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Detection of rare bases (RBs) is key to understanding biological complexity, rapidly diagnosing genetic diseases and advancing personalized medicine. Electrochemical sensors are one of the most promising methods for RB detection, but their low responsiveness limits their effectiveness. Therefore, enhancing selectivity and sensitivity is necessary. γ-Graphyne (γ-GY) has garnered significant attention due to its sp2 and sp hybrid carbon bonds and layered two-dimensional planar structure, as well as its extensive conjugated system, and sizable triangular hole. In this study, the structural characteristics, electronic properties, and sensing parameters of the adsorption involving RBs with both γ-GY and transition metal (Fe, Co, and Ni)-doped γ-graphyne (TM-GY) nanosheets are investigated using density functional theory calculations to evaluate the potential of nanosheets for sequencing RBs in DNA. The result shows that the adsorption interaction between RBs and γ-GY is weak physical adsorption, making it difficult to distinguish RBs. In contrast, the adsorption of RBs with TM-GY is stronger chemisorption and can be completely separated by translocation time and sensing response. Through translocation time calculations, we demonstrate the high selectivity of Ni-GY for RBs. Furthermore, sensitivity analysis reveals that Fe-GY exhibits excellent responsiveness to RBs. Our work reveals that the TM-GY nanosheets hold promise for detecting RBs compared with the γ-GY, and may provide valuable insights for the design of graphyne-based biosensors and catalysts. [ABSTRACT FROM AUTHOR]

The content and proportion of sugars and acids in tomato fruit directly affect its flavor quality. Previous studies have shown that 5-aminolevulinic acid (ALA) could promote fruit ripening and improve its aroma quality. In order to explore the effect of ALA on sugar and acid quality during tomato fruit development, 0, 100, and 200 mg L−1 ALA solutions were sprayed on the fruit surface 10 days after pollination of the fourth inflorescence, and the regulation of ALA on sugar, acid metabolism and flavor quality of tomato fruit was analyzed. The results showed that ALA treatment could enhance the activities of acid invertase (AI), neutral invertase (NI), and sucrose synthase (SS), reduce the activity of sucrose phosphate synthase (SPS), up-regulate the expression of SlAI, SlNI and SlSS, change the composition and content of sugar in tomato fruit at three stages, significantly increase the content of sugars in fruit, and promote the accumulation of sugars into flesh. Secondly, ALA treatments increased the activities of phosphoenolpyruvate carboxykinase (PEPC), malic enzyme (ME), and citrate synthase (CS), upregulated the expression of SlPPC2, SlME1, and SlCS, and reduced the citric acid content at maturity stage, thereby reducing the total organic acid content. In addition, ALA could also increase the number and mass fraction of volatile components in mature tomato fruits. These results indicated that exogenous application of ALA during tomato fruit development could promote the formation of fruit aroma quality and were also conducive to the formation of fruit sugar and acid quality [ABSTRACT FROM AUTHOR]

The organoleptic profile and quality of wine are affected by the presence of different non-Saccharomyces species and strains. Therefore, the identification and characterization of non-Saccharomyces yeasts are the first step to understand their function, and to develop a better strain selection program for winemaking. This study investigated the biodiversity of non-Saccharomyces yeasts associated with spontaneous fermentation of Cabernet Sauvignon wines from five sub-regions (Shi Zuishan, Yinchuan, Yu Quanying, Qing Tongxia and Hong Sibu) in Ningxia, China. Yeast species were identified by sequencing the 26S rRNA D1/D2 region, and strains at the subspecies level were discriminated using tandem repeat-tRNA (TRtRNA) PCR analysis. A total of 524 yeast colonies were isolated, and 19 non-Saccharomyces yeast species belonging to 10 genera were identified, including Aureobasidium pullulans, Cryptococcus albidus, Cryptococcus sp., C. flavescens, C. terrestris, C. magnus, Cystofilobasidium ferigula, Candida zemplinina, Filobasidium magnum, Filobasidium sp., F. elegans, Hanseniaspora uvarum, Metschnikowia pimensis, M. pulcherrima, Naganishia albida, Pichia kluyveri, P. kudriavzevii, Rhodotorula glutinis and R. graminis. Hanseniaspora uvarum, C. zemplinina, and M. pulcherrima were the three most dominated species, while other non-Saccharomyces species were only present in the early stage of spontaneous fermentations at different levels. Further, for the yeast discrimination at strain level, 34 profiles were obtained by amplification with primer pairs TtRNASC/5CAG, while 40 profiles were obtained with primer pairs TtRNASC/ISSR-MB. This study explored the diversity of non-Saccharomyces species in Ningxia, China, and made an important contribution of genetic resources for further strain development. [ABSTRACT FROM AUTHOR]

