1. Detection of katG, inhA and ahpC gene mutation in clinical isolates of isoniazid-resistant Mycobacterium tuberculosis in Makassar City, South Sulawesi, Indonesia.
- Author
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Junaedi MA, Massi MN, Sjahril R, Halik H, Muttaqin Z, Rifqiani N, Safitri NI, Pratika M, Islam IC, Hamid F, Natzir R, and Ahmad A
- Subjects
- Humans, Indonesia, Oxidoreductases genetics, Microbial Sensitivity Tests, Female, Male, Adult, Multiplex Polymerase Chain Reaction, Drug Resistance, Multiple, Bacterial genetics, Mycobacterium tuberculosis genetics, Mycobacterium tuberculosis drug effects, Mycobacterium tuberculosis isolation & purification, Isoniazid pharmacology, Isoniazid therapeutic use, Antitubercular Agents pharmacology, Antitubercular Agents therapeutic use, Bacterial Proteins genetics, Tuberculosis, Multidrug-Resistant microbiology, Mutation, Catalase genetics
- Abstract
Background: Tuberculosis (TB) is an airborne disease caused by Mycobacterium tuberculosis (M. tuberculosis). The world is currently facing challenges due to the spread of anti-tuberculosis drug-resistant of M. tuberculosis. Isoniazid-resistant (INH), is one of the first-line anti-tuberculosis agents that has a high resistance case. This study used Multiplex allele-specific Polymerase Chain Reaction (MAS-PCR) to detect the most common mutations associated with isoniazid resistance on inhA, katG, and ahpC gene., Methods: This study used samples from clinical isolates of M. tuberculosis which had been tested for their antibiotic sensitivity of first-line anti-tuberculosis drugs. The DNA extraction process was carried out using the boiling method and then amplified with specific primers for inhA, katG, and ahpC genes using the MAS-PCR method. The results are then read on the electrophoretic gel with an interpretation of the mutation gene when the target gene DNA bands were absent according to the allele-specific fragments target., Results: A total of 200 isolates were tested in this study consisting of isoniazid-resistant and susceptible with the largest distribution of Multi-Drug Resistant (MDR) isolates with a total of 146 isolates (73%). The most significant gene mutation was on the ahpC gene in 61 isolates (30,5%) and the combination mutation of the katG + ahpC gene in 52 isolates (26%) with sensitivity and specificity of the test reaching 87% and 42% for the detection of INH-resistant., Conclusion: Mutation on the ahpC gene has the highest percentage in this study. AhpC gene can be considered one of the essential genes to be tested for the cause of isoniazid-resistant. Using MAS-PCR for detecting gene mutation in isoniazid-resistant was simple and easy, it has the potential to be widely used as a rapid screening molecular test., (Copyright © 2023. Published by Elsevier B.V.)
- Published
- 2024
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