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Multi-core fibers (MCFs) have sparked a new paradigm in optical communications and open new possibilities and applications in experimental physics and other fields of science, such as biological and medical imaging. In many of these cases, ultra-short pulse propagation is revealed as a key factor that enables us to exploit the full potential of this technology. Unfortunately, the propagation of such pulses in real MCFs has not yet been modelled considering polarization effects or typical random medium perturbations, which usually give rise to both longitudinal and temporal birefringent effects. Using the concept of local modes, we develop here an accurate ultra-short pulse propagation model that rigorously accounts for these phenomena in single-mode MCFs. Based on this theory, we demonstrate analytically and numerically the intermodal dispersion between different LP 01 polarized core modes induced by these random perturbations when propagating femtosecond pulses in the linear and nonlinear fiber regimes. The ever-decreasing core-to-core distance significantly enhances the intermodal dispersion induced by these birefringent effects, which can become the major physical impairment in the single-mode regime. To demonstrate the power of our model, we give explicit strategies to reduce the impact of this optical impairment by increasing the MCF perturbations.