaining the indigo-reduction activity., (© The Author(s) 2021. Published by Oxford University Press on behalf of Japan Society for Bioscience, Biotechnology, and Agrochemistry.)
- Published
- 2022
- Full Text
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9. Fluoride Ion-Selective Electrode for Organic Solutions.
- Author
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Yokoyama Y, Kano K, Kondo Y, Miyahara Y, Miyazaki K, and Abe T
- Abstract
Fluoride ions are used in battery electrolytes in fluoride shuttle batteries. Since organic solvents are used in battery electrolytes, there is a growing demand to develop appropriate methods for quantifying fluoride ion concentration in organic solvents. In this study, a fluoride ion-selective electrode (ISE) for organic solutions is proposed as an electrode of the second kind. A Ag|AgF electrode was made via the anodization of a silver wire in propylene carbonate (PC) containing dissolved fluoride ions. The resultant electrode exhibits a stable linear response of the open circuit potential to the logarithm of the fluoride ion concentration in PC solutions over a range of 10
-4 -10-2 mol dm-3 . The lower and upper limits of the linear response were interpreted in terms of the solubility and the formation of a silver fluoride complex. The use of this electrode of the second kind is suitable for the analysis of fluoride ions in organic solutions and is a promising concept for the development of ISEs for the detection of ions in organic solutions under highly restrictive conditions.- Published
- 2021
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10. Pollution Control of Nitrate-selective Membrane by the Inner Solution and On-site Monitoring of Nitrate Concentration in Soil.
- Author
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Nakao E, Kitazumi Y, Kano K, and Shirai O
- Abstract
A liquid-membrane type nitrate-selective electrode was improved to lower the influence of contaminants by modifying its inner electrode system from Ag | AgCl | Cl
- to Ag | Ag+ . The NO3 - -selective electrode displayed a linear response to the concentration of NO3 - with a Nernstian slope of -53 ± 1 mV decade-1 , in the concentration region between 10-5 and 2 mol dm-3 (M). The NO3 - detection limit was about 10-5 M. The electrochemical response of this electrode was stable for more than 30 days. The deterioration in responding characteristics due to the coexistence of Cl- was suppressed by use of the Ag | Ag+ redox couple in the absence of Cl- inside the NO3 - -selective electrode.- Published
- 2021
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11. Voltammetric in-situ monitoring of leuco-indigo in indigo-fermenting suspensions.
- Author
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Nakagawa K, Takeuchi M, Kikuchi M, Tada M, Sakamoto T, Kano K, Ogawa J, and Sakuradani E
- Subjects
- Coloring Agents metabolism, Electrochemistry, Electrodes, Indigo Carmine metabolism, Suspensions, Coloring Agents chemistry, Fermentation, Indigo Carmine chemistry
- Abstract
Cyclic voltammetry was successfully applied to in-vivo monitoring of leuco-indigo in indigo-fermenting suspensions under quiescent conditions without deoxygenation; the working and counter electrodes were kept on the surface of each suspension by a polyethylene vinyl alcohol tube holder. The anodic peak current was used as a measure of the leuco-indigo concentration. The voltammetric wave shape suggested partial solubilization of the indigo with some macromolecules in the fermenting suspensions, which lead to an in-situ method without any electrode surface pretreatment. The anodic peak current well reflected the dyeing activity of a suspensions. The results obtained for laboratory-level fermentation systems clarified the number of days required for dye fermentation, the effectiveness of addition of old suspension as an additive for preparing fresh fermenting suspensions, and the importance of addition of a nitrogen-based nutrient as well as a glucose-based one to recover the indigo-reducing activity. The method can also be applied to determine the amounts of indigo in used dye suspensions and extracts of fermented indigo leaves (sukumo) by adding a chemical reduction pretreatment., (Copyright © 2021 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.)
- Published
- 2021
- Full Text
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12. Highly sensitive and stable fructose self-powered biosensor based on a self-charging biosupercapacitor.
- Author
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Bollella P, Boeva Z, Latonen RM, Kano K, Gorton L, and Bobacka J
- Subjects
- Electrodes, Fructose, Bioelectric Energy Sources, Biosensing Techniques
- Abstract
Herein, we present an alternative approach to obtain a highly sensitive and stable self-powered biosensor that was used to detect D-fructose as proof of concept.In this platform, we perform a two-step process, viz. self-charging the biosupercapacitor for a constant time by using D-fructose as fuel and using the stored charge to realize the detection of D-fructose by performing several polarization curves at different D-fructose concentrations. The proposed BSC shows an instantaneous power density release of 17.6 mW cm
-2 and 3.8 mW cm-2 in pulse mode and at constant load, respectively. Moreover, the power density achieved for the self-charging BSC in pulse mode or under constant load allows for an enhancement of the sensitivity of the device up to 10 times (3.82 ± 0.01 mW cm-2 mM-1 , charging time = 70 min) compared to the BSC in continuous operation mode and 100 times compared to the normal enzymatic fuel cell. The platform can potentially be employed as a self-powered biosensor in food or biomedical applications., (Copyright © 2020 Elsevier B.V. All rights reserved.)- Published
- 2021
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13. Electrical cell-to-cell communication using aggregates of model cells.
- Author
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Kasai I, Kitazumi Y, Kano K, and Shirai O
- Subjects
- Action Potentials, Electricity, Electronics, Membrane Potentials, Potassium chemistry, Potassium Channels chemistry, Sodium chemistry, Sodium Channels chemistry, Artificial Cells, Cell Communication, Models, Biological
- Abstract
Cell-to-cell communication via a local current caused by ion transport is elucidated using a model-cell system. To imitate tissues such as smooth muscles and cardiac muscles, liquid-membrane cells mimicking the function of K+ and Na+ channels were made. Connecting these channel-mimicking cells (K+ channel and voltage-gated Na+ channel) in parallel, model cells imitating living cell functions were constructed. Action-potential propagation within the cell aggregate model constructed by multiple model cells was investigated. When an action potential was generated at one cell, the cell behaved as an electric power source. Since a circulating current flowed around the cell, it flowed through neighboring model cells. Influx and efflux currents caused negative and positive shifts of the membrane potential, respectively, on the surface of neighboring model cells. The action potential was generated at the depolarized domain when the membrane potential exceeded the threshold of the voltage-gated Na+ channels. Thus, the action potential spread all over the cell system. When an external electric stimulus was applied to the layered cell-aggregate model system, propagation of the action potential was facilitated as if they were synchronized.
- Published
- 2020
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14. Automatic Management of Nutrient Solution for Hydroponics-Construction of Multi-ion Stat.
- Author
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Xu K, Kitazumi Y, Kano K, and Shirai O
- Abstract
In order to improve plant factories, an appropriate control system on fertilization is urgently required. An automatic management system to control nutrient concentration was constructed using a programmable logic controller (PLC) and ion selective electrodes (ISEs) of nitrate, phosphate, and potassium ion. The concentration of nutrient components in a culture solution was monitored using these ISEs. When the concentration of the nutrient components diminished to the threshold set as an optimum condition (0.1 - 2.0 mM), an appropriate amount of a concentrated solution of each nutrient component was added to the culture solution using solenoid valves connected with the PLC. The present cultivation system was simply constructed without any computers and pumps. Three kinds of automatic control systems simultaneously worked and did not influence each other.
- Published
- 2020
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15. Development Perspective of Bioelectrocatalysis-Based Biosensors.
- Author
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Adachi T, Kitazumi Y, Shirai O, and Kano K
- Abstract
Bioelectrocatalysis provides the intrinsic catalytic functions of redox enzymes to nonspecific electrode reactions and is the most important and basic concept for electrochemical biosensors. This review starts by describing fundamental characteristics of bioelectrocatalytic reactions in mediated and direct electron transfer types from a theoretical viewpoint and summarizes amperometric biosensors based on multi-enzymatic cascades and for multianalyte detection. The review also introduces prospective aspects of two new concepts of biosensors: mass-transfer-controlled (pseudo)steady-state amperometry at microelectrodes with enhanced enzymatic activity without calibration curves and potentiometric coulometry at enzyme/mediator-immobilized biosensors for absolute determination.