The emergence and spread of carbapenem-resistant Klebsiella pneumoniae (CRKP) is a serious medical problem worldwide. Acquired OXA-48-like carbapenemases encoded by plasmids are important causes of carbapenem resistance in K. pneumoniae. To explore the links between plasmids and blaOXA-48-like genes in K. pneumoniae, we systematically analyzed the variants of blaOXA-48-like plasmid replicon types, phylogenetic patterns, geographic distribution, conjugative transfer regions, and the genetic environments surrounding blaOXA-48-like of 191 blaOXA-48-like-harboring plasmids, which were identified from 4451 plasmids of K. pneumoniae downloaded from GenBank. Our results showed that seven different variants of blaOXA-48-like genes were identified from the 191 blaOXA-48-like-harboring plasmids in K. pneumoniae, with blaOXA-48, blaOXA-232, and blaOXA-181 being highly prevalent. In K. pneumoniae, blaOXA-48 was mainly carried by the composite transposon Tn1999.2 located on IncL/M-type conjugative plasmids, which were mainly geographically distributed in Switzerland, Germany, and China. In K. pneumoniae, the blaOXA-232 gene was mainly carried by 6.1-kb ColKP3-type mobilizable plasmids, which were mainly isolated in India. In K. pneumoniae, blaOXA-181 was mainly carried by a group of 50-kb ColKP3-IncX3 hybrid conjugative plasmids and a group of small ColKP3-type mobilizable plasmids with lengths of 5.9--9.3 kb, the former was sporadically discovered in China, South Korea, India, and Czech Republic, while the latter was almost all isolated in India. In addition, five blaOXA-245-harboring 65.9-kb IncL plasmids of K. pneumoniae isolated in Spain were found to have the genetic context of blaOXA-245 more complicated than that of blaOXA-48-harboring IncL/M-type plasmids, with two copies of IS1R inserted both upstream and downstream of blaOXA-245-lysR. These findings enhance our understanding of the genetic diversity of blaOXA-48-like-harboring plasmids in K. pneumoniae. [ABSTRACT FROM AUTHOR]

Various physical tweezers for manipulating liquid droplets based on optical, electrical, magnetic, acoustic, or other external fields have emerged and revolutionized research and application in medical, biological, and environmental fields. Despite notable progress, the existing modalities for droplet control and manipulation are still limited by the extra responsive additives and relatively poor controllability in terms of droplet motion behaviors, such as distance, velocity, and direction. Herein, we report a versatile droplet electrostatic tweezer (DEST) for remotely and programmatically trapping or guiding the liquid droplets under diverse conditions, such as in open and closed spaces and on flat and tilted surfaces as well as in oil medium. DEST, leveraging on the coulomb attraction force resulting from its electrostatic induction to a droplet, could manipulate droplets of various compositions, volumes, and arrays on various substrates, offering a potential platform for a series of applications, such as high-throughput surface-enhanced Raman spectroscopy detection with single measuring time less than 20s. [ABSTRACT FROM AUTHOR]

