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Toxoplasma gondii is a single-cell parasite capable of infecting almost all homeotherms posing a grave public health risk globally. There is limited available literature on the T. gondii strains circulating in bird species in the Plateau State, of Nigeria. Consequently, this study was carried out to identify and confirm T. gondii infection and also determine the relationship of the DNA sequences with those of bird species in other parts of the world. To achieve this, brain and heart tissues of 25 bird species were sampled and a nested polymerase chain reaction (nPCR) and sequence analyses of the B1 gene were carried out. The DNA of T. gondii was identified in the heart and brain tissues of 7/7 (100.0 %) of wild bird species, and 15/18 (83.3 %) of domestic local chickens (Gallus gallus domesticus) sampled. The evolutionary relationship among the T. gondii sequences in this study using phylogenetic tree constructed by maximum likelihood method showed the sequences shared a common ancestor with the Type I RH strain (GenBank: AF179871). The T. gondii sequences were in a cluster distinct from other sequences in the GenBank. Calculations of genetic differentiation and genetic diversity indices undertaken and collated revealed three haplotypes with higher haplotype diversity within the T. gondii sequences obtained from wild birds (0.667) compared with the sequences from local chickens (0.333). A 97–100 % homology among the aligned sequences of T. gondii in the study shows that only one strain type exists in all of the samples. This study has established the occurrence of T. gondii infection in asymptomatic bird species in the study area and portrays them as carriers, and potential sources of human infection.

The COVID-19 pandemic challenged health systems globally. Reverse transcription polymerase chain reaction (RT-PCR) is the gold standard for detecting the presence of SARS-CoV-2 in clinical samples. Rapid diagnostic test (RDT) kits for COVID-19 have been widely used in Nigeria. This has greatly improved test turnover rates and significantly decreased the high technical demands of RT-PCR. However, there is currently no nationally representative evaluation of the performance characteristics and reliability of these kits. This study assessed the sensitivity, specificity, and predictive values of ten RDT kits used for COVID-19 testing in Nigeria. This large multi-centred cross-sectional study was conducted across the 6 geo-political zones of Nigeria over four months. Ten antigen (Ag) and antibody (Ab) RDT kits were evaluated, and the results were compared with RT-PCR. One thousand, three hundred and ten (1,310) consenting adults comprising 767 (58.5%) males and 543 (41.5%) females participated in the study. The highest proportion, 757 (57.7%), were in the 20-39 years' age group. In terms of diagnostic performance, Lumira Dx (61.4, 95% CI: 52.4-69.9) had the highest sensitivity while MP SARS and Panbio (98.5, 95% CI: 96.6-99.5) had the highest specificity. For predictive values, Panbio (90.7, 95% CI: 79.7-96.9) and Lumira Dx (81.2, 95% CI: 75.9-85.7) recorded the highest PPV and NPV respectively. Ag-RDTs had better performance characteristics compared with Ab-RDTs; however, the sensitivities of all RDTs in this study were generally low. The relatively high specificity of Ag-RDTs makes them useful for the diagnosis of infection in COVID-19 suspected cases where positive RDT may not require confirmation by molecular testing. There is therefore the need to develop RDTs in-country that will take into consideration the unique environmental factors, interactions with other infectious agents, and strains of the virus circulating locally. This may enhance the precision of rapid and accurate diagnosis of COVID-19 in Nigeria.

Abstract Background Peste des petits ruminants is an endemic disease of sheep and goats in Nigeria and vaccination has been the method of control but sporadic outbreaks have been reported. This study was carried out to characterize PPR viruses from outbreaks in 2007 and 2009 from Kaduna and Plateau States. Results Of the 33 clinical samples analysed, 51.52% (n = 17) were positive for F protein gene primers (F1/F2). All the samples had a sequence similarity of 98-100% among them and 92-97% with the reference vaccine (Nig 75/1) strain. The deduced amino acid homology ranges between 96.3-99.7%. Phylogenetically all the Nigerian sequences cluster with Nig 75/1 and Nig 76/1 in lineage 1. Conclusions PPR is still a problem in Kaduna and Plateau States of Nigeria. The strains involved were genetically closely related to the vaccine strain (Nig 75/1) used in the country. Based on this study, the continued outbreaks in the Country is not due to the efficacy of the vaccine. Therefore, to achieve effective control and possibly eradication of PPR in Nigeria, the current control strategies should be revisited.