- Published
- 2020
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16. Direct electron transfer-type bioelectrocatalysis of FAD-dependent glucose dehydrogenase using porous gold electrodes and enzymatically implanted platinum nanoclusters.
- Author
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Adachi T, Fujii T, Honda M, Kitazumi Y, Shirai O, and Kano K
- Subjects
- Aspergillus chemistry, Catalysis, Electrodes, Electron Transport, Enzymes, Immobilized chemistry, Flavin-Adenine Dinucleotide chemistry, Porosity, Aspergillus enzymology, Glucose 1-Dehydrogenase chemistry, Gold chemistry, Metal Nanoparticles chemistry, Platinum chemistry
- Abstract
The direct electron transfer (DET)-type bioelectrocatalysis of flavin adenine dinucleotide (FAD)-dependent glucose dehydrogenase (GDH) from Aspergillus terreus (AtGDH) was carried out using porous gold (Au) electrodes and enzymatically implanted platinum nanoclusters (PtNCs). The porous Au electrodes were prepared by anodization of planar Au electrodes in a phosphate buffer containing glucose as a reductant. Moreover, PtNCs were generated into AtGDH by an enzymatic reduction of hexachloroplatinate (IV) ion. The modification was confirmed by native polyacrylamide gel electrophoresis and sodium dodecyl sulfate polyacrylamide gel electrophoresis analyses. The AtGDH-adsorbed porous Au electrode showed a DET-type bioelectrocatalytic wave both in the presence and absence of PtNCs; however, the current density with PtNCs (~1 mA cm
-2 at 0 V vs. Ag|AgCl|sat. KCl) was considerably higher than that without PtNCs. The kinetic and thermodynamic analysis of the steady-state catalytic wave indicated that inner PtNCs shortened the distance between the catalytic center of AtGDH (=FAD) and the conductive material, and improved the heterogeneous electron transfer kinetics between them., Competing Interests: Declaration of Competing Interest The authors declared that there is no conflict of interest., (Copyright © 2020 The Authors. Published by Elsevier B.V. All rights reserved.)- Published
- 2020
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17. Fabrication of a Phosphate Ion Selective Electrode Based on Modified Molybdenum Metal.
- Author
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Xu K, Kitazumi Y, Kano K, Sasaki T, and Shirai O
- Abstract
A phosphate ion-selective electrode using molybdenum metal was constructed. The modified molybdenum electrode responded to HPO
4 2- in the presence of molybdenum dioxide and molybdophosphate (PMo12 O40 3- ) on the surface. The electrode exhibited a linear response to HPO4 2- in the concentration range between 1.0 × 10-5 and 1.0 × 10-1 M (mol dm-3 ) in the pH range from 8.0 to 9.5 with a detection limit of 1.0 × 10-6 M. The sensor showed near Nernstian characteristics (27.8 ± 0.5 mV dec-1 ) at pH 9.0. Since the responding potential was attributed to the activity of HPO4 2- , the potential at a given concentration of phosphate depended on the pH. The electrode indicated a good selectivity with respect to other common anions such as NO3 - , SO4 2- , Cl- , HCO3 - and CH3 COO- . The modified molybdenum electrode can be continuously used for over a 1 month with good reproducibility. The feasibility of the electrochemical sensor was proved by successful for the detection of phosphate in real samples.- Published
- 2020
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18. The influence of the shape of Au nanoparticles on the catalytic current of fructose dehydrogenase.
- Author
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Bollella P, Hibino Y, Conejo-Valverde P, Soto-Cruz J, Bergueiro J, Calderón M, Rojas-Carrillo O, Kano K, and Gorton L
- Subjects
- Catalysis, Electrodes, Kinetics, Microscopy, Electron, Transmission, Spectrophotometry, Ultraviolet, Spectroscopy, Near-Infrared, Carbohydrate Dehydrogenases metabolism, Fructose metabolism, Gold chemistry, Metal Nanoparticles chemistry
- Abstract
Graphite electrodes were modified with triangular (AuNTrs) or spherical (AuNPs) nanoparticles and further modified with fructose dehydrogenase (FDH). The present study reports the effect of the shape of these nanoparticles (NPs) on the catalytic current of immobilized FDH pointing out the different contributions on the mass transfer-limited and kinetically limited currents. The influence of the shape of the NPs on the mass transfer-limited and the kinetically limited current has been proved by using two different methods: a rotating disk electrode (RDE) and an electrode mounted in a wall jet flow-through electrochemical cell attached to a flow system. The advantages of using the wall jet flow system compared with the RDE system for kinetic investigations are as follows: no need to account for substrate consumption, especially in the case of desorption of enzyme, and studies of product-inhibited enzymes. The comparison reveals that virtually identical results can be obtained using either of the two techniques. The heterogeneous electron transfer (ET) rate constants (k
S ) were found to be 3.8 ± 0.3 s-1 and 0.9 ± 0.1 s-1 , for triangular and spherical NPs, respectively. The improvement observed for the electrode modified with AuNTrs suggests a more effective enzyme-NP interaction, which can allocate a higher number of enzyme molecules on the electrode surface. Graphical abstract The shape of gold nanoparticles has a crucial effect on the catalytic current related to the oxidation of D-(-)-fructose to 5-keto-D-(-)-fructose occurring at the FDH-modified electrode surface. In particular, AuNTrs have a higher effect compared with the spherical one.- Published
- 2019
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19. Bioelectrocatalytic performance of d-fructose dehydrogenase.
- Author
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Adachi T, Kaida Y, Kitazumi Y, Shirai O, and Kano K
- Subjects
- Amino Acid Sequence, Bacteria chemistry, Bacteria metabolism, Biocatalysis, Biosensing Techniques instrumentation, Carbohydrate Dehydrogenases chemistry, Electron Transport, Oxidation-Reduction, Bacteria enzymology, Bioelectric Energy Sources microbiology, Biosensing Techniques methods, Carbohydrate Dehydrogenases metabolism, Fructose metabolism
- Abstract
This review summarizes the bioelectrocatalytic properties of d-fructose dehydrogenase (FDH), while taking into consideration its enzymatic characteristics. FDH is a membrane-bound flavohemo-protein with a molecular mass of 138 kDa, and it catalyzes the oxidation of d-fructose to 5-keto-d-fructose. The characteristic feature of FDH is its strong direct-electron-transfer (DET)-type bioelectrocatalytic activity. The pathway of the DET-type reaction is discussed. An overview of the application of FDH-based bioelectrocatalysis to biosensors and biofuel cells is also presented, and the benefits and problems associated with it are extensively discussed., (Copyright © 2019 Elsevier B.V. All rights reserved.)
- Published
- 2019
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20. The origin of hyperpolarization based on the directional conduction of action potential using a model nerve cell system.
- Author
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Kaji M, Kitazumi Y, Kano K, and Shirai O
- Subjects
- Animals, Calcium Channels physiology, Ion Transport, Membrane Potentials, Patch-Clamp Techniques, Potassium Channels physiology, Potassium Channels, Voltage-Gated physiology, Synapses physiology, Action Potentials, Models, Neurological, Neurons physiology
- Abstract
In nerve cells, changes in local membrane potentials are generated and propagated along a nerve axon mainly by the function of K
+ and Na+ channels. Generally, concurrent monitoring of multi-points on an axon is performed based on the voltage-clamp method. As the respective membrane potentials have been evaluated by considering the relations between the applied potential, the local current, and conductance, experimental values are not directly evaluated. We directly measured the actual membrane potentials and local currents of the respective cells using a nerve-model system comprising liquid-membrane cells. It was then proven that the action potential spreads along the axon toward the axon terminal due to the function of both the channel-type receptors in the synapse and voltage-gated Na+ channels on the axon, and that hyperpolarization cannot be caused by only the operation of the delayed-K+ and the voltage-gated Na+ channels., (Copyright © 2019 Elsevier B.V. All rights reserved.)- Published
- 2019
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21. Construction of an Automatic Nutrient Solution Management System for Hydroponics-Adjustment of the K + -Concentration and Volume of Water.