Desktop-as-a-service (DaaS) has been recognized as an elastic and economical solution that enables users to access personal desktops from anywhere at any time. During the interaction process of DaaS, users rely on screen updates to perceive execution results remotely, and thus the reliability and timeliness of screen updates transmission have a great influence on users’ quality of experience (QoE). However, the efficient transmission of screen updates in DaaS is facing severe challenges: most transmission schemes applied in DaaS determine sending strategies in terms of pre-set rules, lacking the intelligence to utilize bandwidth rationally and fit new network scenarios. Meanwhile, they tend to focus on reliability or timeliness and perform unsatisfactorily in ensuring reliability and timeliness simultaneously, leading to lower transmission efficiency of screen updates and users’ QoE when network conditions turn unfavorable. In this article, an intelligent and reliable end-to-end transmission scheme (IRTS) is proposed to cope with the preceding issues. IRTS draws support from reinforcement learning by adopting SARSA, an online learning method based on the temporal difference update rule, to grasp the optimal mapping between network states and sending actions, which extricates IRTS from the reliance on pre-set rules and augments its adaptability to different network conditions.Moreover, IRTS guarantees reliability and timeliness via an adaptive loss recovery method, which intends to recover lost screen updates data automatically with fountain code while controlling the number of redundant packets generated. Extensive performance evaluations are conducted, and numerical results show that IRTS outperforms the reference schemes in display quality, end-to-end delay/delay jitter, and fairness when transferring screen updates under various network conditions, proving that IRTS can enhance the transmission efficiency of screen updates and users’ QoE in DaaS [ABSTRACT FROM AUTHOR]

Cancer is a big challenge that has plagued the human beings for ages and one of the most effective treatments is chemotherapy. However, the low tumor-targeting ability limits the wide clinical application of chemotherapy. The microenvironment plays a critical role in many aspects of tumor genesis. It generates the tumor vasculature and it is highly implicated in the progression to metastasis. To maintain a suitable environment for tumor progression, there are special microenvironment in tumor cell, such as low pH, high level of glutathione (GSH) and reactive oxygen species (ROS), and more special enzymes, which is different to normal cell. Microenvironment-targeted therapy strategy could create new opportunities for therapeutic targeting. Compared to other targeting strategies, microenvironment-targeted therapy strategy will control the drug release into tumor cells more accurately. Redox responsive drug delivery systems (DDSs) are developed based on the high level of GSH in tumor cells. However, there are also GSH in normal cell though its level is lower. In order to control the release of drugs more accurately and reduce side effects, other drug release stimuli have been introduced to redox responsive DDSs. Under the synergistic reaction of two stimuli, redox dual-stimuli responsive DDSs will control the release of drugs more accurately and quickly and even increase the accumulation. This review summarizes strategies of redox dual-stimuli responsive DDSs such as pH, light, enzyme, ROS, and magnetic guide to delivery chemotherapeutic agents more accurately, aiming at providing new ideas for further promoting the drug release, enhancing tumor-targeting and improving anticancer effects. To better illustrate the redox dual-stimuli responsive DDS, preparations of carriers are also briefly described in the review. [ABSTRACT FROM AUTHOR]

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Synthetic Aperture Radar (SAR) raw data simulation is a fundamental problem in radar system design and imaging algorithm research. The growth of surveying swath and resolution results in a significant increase in data volume and simulation period, which can be considered to be a comprehensive data intensive and computing intensive issue. Although several high performance computing (HPC) methods have demonstrated their potential for accelerating simulation, the input/output (I/O) bottleneck of huge raw data has not been eased. In this paper, we propose a cloud computing based SAR raw data simulation algorithm, which employs the MapReduce model to accelerate the raw data computing and the Hadoop distributed file system (HDFS) for fast I/O access. The MapReduce model is designed for the irregular parallel accumulation of raw data simulation, which greatly reduces the parallel efficiency of graphics processing unit (GPU) based simulation methods. In addition, three kinds of optimization strategies are put forward from the aspects of programming model, HDFS configuration and scheduling. The experimental results show that the cloud computing based algorithm achieves 4 x speedup over the baseline serial approach in an 8-node cloud environment, and each optimization strategy can improve about 20%. This work proves that the proposed cloud algorithm is capable of solving the computing intensive and data intensive issues in SAR raw data simulation, and is easily extended to large scale computing to achieve higher acceleration. [ABSTRACT FROM AUTHOR]

A series of random copolypeptides, i.e. poly(-propyl-l-glutamate)-graft-(oligo-ethylene-glycol)-random-poly(γ-benzyl-l-glutamate)s (PPLG-g-OEG3-ran-PBLG) with similar main chain lengths and various compositions of OEG and benzyl pendants were synthesized in three steps, including ring-opening polymerization of γ-chloropropyl-l-glutamic acid-based N-carboxyanhydride (CPLG-NCA) and γ-benzyl-l-glutamic acid-based N-carboxyanhydride (BLG-NCA), nucleophilic substitution in the presence of NaN3, and copper-mediated alkyne-azide 1,3-dipolar cycloaddition. ¹H NMR, Fourier transform infrared spectroscopy, and gel permeation chromatography results confirmed the molecular structures of the resulting copolypeptides and characterized their molar masses, molar mass distributions, and the OEG/benzyl compositions. Fourier transform infrared spectroscopy and circular dichroism analysis revealed that PPLG-g-OEG3-ran-PBLG samples adopted a-helical conformations both in aqueous solution and solid state. Variable-temperature UV-visible spectroscopy revealed that PPLG-g-OEG3-ran-PBLG samples with high OEG molar content (x ≥ 0.57) possessed lower critical solution temperature-type phase transitions in water. The cloud point temperature, in the range of 22-53°C, can be readily obtained by controlling the OEG/benzyl composition. [ABSTRACT FROM AUTHOR]

A copper-catalyzed domino reaction between itaconate esters and diethyl zinc (or silane) is developed, affording itaconate dimerization products, multi-ester-substituted cyclopentanones, in moderate to high yields. [ABSTRACT FROM AUTHOR]

The development of acquired drug resistance is the primary cause of chemotherapy failure in the treatment of ovarian cancer. To examine the mechanism underlying Taxol (TAX) resistance in ovarian cancer and attempt to reverse it, the present study induced a TAX-resistant ovarian cancer cell line SKOV3/TAX using a gradient concentration increment method. The properties of the resistant cell line were initially investigated by proliferation, colony formation, adhesion and cell cycle analysis compared with control SKOV3 cells. To examine the mechanism, the expression of p53 upregulated modulator of apoptosis (PUMA) was compared between SKOV3/TAX and SKOV3 cells by western blot analysis. An adenovirus expressing p53 (Ad-p53), alone or in combination with TAX, was used to treat the drug-resistant ovarian cancer cells SKOV3/TAX. The effects of Ad-p53 on pro-apoptosis and the reversal of drug resistance were evaluated using flow cytometric analysis, cleaved-poly ADP-ribose polymerase detection, microscopic observation and MTT measurement. Compared with the control cells, the TAX-resistant ovarian cancer cell line SKOV3/TAX was characterized by reduced sensitivity to TAX treatment, a significantly slower proliferation rate, higher colony-forming efficiency and higher adhesion ability. However, no significant difference in cell cycle distribution was identified. PUMA, a potent pro-apoptotic protein, was markedly suppressed in the SKOV3/TAX cells. Ad-p53 infection stimulated the upregulation of PUMA and re-sensitized the resistant ovarian cancer cells to TAX by an apoptotic mechanism. Therefore, Ad-p53 infection is an effective gene therapy method to re-sensitize the resistant ovarian cancer cells to TAX by restoring the expression of PUMA. [ABSTRACT FROM AUTHOR]