- Author
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Xu K, Kitazumi Y, Kano K, and Shirai O
- Abstract
An automatic management system for nutrient solutions was constructed using a programmable logic controller (PLC) and a K
+ -ion selective electrode (K+ -ISE). The concentration of K+ was monitored by the K+ -ISE. When the concentration of K+ fell to the threshold limit, an appropriate amount of a concentrated K+ solution was added to the hydroponic solution. The volume was also maintained at a constant level by addition of water. This system can be constructed simply and inexpensively without any computers and pumps.- Published
- 2019
- Full Text
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22. Construction of Nitrate-selective Electrodes and Monitoring of Nitrates in Hydroponic Solutions.
- Author
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Fukao Y, Kitazumi Y, Kano K, and Shirai O
- Subjects
- Electrodes, Equipment Design, Ions, Limit of Detection, Membranes, Artificial, Solutions, Environmental Monitoring methods, Hydroponics methods, Nitrates analysis, Water Pollutants, Chemical analysis
- Abstract
A liquid-membrane type nitrate-selective electrode was constructed, in which the responding membrane contained polyvinylchloride, o-nitrophenyloctylether and tetraheptylammonium nitrate. The NO
3 - -selective electrode displayed a linear response to the concentration of NO3 - with a Nernstian slope of -53.3 ± 1.0 mV decade-1 , in the 10-5 - 10-1 mol dm-3 (M) NO3 - concentration range. The NO3 - detection limit was about 10-6 M. The electrochemical response of this electrode was stable for more than 30 days. Measurements performed using the NO3 - -sensor indicated that in the presence of green plants, the concentration of NO3 - in a hydroponic solution decreased from 0.20 to 0.05 mM over a three-day period.- Published
- 2018
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23. Using metabolic charge production in the tricarboxylic acid cycle (Q TCA ) to evaluate the extracellular-electron-transfer performances of Shewanella spp.
- Author
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Li SL, Yen JH, Kano K, Liu SM, Liu CL, Cheng SS, and Chen HY
- Subjects
- Anthraquinones chemistry, Biomass, Electron Transport, Ferricyanides chemistry, Hydrogen-Ion Concentration, Lactic Acid metabolism, NAD metabolism, Oxidation-Reduction, Oxidative Phosphorylation, Riboflavin chemistry, Shewanella growth & development, Sulfonic Acids chemistry, Citric Acid Cycle, Shewanella metabolism
- Abstract
Using an electrochemical cell equipped with carbon felt electrodes (poised at +0.63 V vs. SHE), the current production capabilities of two Shewanella strains-NTOU1 and KR-12-were examined under various conditions with lactate as an electron donor. The metabolic charge produced in the tricarboxylic acid cycle (Q
TCA ) was calculated by mass-balance. The data showed a linear relation between the electric coulomb production (QEL ) and QTCA with an R2 of 0.65. In addition, a large amount of pyruvate accumulation was observed at pH = 6, rendering QTCA negative. The results indicate an occurrence of an undesired cataplerotic reaction. It was also found that QTCA provides important information showing the oxygen-boosting TCA cycle and anodic-current generation of Shewanella spp. Linear dependence of the change in charge for biomass growth (4.52FΔnCell ) on QTCA was also found as expressed by 4.52FΔnCell = 1.0428 QTCA + 0.0442, indicating that these two charge quantities are inherently identical under most of the experimental conditions. In the mediator-spiked experiments, the external addition of the mediators (ferricyanide, anthraquinone-2, 6-disulfonate, and riboflavin) beyond certain concentrations inhibited the activity of the TCA cycle, indicating that the oxidative phosphorylation is deactivated by excessive amounts of mediators, yet Shewanella spp. are constrained with regard to carrying out the substrate-level phosphorylation., (Copyright © 2018 Elsevier B.V. All rights reserved.)- Published
- 2018
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24. Nanostructured Porous Electrodes by the Anodization of Gold for an Application as Scaffolds in Direct-electron-transfer-type Bioelectrocatalysis.
- Author
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Sakai K, Kitazumi Y, Shirai O, and Kano K
- Subjects
- Electrochemistry, Electrodes, Electron Transport, Glucose chemistry, Hydrogen Peroxide chemistry, Oxalic Acid chemistry, Oxygen chemistry, Porosity, Surface Properties, Biocatalysis, Enzymes, Immobilized chemistry, Gold chemistry, Nanostructures chemistry, Oxidoreductases Acting on CH-CH Group Donors chemistry, Peroxidase chemistry
- Abstract
In this study, nanostructured porous gold electrodes were prepared by the anodization of gold in the presence of oxalic acid or glucose as a reductant, and applied as scaffolds for direct electron transfer (DET)-type bioelectrocatalysis. Gold cations generated in the anodization seem to be reduced by the reductant to construct a porous gold structure. The DET-type performance of the electrode was examined using two DET-type model enzymes, bilirubin oxidase (BOD) and peroxidase (POD), for the four-electron reduction of dioxygen and the two-electron reduction of peroxide, respectively. BOD and POD on the anodized porous gold electrodes exhibited well-defined sigmoidal steady-state waves corresponding to DET-type bioelectrocatalysis. Scanning electron microscopy images revealed sponge-like pores on the electrodes. The anodized porous gold electrodes demonstrate promise as scaffolds for DET-type bioelectrocatalysis.
- Published
- 2018
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25. Highly Sensitive Membraneless Fructose Biosensor Based on Fructose Dehydrogenase Immobilized onto Aryl Thiol Modified Highly Porous Gold Electrode: Characterization and Application in Food Samples.
- Author
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Bollella P, Hibino Y, Kano K, Gorton L, and Antiochia R
- Subjects
- Carbohydrate Dehydrogenases chemistry, Electrodes, Enzymes, Immobilized chemistry, Fructose metabolism, Gold chemistry, Gold metabolism, Particle Size, Porosity, Sulfhydryl Compounds chemistry, Surface Properties, Biosensing Techniques, Carbohydrate Dehydrogenases metabolism, Enzymes, Immobilized metabolism, Food Analysis, Fructose analysis, Sulfhydryl Compounds metabolism
- Abstract
In this paper we present a new method to electrodeposit highly porous gold (h-PG) onto a polycrystalline solid gold electrode without any template. The electrodeposition is carried out by first cycling the electrode potential between +0.8 and 0 V in 10 mM HAuCl
4 with 2.5 M NH4 Cl and then applying a negative potential for the production of hydrogen bubbles at the electrode surface. After that the modified electrode was characterized in sulfuric acid to estimate the real surface area ( Areal ) to be close to 24 cm2 , which is roughly 300 times higher compared to the bare gold electrodes (0.08 cm2 ). The electrode was further incubated overnight with three different thiols (4-mercaptobenzoic acid (4-MBA), 4-mercaptophenol (4-MPh), and 4-aminothiophenol (4-APh)) in order to produce differently charged self-assembled monolayers (SAMs) on the electrode surface. Finally a fructose dehydrogenase (FDH) solution was drop-cast onto the electrodes. All the modified electrodes were investigated by cyclic voltammetry both under nonturnover and turnover conditions. The FDH/4-MPh/h-PG exhibited two couples of redox peaks for the heme c1 and heme c2 of the cytochrome domain of FDH and as well as a well pronounced catalytic current density (about 1000 μA cm-2 in the presence of 10 mM fructose) due to the presence of -OH groups on the electrode surface, which stabilize and orientate the enzyme layer on the electrode surface. The FDH/4-MPh/h-PG based electrode showed the best analytical performance with an excellent stability (90% retained activity over 90 days), a detection limit of 0.3 μM fructose, a linear range between 0.05 and 5 mM, and a sensitivity of 175 ± 15 μA cm-2 mM-1 . These properties were favorably compared with other fructose biosensors reported in the literature. The biosensor was successively tested to quantify the fructose content in food and beverage samples. No significant interference present in the sample matrixes was observed.- Published
- 2018
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26. Electrochemical Study on the Extracellular Electron Transfer Pathway from Shewanella Strain Hac319 to Electrodes.
- Author
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Takeuchi R, Sugimoto Y, Kitazumi Y, Shirai O, Ogawa J, and Kano K
- Subjects
- Cyanides pharmacology, Electrodes, Electron Transport drug effects, Extracellular Space drug effects, Flavin Mononucleotide metabolism, Lactic Acid metabolism, Shewanella drug effects, Electrochemistry instrumentation, Extracellular Space metabolism, Shewanella cytology, Shewanella metabolism
- Abstract
Shewanella can transfer electrons to various extracellular electron acceptors. We electrochemically investigated the pathway of extracellular electron transfer from Shewanella strain Hac319 to electrodes. A resting cell suspension of Shewanella strain Hac319 containing lactate produced a steady-state sigmoidal wave in the presence of flavin mononucleotide (FMN) in cyclic voltammetry, but not in the absence of FMN. A harvested cell suspension without cell-washing also produced a similar catalytic wave without any external addition of free FMN. The midpoint potentials of the two sigmoidal waves were identical to the redox potential of free FMN. The data indicate that FMN secreted from the Shewanella strain Hac319 works as an electron-transfer mediator from the cell to electrodes. An addition of cyanide to a resting cell suspension of Shewanella strain Hac319 increased the rate of the FMN reduction in the presence of lactate, while it decreased the respiration rate. By considering the fact that cyanide is coordinated to the heme moiety of hemoproteins and shifts the redox potential to the negative potential side, the data indicate that the electron derived from lactate is predominantly transferred in a down-hill mode from an electron donor with a redox potential more negative than that of FMN without going through outer membrane cytochromes c molecules.
- Published
- 2018
- Full Text
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27. Simultaneous Detection of Lactate Enantiomers Based on Diffusion-controlled Bioelectrocatalysis.
- Author
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Matsui Y, Kitazumi Y, Shirai O, and Kano K
- Subjects
- Animals, Diffusion, Electrochemistry, Enzymes, Immobilized chemistry, Enzymes, Immobilized metabolism, Lactic Acid blood, Stereoisomerism, Time Factors, Biocatalysis, Biosensing Techniques methods, Lactic Acid analysis, Lactic Acid chemistry
- Abstract
Amperometric biosensors were constructed for the simultaneous detection of lactate enantiomers. The enantioselectivity of the sensor is based on NAD-dependent l- and d-lactate dehydrogenases that, respectively, oxidize l- and d-lactates into pyruvate. The NADH formed during the enzymatic reduction was catalytically oxidized at Meldola's blue-adsorbed mesoporous electrodes. Stable amperometric measurements were performed in a two-electrode system using Ag|AgCl|sat. KCl as a counter electrode via a salt bridge. The response of the sensor reached a pseudo-steady state within 60 s. The agreement of the sensitivities for l- and d-lactates and the pseudo-steady-state characteristics of the sensors demonstrate that the current is strongly influenced by the diffusion of lactates at the edge of the electrode, enabling reproducible measurements. The pseudo steady-state characteristics are also realized at the chip-type electrode. The sensor was successfully applied for the detection of d- and l-lactates in horse serum.
- Published
- 2018
- Full Text
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28. Reactivation of standard [NiFe]-hydrogenase and bioelectrochemical catalysis of proton reduction and hydrogen oxidation in a mediated-electron-transfer system.
- Author
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Shiraiwa S, So K, Sugimoto Y, Kitazumi Y, Shirai O, Nishikawa K, Higuchi Y, and Kano K
- Subjects
- Biocatalysis, Biosensing Techniques, Desulfovibrio vulgaris chemistry, Desulfovibrio vulgaris metabolism, Electron Transport, Enzyme Activation, Enzymes, Immobilized chemistry, Hydrogenase chemistry, Models, Molecular, Oxidation-Reduction, Protons, Thermodynamics, Viologens chemistry, Desulfovibrio vulgaris enzymology, Enzymes, Immobilized metabolism, Hydrogen metabolism, Hydrogenase metabolism
- Abstract
Standard [NiFe]-hydrogenase from Desulfovibrio vulgaris Miyazaki F (DvMF-H
2 ase) catalyzes the uptake and production of hydrogen (H2 ) and is a promising biocatalyst for future energy devices. However, DvMF-H2 ase experiences oxidative inactivation under oxidative stress to generate Ni-A and Ni-B states. It takes a long time to reactivate the Ni-A state by chemical reduction, whereas the Ni-B state is quickly reactivated under reducing conditions. Oxidative inhibition limits the application of DvMF-H2 ase in practical devices. In this research, we constructed a mediated-electron-transfer system by co-immobilizing DvMF-H2 ase and a viologen redox polymer (VP) on electrodes. The system can avoid oxidative inactivation into the Ni-B state at high electrode potentials and rapidly reactivate the Ni-A state by electrochemical reduction of VP. H2 oxidation and H+ reduction were realized by adjusting the pH from a thermodynamic viewpoint. Using carbon felt as a working-electrode material, high current densities-up to (200 ± 70) and -(100 ± 9) mA cm-3 for the H2 -oxidation and H+ -reduction reactions, respectively-were attained., (Copyright © 2018 Elsevier B.V. All rights reserved.)- Published
- 2018
- Full Text
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29. Carbon-nanotube-caged microbial electrodes for bioelectrocatalysis.
- Author
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Xia HQ, Sakai K, Kitazumi Y, Shirai O, Takagi K, and Kano K
- Subjects
- Biodegradation, Environmental, Catalysis, Formate Dehydrogenases metabolism, Oxidation-Reduction, Bioelectric Energy Sources microbiology, Biosensing Techniques methods, Electrodes, Methylobacterium extorquens metabolism, Nanotubes, Carbon chemistry
- Abstract
A method to stably immobilize microbes on electrodes was developed. Resting cells of Methylobacterium extorquens AM1(MeAM1) were caged within multiwalled carbon nanotubes (MWNTs)by adding the cells to a water dispersion of MWNTs then allowing the resulting mixture to dry on electrodes. The MeAM1-MWCNTs electrode thus obtained displayed excellent activities in the bidirectional bioelectrocatalysis due to formate dehydrogenase(s) in the resting cells; formate oxidation and carbon dioxide reduction proceeded at steady-state catalytic current densities of 0.6 ± 0.1 and -0.8 ± 0.1 mA cm
-2 , respectively, using methyl viologen as mediator under very mild conditions (pH 7.0, atmospheric pressure, and 37 °C). In addition, the catalytic signal was stable for more than one week under continuous operation., (Copyright © 2018 Elsevier Inc. All rights reserved.)- Published
- 2018
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30. Construction of photo-driven bioanodes using thylakoid membranes and multi-walled carbon nanotubes.
- Author
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Takeuchi R, Suzuki A, Sakai K, Kitazumi Y, Shirai O, and Kano K
- Subjects
- Bioelectric Energy Sources, Catalysis, Electrodes, Electron Transport, Light, Thermodynamics, Nanotubes, Carbon chemistry, Naphthoquinones chemistry, Spinacia oleracea chemistry, Thylakoids chemistry
- Abstract
A photo-driven bioanode was constructed using the thylakoid membrane from spinach, carbon nanotubes, and an artificial mediator. By considering a linear free-energy relationship in the electron transfer from the thylakoid membrane to the mediators, and the oxygen resistance of the reduced mediators, 1,2-naphthoquinone was selected as the most suitable mediator for the photo-driven bioanode. Water-dispersed multi-walled carbon nanotubes served as scaffolds to hold the thylakoid membrane on a porous electrode. The constructed photo-driven bioanode exhibited a photocurrent density of over 100μAcm
-2 at a photon flux density of 1500μmolm-2 s-1 ., (Copyright © 2018 Elsevier B.V. All rights reserved.)- Published
- 2018
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31. The influence of pH and divalent/monovalent cations on the internal electron transfer (IET), enzymatic activity, and structure of fructose dehydrogenase.