Chronic exposure to coplanar polychlorinated biphenyls (PCBs), a potent inducer of toxic reactive oxygen species (ROS), in the environment and food can cause liver diseases. It remains unknown whether caffeic acid derivatives (CADs) exerted protective effect on PCB-induced hepatotoxicity. We sought to evaluate the activities of 3 CADs on PCB169-induced oxidative stress and DNA damage in the liver. Male ICR mice were administered with 1 mmol/mL PCB169 at 5 mL/kg body weight for 2 weeks. The mice were given CADs by gastric gavage for 3 weeks. We found that PCB169 decreased the growth rate and reduced the levels of superoxide dismutase (SOD), glutathione (GSH) and GSH peroxidase (GPx). It increased the liver weight, malondialdehyde (MDA) and 8-hydroxy-29-deoxyguanosine (8-OHdG) levels and CYP1A1 activity in the liver tissues and plasma of mice (P<0.05). Pretreatment of mice with CADs restored the above parameters to normal levels. There was a synergistic protective effect between CADs in preventing MDA and 8-OHdG formation and inducing CYP1A1 and phase II metabolism enzyme (SOD, GPx) activities (P<0.05). In conclusion, PCB169 induced hepatotoxicity and pretreatment with CADs had synergistic protective effects on liver damage. [ABSTRACT FROM AUTHOR]

This paper presents a compact ultra-wideband strip helical antenna with circular polarization. In order to achieve circular polarization and impedance matching with helix of 1.1 turns, the helix is made of uniform metallic strip instead of traditional metallic wire. Considering the convenience in manufacture, the uniform metallic strip is firstly printed on a substrate with εr = 2:2, h = 0:5 mm, then the substrate is rolled into the shape of cylinder such that a helix is formed. A 50Ω coaxial cable is directly connected to the helix without an impedance matching section. The ground plane, which is printed on another substrate with εr = 2:2, h = 3 mm, is placed under the helix. To demonstrate this method, a 1.1-turns helical antenna is fabricated, measured and analyzed. Measured results show that the proposed antenna has an impedance bandwidth (S11 ≤ -10 dB) of more than 70%, and an axial ratio (AR) bandwidth (AR ≤ 3 dB) of 55%. These wideband circular polarized (CP) characteristics indicate that the proposed antenna has a potential application in wide-band/multi-band wireless communications. [ABSTRACT FROM AUTHOR]

The performance of copper ion removal using sodium dodecyl sulfate (SDS) and its mixtures with Brij 35, Tween 80 (TW80) and Triton X-100 (TX100) by micellar-enhanced ultrafiltration (MEUF) was investigated. The effects of the molar ratio of nonionic surfactant to SDS on the critical micelle concentration (CMC) of SDS/Brij 35, SDS/TW80 and SDS/TX100, the removal efficiency of Cu2+, the residual concentration of SDS in the permeate solution and the permeate flux were tested. The results showed that the CMCs of the mixed surfactants were sharply less than that of pure SDS. The removal efficiencies of Cu2+ were up to the maximum values 98.3 and 95.8% when the molar ratios of Brij 35 and TW80 to SDS were 0.3, and it was 93.5% given 0.7 molar ratio of TX100 to SDS. The concentration of SDS in the permeate decreased dramatically with the addition of nonionic surfactant, and the permeate flux decreased slightly as the molar ratio increased. Compared with the performance by single SDS, the mixed SDS/Brij 35, SDS/TW80 and SDS/TX100 at an optimum composition could result in not only higher rejection of Cu2+ but also much less dosage of surfactant and concentration of SDS in the permeate. [ABSTRACT FROM AUTHOR]

In this paper, a GPU-based high-resolution multiview rendering approach (HRMVRA) is presented and incorporated into Chromium, and then a tiled multi-projector autostereoscopic display system (TMPADS) based on HRMVRA is constructed to provide an immersing 3D perception and a compelling sense of presence without the need of glasses for viewers. HRMVRA renders the multiview images in real time in only one pass, though the traditional multiview rendering approaches based on Chromium render the multiviews in multiple passes. The hardware of the autostereoscopic display system consists of a front-projection screen that covers an area of 360×160 square centimeters, twenty four projectors and thirteen computers connected with the gigabit Ethernet. TMPADS is well scalable since both the resolution and the number of the rendered views are configurable. It is shown by the experiments that HRMVRA has more than five times performance of the traditional high-resolution multiview parallax rendering based on Chromium. Most existing single-view OpenGL applications (e.g., some games like Quake III) can run directly on TMPADS without any source-code modification or re-compiling. [ABSTRACT FROM AUTHOR]