- Author
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Bollella P, Hibino Y, Kano K, Gorton L, and Antiochia R
- Subjects
- Carbohydrate Dehydrogenases chemistry, Cations metabolism, Electron Transport, Gluconobacter chemistry, Gluconobacter metabolism, Hydrogen-Ion Concentration, Models, Molecular, Protein Conformation, Carbohydrate Dehydrogenases metabolism, Fructose metabolism, Gluconobacter enzymology
- Abstract
We report on the influence of pH and monovalent/divalent cations on the catalytic current response, internal electron transfer (IET), and structure of fructose dehydrogenase (FDH) by using amperometry, spectrophotometry, and circular dichroism (CD). Amperometric measurements were performed on graphite electrodes, onto which FDH was adsorbed and the effect on the response current to fructose was investigated when varying the pH and the concentrations of divalent/monovalent cations in the contacting buffer. In the presence of 10 mM CaCl
2 , a current increase of up to ≈ 240% was observed, probably due to an intra-complexation reaction between Ca2+ and the aspartate/glutamate residues found at the interface between the dehydrogenase domain and the cytochrome domain of FDH. Contrary to CaCl2 , addition of MgCl2 did not show any particular influence, whereas addition of monovalent cations (Na+ or K+ ) led to a slight linear increase in the maximum response current. To complement the amperometric investigations, spectrophotometric assays were carried out under homogeneous conditions in the presence of a 1-electron non-proton-acceptor, cytochrome c, or a 2-electron-proton acceptor, 2,6-dichloroindophenol (DCIP), respectively. In the case of cytochrome c, it was possible to observe a remarkable increase in the absorbance up to 200% when 10 mM CaCl2 was added. However, by further increasing the concentration of CaCl2 up to 50 mM and 100 mM, a decrease in the absorbance with a slight inhibition effect was observed for the highest CaCl2 concentration. Addition of MgCl2 or of the monovalent cations shows, surprisingly, no effect on the electron transfer to the electron acceptor. Contrary to the case of cytochrome c, with DCIP none of the cations tested seem to affect the rate of catalysis. In order to correlate the results obtained by amperometric and spectrophotometric measurements, CD experiments have been performed showing a great structural change of FDH when increasing the concentration CaCl2 up to 50 mM, at which the enzyme molecules start to agglomerate, hindering the substrate access to the active site probably due to a chelation reaction occurring at the enzyme surface with the glutamate/aspartate residues. Graphical Abstract Fructose dehydrogenase (FDH) consists of three subunits, but only two are involved in the electron transfer process: (I) 2e- /2H+ fructose oxidation, (II) internal electron transfer (IET), (III) direct electron transfer (DET) through 2 heme c; FDH activity either in solution or when immobilized onto an electrode surface is enhanced about 2.5-fold by adding 10 mM CaCl2 to the buffer solution, whereas MgCl2 had an "inhibition" effect. Moreover, the additions of KCl or NaCl led to a slight current increase.- Published
- 2018
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32. Factors affecting the interaction between carbon nanotubes and redox enzymes in direct electron transfer-type bioelectrocatalysis.
- Author
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Xia HQ, Kitazumi Y, Shirai O, Ozawa H, Onizuka M, Komukai T, and Kano K
- Subjects
- Adsorption, Bacteria enzymology, Electrochemistry, Electrodes, Electron Transport, Oxidoreductases chemistry, Oxygen metabolism, Biocatalysis, Nanotubes, Carbon chemistry, Oxidoreductases metabolism
- Abstract
The effects of three types of water-soluble carbon nanotubes (CNTs) of different lengths on the direct electron transfer (DET)-type bioelectrocatalysis of redox enzymes were investigated. Bilirubin oxidase (BOD), copper efflux oxidase (CueO), and a membrane-bound NiFe hydrogenase (H
2 ase) were used as model redox enzymes for four-electron dioxygen (O2 ) reduction (in the case of BOD and CueO) and two-electron dihydrogen (H2 ) oxidation (in the case of H2 ase). As a result, diffusion-controlled O2 reduction in an O2 -saturated neutral buffer was realized by BOD on CNTs of a length of 1μm, but the catalytic current densities decreased as the length of CNTs increased. However, almost opposite trends were obtained when CueO and H2 ase were utilized as the biocatalysts. Factors of the CNTs and the enzymes affecting the characteristics of the DET-type bioelectrocatalysis of the three enzymes were discussed. Finally, the electrostatic interaction between an enzyme (especially the portion near the redox active center) and CNTs is proposed as one of the most important factors governing the performance of DET-type bioelectrocatalysis., (Copyright © 2017 Elsevier B.V. All rights reserved.)- Published
- 2017
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33. Electrostatic roles in electron transfer from [NiFe] hydrogenase to cytochrome c 3 from Desulfovibrio vulgaris Miyazaki F.
- Author
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Sugimoto Y, Kitazumi Y, Shirai O, Nishikawa K, Higuchi Y, Yamamoto M, and Kano K
- Subjects
- Cell Respiration, Cytochrome c Group metabolism, Electron Transport, Electrons, Hydrogenase metabolism, Kinetics, Osmolar Concentration, Oxidation-Reduction, Protein Interaction Maps, Static Electricity, Cytochrome c Group chemistry, Desulfovibrio vulgaris enzymology, Hydrogenase chemistry, Models, Molecular, Protein Conformation
- Abstract
Electrostatic interactions between proteins are key factors that govern the association and reaction rate. We spectroscopically determine the second-order reaction rate constant (k) of electron transfer from [NiFe] hydrogenase (H
2 ase) to cytochrome (cyt) c3 at various ionic strengths (I). The k value decreases with I. To analyze the results, we develop a semi-analytical formula for I dependence of k based on the assumptions that molecules are spherical and the reaction proceeds via a transition state. Fitting of the formula to the experimental data reveals that the interaction occurs in limited regions with opposite charges and with radii much smaller than those estimated from crystal structures. This suggests that local charges in H2 ase and cyt c3 play important roles in the reaction. Although the crystallographic data indicate a positive electrostatic potential over almost the entire surface of the proteins, there exists a small region with negative potential on H2 ase at which the electron transfer from H2 ase to cyt c3 may occur. This local negative potential region is identical to the hypothetical interaction sphere predicted by the analysis. Furthermore, I dependence of k is predicted by the Adaptive Poisson-Boltzmann Solver considering all charges of the amino acids in the proteins and the configuration of H2 ase/cyt c3 complex. The calculation reproduces the experimental results except at extremely low I. These results indicate that the stabilization derived from the local electrostatic interaction in the H2 ase/cyt c3 complex overcomes the destabilization derived from the electrostatic repulsion of the overall positive charge of both proteins., (Copyright © 2017 Elsevier B.V. All rights reserved.)- Published
- 2017
- Full Text
- View/download PDF
34. Diffusion-controlled Mediated Electron Transfer-type Bioelectrocatalysis Using Microband Electrodes as Ultimate Amperometric Glucose Sensors.
- Author
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Matsui Y, Hamamoto K, Kitazumi Y, Shirai O, and Kano K
- Subjects
- Catalysis, Diffusion, Electrodes, Electron Transport, Enzymes, Immobilized chemistry, Enzymes, Immobilized metabolism, Glucose metabolism, Glucose 1-Dehydrogenase metabolism, Biosensing Techniques, Electrochemical Techniques, Glucose analysis, Glucose 1-Dehydrogenase chemistry
- Abstract
We performed numerical simulations on an extremely fast, mediated, electron transfer-type bioelectrocatalytic reaction using a microband electrode. The simulations under fast-enzyme-kinetics conditions predicted that the decrement of the current density by increaseing the microband thickness would effectively improve the upper limit of detection. These predictions were accurate for an ultrathin-ring with thickness of 100 nm and gold leaf with thickness of 10 μm electrodes, acting as novel amperometric glucose sensors with FAD-dependent glucose dehydrogenase. The gold leaf electrode provided pseudo-steady-state currents which were proportional to the glucose concentration up to a concentration of 20 times higher than the mediator concentration.
- Published
- 2017
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- View/download PDF
35. Direct Electron Transfer-type Bioelectrocatalysis of Peroxidase at Mesoporous Carbon Electrodes and Its Application for Glucose Determination Based on Bienzyme System.
- Author
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Xia HQ, Kitazumi Y, Shirai O, and Kano K
- Subjects
- Catalysis, Electrodes, Electron Transport, Enzymes, Immobilized chemistry, Enzymes, Immobilized metabolism, Glucose metabolism, Glucose Oxidase metabolism, Horseradish Peroxidase metabolism, Porosity, Surface Properties, Biosensing Techniques, Carbon chemistry, Electrochemical Techniques, Glucose analysis, Glucose Oxidase chemistry, Horseradish Peroxidase chemistry
- Abstract
Non-catalytic direct electron transfer (DET) signal of Compound I of horseradish peroxidase (POD) was first detected at 0.7 V on POD/carbon nanotube mixture-modified electrodes. Excellent performance of DET-type bioelectrocatalysis was achieved with POD immobilized with glutaraldehyde on Ketjen Black (KB)-modified electrodes for H
2 O2 reduction with an onset potential of 0.65 V (vs. Ag | AgCl | sat. KCl) without any electrode surface modification. The POD-immobilized KB electrode was found to be suitable for detecting H2 O2 with a low detection limit (0.1 μM at S/N = 3) at -0.1 V. By co-immobilizing glucose oxidase (GOD) and POD on the KB-modified electrode, a bienzyme electrode was constructed to couple the oxidase reaction of GOD with the DET-type bioelectrocatalytic reduction of H2 O2 by POD. The amperometric detection of glucose was performed with a high sensitivity (0.33 ± 0.01 μA cm-2 μM-1 ) and a low detection limit (2 μM at S/N = 3).- Published
- 2017
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36. Interaction of Flavin-Dependent Fructose Dehydrogenase with Cytochrome c as Basis for the Construction of Biomacromolecular Architectures on Electrodes.
- Author
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Wettstein C, Kano K, Schäfer D, Wollenberger U, and Lisdat F
- Subjects
- Adsorption, Animals, Carbohydrate Dehydrogenases metabolism, Cytochromes c metabolism, Diffusion, Electrodes, Enzymes, Immobilized metabolism, Gluconobacter chemistry, Gluconobacter metabolism, Horses, Hydrogen-Ion Concentration, Models, Molecular, Biosensing Techniques methods, Carbohydrate Dehydrogenases chemistry, Cytochromes c chemistry, Enzymes, Immobilized chemistry, Gluconobacter enzymology
- Abstract
The creation of electron transfer (ET) chains based on the defined arrangement of enzymes and redox proteins on electrode surfaces represents an interesting approach within the field of bioelectrocatalysis. In this study, we investigated the ET reaction of the flavin-dependent enzyme fructose dehydrogenase (FDH) with the redox protein cytochrome c (cyt c). Two different pH optima were found for the reaction in acidic and neutral solutions. When cyt c was adsorbed on an electrode surface while the enzyme remained in solution, ET proceeded efficiently in media of neutral pH. Interprotein ET was also observed in acidic media; however, it appeared to be less efficient. These findings suggest that two different ET pathways between the enzyme and cyt c may occur. Moreover, cyt c and FDH were immobilized in multiple layers on an electrode surface by means of another biomacromolecule: DNA (double stranded) using the layer-by-layer technique. The biprotein multilayer architecture showed a catalytic response in dependence on the fructose concentration, indicating that the ET reaction between both proteins is feasible even in the immobilized state. The electrode showed a defined response to fructose and a good storage stability. Our results contribute to the better understanding of the ET reaction between FDH and cyt c and provide the basis for the creation of all-biomolecule based fructose sensors the sensitivity of which can be controlled by the layer preparation.
- Published
- 2016
- Full Text
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37. Propagation of the change in the membrane potential using a biocell-model.
- Author
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Takano Y, Shirai O, Kitazumi Y, and Kano K
- Subjects
- Action Potentials, Animals, Artificial Cells cytology, Axons metabolism, Electric Capacitance, Electrochemical Techniques instrumentation, Equipment Design, Humans, Models, Neurological, Neurons cytology, Potassium Channels metabolism, Potentiometry, Sodium Channels metabolism, Artificial Cells metabolism, Membrane Potentials, Neurons metabolism
- Abstract
A new model system of nerve conduction, which has two sites (the potential-sending and the potential-receiving sites) was constructed by the use of some liquid-membrane cells which mimic the function of the K(+) and Na(+) channels. The model system setup was such that the membrane potential of the K(+)-channel cell (resting potential) was different from that of the Na(+)-channel cell (action potential). Initially, the K(+)-channel cell at the potential-sending site was connected to that at the potential-receiving site. After switching from the K(+)-channel cell to the Na(+)-channel cell at the potential-sending site, the membrane potential of the K(+)-channel cell at the potential-receiving site began to vary with the generation of the circulating current. By placing several K(+)-channel cells in parallel at the potential-receiving site, the propagation mechanism of the action potential was interpreted and the influence of the resistor and the capacitor on the propagation was evaluated.
- Published
- 2016
- Full Text
- View/download PDF
38. Understanding of the Effects of Ionic Strength on the Bimolecular Rate Constant between Structurally Identified Redox Enzymes and Charged Substrates Using Numerical Simulations on the Basis of the Poisson-Boltzmann Equation.
- Author
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Sugimoto Y, Kitazumi Y, Shirai O, Yamamoto M, and Kano K
- Subjects
- Osmolar Concentration, Oxidation-Reduction, Poisson Distribution, Protein Conformation, Thermodynamics, Glucose Oxidase chemistry, Glucose Oxidase metabolism, Molecular Dynamics Simulation, Oxidoreductases Acting on CH-CH Group Donors chemistry, Oxidoreductases Acting on CH-CH Group Donors metabolism
- Abstract
To understand electrostatic interactions in biomolecules, the bimolecular rate constants (k) between redox enzymes and charged substrates (in this study, redox mediators in the electrode reaction) were evaluated at various ionic strengths (I) for the mediated bioelectrocatalytic reaction. The k value between bilirubin oxidase (BOD) and positively charged mediators increased with I, while that between BOD and negatively charged mediators decreased with I. The opposite trend was observed for the reaction of glucose oxidase (GOD). In the case of noncharged mediators, the k value was independent of I for both BOD and GOD. These results reflect the electrostatic interactions between the enzymes and the mediators. Furthermore, we estimated k/k° (k° being the thermodynamic rate constant) by numerical simulation (finite element method) based on the Poisson-Boltzmann (PB) equation. By considering the charges of individual atoms involved in the amino acids around the substrate binding sites in the enzymes, the simulated k/k° values well reproduced the experimental data. In conclusion, k/k° can be predicted by PB-based simulation as long as the crystal structure of the enzyme and the substrate binding site are known.
- Published
- 2016
- Full Text
- View/download PDF
39. Analysis of Ion Transport through a Single Channel of Gramicidin A in Bilayer Lipid Membranes.
- Author
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Kubota S, Shirai O, Kitazumi Y, and Kano K
- Subjects
- Diffusion, Electric Conductivity, Electrolytes chemistry, Membrane Potentials, Permeability, Potassium Chloride chemistry, Thermodynamics, Water chemistry, Electrochemistry methods, Gramicidin chemistry, Ions chemistry, Lipid Bilayers chemistry
- Abstract
Ion transport through a single channel of gramicidin A (GA) within the bilayer lipid membrane (BLM) between two aqueous phases (W1 and W2) has been analyzed based on the electroneutrality principle. The single-channel current increases in proportion to the magnitude of the applied membrane potential and is also dependent on the permeability coefficients of electrolyte ions (K(+) and Cl(-)). By varying the ratio of the concentration of KCl in W1 to that in W2, the ratio of the diffusion coefficient of K(+) in the BLM to that of Cl(-) in the BLM can be evaluated.
- Published
- 2016
- Full Text
- View/download PDF
40. Electrostatic interaction between an enzyme and electrodes in the electric double layer examined in a view of direct electron transfer-type bioelectrocatalysis.
- Author
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Sugimoto Y, Kitazumi Y, Tsujimura S, Shirai O, Yamamoto M, and Kano K
- Subjects
- Adsorption, Electricity, Electron Transport, Gold chemistry, Oxidoreductases chemistry, Protein Denaturation, Sulfhydryl Compounds chemistry, Surface Properties, Biosensing Techniques, Catalysis, Oxidoreductases isolation & purification
- Abstract
Effects of the electrode poential on the activity of an adsorbed enzyme has been examined by using copper efflux oxidase (CueO) as a model enzyme and by monitoring direct electron transfer (DET)-type bioelectrocatalysis of oxygen reduction. CueO adsorbed on bare Au electrodes at around the point of zero charge (E(pzc)) shows the highest DET activity, and the activity decreases as the adsorption potential (E(ad); at which the enzyme adsorbs) is far from E(pzc). We propose a model to explain the phenomena in which the electrostatic interaction between the enzyme and electrodes in the electric double layer affects the orientation and the stability of the adsorbed enzyme. The self-assembled monolayer of butanethiol on Au electrodes decreases the electric field in the outside of the inner Helmholtz plane and drastically diminishes the E(ad) dependence of the DET activity of CueO. When CueO is adsorbed on bare Au electrodes under open circuit potential and then is held at hold potentials (E(ho)) more positive than E(pzc), the DET activity of the CueO rapidly decreases with the hold time. The strong electric field with positive surface charge density on the metallic electrode (σ(M)) leads to fatal denaturation of the adsorbed CueO. Such denaturation effect is not so serious at E(ho)<
- Published
- 2015
- Full Text
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41. Influence of the Circulating Current on the Propagation of the Change in Membrane Potential.
- Author
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Kushida Y, Shirai O, Takano Y, Kitazumi Y, and Kano K
- Subjects
- Electrochemistry, Ethylene Dichlorides chemistry, Action Potentials, Biomimetics, Electric Conductivity
- Abstract
The propagation of the change in potential differences across liquid membranes from the potential-sending cell to the potential-receiving cell was investigated by use of a system combined with three liquid membrane cells, which were composed of two aqueous phases and a 1,2-dichloroethane solution phase. The ionic composition of one potential-sending cell (S) was identical to that of the receiving cell (Rec), and that of another potential-sending cell (Ap) was different from that of the Rec. When the connection of cell Rec was switched from cell S to cell Ap, the change in the membrane potential was caused by the circulating current. The greater the ratio of the interfacial area of the membrane of cell Ap to that of cell Rec, the faster the change in the membrane potential propagated from cell Ap to cell Rec.
- Published
- 2015
- Full Text
- View/download PDF
42. Factors to Govern Soluble and Insoluble Aggregate-formation in Monoclonal Antibodies.
- Author
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Fukuda J, Iwura T, Yanagihara S, and Kano K
- Subjects
- Biopharmaceutics instrumentation, Calorimetry, Differential Scanning, Chemistry, Pharmaceutical, Chromatography, Gel, Dynamic Light Scattering, Hot Temperature, Models, Theoretical, Multivariate Analysis, Protein Binding, Protein Conformation, Protein Stability, Solubility, Spectrometry, Fluorescence, Antibodies, Monoclonal chemistry, Biopharmaceutics methods, Immunoglobulin G chemistry, Protein Multimerization
- Abstract
The aggregation formation of monoclonal antibodies as biopharmaceuticals induced by heat stress was evaluated by size-exclusion chromatography, and the formation rate was correlated with several physicochemical parameters of the antibodies to clarify the factors to govern the aggregate formation. The parameters we studied were: the melting temperature (Tm) and the standard enthalpy of the melting point (ΔmH°) evaluated by differential scanning calorimetry under given and common conditions; the wavelength (λmax) and the intensity (Fint) of the maximum fluorescence peak of 1-anilinonaphthalene-8-sulfonate as a probe dye; the z-average diameter (D) evaluated by dynamic light scattering; and the isoelectric point (pI) and the hydrophobic index (Hpho) of the complementarity determining region calculated from the amino acid sequence. Multivariate statistical analysis with these explanatory variables based on Akaike's information criterion indicates that the soluble aggregate formation is negatively correlated with Tm and pI, while the insoluble aggregate formation is positively correlated with Fint and pI. Based on these results, the mechanisms of the aggregate formation and methods to prevent the formation are discussed.
- Published
- 2015
- Full Text
- View/download PDF
43. Fabrication and Characterization of Ultrathin-ring Electrodes for Pseudo-steady-state Amperometric Detection.
- Author
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Kitazumi Y, Hamamoto K, Noda T, Shirai O, and Kano K
- Abstract
The fabrication of ultrathin-ring electrodes with a diameter of 2 mm and a thickness of 100 nm is established. The ultrathin-ring electrodes provide a large density of pseudo-steady-state currents, and realize pseudo-steady-state amperometry under quiescent conditions without a Faraday cage. Under the limiting current conditions, the current response at the ultrathin-ring electrode can be well explained by the theory of the microband electrode response. Cyclic voltammograms at the ultrathin-ring electrode show sigmoidal characteristics with some hysteresis. Numerical simulation reveals that the hysteresis can be ascribed to the time-dependence of pseudo-steady-state current. The performance of amperometry with the ultrathin-ring electrode has been verified in its application to redox enzyme kinetic measurements.
- Published
- 2015
- Full Text
- View/download PDF
44. Substituent effect on the thermodynamic solubility of structural analogs: relative contribution of crystal packing and hydration.
- Author
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Ozaki S, Nakagawa Y, Shirai O, and Kano K
- Subjects
- Chemistry, Pharmaceutical, Crystallization, Drug Stability, Hydrophobic and Hydrophilic Interactions, Linear Models, Models, Chemical, Phase Transition, Solubility, Technology, Pharmaceutical methods, Phenylurea Compounds chemistry, Temperature, Water chemistry
- Abstract
Thermodynamic analysis of the solubility of benzoylphenylurea (BPU) derivatives was conducted to investigate the relative importance of crystal packing and hydration for improving solubility with minor structural modification. The contribution of crystal packing to solubility was evaluated from the change in Gibbs energy on the transition from the crystalline to liquid state. Hydration Gibbs energy was estimated using a linear free-energy relationship between octanol-water partition coefficients and gas-water partition coefficients. The established solubility model satisfactorily explained the relative thermodynamic solubility of the model compounds and revealed that crystal packing and hydration equally controlled solubility of the structural analogs. All hydrophobic substituents were undesirable for solubility in terms of hydration, as expected. On the other hand, some of these hydrophobic substituents destabilized crystal packing and improved the solubility of the BPU derivatives when their impact on crystal packing exceeded their negative influence on hydration. The replacement of a single substituent could cause more than a 10-fold enhancement in thermodynamic solubility; this degree of improvement was comparable to that generally achieved by amorphous formulations. Detailed analysis of thermodynamic solubility will allow us to better understand the true substituent effect and design drug-like candidates efficiently., (© 2014 Wiley Periodicals, Inc. and the American Pharmacists Association.)
- Published
- 2014
- Full Text
- View/download PDF
45. Separation and quantification of monoclonal-antibody aggregates by hollow-fiber-flow field-flow fractionation.
- Author
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Fukuda J, Iwura T, Yanagihara S, and Kano K
- Subjects
- Fractionation, Field Flow instrumentation, Hot Temperature, Antibodies, Monoclonal chemistry, Antibodies, Monoclonal isolation & purification, Fractionation, Field Flow methods, Protein Aggregates
- Abstract
Hollow-fiber-flow field-flow fractionation (HF5) separates protein molecules on the basis of the difference in the diffusion coefficient, and can evaluate the aggregation ratio of proteins. However, HF5 is still a minor technique because information on the separation conditions is limited. We examined in detail the effect of different settings, including the main-flow rate, the cross-flow rate, the focus point, the injection amount, and the ionic strength of the mobile phase, on fractographic characteristics. On the basis of the results, we proposed optimized conditions of the HF5 method for quantification of monoclonal antibody in sample solutions. The HF5 method was qualified regarding the precision, accuracy, linearity of the main peak, and quantitation limit. In addition, the HF5 method was applied to non-heated Mab A and heat-induced-antibody-aggregate-containing samples to evaluate the aggregation ratio and the distribution extent. The separation performance was comparable with or better than that of conventional methods including analytical ultracentrifugation-sedimentation velocity and asymmetric-flow field-flow fractionation.
- Published
- 2014
- Full Text
- View/download PDF
46. Characteristics of fast mediated bioelectrocatalytic reaction near microelectrodes.
- Author
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Kitazumi Y, Noda T, Shirai O, Yamamoto M, and Kano K
- Subjects
- Biocatalysis, Diffusion, Enzymes chemistry, Microelectrodes, Biosensing Techniques, Enzymes metabolism, Numerical Analysis, Computer-Assisted
- Abstract
The pseudo-steady-state current due to a mediated enzymatic reaction on a microelectrode is characterized on the basis of theoretical analysis and numerical simulation. The steady-state current is proportional to substrate concentration when the enzymatic reaction is considerably faster than substrate mass transport via nonlinear diffusion. Under such conditions, the reaction plane, where the mass flow of the substrate is converted to that of the mediator, exists near the electrode surface. The steady-state current increases as the diffusion coefficient of the substrate increases. In contrast, the diffusion coefficient and the concentration of the mediator have minor effects on the current. This difference can be explained on the basis of a change in the reaction plane location. When a sufficient amount of enzyme exists in a system, the system can be used as an amperometric biosensor, the response of which is independent of any change in enzyme activity.
- Published
- 2014
- Full Text
- View/download PDF
47. Realistic prediction of solid pharmaceutical oxidation products by using a novel forced oxidation system.
- Author
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Ueyama E, Tamura K, Mizukawa K, and Kano K
- Subjects
- Chromatography, High Pressure Liquid, Drug Stability, Hydrolysis, Mass Spectrometry, Models, Chemical, Oxidation-Reduction, Solvents, Ferric Compounds chemistry, Hydrogen Peroxide chemistry, Oxidants chemistry, Pharmaceutical Preparations chemistry, Polysorbates chemistry
- Abstract
This study investigated a novel solid-state-based forced oxidation system to enable a realistic prediction of pharmaceutical product oxidation, a key consideration in drug development and manufacture. Polysorbate 80 and ferric(III) acetylacetonate were used as an organic hydroperoxide source and a transition metal catalyst, respectively. Homogeneous solutions of target compounds and these reagents were prepared in a mixed organic solvent. The organic solvent was removed rapidly under reduced pressure, and the oxidation of the resulting dried solid was investigated. Analysis of the oxidation products generated in test compounds by this proposed forced oxidation system using HPLC showed a high similarity with those generated during more prolonged naturalistic drug oxidation. The proposed system provided a better predictive performance in prediction of realistic oxidative degradants of the drugs tested than did other established methods. Another advantage of this system was that the generation of undesired products of hydrolysis, solvolysis, and thermolysis was prevented because efficient oxidation was achieved under mild conditions. The results of this study suggest that this system is suitable for a realistic prediction of oxidative degradation of solid pharmaceuticals., (© 2014 Wiley Periodicals, Inc. and the American Pharmacists Association.)
- Published
- 2014
- Full Text
- View/download PDF
48. Utilization of a precolumn with size exclusion and reversed-phase modes for size-exclusion chromatographic analysis of polysorbate-containing protein aggregates.
- Author
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Fukuda J, Iura T, Yanagihara S, and Kano K
- Subjects
- Chromatography, Gel methods, Chromatography, Reverse-Phase methods, Proteins isolation & purification, Temperature, Chromatography, Gel instrumentation, Chromatography, Reverse-Phase instrumentation, Polysorbates chemistry, Proteins analysis, Proteins chemistry
- Abstract
Size-exclusion chromatography (SEC) is a useful method for quantification of protein aggregates because of its high throughput capacity and highly quantitative performance. One of the problems in this method concerns polysorbates, which are well-known additives for protein-containing products to prevent protein aggregation, but frequently interfere with the photometric detection of protein aggregates. We developed a new SEC method that can separate polysorbates from protein sample solutions in an on-line mode with a precolumn with size exclusion and reversed-phase mixed modes. The precolumn can effectively trap polysorbates in aqueous mobile phase, and the trapped polysorbates are easily eluted with acetonitrile-containing aqueous mobile phase to clean the precolumn. Small parts of protein aggregates may be also trapped on the precolumn depending on temperature and proteins. Setting appropriate column temperature can minimize such inconvenient trapping of aggregates., (Copyright © 2014 Elsevier B.V. All rights reserved.)
- Published
- 2014
- Full Text
- View/download PDF
49. Improvement of a direct electron transfer-type fructose/dioxygen biofuel cell with a substrate-modified biocathode.
- Author
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So K, Kawai S, Hamano Y, Kitazumi Y, Shirai O, Hibi M, Ogawa J, and Kano K
- Subjects
- Bacteria enzymology, Carbohydrate Dehydrogenases metabolism, Electrodes, Electron Transport, Equipment Design, Oxidoreductases Acting on CH-CH Group Donors metabolism, Bioelectric Energy Sources microbiology, Fructose metabolism, Oxygen metabolism
- Abstract
The fructose/dioxygen biofuel cell, one of the direct electron transfer (DET)-type bioelectrochemical devices, utilizes fructose dehydrogenase (FDH) on the anode and multi-copper oxidase such as bilirubin oxidase (BOD) on the cathode as catalysts. The power density in the literature is limited by the biocathode performance. We show that the DET-type biocathode performance is greatly improved, when bilirubin or some related substances are adsorbed on electrodes before the BOD adsorption. Several data show that the substrate modification induces the appropriate orientation of BOD on the electrode surface for the DET. The substrate-modification method has successfully been applied to air-breathing gas-diffusion-type biocathodes. We have also optimized the conditions of the FDH adsorption on carbon cryogel electrodes. Finally, a one-compartment DET-type biofuel cell without separators has been constructed, and the maximum power density of 2.6 mW cm(-2) was achieved at 0.46 V of cell voltage under quiescent (passive) and air atmospheric conditions.
- Published
- 2014
- Full Text
- View/download PDF
50. Direct electron transfer to a metagenome-derived laccase fused to affinity tags near the electroactive copper site.
- Author
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Tsujimura S, Asahi M, Goda-Tsutsumi M, Shirai O, Kano K, and Miyazaki K
- Subjects
- Affinity Labels, Biocatalysis, Electrochemical Techniques, Electrodes, Electron Transport, Electrons, Enzymes, Immobilized chemistry, Enzymes, Immobilized metabolism, Kinetics, Laccase chemistry, Laccase genetics, Oxidation-Reduction, Oxygen chemistry, Recombinant Proteins biosynthesis, Recombinant Proteins chemistry, Recombinant Proteins genetics, Copper chemistry, Laccase metabolism
- Abstract
We demonstrate the efficient direct electron transfer (DET) from an electrode to an engineered laccase isolated from a metagenome. The enzyme has a unique homotrimeric architecture with a two-domain-type laccase subunit. The recombinant laccase-modified mesoporous carbon electrode exhibits an effective catalytic current for oxygen reduction, which depends on the affinity tags attached near the electroactive Cu site of the enzyme. We also investigated the effect of the affinity tags on the orientation of the enzyme on functional thiol-modified Au electrodes. The results suggest that a poly-histidine tag (His-tag) functions as an anchor to control the orientation of the enzyme to enhance the current density of the DET-type bioelectrocatalysis.
- Published
- 2013
- Full Text
- View/download PDF
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